RadishBase

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Alignment for radish unigene UN22072

               -1     -     49
UN22072        --> ..ATGTGTTAAAATTTTATTTCAGTAACAGTGAAATAAGCAAATGCCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914176       <-- ...............................tttttgAGCAAATGCCCTC
EY924209       <-- ......................................GCAAATGCCCTC
EV552376       <-- ..................................................
EY946996       <-- ..................................................
EX770727       <-- ..................................................
FD946420       <-- ..................................................
EY898087       <-- ..................................................
FD557479       <-- ..................................................
EW733994       <-- ..................................................
EX895347       <-- ..................................................
EX896927       <-- ..................................................
EX894496       <-- ..................................................
FD970898       <-- ..................................................
EY906530       <-- ..................................................
EX898527       --> agATGTGTTAAAATTTTATTTCAGTAACAGTGAAATAAGCAAATGCCCTC
FY429459       --> .gaaggggTAAAATTTTATTTCAGTAACAGTGAAATAAGCAAATGCCCTC
EX900779       --> .....................CAGTAACAGTGAAATAAGCAAATGCCCTC
EY894240       --> .....................ccGTAACAGTGAAATAAGCAAATGCCCTC
EV547304       --> ..................................................
EY910272       --> ..................................................
FD942544       --> ..................................................
EY942982       --> ..................................................
EW739198       --> ..................................................

               49     -     99
UN22072        --> TTGGCAAAAAGAACGTACACTTTTAGGCCAAATCAGAACAAAAGAAACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914176       <-- TTGGCAAAAAGAACGTACACTTTTAGGCCAAATCAGAACAAAAGAAACAC
EY924209       <-- ACGGCAAAAAGAACGTACACTTTTATGCCAAATCAGAACAAAAGAAACAC
EV552376       <-- ....CAAAAAGAACGTACACTTTTAGGCCAAATCAGAACAAAAGAAACAC
EY946996       <-- ..........ggACGTACACTTTTACGCCAAATCAGAACAAAAGAAACAC
EX770727       <-- ..................................................
FD946420       <-- ..................................................
EY898087       <-- ..................................................
FD557479       <-- ..................................................
EW733994       <-- ..................................................
EX895347       <-- ..................................................
EX896927       <-- ..................................................
EX894496       <-- ..................................................
FD970898       <-- ..................................................
EY906530       <-- ..................................................
EX898527       --> TTGGCAAAAAGAACGTACACTTTTAGGCCAAATCAGAACAAAAGAAACAC
FY429459       --> TTGGCAAAAAGAACGTACACTTTTACGCCAAATCAGAACAAAAGAAACAC
EX900779       --> TTGGCAAGAAGAACGTACACTTTTAGGCCAAATCAGAACAAAAGAAACAC
EY894240       --> TTGGCAAAAAGAACGTACACTTTTAGGCCAAATCAGAACAAAAGAAACAC
EV547304       --> ....CAAAAAGAACGTACACTTTTAGGCCAAATCAAAACAAAAGAAACAC
EY910272       --> ....CAAAAAGAACGTACACTTTTAGGCCAAATCAGAACAAAAGAAACAC
FD942544       --> ......AAAAGAACGTACACTTTTAGGCCAAATCAGAACAAAAGAAACAC
EY942982       --> ..........ggACGTACACTTTTACGCCAAATCAGAACAAAAGAAACAC
EW739198       --> ..................................................

               99     -    149
UN22072        --> AGAAGTCATTTAGCAAAAGCAAGAAACACAATGTCATAGA--CAAAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914176       <-- AGAAGTCATTTAGCAAAAGCAAGAAACACAATGTCATAGA--TAAAGAAG
EY924209       <-- AGAAGTCATTTAGCAAAAGCAAGAAA---CATGTCATAGAGACAAAGAAG
EV552376       <-- AGAAGTCATTTAGCAAAAGCAAGAAACACAATGTCATAGA--CAAAGAAG
EY946996       <-- AGAAGTCATTTAGCAAAAGCAAGAAACACAATGTCATAGA--CAAAGAAG
EX770727       <-- ..................................................
FD946420       <-- ..................................................
EY898087       <-- ..................................................
FD557479       <-- ..................................................
EW733994       <-- ..................................................
EX895347       <-- ..................................................
EX896927       <-- ..................................................
EX894496       <-- ..................................................
FD970898       <-- ..................................................
EY906530       <-- ..................................................
EX898527       --> AGAAGTCATTTAGCAAAAGCAAGAAACACAATGTCATAGA--CAAAGAAG
FY429459       --> AGAAGTCATTTAGCAAAAGCAAGAAACACAATGGCATAGA--CAAAGAAG
EX900779       --> AGAAGTCATTTAGCAAAAGCAAGAAACACAATGTCATAGA--CAAAGAAG
EY894240       --> AGAAGTCATCTAGCAAAAGCAAGAAACACAATGTCATAGA--CAAAGAAA
EV547304       --> AGAAGTCATTTAGCAAAAGCAAGAAACACAATGTCATAAA--CAAAGAAA
EY910272       --> AGAAGTCATTTAGCAAAAGCAAGAAACACAATGTCATAGA--TAAAGAAG
FD942544       --> AGAAGTCATTTAGCAAAAGCAAGAAACACAATGTCATAGA--CAAAGAAG
EY942982       --> AGAAGTCATTTAGCAAAAGCAAGAAACACAATGTCATAGA--CAAAGAAG
EW739198       --> ..................................................

               149    -    199
UN22072        --> ACACGCCCACATATCATGACGGCTTGTAGTATTTGGTAGCCACGAACGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914176       <-- ACACGCCCACATATCATGACGGCTTGTAGTATTTGGTAGCCACGAACGGC
EY924209       <-- A--CGCCCACATATCATGACGGCTTGTAGTATTTGGTAGCCACGAACGGC
EV552376       <-- ACACGCCCACATATCATGACGGCTTGTAGTATTTGGTAGCCACGAACGGC
EY946996       <-- ACACGCCCACATATCATGACGGCTTGTAGTATTTGGTAGCCACGAACGGC
EX770727       <-- ..................................................
FD946420       <-- ..................................................
EY898087       <-- ..................................................
FD557479       <-- ..................................................
EW733994       <-- ..................................................
EX895347       <-- ..................................................
EX896927       <-- ..................................................
EX894496       <-- ..................................................
FD970898       <-- ..................................................
EY906530       <-- ..................................................
EX898527       --> ACACGCCCACATATCATGACGGCTTGTAGTATTTGGTAGCCACGAAAGGC
FY429459       --> ACACGCCCACATATCATGACGGCTTGGAGTATTTGGTAGCCACGAACGGC
EX900779       --> ACACGCCCACATATCATGACGGCTTGTAGTATTTGGTAGCCACGAACGGC
EY894240       --> ACACGCCCACATATCATGACGGCTTGTAGTATTTGGTAGCCACGAACGGC
EV547304       --> ACACGCCCACATATCATGACGGCTTGTAGTATTTGGTAGCCACGAACGGC
EY910272       --> ACACGCCCACATATCATGACGGCTTGTAGTATTTGGTAGCCACGAACGGC
FD942544       --> ACGCGCCCACATATCATGACGGCTTGTAGTATTTGGTAGCCACGAACGGC
EY942982       --> ACACGCCCACATATCATGACGGCTTGTAGTATTTGGTAGCCACGAACGGC
EW739198       --> ..............CATGACGGCTTGTAGTATTTGGTAGCCACGAACGGC

               199    -    249
UN22072        --> ATCTTAGTGATGTTGCCTTCATAAGGTTTCCCACGGACCAAGATCTTGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914176       <-- ATCTTAGTGATGTTGCCTTCATAAGGTTTCCCACGGACCAAGATCTTGAC
EY924209       <-- ATCTTAGTGATGTTGCCTTCATAAGGTTTCCCACGGACCAAGATCTTGAC
EV552376       <-- ATCTTAGTGATGTTGCCTTCATAAGGCTTCCCACGGACCAAGATCTTGAC
EY946996       <-- ATCTTAGTGATGTTGCCTTCATAAGGTTTCCCACGGACCAAGATCTTGAC
EX770727       <-- ....................ATAAGGTTTCCCACGGACCAAGATCTTGAC
FD946420       <-- ..................................................
EY898087       <-- ..................................................
FD557479       <-- ..................................................
EW733994       <-- ..................................................
EX895347       <-- ..................................................
EX896927       <-- ..................................................
EX894496       <-- ..................................................
FD970898       <-- ..................................................
EY906530       <-- ..................................................
EX898527       --> ATCTTAGTGATGTTGCCTTCATAAGGTTTCCCACGGACCAAGATCTTGAC
FY429459       --> ATCTTAGTGATGTTGCCTTCATAAGGGTTCCCACGGACCAAGATCTTGAC
EX900779       --> ATCTTAGTGATGTTGCCTTCATAAGGTTTCCCACGGACCAAGATCTTGAC
EY894240       --> ATCTTAGTGATGTTGCCTTCATAAGGTTTCCCACGGACCAAGATCTTGAC
EV547304       --> ATCTTAGTGATGTTGCCTTCATAAGGCTTCCCACGGACCAAGATCTTGAC
EY910272       --> ATCTTAGTGATGTTGCCTTCATAAGGTTTCCCACGGACCAAGATCTTGAC
FD942544       --> ATCTTAGTGATGTTGCCTTCATAAGGTTTCCCACGGACCAAGATCTTGAC
EY942982       --> ATCTTAGTGATGTTGCCTTCATAAGGTTTCCCACGGACCAAGATCTTGAC
EW739198       --> ATCTTAGTGATGTTGCCTTCATAAGGTTTCCCACGGACCAAGATCTTGAC

               249    -    299
UN22072        --> TTTGGTCCCGTTCTTGTGCTGACCCGACTTAACATACCCCATAGCTATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914176       <-- TTTGGTCCCGTTCTTGTGCTGACCCGACTTAACATACCCCATAGCTATGT
EY924209       <-- TTTGGTCCCGTTCTTGTGCTGACCCGACTTAACATACCCCATAGCTACGT
EV552376       <-- TTTGGTCCCGTTCTTGTGCTGACCCGACTTAACATACCCCATAGCTATGT
EY946996       <-- TTTGGTCCCGTTCTTGTGCTGACCCGACTTAACATACCCCATAGCTATGT
EX770727       <-- TTTGGTCCCGTTCTTGTGCTGACCCGACTTAACATACCCCATAGCTATGT
FD946420       <-- ..................................................
EY898087       <-- ..................................................
FD557479       <-- ..................................................
EW733994       <-- ..................................................
EX895347       <-- ..................................................
EX896927       <-- ..................................................
EX894496       <-- ..................................................
FD970898       <-- ..................................................
EY906530       <-- ..................................................
EX898527       --> TTTGGTCCCGTTCTTGTGCTGACCCTACTTAACATACCCCATAGCTATGT
FY429459       --> TTTGGGCCCGTTCTTGGGCTGACCCGACTTAACATACCCCATAGCTATGT
EX900779       --> TTTGGTCCCGTTCTTGTGCTGACCCGACTTAACATGCCCCATAGCTATGT
EY894240       --> TTTGGTCCCGTTCCTGTGCTGACCCGACTTAACATACCCCATAGCTATGT
EV547304       --> TTTGGTCCCGTTCTTGTGCTGACCCGACTTAACATACCCCATAGCTATGT
EY910272       --> TTTGGTCCCGTTCTTGTGCTGACCCGACTTAACATACCCCATAGCTATGT
FD942544       --> TTTGGTCCCGTTCTTGTGCTGACCCGACTTAACATACCCCATAGCTATGT
EY942982       --> TTTGGTCCCGTTCTTGTGCTGACCCGACTTAACATACCCCATAGCTATGT
EW739198       --> TTTGGTCCCGTTCTTGTGCTGACCCGACTTAACATACCCCATAGCTATGT

               299    -    349
UN22072        --> TCTTCTTCAAGTTGGGACTAAACCCACCACTCGTGATCTCTCCAATCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914176       <-- TCTTCTTCAAGTTGGGACTAAACCCACCACTCGTGATCTCTCCAATCTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY924209       <-- TCTTCTTCAAGTTGGGACTAAACCCACCGCTCGTGATCTCTCCAATCTTG  Raphanus raphanistrum subsp. landra
EV552376       <-- TCTTCTTCAAGTTGGGACTAAACCCACCACTCGTGATCTCTCCAATCTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY946996       <-- TCTTCTTCAAGTTGGGACTAAACCCACCACTCGTGATCTCTCCAATCTTG  Raphanus sativus cv Rat-Tail Radish #3870
EX770727       <-- TCTTCTTCAAGTTGGGACTAAACCCACCGCTCGTGATCTCTCCAATCTTG  Raphanus raphanistrum subsp. landra
FD946420       <-- .......CAAGTTGGGACTAAACCCACCGCTCGTGATCTCTCCAATCTTG  Raphanus sativus cv Early Scarlet Globe
EY898087       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD557479       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW733994       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX895347       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX896927       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX894496       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD970898       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906530       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX898527       --> TCTTCTTCAAGTTGGGACTAAACCCACCGCTCGTGATCTCTCCAATCTTG  Raphanus sativus cv Early Scarlet Globe
FY429459       --> TCTTCTTCAAGTTGGGACTAAACCCACCACTCGGGATCTCTCCAATCTTG  Raphanus sativus cv GSK3-1
EX900779       --> TCTTCTTCAAGTTGGGACTAAACCCACCGCTCGTGATCTCTCCAATCTTG  Raphanus sativus cv Early Scarlet Globe
EY894240       --> TCTTCTTCAAGTTGGGACTAAACCCACCACTCGTGATCTCTCCAATCTTG  Raphanus raphanistrum subsp. maritimus
EV547304       --> TCTTCTTCAAGTTGGGACTAAACCCACCACTCGTGATCTCTCCAATCTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY910272       --> TCTTCTTCAAGTTGGGACTAAACCCACCACTCGTGATCTCTCCAATCTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD942544       --> TCTTCTTCAAGTTGGGACTAAACCCACCGCTCGTGATCTCTCCAATCTTG  Raphanus sativus cv Early Scarlet Globe
EY942982       --> TCTTCTTCAAGTTGGGACTAAACCCACCACTCGTGATCTCTCCAATCTTG  Raphanus sativus cv Rat-Tail Radish #3870
EW739198       --> TCTTCTTCAAGTTGGGACTAAACCCACCACTCGTGATCTCTCCAATCTTG  Raphanus sativus cv Rat-Tail Radish #3870

               349    -    399
UN22072        --> TTACCACTCTCATCATGCACCTCGCTATGCGACCTCGCTGGTGGTCCCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914176       <-- TTACCCCTCTCATCATGCACCTCGCTATGCGACCTCGCTGGTGGTCCCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY924209       <-- TTACCACTCTCATCATGCACCTCGCTATGCGACCTTGCTGGTGGTCCCGA  Raphanus raphanistrum subsp. landra
EV552376       <-- TTACCACTCTCATCATGCACCTCGCTATGCGACCTTGCTGGTGGTCCCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY946996       <-- TTACCACTCTCATCATGCACCTCGCTATGCGACCTCGCTGGTGGTCCCGA  Raphanus sativus cv Rat-Tail Radish #3870
EX770727       <-- TTACCACTCTCATCATGCACCTCGTTATGCGACCTTGCTGGTGGTCCCGA  Raphanus raphanistrum subsp. landra
FD946420       <-- TTACCACTCTCATCGTGCACCTCGCTATGCGACCTCGCTGGTGGTCCCGA  Raphanus sativus cv Early Scarlet Globe
EY898087       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD557479       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW733994       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX895347       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX896927       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX894496       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD970898       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906530       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX898527       --> TTACCACTCTCATCGTGCACCTCGCTATGCGACCTCGCTGGCGGTCCCGA  Raphanus sativus cv Early Scarlet Globe
FY429459       --> GTACCACTCTCATCATGCACCTCGCTATGCGACCTCGCTGGGGGTCCCGA  Raphanus sativus cv GSK3-1
EX900779       --> TTACCACTCTCATCGTGCACCTCGCTATGCGACCTCGCTGGTGGTCCCGA  Raphanus sativus cv Early Scarlet Globe
EY894240       --> TTACCACTCTCATCATGCACCTCGCTATGCGACCTCGCTGGTGGTCCCGA  Raphanus raphanistrum subsp. maritimus
EV547304       --> TTACCACTCTCATCATGCACCTCGCTATGCGACCTTGCTGGTGGTCCCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY910272       --> TTACCCCTCTCATCATGCACCTCGCTATGCGACCTCGCTGGTGGTCCCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD942544       --> TTACCACTCTCATCGTGCACCTCGCTATGCGACCTCGCTGGTGGTCCCGA  Raphanus sativus cv Early Scarlet Globe
EY942982       --> TTACCACTCTCATCATGCACCTCGCTATGCGACCTCGCTGGTGGTCCCGA  Raphanus sativus cv Rat-Tail Radish #3870
EW739198       --> TTACCACTCTCATCATGCACCTCGCTATGCGACCTCGCTGGGGGTCCCGA  Raphanus sativus cv Rat-Tail Radish #3870

               399    -    449
UN22072        --> AGAGAAGAATCCAACCCTTCTGATCGTTGGTCCATCTTGAAGCTGTTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914176       <-- AGAGAAGAATCCAACCCTTCTGATCGTTGGTCCATCTTGAAGCTGTTTGA
EY924209       <-- AGAGAAGAATC-AACCCTTCTGATCGTTGGTCCATCTTGAAGCTGTTTGA
EV552376       <-- AGAGAAGAATCCAACCCTTCTGATCGTTGGTCCATCTTGAAGCTc.....
EY946996       <-- AGAGAAGAATCCAACCCTTCTGATCGTTGGTCCATCTTGAAGCTGTTTGA
EX770727       <-- AGAGAAGAATCCAACCCTTCTGATCGTTGGTCCATCTTGAAGCTGTTTGA
FD946420       <-- GGAGAAGAATCCAACCTTTCTGATCGTTGGTCCATCTTGAAGCTGTTTGA
EY898087       <-- ..................................................
FD557479       <-- ..................................................
EW733994       <-- ..................................................
EX895347       <-- ..................................................
EX896927       <-- ..................................................
EX894496       <-- ..................................................
FD970898       <-- ..................................................
EY906530       <-- ..................................................
EX898527       --> AGAGAAGAATCCAACCCTTCTGATCGTTGGTCCATCTTGAAACTGTTTGA
FY429459       --> AGAGAAGAATCCAACCCTTCTGATCGTTGGGCCATCTTGAAGCTGTTTGA
EX900779       --> AGAGAAGAATCCAACCCTTCTGATCGTTGGTCCATCTTGAAGCTGTTTGA
EY894240       --> AAAGAA............................................
EV547304       --> AAAAAAAAATCCAACCCTTCTGATCGTTGGTCCATCTTGAAGCTc.....
EY910272       --> AGAGAAGAATCCAACCCTTCTGATCGTTGGTCCATCTTGAAGCTGTTTGA
FD942544       --> GGAGAAGAATCCAACCCTTCTGATCGTTGGTCCATCTTGAAGCTGTTTGA
EY942982       --> AGAGAAGAATCCAACCCTTCTGATCGTTGGTCCATCTTGAAGCTGTTTGA
EW739198       --> AGAGAAGAATCCAACCCTTCTGATCGTTGGTCCATCTTGAAGCTGTTTGA

               449    -    499
UN22072        --> GGATCACATCCGCTCCAAGAAACCCTCCTTCGGCTCTTCTACGCTTACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914176       <-- GGATCACATCAGCTCCGAGAAACCCTCCTTCCGCTCTTCTACGCTTACCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY924209       <-- GGATCACATCAGCTCCGAGAAACCCTCCTTCGGCTCTTCTACGTTTACCT  Raphanus raphanistrum subsp. landra
EV552376       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY946996       <-- GGATCACATCCGCTCCAAGAAACCCTCCTTCGGCTCTTCTACGCTTACCT  Raphanus sativus cv Rat-Tail Radish #3870
EX770727       <-- GGATCACATCAGCTCCGAGAAACCCTCCTTCGGCTCTTATACGCTTACCT  Raphanus raphanistrum subsp. landra
FD946420       <-- GGATCACATCCGCTCCAAGAAACCCTCCTTCGGCTCTTCTACGCTTACCT  Raphanus sativus cv Early Scarlet Globe
EY898087       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD557479       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW733994       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX895347       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX896927       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX894496       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD970898       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906530       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX898527       --> GGATCACATCCGCTCCAAGAAACCCTCCTTCGGCTCTTCTACGCTTACCT  Raphanus sativus cv Early Scarlet Globe
FY429459       --> GGATCACATCCGCTCCAAGAAACCCTCCTTCGGCTCTTCTACGCTTACCT  Raphanus sativus cv GSK3-1
EX900779       --> GGATCACATCCGCTCCAAGAAACCCTCCTTCGGCTCTTCTACGCTTACCT  Raphanus sativus cv Early Scarlet Globe
EY894240       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV547304       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY910272       --> GGATCACATCAGCTCCGAGAAACCCTCCTTCCGCTCTTCTACGCTTACCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD942544       --> GGATCACATCCGCTCCAAGAAACCCTCCTTCGGCTCTTCTACGCTTACCT  Raphanus sativus cv Early Scarlet Globe
EY942982       --> GGATCACATCCGCTCCAAGAAACCCTCCTTCGGCTCTTCTACGCTTACCT  Raphanus sativus cv Rat-Tail Radish #3870
EW739198       --> GGATCACATCAGCTCCGAGAAACCCTCCTTCCGCTCTTCTACGCTTACCT  Raphanus sativus cv Rat-Tail Radish #3870

               499    -    549
UN22072        --> ATGGCCCATGTCAGCCCAGCTTCGACAGGAGAAA-TGTGTTGCTCCATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914176       <-- ATGGCCCATGTCAGCCCAGCTTCGACAGGAGAAA-TGTGTTGCTCCATGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY924209       <-- ATGGCCCATGTGAGTCCAGCTTCGACAGGAGAAA-TGTGTTGCTCCATGT  Raphanus raphanistrum subsp. landra
EV552376       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY946996       <-- ATGGCCCATGTCAGCCCAGCTTCGACAGGAGAAA-TGTGTTGCTCCATGT  Raphanus sativus cv Rat-Tail Radish #3870
EX770727       <-- ATGGCCCATGTGAGTCCAGCTTCGACAGGAGAAA-TGTGTTGCTCCATGT  Raphanus raphanistrum subsp. landra
FD946420       <-- ATGGCCCATGTGAGTCCAGCTTCGACAGGAGAAA-TGTGTTGCTCCATGT  Raphanus sativus cv Early Scarlet Globe
EY898087       <-- ..GGCCCATGTCAGCCCAGCTTCGACAGGAGAAAATGTGTTGCTCCATGT  Raphanus raphanistrum subsp. maritimus
FD557479       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW733994       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX895347       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX896927       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX894496       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD970898       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906530       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX898527       --> ATGGCCCATGTGAGTCCAGCTTCGACAGGAGAAA-TGTGTTGCTCCATGT  Raphanus sativus cv Early Scarlet Globe
FY429459       --> ATGGCCCATGTCAGCCCAGCTTCGACAGGAGAAA-TGTGTTGCTCCATGT  Raphanus sativus cv GSK3-1
EX900779       --> ATGGCCCATGTGAGTCCAGCTTCGACAGGAGAAA-TGTGTTGCTCCATGT  Raphanus sativus cv Early Scarlet Globe
EY894240       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV547304       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY910272       --> ATGGCCCATGTCAGCCCAGCTTCGACAGGAGAAA-TGTGTTGCTCCATGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD942544       --> ATGGCCCATGTGAGTCCAGCTTCGACAGGAGAAA-TGTGTTGCTCCATGT  Raphanus sativus cv Early Scarlet Globe
EY942982       --> ATGGCCCATGTCAGCCCAGCTTCGACAGGAGAAA-TGTGTTGCTCCATGT  Raphanus sativus cv Rat-Tail Radish #3870
EW739198       --> ATGGCCCATGTCAGCCCAGCTTCGACAGGAGAAA-TGTGTTGCTCCATGT  Raphanus sativus cv Rat-Tail Radish #3870

               549    -    599
UN22072        --> CATTGCCGTAGAGACAAAGCCCTGCTTCTAGCCTCAGACTGTCTCTTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914176       <-- CATTGCCGTAGAGACAAAGCCCTGCTTCTAGCCTCAGACTGTCTCTTGCT
EY924209       <-- CGTTGCCGTAGAGACAAAGCCCTGCTTCTAGCCTCAGACTGTCTCTTGCT
EV552376       <-- ..................................................
EY946996       <-- CATTGCCGTAGAGACAAAGCCCTGCTTCTAGCCTCAGACTGTCTCTTGCT
EX770727       <-- CATTGCCGTAGAGACAAAGCCCTGCTTCTAGCCTCAGACTGTCTCTTGCT
FD946420       <-- CATTGCCGTAGAGACAAAGCCCTGCTTCTAGCCTCAGACTGTCTCTTGCT
EY898087       <-- CATTGCCGTAGAGACAAAGCCCTGCTTCTAGCCTCAGACTGTCTCTTGCT
FD557479       <-- ..................................................
EW733994       <-- ..................................................
EX895347       <-- ..................................................
EX896927       <-- ..................................................
EX894496       <-- ..................................................
FD970898       <-- ..................................................
EY906530       <-- ..................................................
EX898527       --> CATTGCCGTAGAGACAAAGCCCTGCTTCTAGCCTCAGACCGTCTCTTGCT
FY429459       --> CATTGCCGTAGAGACAAAGCCCTGCTTCTAGCCTCAGACTGTCTCTTGCT
EX900779       --> CATTGCCGTAAAGACAAAGCCCTGCTTCTAGCCTCAGACTGTCTCTTGCT
EY894240       --> ..................................................
EV547304       --> ..................................................
EY910272       --> CATTGCCGTAGAGACAAAGCCCTGCTTCTAGCCTCAGACTGTCTCTTGCT
FD942544       --> CATTGCCGTAGAGACAAAGCCCTGCTTCTAGCCTCAGACTGTCTCTTGCT
EY942982       --> CATTGCCGTAGAGACAAAGCCCTGCTTCTAGCCTCAGACTGTCTCTTGCT
EW739198       --> CATTGCCGTAGAGACAAAGCCCTGCTTCTAGCCTCAGACTGTCTCTTGCT

               599    -    649
UN22072        --> CCTAGACCTGTGAGCCTTACTTTTCCCTCGGATTTCTCCAAGATTGCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914176       <-- CCTAGACCTGTGAGCCTTACTTTTCCCTCGGATTTCTCCAAGATTGCTTT
EY924209       <-- CCTAGACCTGTGAGCCTTACTTTTCCCTCGGATTTCTCCAAGATTGCTTT
EV552376       <-- ..................................................
EY946996       <-- CCTAGACCTGTGAGCCTTACTTTTCCCTCGGATTTCTCCAAGATTGCTTT
EX770727       <-- CCTAGACCTGTGAGCCTTACTTTTCCCTCGGATTTCTCCAAGATTGCTTT
FD946420       <-- CCTAGACCTGTGAGCCTTACTTTTCCCTCGGATTTCTCCAAGATTGCTTT
EY898087       <-- CCTAGACCTGTGAGCCTTACTTTTCCCTCGGATTTCTCCAAGATTGCTTT
FD557479       <-- .............gagtctacTTTCCCTCGGATT-CTCCAAGACTGCTTT
EW733994       <-- ..................................................
EX895347       <-- ..................................................
EX896927       <-- ..................................................
EX894496       <-- ..................................................
FD970898       <-- ..................................................
EY906530       <-- ..................................................
EX898527       --> CCTAGACCTGTGAGCCTTACTTTTCCCTCGGATTTCTCCAAGATTGCTTT
FY429459       --> CCTAGACCTGTGAGCCTTACTTTTCCCTCGGATTTCTCCAAGATTGCTTT
EX900779       --> CCTAGACCTGTGAGCCTTACTTTTCCCTCGGATTTCTCCAAGATTGCTTT
EY894240       --> ..................................................
EV547304       --> ..................................................
EY910272       --> CCTAGACCTGTGAGCCTTACTTTTCCCTCGGATTTCTCCAAGATTGCTTT
FD942544       --> CCTAGACCTGTGAGCCTTACTTTTCCCTCGGATTTCTCCAAGATTGCTTT
EY942982       --> CCTAGACCTGTGAGCCTTACTTTTCCCTCGGATTTCTCCAAGATTGCTTT
EW739198       --> CCTAGACCTGTGAGCCTTACTTTTCCCTCGGATTTCTCCAAGATTGCTTT

               649    -    699
UN22072        --> GGCTAAATCAACTGCATGCTCCGATGGAACCGAGATCTCAAACCCATCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914176       <-- GGCTAAATCAACTGCATGCTCCGATGGAACCGAGATCTCAAACCCATCTT
EY924209       <-- GGCTAAATCAACTGCATGCTCCGATGGAACCGAGATCTCAAACCCATCTT
EV552376       <-- ..................................................
EY946996       <-- GGCTAAATCAACTGCATGCTCCc...........................
EX770727       <-- GGCTAAATCAACTGCATGCTCCGATGGAACCGAGATCTCAAACCCATCTT
FD946420       <-- GGCTAAATCAACTGCATGCTCCGATGGAACCGAGATCTCAAACCCATCTT
EY898087       <-- GGCTAAATCAACTGCATGCTCCGATGGAACCGAGATCTCAAACCCATCTT
FD557479       <-- GACTAA-TCAACTGCATGCTCCGATG-AACCGAGATCTCAAACCCATCT-
EW733994       <-- ..................................................
EX895347       <-- ..................................................
EX896927       <-- ..................................................
EX894496       <-- ..................................................
FD970898       <-- ..................................................
EY906530       <-- ..................................................
EX898527       --> GGCTAAATCAACTGCATGCTCCGATGGAACCGAGATCTCAAACCCATCTT
FY429459       --> GGCTAAATCAACTGCATGCTCCGATGGAACCGAGATCTCAAACCCATCTT
EX900779       --> GGCTAAATCAACTGCATGCTCCGATGGAACCGAGATCTCAAACCCATCTT
EY894240       --> ..................................................
EV547304       --> ..................................................
EY910272       --> GGCTAAATCAACTGCATGCTCCGATGGAACCGAGATCTCAAACCCATCTT
FD942544       --> GGCTAAATCAACTGCATGCTCCGATGGAACCGAGATCTCAAACCCATCTT
EY942982       --> GGCTAAATCAACTGCATGCTCCc...........................
EW739198       --> GGCTAAATCAACTGCATG................................

               699    -    749
UN22072        --> CCCCAGTATACCCGGTCCTGGTAAGGAAGCAAGTGGAACCATTAATGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914176       <-- CCCCAGTATACCCGGTCCTGGTAAGGAAGCAAGTGGAACCc.........
EY924209       <-- CCCCAGTAcc........................................
EV552376       <-- ..................................................
EY946996       <-- ..................................................
EX770727       <-- CCCCAGTATACCCGGTCCTGGT----AAGCAAGTGGAACCATTAATGTCC
FD946420       <-- CCCCAGTATACCCGGTCCTGGTAAGGAAGCAAGTGGAACCATTAATGTCC
EY898087       <-- CCCCAGTATACCCGGTCCTGGTAAGGAAGCAAGTGGAACCATTAATGTCC
FD557479       <-- CCCCAGTATACCCGGTCCTGGTAAGGAAGCAAGTGGAACCATTAATGTCC
EW733994       <-- ....................................AACCATTA-TGTCC
EX895347       <-- ..................................................
EX896927       <-- ..................................................
EX894496       <-- ..................................................
FD970898       <-- ..................................................
EY906530       <-- ..................................................
EX898527       --> CCCCAGTATACCCGGTCCTGGTAAGGAAGCAAGTGGAACCATTAATGTCC
FY429459       --> CCCCAGTATACCCGGTCCTGGTAAGGAAGCAAGTGGAACCATTAAT....
EX900779       --> CCCCAGTATACCCGGTCCTGGTAAGGAAGCAAGTGGAACCATTAATGTCC
EY894240       --> ..................................................
EV547304       --> ..................................................
EY910272       --> CCCCAGTATA........................................
FD942544       --> CCCCAGTATACCCGGTCCTGGTAAGGAAGCAAGTGGAACCATTAATGTCC
EY942982       --> ..................................................
EW739198       --> ..................................................

               749    -    799
UN22072        --> AGGATCTGGAACTGTCCAAAGTAAAGCTTGCTTAAGTCTTCTTTGGTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914176       <-- ..................................................
EY924209       <-- ..................................................
EV552376       <-- ..................................................
EY946996       <-- ..................................................
EX770727       <-- AGGATCTGGAACTGTCCAAAGTAAAGCTTGCTTAAGTCTTCTTTGGTCAA
FD946420       <-- AGGATCTGGAACTGTCCAAAGTAAAGCTTGCTTAAGTCTTCTTTGGTCAA
EY898087       <-- AGGATCTGGAACTGTCCAAAGTAAAGCTTGCTTAAGTCTTCTTTGGTCAA
FD557479       <-- AGGATCTG-AACTGTCCAAAGTAAAGCTTGCTTAAGTCTTCTTTGGTCAA
EW733994       <-- AG-ATCTG-AACTGTCCAAAGTAAAGCTTGCTTA-GTC-TCTTTGGTCAA
EX895347       <-- .GGATCTGGAACTGTCCAAAGTAAAGCTTGCTTAAGTCTTCTTTGGTCAA
EX896927       <-- .......tGAACTGTCCAAAGTAAAGCTTGCTTAAGTCTTCTTTGGTCAA
EX894496       <-- ..........ACTGTCCAAAGTAAAGCTTGCTTAAGTCT-CTTTGGTCAA
FD970898       <-- ..................................................
EY906530       <-- ..................................................
EX898527       --> AGGATCTGGAACTGTCCAAAGTAAAGCTTGCTTAAGTCTTCTTTGGTCAA
FY429459       --> ..................................................
EX900779       --> AGGATCTGGAACTGTCCAAAGTAAAGCTTGCTTAAGTCTTCTTTGGTCAA
EY894240       --> ..................................................
EV547304       --> ..................................................
EY910272       --> ..................................................
FD942544       --> AGGATCTGGAACTGTCCAAAGTAAAGCTTGCTTAAGTCTTCTTTGGTCAA
EY942982       --> ..................................................
EW739198       --> ..................................................

               799    -    849
UN22072        --> GTGTTGAAGCACCGGAGCAGCCAAAGGACCCTGAAGGGCGAGAAGAGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914176       <-- ..................................................
EY924209       <-- ..................................................
EV552376       <-- ..................................................
EY946996       <-- ..................................................
EX770727       <-- GTGTTGAAGCACCGGAGCAGCCAAAGGACCCTGAAGGGCGAGAAGAGATC
FD946420       <-- GTGTTGAAGCACCGGAGCAGCCAAAGGACCCTGAAGGGCGAGAAGAGATC
EY898087       <-- GTGTTGAAGCACCGGAGCAGCCAAAGGACCCTGAAGGGCGAGAAGAGATC
FD557479       <-- GTGTTGAAGCAC-GGAGCAGCCAAAGGACCCTGAAGGGCGAGAAGAGATC
EW733994       <-- GTGTTGAAGCAC-GGAGCAGCCAAAGGACC-TGAAGGGCGAGAAGAGATC
EX895347       <-- GTGTTGAAGCACCGGAGTAGCCAAAGGACC-TGAAGGGCGAGAAGAGATC
EX896927       <-- GTGTTGAAGCACCGGAGCAGCCAAAGGACC-TGAGGGGCGAGAAGAGATC
EX894496       <-- GTGTTGAAGCACCGGAGCAGCCAATGGACC-TGAAGGGCGAGAAGAGATC
FD970898       <-- ..................................................
EY906530       <-- ..................................................
EX898527       --> GTGTTGAAGCACCGGAGCAGCCA...........................
FY429459       --> ..................................................
EX900779       --> GTGTT.............................................
EY894240       --> ..................................................
EV547304       --> ..................................................
EY910272       --> ..................................................
FD942544       --> GTGTTGAAGCACCGGAGCAGCC............................
EY942982       --> ..................................................
EW739198       --> ..................................................

               849    -    899
UN22072        --> TCTCATCATGGATATGCCAAGAGACATCACCACC-TTTGGATTTAAAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914176       <-- ..................................................
EY924209       <-- ..................................................
EV552376       <-- ..................................................
EY946996       <-- ..................................................
EX770727       <-- TCTCATCATGGATATGCCAAGAGACATCACCACC-TTTGGATTTAAAAGC
FD946420       <-- TCTCATCATGGATATGCCAAGAGACATCACCACC-TTTGGATTTAAAAGC
EY898087       <-- TCTCATTATGGATATGCCAAGAGACATCACCACC-TTTGGATTTAAAAGC
FD557479       <-- TCTCATCATGGATATGCCAAGAGACATCACCACC-TTTGGATTTAAAAGC
EW733994       <-- TCTCATCATGGATATGCCAAGAGACATCACCACCCTTTAGATTTAAAAGC
EX895347       <-- TCTCATCATGGATATGCCAAGAGACATCACCACC-TTTGGATTTAAAAGC
EX896927       <-- TCTCATCATGGATATGCCAAGAGACATCACCACC-TTTGGATTTAAAAGC
EX894496       <-- TCTCATCATGGACATGCCAAGAGACATCACCACC-TTTGGATTTAAAAGC
FD970898       <-- .................CAAGAGACATCACCACC-TTTGGATTTAAAAGC
EY906530       <-- ..................................................
EX898527       --> ..................................................
FY429459       --> ..................................................
EX900779       --> ..................................................
EY894240       --> ..................................................
EV547304       --> ..................................................
EY910272       --> ..................................................
FD942544       --> ..................................................
EY942982       --> ..................................................
EW739198       --> ..................................................

               899    -    949
UN22072        --> CTTCATGTGCTCTTCAATATGAGCCAAATCCTTATCCCTACAACCAGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914176       <-- ..................................................
EY924209       <-- ..................................................
EV552376       <-- ..................................................
EY946996       <-- ..................................................
EX770727       <-- CTTCAc............................................
FD946420       <-- CTTCATGTGCTCTTCAATATGAGCCAAATCCTTATCCCTACGACCAGCAT
EY898087       <-- CTTCATGTGCTCTTCAATATGAGCCAAATCCTTATCCCTACAACCAGCAT
FD557479       <-- CTTCATGTGCTCTTCAATATGAGCCAAATCCTTATCCCTACAACCAGCAT
EW733994       <-- CTTCATGTGCTCTTCAATATGAGCCAAATCCTTATCCCTACAACCAGCAT
EX895347       <-- CTTCATGTGCTCTTCAATATGAGCCAAATCCTTATCCCTACAACCAGCAT
EX896927       <-- CTTCATGTGCTCTTCAATATGAGCCAAATCCTTATCCCTACAACCAGCAT
EX894496       <-- CTTCATGTGCTCTTCAATATGAGCCAAATCCTTATCCCTACAACCAGCAT
FD970898       <-- CTTCATGTGCTCTTCAATATGAGCCAAATCCTTATCCCTACAACCAGCAT
EY906530       <-- .............................CCTTATCCCTACAACCAGCAT
EX898527       --> ..................................................
FY429459       --> ..................................................
EX900779       --> ..................................................
EY894240       --> ..................................................
EV547304       --> ..................................................
EY910272       --> ..................................................
FD942544       --> ..................................................
EY942982       --> ..................................................
EW739198       --> ..................................................

               949    -    999
UN22072        --> TCACCACCAAATAGATATGCTCATCCGTCACTTTGGTAATCACCGAGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914176       <-- ..................................................
EY924209       <-- ..................................................
EV552376       <-- ..................................................
EY946996       <-- ..................................................
EX770727       <-- ..................................................
FD946420       <-- TCACCACCAAATAGATATGCTCATCCGTCACTTTGGTAATCACCGAGTCA
EY898087       <-- TCACCACCAAATAGATATGCTCATCCGTC.....................
FD557479       <-- TCACCACCAAATAGATATGCTCATCCGTCACTTTGGTAATCACCGAGTCA
EW733994       <-- TCACCACCAAATAGATATGCTCATCCGTCACTTTGGTAATCACCGAGTCA
EX895347       <-- TCACCACCAAATAGATATGCTCATCCGTCACTTTGGTAATCACCGAGTCA
EX896927       <-- TCACCACCAAATAGATATGCTCATCCGTCACTTTGGTAATCACCGAGTCA
EX894496       <-- TCACCACCAAATAGATATGCTCATCCGTCACTTTGGTAATCACCGAGTCA
FD970898       <-- TCACCACCAAATAGATATGCTCATCCGTCACTTTGGTAATCACCGAGTCA
EY906530       <-- TCACCACCAAATAGATATGCTCATCCGTCACTTTGGTAATCACCGAGTCA
EX898527       --> ..................................................
FY429459       --> ..................................................
EX900779       --> ..................................................
EY894240       --> ..................................................
EV547304       --> ..................................................
EY910272       --> ..................................................
FD942544       --> ..................................................
EY942982       --> ..................................................
EW739198       --> ..................................................

               999    -   1049
UN22072        --> TCAATAGCACCTCCTTTCTCGTTTGTGAACACCGTCAAGCTCCCTGTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914176       <-- ..................................................
EY924209       <-- ..................................................
EV552376       <-- ..................................................
EY946996       <-- ..................................................
EX770727       <-- ..................................................
FD946420       <-- TCAATAGCACCTCCTTTC................................
EY898087       <-- ..................................................
FD557479       <-- TCAATAGCACCTCCTTTCTCGTCTGTGAACACCGTCAAGCTCCCTGTTCC
EW733994       <-- TCAATAGCACCTCCTTTCTCGTTTGTGAACACCGTCAAGCTCCCTGTTCC
EX895347       <-- TCAATAGCACCTCCTTTCTCGTTTGTGAACACCGTCAAGCTCCCTGTTCC
EX896927       <-- TCAATAGCACCTCCTTTCTCGTTTGTGAACACCGTCAAGCTCCCTGTTCC
EX894496       <-- CCAATAGCACCTCCTTTCTCGTTTGTGAACACCGTCAAGCTCCCTGTTCC
FD970898       <-- TCAATAGCACCTCCTTTCTCGTTTGTGAACACCGTCAAGCTCCCTGTGCC
EY906530       <-- TCAATAGCACCTCCTTTCTCGGTTGTGAACACCGTCAAGCTCCCTGTTCC
EX898527       --> ..................................................
FY429459       --> ..................................................
EX900779       --> ..................................................
EY894240       --> ..................................................
EV547304       --> ..................................................
EY910272       --> ..................................................
FD942544       --> ..................................................
EY942982       --> ..................................................
EW739198       --> ..................................................

               1049   -   1099
UN22072        --> AGGAGCCAGACCAGCCACGTCAGCGACCACGAGCGTCTCCAGGAAAGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914176       <-- ..................................................
EY924209       <-- ..................................................
EV552376       <-- ..................................................
EY946996       <-- ..................................................
EX770727       <-- ..................................................
FD946420       <-- ..................................................
EY898087       <-- ..................................................
FD557479       <-- AGGAGCCAGACCAGCCACGTCAGCGACCACGAGCGTCTCCAGGAAAGGAA
EW733994       <-- AGGAGCCAGACCAGCCACGTCAGCGACCACGAGCGTCTCCAGGAAAGGAA
EX895347       <-- AGGAGCCAGACCAGCCACGTCAGCGACCACGAGCGTCTCCAGGAAAGGAA
EX896927       <-- AGGAGCCAGACCAGCCACGTCAGCGACCACGAGCGTCTCCAGGAAAGGAA
EX894496       <-- AGGAGCCAGACCAGCCACGTCAGCGACCACGAGCGTCTCCAGGAAAGGAA
FD970898       <-- AGGAGCCAAACCAGCCACGTCAGCAACCACGAGCGTCTCGAGAAAAGGAA
EY906530       <-- AGGAGCCAAACCAGCCACGTCAGCGACCACGAGCGTCTCGAGAAAAGGAA
EX898527       --> ..................................................
FY429459       --> ..................................................
EX900779       --> ..................................................
EY894240       --> ..................................................
EV547304       --> ..................................................
EY910272       --> ..................................................
FD942544       --> ..................................................
EY942982       --> ..................................................
EW739198       --> ..................................................

               1099   -   1149
UN22072        --> CACAGTCTTTGCCCTTGAGGCTCAGACCACACATATGCGCGACATCAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914176       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY924209       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV552376       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY946996       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX770727       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD946420       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY898087       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD557479       <-- CACAGTCTTTGCCCTTGAGGCTCAGACCACACATATGCGCGACATCAAAC  Raphanus raphanistrum subsp. landra
EW733994       <-- CACAGTCTTTGCCCTTGAGGCTCAAACCACACATATGCGCGACATCGAAC  Raphanus sativus cv Rat-Tail Radish #3870
EX895347       <-- CACAGTCTTTGCCCTTGAGGCTCAGACCACACATATGCGCGACATCAAAC  Raphanus sativus cv Early Scarlet Globe
EX896927       <-- CACAGTCTTTGCCCTTGAGGCTCAGACCACACATATGCGCGACATCAAAC  Raphanus sativus cv Early Scarlet Globe
EX894496       <-- CACAGTCTTTGCCCTTGAGGCTCAGACCACACATATGCGCGACATCAAAC  Raphanus sativus cv Early Scarlet Globe
FD970898       <-- CACAGTCTTTGCCCTTAAGACTCAAACCACACATATGCGCAACATCGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906530       <-- CACAGTCTTTGCCCTTAAGACTCAAACCA-ACATATGCGCAACATCAAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX898527       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY429459       --> ..................................................  Raphanus sativus cv GSK3-1
EX900779       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY894240       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV547304       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY910272       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD942544       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY942982       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW739198       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               1149   -   1199
UN22072        --> AAACTGCCATTGACCCTGCAGTTAACGGTTGAGTCCATGATGGAGTCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914176       <-- ..................................................
EY924209       <-- ..................................................
EV552376       <-- ..................................................
EY946996       <-- ..................................................
EX770727       <-- ..................................................
FD946420       <-- ..................................................
EY898087       <-- ..................................................
FD557479       <-- AAACTGCCATTGACCCTGCAGTTAACGGTTGAGTCCATGATGGAGTCTTT
EW733994       <-- AAACTGCCATTGACCCTGCAGTTAACGGTTGAGTCCATGATGGAGTCTTT
EX895347       <-- AAACTGCCATTGACCCTGCAGTTAACGGTTGAGTCCATGATGGAGTCTTT
EX896927       <-- AAACTGCCATTGACCCTGCAGTTAACGGTTGAGTCCATGATGGAGTCTTT
EX894496       <-- AAACTGCCATTGACCCTGCAGTTAACGGTTGAGTCCATGATGGAGTCTTT
FD970898       <-- AAACTGCCATTGACCCTGCAGTTAACGGTAGAGTCCATGATGGAGTCTTT
EY906530       <-- AAACTGCCATTGACCCTGCAGTTAACGGTAGAGTCCATGATGGAGTCTTT
EX898527       --> ..................................................
FY429459       --> ..................................................
EX900779       --> ..................................................
EY894240       --> ..................................................
EV547304       --> ..................................................
EY910272       --> ..................................................
FD942544       --> ..................................................
EY942982       --> ..................................................
EW739198       --> ..................................................

               1199   -   1249
UN22072        --> GTACTGAATCGGCATACTCCAACCAGCGAAAGGAACCATCTTTCCACCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914176       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY924209       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV552376       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY946996       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX770727       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD946420       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY898087       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD557479       <-- GTACTGAATCGGCATACTCCAACCAGCGAAAGGAACCAT-ATTCCACCGT  Raphanus raphanistrum subsp. landra
EW733994       <-- GTACTGAATCGGCTTACTCCAACCAGCGAAAGGAACCATCTTTCCACCGT  Raphanus sativus cv Rat-Tail Radish #3870
EX895347       <-- GTACTGAATCGGCATACTCCAACCAGCGAAAGGAACCATCTTCCCACCGT  Raphanus sativus cv Early Scarlet Globe
EX896927       <-- GTACTGAATCGGCATACTCCAACCAGCGAAAGGAACCATCTTCCCACCGT  Raphanus sativus cv Early Scarlet Globe
EX894496       <-- GTACTGAATCGGCATACTCCAACCAGCGAAAGGAACCATCTTCCCACCGT  Raphanus sativus cv Early Scarlet Globe
FD970898       <-- GTACTGAATCGGCATACTCCAACCAGCGAAAGGAACCATCTTTCCACCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906530       <-- GTACTGAATCGGCATACTCCAACCAGCGAAAGGAACCATCTTTCCACCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX898527       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY429459       --> ..................................................  Raphanus sativus cv GSK3-1
EX900779       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY894240       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV547304       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY910272       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD942544       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY942982       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW739198       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               1249   -   1299
UN22072        --> GTGCGACGTGGAAGTCGTAAAGAGCTGTCTTTTTCAGGTCGGCATCAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914176       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY924209       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV552376       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY946996       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX770727       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD946420       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY898087       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD557479       <-- GTGCGACGTGGAAGTCGTAAAGAGCTGTCTTTTTCAGGTCGGCGTCAGAG  Raphanus raphanistrum subsp. landra
EW733994       <-- GTGCGACGTGGAAGTCGTAAAGAGCTGTCTTTTTCAGGTCGGCATCAGAG  Raphanus sativus cv Rat-Tail Radish #3870
EX895347       <-- GTGCGACGTGGAAGTCGTAAAGAGCCGTCTTTT-CAGGTCGGCATCAGAG  Raphanus sativus cv Early Scarlet Globe
EX896927       <-- GTGCGACGTGGAAGTCGTAAAGAGCCGTCTTTTTCAGGTCGGCATCAGAG  Raphanus sativus cv Early Scarlet Globe
EX894496       <-- GTGCGACGTGGAAGTCGTAAAGAGCCGTCTTTTTCAGGTCGGCATCAGAG  Raphanus sativus cv Early Scarlet Globe
FD970898       <-- GTGCGACGTGGAAGTCGTAAAGAGCTGTCTTTTTCAGGTCAGCGTCAGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906530       <-- GTGCGACGTGGAAGTCGTAAAGAGCTGTCTTTTTCAGGTCGGCATCAGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX898527       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY429459       --> ..................................................  Raphanus sativus cv GSK3-1
EX900779       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY894240       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV547304       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY910272       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD942544       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY942982       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW739198       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               1299   -   1349
UN22072        --> GCGAAGCAGCGGCGTGACACAGCTTTCTTGTCGGATTGAGCAAGACGACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914176       <-- ..................................................
EY924209       <-- ..................................................
EV552376       <-- ..................................................
EY946996       <-- ..................................................
EX770727       <-- ..................................................
FD946420       <-- ..................................................
EY898087       <-- ..................................................
FD557479       <-- GCGAAGCAGCGGTGTGACACAGCTTTCTTGTCGGATTGAGCAAGACGACG
EW733994       <-- GCGAAGCAGCGGCGTGACACAGCTTTCTTGTCGGATTGAGCAAGACGACG
EX895347       <-- GCGAAGCAGCGGCGTGACACAGCTTTCTTGTCGGATTGAGCAAGACGACG
EX896927       <-- GCGAAGCAGCGGCGTGACACAGCTTTCTTGTCGGATTGAGCAAGACGACG
EX894496       <-- GCGAAGCAGCGGCGTGACACAGCTTTCTTGTCGGATTGAGCAAGACGACG
FD970898       <-- GCGAAGCAGCGGCGTGACACAGCTTTCTTGTCGGATTGAGCAAGACGACG
EY906530       <-- GCGAAGCAGCGGCGTGACACAGCTTTCTTGTCGGATTGAGCAAGACGACG
EX898527       --> ..................................................
FY429459       --> ..................................................
EX900779       --> ..................................................
EY894240       --> ..................................................
EV547304       --> ..................................................
EY910272       --> ..................................................
FD942544       --> ..................................................
EY942982       --> ..................................................
EW739198       --> ..................................................

               1349   -   1399
UN22072        --> GGTTATGGATTGACCTAGCTGCCATAGACTCCCTCCTCTCATCTTCTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914176       <-- ..................................................
EY924209       <-- ..................................................
EV552376       <-- ..................................................
EY946996       <-- ..................................................
EX770727       <-- ..................................................
FD946420       <-- ..................................................
EY898087       <-- ..................................................
FD557479       <-- GGTTATGGATTGCCCTAGCTGCCATAGACTCCCTCCTCTCATCTTCTCTG
EW733994       <-- GGTTATGGATTGACCTAGCTGCCATAGACTCCCTCCTCTAATCTTCTCTG
EX895347       <-- GGTTATGGATTGACCTAGCTGCCATAGACTCCCTCCTCTCATCTTCTCTG
EX896927       <-- GGTTATGGATTGACCTAGCTGCCATAGACTCCCTCCTCTCATCTTCTCTG
EX894496       <-- GGTTATGAACTGACCTAGCTGCCATAGACTCCCTCCTCTCATCTTCTCTG
FD970898       <-- GGTGATGGATTGACCTAGCTGCCATAGACTCCCTCCTCTCATCTTCTCTG
EY906530       <-- GGTTATGGATTGCCCTAGCTGCCATAGACTCCCTCCTCTCATCTTCTCTG
EX898527       --> ..................................................
FY429459       --> ..................................................
EX900779       --> ..................................................
EY894240       --> ..................................................
EV547304       --> ..................................................
EY910272       --> ..................................................
FD942544       --> ..................................................
EY942982       --> ..................................................
EW739198       --> ..................................................

               1399   -   1449
UN22072        --> CCTCAAAAAAGGTTGAGACTTTGTGTTTGCCTCTGTAGCTTCTTCCAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914176       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY924209       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV552376       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY946996       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX770727       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD946420       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY898087       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD557479       <-- CCTCAAGAAAGGTTGAGACTTTGTGTTTGCCTCTGTcc............  Raphanus raphanistrum subsp. landra
EW733994       <-- CCTCAAAAAAGGTTGAGACTTTGTGTTTGCCTCTGTAGCTTCTTCCAGAT  Raphanus sativus cv Rat-Tail Radish #3870
EX895347       <-- CCTCAAAAAAGGTTGAGACTTTGTGTTTGCCTCTGTAGCTTCTTCCAGAT  Raphanus sativus cv Early Scarlet Globe
EX896927       <-- CCTCAAAAAAGGTTGAGACTTTGTGTTTGCCTCTGTAGCTTCTTCCAGAT  Raphanus sativus cv Early Scarlet Globe
EX894496       <-- CCTCAAAAAAGGTTGAGACTTTGTGTTTGCCTCTGTAGCTTCTTCCAGAC  Raphanus sativus cv Early Scarlet Globe
FD970898       <-- CCTCAAGAAAGGTTGAGACTTTGTGTTTGCCTCTGGAGCTTCTTCCAGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906530       <-- CCTCAAGAAAGGTTGAGACTTTGCGTTTGCCTCccc..............  Raphanus raphanistrum subsp. raphanistrum (MS)
EX898527       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY429459       --> ..................................................  Raphanus sativus cv GSK3-1
EX900779       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY894240       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV547304       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY910272       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD942544       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY942982       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW739198       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               1449   -   1499
UN22072        --> TCCTGATCCTACTACTTTGTAGTGTTGTTATTGCAATTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914176       <-- .........................................
EY924209       <-- .........................................
EV552376       <-- .........................................
EY946996       <-- .........................................
EX770727       <-- .........................................
FD946420       <-- .........................................
EY898087       <-- .........................................
FD557479       <-- .........................................
EW733994       <-- TCCTGATCCTACTACTTTGTAGTGTTGTTATTGCAATTCCC
EX895347       <-- TCCTGATCCc...............................
EX896927       <-- TCCTGATCCTACTACTTTGTAGTGTTGTTATTGCccc....
EX894496       <-- TCCTGATCCTACTACTTTGTAGTGTTGTTATTGCAATcc..
FD970898       <-- TCCTGATCCTACTACTTTGTA....................
EY906530       <-- .........................................
EX898527       --> .........................................
FY429459       --> .........................................
EX900779       --> .........................................
EY894240       --> .........................................
EV547304       --> .........................................
EY910272       --> .........................................
FD942544       --> .........................................
EY942982       --> .........................................
EW739198       --> .........................................