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Alignment for radish unigene UN22073

               1      -     51
UN22073        --> GGGAAAATAATACTTCATCGACTCAATCTAGATAGATAGAGAGAG----T
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540200       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901651       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX777412       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX768271       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761431       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV545403       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901742       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919760       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX775239       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV572148       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX899679       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY945015       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY903536       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900928       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX759209       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD575739       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY903240       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574433       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX903313       --> GGGAAAATAATACTTCATCGACTCAATCTAGATAGAGAGAGAGAG----T  Raphanus sativus cv Rat-Tail Radish #3870
FD572007       --> ..GAAAATAATACTTCATCGACTCAATCTAGATAGAGAGAGAGAG----T  Raphanus sativus cv Early Scarlet Globe
EX757979       --> ..ggAAATAATACTTCATCGACTCAATCTAGATAGA----GAGAG----T  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538135       --> ......ggAATACTTCATCGACTCAATCTAGATAGA----GAGAG----T  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567158       --> ......ggAATACTTCATCGACTTAATCTAGATAGA----GAGAG----T  Raphanus raphanistrum subsp. landra
EY905156       --> ......ggAATACTTCATCGACTCAATCTAGATAGA----GAGAG----T  Raphanus raphanistrum subsp. raphanistrum (MS)
EX897108       --> .....ggatATACTTCATCGACTCAATCTAGATAGAGAGAGAGAG----T  Raphanus sativus cv Early Scarlet Globe
FD578959       --> ......ggatTACTTCATCGACTCAATCTAGATAGAGAGAGAGAGAGAGT  Raphanus sativus cv Rat-Tail Radish #3870
EY949513       --> .........ggACTTCATCGACTCAATCTAGATAGAGAGAGAGAG----T  Raphanus sativus cv Rat-Tail Radish #3870
EY924044       --> ..........................ggaatcTAGATAGAGAGAG----T  Raphanus raphanistrum subsp. landra
EX764334       --> ................................................gg  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536077       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535549       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550045       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570428       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX895632       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD558265       --> ..................................................  Raphanus raphanistrum subsp. landra
EX755027       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907249       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               51     -    101
UN22073        --> GAGTGAAGGAGAGAAAGATGGCGATGATGGTATCCGTCTCCAACTCATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540200       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901651       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX777412       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX768271       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761431       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV545403       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901742       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919760       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX775239       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV572148       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX899679       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY945015       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY903536       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900928       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX759209       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD575739       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY903240       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574433       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX903313       --> GAGTGAAGGAGAGAAAGATGGCGATGATGGTATCCGTCTCCAACTCATTT  Raphanus sativus cv Rat-Tail Radish #3870
FD572007       --> GAGTGAAGGAGAGAAAGATGGCGATGATGGTATCCGTCTCCAACTCATTT  Raphanus sativus cv Early Scarlet Globe
EX757979       --> GAGTGAAGGAGAGAAAGATGGCGATGATGGTATCCGTCTCCAACTCATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538135       --> GAGTGAAGGAGAGAAAGATGGCGATGATGGTATCCGTCTCCAACTCATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567158       --> GAGTGAAGGAGAGAAAGATGGCGATGATGGTATCCGTCTCCAACTCATTT  Raphanus raphanistrum subsp. landra
EY905156       --> GAGTGAAGGAGAGAAAGATGGCGATGATGGTATCCGTCTCCAACTCATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX897108       --> GAGTGAAGGAGAGAAAGATGGCGATGATGGTATCCGTCTCCAACTCATTT  Raphanus sativus cv Early Scarlet Globe
FD578959       --> GAGTGAAGGAGAGAAAGATGGCGATGATGGTATCCGTCTCCAACTCATTT  Raphanus sativus cv Rat-Tail Radish #3870
EY949513       --> GAGTGAAGGAGAGAAAGATGGCGATGATGGTATCCGTCTCCAACTCATTT  Raphanus sativus cv Rat-Tail Radish #3870
EY924044       --> GAGTGAAGGAGAGAAAGATGGCGATGATGGTATCCGTCTCCAACTCATTT  Raphanus raphanistrum subsp. landra
EX764334       --> GAGTGAAGGAGAGAAAGATGGCGATGATGGTATCAGTCTCCAACTCATTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536077       --> ggGTGAAGGAGAGAAAGATGGCGATGATGGTATCAGTCTCCAACTCATTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535549       --> .....................CGATGATGGTATCCGTCTCCAACTCATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550045       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570428       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX895632       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD558265       --> ..................................................  Raphanus raphanistrum subsp. landra
EX755027       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907249       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               101    -    151
UN22073        --> CCCACCTTTAATTCTCCCAATCATCTCCGAACCAGCCGAAGAAGAGGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540200       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901651       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX777412       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX768271       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761431       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV545403       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901742       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919760       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX775239       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV572148       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX899679       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY945015       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY903536       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900928       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX759209       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD575739       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY903240       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574433       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX903313       --> GCCACCTTTAATTCTCCCAATCATCTCCGAACCAGCCGAAGAAGAGGATT  Raphanus sativus cv Rat-Tail Radish #3870
FD572007       --> GCCACCTTTAATTCTCCCAATCATCTCCGAACCAGCCGAAGAAGAGGATT  Raphanus sativus cv Early Scarlet Globe
EX757979       --> CCCACCTTTAATTCTCCCAATCATCTCCGAACCAGCCGAAGA---GGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538135       --> CCCACCTTTAATTCTCCCAATCATCTCCGAACCAGCCGAAGAAGAGGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567158       --> CCCACCTTTAATTCTCCCAATCATCTCCGAACCAGCCGAAGAAGAGGATT  Raphanus raphanistrum subsp. landra
EY905156       --> CCCACCTTTAATTCTCCCAATCATCTCCGAACCAGCCGAAGA---GGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX897108       --> GCCACCTTTAATTCCCCCAATCATCTCCGAACCAGCCGAAGAAGAGGATT  Raphanus sativus cv Early Scarlet Globe
FD578959       --> GCCACCTTTAATTCTCCCAATCATCTCCGAACCAGCCGAAGAAGAGGATT  Raphanus sativus cv Rat-Tail Radish #3870
EY949513       --> GCCACCTTTAATTCTCCCAATCATCTCCGAACCAGCCGAAGAAGAGGATT  Raphanus sativus cv Rat-Tail Radish #3870
EY924044       --> CCCACCTTTAATTCTCCCAATCATCTCCGAACCAGCCGAAGAAGAGGATT  Raphanus raphanistrum subsp. landra
EX764334       --> CTCACCTTTAATTCTCCTAATCATCTCCGAACCAGCCGAAGAAGAGGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536077       --> CTCACCTTTAATTCTCCTAATCATCTCCGAACCAGCCGAAGAAGAGGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535549       --> CCCACCTTTAATTCTCCCAATCATCTCCGAACCAGCCGAAGA---GGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550045       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570428       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX895632       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD558265       --> ..................................................  Raphanus raphanistrum subsp. landra
EX755027       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907249       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               151    -    201
UN22073        --> CTGTGCGATGGCTACTACTGGTGTGAGAGTCACAGAAGGACAAGGCAATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540200       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901651       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX777412       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX768271       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761431       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV545403       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901742       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919760       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX775239       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV572148       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX899679       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY945015       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY903536       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900928       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX759209       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD575739       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY903240       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574433       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX903313       --> CTGTGCGATGGCTGCTACTGGCGTGAGAGTCACAGAAGGACAAGGCAATT  Raphanus sativus cv Rat-Tail Radish #3870
FD572007       --> CTGTGCGATGGCTGCTACTGGCGTGAGAGTCACAGAAGGACAAGGCAATT  Raphanus sativus cv Early Scarlet Globe
EX757979       --> CTGTGCGATGGCTACTACTGGTGTGAGAGTCACAGAAGGACAAGGCAATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538135       --> CTGTGCGATGGCTACTACTGGTGTGAGAGTCACAGAAGGACAAGGCAATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567158       --> CTGTGCGATGGCTACTACTGGCGTGAGAGTCACAGAAGGACAAGGCAATT  Raphanus raphanistrum subsp. landra
EY905156       --> CTGTGCGATGGCTACTACTGGTGTGAGAGTCACAGAAGGACAAGGCAATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX897108       --> CTGTGCGATGGCTGCTACTGGCGTTAGAGTCACAGAAGGACAAGGCAATT  Raphanus sativus cv Early Scarlet Globe
FD578959       --> CTGTGCGATGGCTACTACTGGTGTGAGAGTCACAGAAGGACAAGGCAATT  Raphanus sativus cv Rat-Tail Radish #3870
EY949513       --> CTGTGCGATGGCTGCTACTGGCGTGAGAGTCACAGAAGGACAAGGCAATT  Raphanus sativus cv Rat-Tail Radish #3870
EY924044       --> CTGTGCGATGGCTACTACTGGCGTGAGAGTCACAGAAGGACAAGGCAATT  Raphanus raphanistrum subsp. landra
EX764334       --> CTGTGCGATGGCTACTACTGGTGTGAGAGTCACAGAAGGACAAGGCAATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536077       --> CTGTGCGATGGCTACTACTGGTGTGAGAGTCACAGAAGGTGAAGGCAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535549       --> CTGTGCGATGGCTACTACTGGTGTGAGAGTCACAGAAGGACAAGGCAATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550045       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570428       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX895632       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD558265       --> ..................................................  Raphanus raphanistrum subsp. landra
EX755027       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907249       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               201    -    251
UN22073        --> TGCCAAAACTCGTCCTCACTTCTCCCGACAAGAGCGAGGCAGAGATATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540200       <-- .............................AAGAGCGAGGCTGAGATATAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901651       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX777412       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX768271       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761431       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV545403       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901742       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919760       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX775239       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV572148       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX899679       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY945015       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY903536       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900928       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX759209       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD575739       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY903240       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574433       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX903313       --> TGCCAAAACTCGTCCTCACTTCTCCCGACAAGAGCGAGGCAGAGATATAT  Raphanus sativus cv Rat-Tail Radish #3870
FD572007       --> TGCCAAAACTCGTCCTCACTTCTCCCGACAAGAGCGAGGCAGAGATATAT  Raphanus sativus cv Early Scarlet Globe
EX757979       --> TGCCAAAACTCGTCCTCACTTCTCCCGACAAGAGCGAGGCGGAGATATAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538135       --> TGCCAAAACTCGTCCTCACTTCTCCCGACAAGAGCGAGGCAGAGATATAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567158       --> TGCCAAAACTCGCCCTCACTTCTCCGGACAAGAGCGAGGCGGAGATATAT  Raphanus raphanistrum subsp. landra
EY905156       --> TGCCAAAACTCGTCCTCACTTCTCCCGACAAGAGCGAGGCGGAGATATAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX897108       --> TGCCAAAACTCGTCCTCACTTCTCCCGACAAGAGCGAGGCAGAGATATAT  Raphanus sativus cv Early Scarlet Globe
FD578959       --> TGCCAAAACTCGTCCTCACTTCTCCCGACAAGAGCGAGGCAGAGATATAT  Raphanus sativus cv Rat-Tail Radish #3870
EY949513       --> TGCCAAAACTCGTCCTCACTTCTCCCGACAAGAGCGAGGCAGAGATATAT  Raphanus sativus cv Rat-Tail Radish #3870
EY924044       --> TGCCAAAACTCGTCCTCACTTCTCCGGACAAGAGCGAGGCGGAGATATAT  Raphanus raphanistrum subsp. landra
EX764334       --> TGCCAAAACTCGTCCTCACTTCTCCCGACAAGAGCGAGGCAGAGATATAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536077       --> TGCCAAAACTCGTCCTCACTTCTCCCGACAAGAGCGAGGCAGAGATATAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535549       --> TGCCAAAACTCGTCCTCACTTCTCCCGACAAGAGCGAGGCTGAGATATAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550045       --> .........gCGTCCTCACTTCTCCCGACAAGAGCGAGGCGGAGATATAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570428       --> .............gCTCACTTCTCCCGACAAGAGCGAGGCAGAGATATAT  Raphanus sativus cv Early Scarlet Globe
EX895632       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD558265       --> ..................................................  Raphanus raphanistrum subsp. landra
EX755027       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907249       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               251    -    301
UN22073        --> CTGTTTGGAGGATGCGTTACATCGTGGAAAGTAGCGAGTGGGAAAGATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540200       <-- CTGTTTGGAGGATGCGTTACATCGTGGAAAGTAGCGAGTGGGAAAGATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901651       <-- ............................AAGTAGCGAGTGGGAAAGATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX777412       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX768271       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761431       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV545403       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901742       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919760       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX775239       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV572148       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX899679       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY945015       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY903536       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900928       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX759209       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD575739       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY903240       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574433       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX903313       --> CTGTTTGGAGGATGCGTTACATCGTGGAAAGTAGCGAGTGGGAAAGATCT  Raphanus sativus cv Rat-Tail Radish #3870
FD572007       --> CTGTTTGGAGGATGCGTTACATCGTGGAAAGTAGCGAGTGGGAAAGATCT  Raphanus sativus cv Early Scarlet Globe
EX757979       --> CTGTTTGGAGGATGCGTTACATCGTGGAAAGTAGCGAGTGGGAAAGATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538135       --> CTGTTTGGAGGATGCGTTACATCGTGGAAAGTAGCGAGTGGGAAAGATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567158       --> CTGTTTGGAGGATGCGTAACATCGTGGAAAGTTGCGAGTGGGAAAGATCT  Raphanus raphanistrum subsp. landra
EY905156       --> CTGTTTGGAGGATGCGTTACATCGTGGAAAGTAGCGAGTGGGAAAGATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX897108       --> CTGTTTGGAGGATGCGTTACATCGTG-AAAGTAGCGAGTGGGAAAGATCT  Raphanus sativus cv Early Scarlet Globe
FD578959       --> CTGTTTGGAGGATGCGTTACATCGTGGAAAGTTGCGAGTGGGAAAGATCT  Raphanus sativus cv Rat-Tail Radish #3870
EY949513       --> CTGTTTGGAGGATGCGTTACATCGTGGAAAGTAGCGATTGGGAAAGATCT  Raphanus sativus cv Rat-Tail Radish #3870
EY924044       --> CTGTTTGGAGGATGCGTAACATCGTGGAAAGTTGCGAGTGGGAAAGATCT  Raphanus raphanistrum subsp. landra
EX764334       --> CTGTTTGGAGGATGCGTAACATCGTGGAAAGTAGCGAGTGGGAAAGATCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536077       --> CTGTTTGGAGGATGCGTAACATCGTGGAAAGTAGCGAGTGGGAAAGATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535549       --> CTGTTTGGAGGATGCGTTACATCGTGGAAAGTAGCGAGTGGGAAAGATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550045       --> CTGTTTGGAGGATGCGTAACATCGTGGAAAGTTGCGAGTGGGAAAGATCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570428       --> CTGTTTGGAGGATGCGTTACATCGTGGAAAGTAGCGAGTGGGAAAGATCT  Raphanus sativus cv Early Scarlet Globe
EX895632       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD558265       --> ..................................................  Raphanus raphanistrum subsp. landra
EX755027       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907249       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               301    -    351
UN22073        --> TCTTTTTGTTAGACCTGATGCTGTCTTCAATAAGATCAAACCCATCAGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540200       <-- TCTTTTTGTTAGACCTGATGCTGTCTTCAATAAGATCAAACCCATCAGCG
EY901651       <-- -CTTTT-G-TAGA-CTGATGCTGTCTTCAATAAGATCAAACCCATCAGCG
EX777412       <-- ...TTTTTTTAGACCTGATGCTGTCT-CAATAAGATCAAACCCATCAGCG
EX768271       <-- .........TAGAC-TGATGCTGTCTTCAATAAGATCAAACCCATCAGCG
EX761431       <-- ..................TGCTGTCTTCAATAAGATCAAACCCATCAGCG
EV545403       <-- .........................TTCAATAAGATCAAACCCATCAGCG
EY901742       <-- ..................................ATCAAACCCATCAGCG
EY919760       <-- ..................................................
EX775239       <-- ..................................................
EV572148       <-- ..................................................
EX899679       <-- ..................................................
EY945015       <-- ..................................................
EY903536       <-- ..................................................
EX900928       <-- ..................................................
EX759209       <-- ..................................................
FD575739       <-- ..................................................
EY903240       <-- ..................................................
FD574433       <-- ..................................................
EX903313       --> TCTTTTTGTTAGACCTGATGCTGTCTTCAATAAGATCAAACCCATCAGCG
FD572007       --> TCTTTTTGTTAGACCTGATGCTGTCTTCAATAAGATCAAACCCATCAGCG
EX757979       --> TCTTTTTGTTAGACCTGATGCTGTCTTCAATAAGATCAAACCCATCAGCG
EV538135       --> TCTTTTTGTTAGACCTGATGCTGTTTTCAATAAGATCAAGCCCATCAGCG
EV567158       --> TCTTTTTGTTAGACCTGATGCTGTCTTCAATAAGATCAAACCCATCAGCG
EY905156       --> TCTTTTTGTTAGACCTGATGCTGTCTTCAATAAGATCAAACCCATCAGCG
EX897108       --> TCTTTTTGTTAGACCTGATGCTGTCTTCAATAAGATCAAACCCATCAGCG
FD578959       --> TCTTTTTGTTAGACCTGATGCCGTCTTCAATAAGATCAAACCCATCAGCG
EY949513       --> TCTTTTTGTTAGACCTGATGCTGTCTTCAATAAGATCAAACCCATCAGCG
EY924044       --> TCTTTTTGTTAGACCTGATGCTGTCTTCAATAAGATCAAACCCATCAGCG
EX764334       --> TCTTTTTGTTAGACCTGATGCTGTCTTCAATAAGATCAAACCCATCAGCG
EV536077       --> TCTTTTTGTTAGACCTGATGCTGTCTTCAATAAGATCAAACCCATCAGCG
EV535549       --> TCTTTTTGTTAGACCTGATGCTGTCTTCAATAAGATCAAACCCATCAGCG
EV550045       --> TCTTTTTGTTAGACCTGATGCTGTCTTCAATAAGATCAAACCCATCAGCG
FD570428       --> TCTTTTTGTTAGACCTGATGCTGTCTTCAATAAGATCAAACCCATCAGCG
EX895632       --> ..................................................
FD558265       --> ..................................................
EX755027       --> ..................................................
EY907249       --> ..................................................

               351    -    401
UN22073        --> GAGGGATTCCACATT-GTTTCCCTCAGTTTGGACCTGGAGTTATTCAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540200       <-- GAGGGATTCCACATT-GTTTCCCTCAGTTTGGACCTGGAGTTATCCAGCA
EY901651       <-- GAGGGATTCCACATT-GTTTCCCTCAGTTTGGACCTGGAGTTATCCAGCA
EX777412       <-- GAGGGAT-CCACATT-GTTTCCCTCAGTTTGGACCTGGAGTTATTCAGCA
EX768271       <-- GAGGGATTCCACATT-GTTTCCCTCAGTTTGGACCTGGAGTTATTCAGCA
EX761431       <-- GAGGGATTCCACATT-GTTTCCCTCAGTTTGGACCTGGAGTTATCCAGCA
EV545403       <-- GAGGGATTCCACATT-GTTTCCCTCAGTTTGGACCTGGAGTTATTCAGCA
EY901742       <-- GAGGGATTCCACATT-GTTTCCCTCAGTTTGGACCTGGAGTTATTCAGCA
EY919760       <-- ......TTCCACATT-GTTTCCCTCAGTTTGGACCTGGAGTTATTCAGCA
EX775239       <-- ........CCACATT-GTTTCCCTCAGTTTGGACCTGGAGTTATTCAGCA
EV572148       <-- ..............................................AGCA
EX899679       <-- ..................................................
EY945015       <-- ..................................................
EY903536       <-- ..................................................
EX900928       <-- ..................................................
EX759209       <-- ..................................................
FD575739       <-- ..................................................
EY903240       <-- ..................................................
FD574433       <-- ..................................................
EX903313       --> GAGGGATTCCACATT-GTTTCCCTCAGTTTGGACCTGGAGTTATTCAGCA
FD572007       --> GAGGGATTCCACATT-GTTTCCCTCAGTTTGGACCTGGGGTTATTCAGCA
EX757979       --> GAGGGATTCCACATT-GTTTCCCTCAGTTTGGACCTGGAGTTATCCAGCA
EV538135       --> GAGGGATTCCACATT-GCTTCCCCCAGTTTGGACCTGGAGTTATTCAGCA
EV567158       --> GAGGGATTCCACATT-GTTTCCCTCAGTTTGGACCTGGAGTTATTCAGCA
EY905156       --> GAGGGATTCCACATT-GTTTCCCTCAGTTTGGACCTGGAGTTATCCAGCA
EX897108       --> GAGGGATTCCACATT-GTTTCCCTCAGTTTGGACCTGGAGTTATTCAGCA
FD578959       --> GAGGGATCCCACATT-GTTTCCCCCAGTTTGGACCTGGAGTTATTCAGCA
EY949513       --> GAGGGATTCCACATT-GTTTCCCTCAGTTTGGACCTGGAGTTATTCAGCA
EY924044       --> GAGGGATTCCACATT-GTTTCCCTCAGTTTGGACCTGGAGTTATTCAGCA
EX764334       --> GAGGGATTCCACATT-GTTTCCCTCAGTTTGGACCTGGAGTTATTCAGCA
EV536077       --> GAGGGATTCCACATT-GTTTCCCTCAGTTTGGACCTGGAGTTATTCAGCA
EV535549       --> GAGGGATTCCACATTTGTTTCCCTCAGTTTGGACCTGGAGTTATCCAGCA
EV550045       --> GAGGGATTCCACATT-GTTTCCCTCAGTTTGGACCTGGAGTTATTCAGCA
FD570428       --> GAGGGATTCCACATT-GTTTCCCTCAGTTTGGACCTGGAGTTATTCAGCA
EX895632       --> ..................................................
FD558265       --> ..................................................
EX755027       --> ..................................................
EY907249       --> ..................................................

               401    -    451
UN22073        --> GCATGGGTTTGGAAGGAACATGGACTGG-TCTGTTGTTGATTCTGAGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540200       <-- GCATGGGTTTGGAAGGAACATGGACTGG-TCTGTTGTTGATTCTGAGAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901651       <-- GCATGGGTTTGGAAGGAACATGGACTGG-TCTGTTGTTGATTCTGAGAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX777412       <-- GCATGGGTTTGGAAGGAACATGGACTGG-TCTGTTGTTGATTCTGAGAAT  Raphanus raphanistrum subsp. landra
EX768271       <-- GCATGGGTTTGGAAGGAACATGGACTGG-TCTGTTGTTGATTCTGAGAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761431       <-- GCATGGGTTTGGAAGGAACATGGACTGG-TCTGTTGTTGATTCTGAGAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV545403       <-- GCATGGGTTTGGAAGGAACATGGACTGG-TCTGTTGTTGATTCTGAGAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901742       <-- GCATGGGTTTGGAAGGAACATGGACTGG-TCTGTTGTTGATTCTGAGAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919760       <-- GCATGGGTTTGGAAGGAACATGGACTGG-TCTGTTGTTGATTCTGAGAAT  Raphanus raphanistrum subsp. landra
EX775239       <-- GCATGGGTTTGGAAGGAACATGGACTGG-TCTGTTGTTGATTCTGAGAAT  Raphanus raphanistrum subsp. landra
EV572148       <-- GCATGGGTTTGGAAGTAACATGGACTGG-TCTGTTGTTGATTCTGAGAAT  Raphanus raphanistrum subsp. landra
EX899679       <-- .....GGTTTGGAAGGAACATGGACTGG-TCTGTTGTGGATTCTGAGAAT  Raphanus sativus cv Early Scarlet Globe
EY945015       <-- ....................................tgGATTCTGAGAAT  Raphanus sativus cv Rat-Tail Radish #3870
EY903536       <-- .........................................TCTGAGAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900928       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX759209       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD575739       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY903240       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574433       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX903313       --> GCATGGGTTTGGAAGGAACATGGACTGG-TCTGTTGTGGATTCTGAGAAT  Raphanus sativus cv Rat-Tail Radish #3870
FD572007       --> GCATGGGTTTGGAAGGAACATGGACTGG-TCTGTTGTGGATTCTGAGAAT  Raphanus sativus cv Early Scarlet Globe
EX757979       --> GCATGGGTTTGGAAGGAACATGGACTGG-TCTGTTGTTGATTCTGAGAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538135       --> GCATGGATTTGGAAGGAACATGGACTGG-TCTGTTGTGGATTCTGAGAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567158       --> GCATGGGTTTGGAAGTAACATGGACTGG-TCTGTTGTTGATTCTGAGAAT  Raphanus raphanistrum subsp. landra
EY905156       --> GCATGGGTTTGGAAGGAACATGGACTGG-TCTGTTGTTGATTCTGAGAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX897108       --> GCATGGGTTTGGAAGGAACATGGACTGG-TCTGTTGTGGATTCTGAGAAT  Raphanus sativus cv Early Scarlet Globe
FD578959       --> GCATGGGTTTGGAAGGAACATGGACTGG-TCTGTTGTTGATTCTGAAAAT  Raphanus sativus cv Rat-Tail Radish #3870
EY949513       --> GCATGGGTTTGGAAGGAACATGGACTGG-TCTGTTGTGGATTCTGAGAAT  Raphanus sativus cv Rat-Tail Radish #3870
EY924044       --> GCATGGGTTTGGAAGGAACATGGACTGG-TCTGTTGTTGATTCTGAGAAT  Raphanus raphanistrum subsp. landra
EX764334       --> GCATGGGTTTGGAAGGAACATGGACTGG-TCTGTTGTTGATTCTGAGAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536077       --> GCATGGGTTTGGAAGGAACATGGACTGG-TCTGTTGTTGATTCTGAGAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535549       --> GCATGGGTTTGGAAGGAACATGGACTGGGTCTGTTGTTGATTCTGAGAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550045       --> GCATGGGTTTGGAAGGAACATGGACTGG-TCTGTTGTTGATTCTGAGAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570428       --> GCATGGGTTTGGAAGGAACATGGACTGG-TCTGTTGTGGATTCTGAGAAT  Raphanus sativus cv Early Scarlet Globe
EX895632       --> .....GGTTTGGAAGGAACATGGACTGG-TCTGTTGTGGATTCTGAGAAT  Raphanus sativus cv Early Scarlet Globe
FD558265       --> .....................GGACTGG-TCTGTTGTTGATTCTGAGAAT  Raphanus raphanistrum subsp. landra
EX755027       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907249       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               451    -    501
UN22073        --> GCCGTTGACAATGCTGCTGTTACTCTTGAGCTCAAGGATGGTCCTTATAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540200       <-- GCCGTTGACAATGCTGCTGTTACTCTTGAACTCAAGGTTGGTCCTTATAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901651       <-- GCCGTTGACAATGCTGCTGTTACTCTTGAACTCAAGGATGGTCCTTATAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX777412       <-- GCCGTTGACAATGCTGCTGTTACTCTTGAGCTCAAGGATGGTCCTTATAG  Raphanus raphanistrum subsp. landra
EX768271       <-- GCCGTTGATAATGCTGCTGTTACTCTTGAGCTCAAGGATGGTCCTTATAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761431       <-- GCCGTTGACAATGCTGCTGTTACTCTTGAACTCAAGAATGGTCCTTATAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV545403       <-- GCGGTTGACAATGCTGCTGTTACTCTTGAGCTCAAGGATGGTCCTTATAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901742       <-- GCCGTTGACAATGCTGCTGTTACTCTTGAGCTCAAGGATGGTCCTTATAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919760       <-- GCCGTTGACAATGCTGCTGTTACTCTTGAGCTCAAGGATGGTCCTTATAG  Raphanus raphanistrum subsp. landra
EX775239       <-- GCCGTTGACAATGCTGCTGTTACTCTTGAGCTCAAGGATGGTCCTTATAG  Raphanus raphanistrum subsp. landra
EV572148       <-- GCCGTTGACAATGCTGCTGTTACTCTTGAGCTCAAGGATGGTCCTTATAG  Raphanus raphanistrum subsp. landra
EX899679       <-- GCCGTTGACAATGCTGCTGTTACTCTTGAGCTCAAGAATGGTCCTTATAG  Raphanus sativus cv Early Scarlet Globe
EY945015       <-- GCCGTTGACAATGCTGCTGTTACTCTTGAGCTCAAGAATGGTCCTTATAG  Raphanus sativus cv Rat-Tail Radish #3870
EY903536       <-- GCCGTTGACAATGCTGCTGTTACTCTTGAGCTCAAGGATGGTCCTTATAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900928       <-- ...............GCTGTTACTCTTGAGCTCAAGAATGGTCCTTATAG  Raphanus sativus cv Early Scarlet Globe
EX759209       <-- ...................TTACTCTTGAGCTCAAGGATGGTCCTTATAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD575739       <-- ....................TACTCTTGAGCTCAAGAATGGTCCTTATAG  Raphanus sativus cv Early Scarlet Globe
EY903240       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574433       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX903313       --> GCCGTTGACAATGCTGCTGTTACTCTTGAGCTCAAGAATGGTCCTTATAG  Raphanus sativus cv Rat-Tail Radish #3870
FD572007       --> GCCGTTGACAATGCTGCTGTTACTCTTGAGCTCAAGAATGGTCCTTATAG  Raphanus sativus cv Early Scarlet Globe
EX757979       --> GCCGTTGACAATGCTGCTGTTACTCTTGAACTCAAGAATGGTCCTTATAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538135       --> GCCGTCGACAATGCTGCTGTGACTCTTGAGCTCAAGGATGGTCCTTATAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567158       --> GCCGTTGACAATGCTGCTGTTACTCTTGAGCTCAAGGATGGTCCTTATAG  Raphanus raphanistrum subsp. landra
EY905156       --> GCCGTTGACAATGCTGCTGTTACTCTTGAACTCAAGGATGGTCCTTATAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX897108       --> GCCGTTGACAATGCTGCTGTTACTCTTGAGCTCAAGAATGGTCCTTATAG  Raphanus sativus cv Early Scarlet Globe
FD578959       --> GCCATTGACAATGCTGCTGTGACTCTTGAGCTCAAGGATGGTCCTTATAG  Raphanus sativus cv Rat-Tail Radish #3870
EY949513       --> GCCGTTGACAATGCTGCTGTTACTCTTGAGCTCAAGAATGGTCCTTATAG  Raphanus sativus cv Rat-Tail Radish #3870
EY924044       --> GCCGTTGACAATGCTGCTGTTACTCTTGAGCTCAAGGATGGTCCTTATAG  Raphanus raphanistrum subsp. landra
EX764334       --> GCCGTTGATAATGCTGCTGTTACTCTTGAGCTCAAGGATGGTCCTTATAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536077       --> GCCGTTGACAATGCTGCTGTTACTCTTGAGCTCAAGGATGGTCCTTATAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535549       --> GCCGTTGACAATGCTGCTGTTACTCTTGAACTCAAGGTTGGTCCTTATAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550045       --> GCGGTTGACAATGCTGCTGTTACTCTTGAGCTCAAGGATGGTCCTTATAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570428       --> GCCGTTGACAATGCTGCTGTTACTCTTGAGCTCAAGAATGGTCCTTATAG  Raphanus sativus cv Early Scarlet Globe
EX895632       --> GCCGTTGACAATGCTGCTGTTACTCTTGAGCTCAAGAATGGTCCTTATAG  Raphanus sativus cv Early Scarlet Globe
FD558265       --> GCCGTTGACAATGCTGCTGTTACTCTTGAGCTCAAGGATGGTCCTTATAG  Raphanus raphanistrum subsp. landra
EX755027       --> ...................TTACTCTTGAGCTCAAGGATGGTCCTTATAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907249       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               501    -    551
UN22073        --> TCGATCCATGTGGG-ACTTTGCTTTCCACGCTCTTTACAAGGTCGTTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540200       <-- TCGATCCATGTGGGGACTTTGCTTTCCACGCTCTTTACAAGGTCGTTGTT
EY901651       <-- TCGATCCATGTGGG-ACTTTGCTTTCCACGCTCTTTACAAGGTCGTTGTT
EX777412       <-- TCGATCCATGTGGG-ACTTTGCTTTCCACGCTCTTTACAAGGTCGTTGTT
EX768271       <-- TCGATCCATGTGGG-ACTTTGCTTTCCACGCTCTTTACAAGGTCGTTGTT
EX761431       <-- TCGATCCATGTGGG-ACTTTGCTTTCCACGCTCTTTACAAGGTCGTTGTT
EV545403       <-- TCGATCCATGTGGG-ACTTTGCTTTCCACGCTCTTTACAAGGTCGTTGTT
EY901742       <-- TCGATCTATGTGGG-ACTTTGCTTTCCACGCTCTTTACAAGGTCGTTGTT
EY919760       <-- TCGATCCATGTGGG-ACTTTGCTTTCCACGCTCTTTACAAGGTCGTTGTT
EX775239       <-- TCGATCCATGTGGG-ACTTTGCTTTCCACGCTCTTTACAAGGTCGTTGTT
EV572148       <-- TCGATCCATGTGGG-ACTTTGCTTTCCACGCTCTTTACAAGGTCGTTGTT
EX899679       <-- TCGATCCATGTGGG-ACTTTGCTTTCCACGCTCTTTACAAGGTCGTTGTT
EY945015       <-- TCGATCCATGTGGG-ACTTTGCTTTCCACGCTCTTTACAAGGTCGTTGTT
EY903536       <-- TCGATCTATGTGGG-ACTTTGCTTTCCACGCTCTTTACAAGGTCGTTGTT
EX900928       <-- TCGATCCGTGTGGG-ACTTTGCTTTCCACGCTCTTTACAAGGTCGCTGTT
EX759209       <-- TCGATCTATGTGGG-ACTTTGCTTTCCACGTTCTTTACAAGGTCGTTGTT
FD575739       <-- TCGATCCATGTGGG-ACTTTGCTTTCCACGCTCTTTACAAGGTCGTTGTT
EY903240       <-- ....................................gCAAGGTCGTTGTT
FD574433       <-- ..................................................
EX903313       --> TCGATCCATGTGGG-ACTTTGCTTTCCACGCTCTTTACAAGGTCGTTGTT
FD572007       --> TCGATCCATGTGGG-ACTTTGCTTTCCACGCTCTTTACAAGGTCGTTGTT
EX757979       --> TCGATCCATGTGGG-ACTTTGCTTTCCACGCTCTTTACAAGGTCGTTGTT
EV538135       --> TCGATCCATGTGGG-ACTTTGCTTTCCACGCTCTTTACAAGGTCGTTGTT
EV567158       --> TCGATCCATGTGGG-ACTTTGCTTTCCACGCTCTTTACAAGGTCGTTGTT
EY905156       --> TCGATCCATGTGGG-ACTTTGCTTTCCACGCTCTTTACAAGGTCGTTGTT
EX897108       --> TCGATCCGTGTGGG-ACTTTGCTTTCCACGCTCTTTACAAGGTCGCTGTT
FD578959       --> TCGATCCATGTGGG-ACTTTGCTTTCCACGCTCTTTACAAGGTCGTTGTT
EY949513       --> TCGATCCATGTGGG-ACTTTGCTTTCCACGCTCTTTACAAGGTCGTTGTT
EY924044       --> TCGATCCATGTGGG-ACTTTGCTTTCCACGCTCTTTACAAGGTCGTTGTT
EX764334       --> TCGATCCATGTGGG-ACTTTGCTTTCCACGCTCTTTACAAGGTCGTTGTT
EV536077       --> TCGATCTATGTGGG-ACTTTGCTTTCCACGCTCTTTACAAGGTCGTTGTT
EV535549       --> TCGATCCATGTGGG-ACTTTGCTTTCCACGCTCTTTACAAGGTCGTTGTT
EV550045       --> TCGATCCATGTGGG-ACTTTGCTTTCCACGCTCTTTACAAGGTCGTTGTT
FD570428       --> TCGATCCATGTGGG-ACTTTGCTTTCCACGCTCTTTACAAGGTCGTTGTT
EX895632       --> TCGATCCATGTGGG-ACTTTGCTTTCCACGCTCTTTACAAGGTCGTTGTT
FD558265       --> TCGATCCATGTGGG-ACTTTGCTTTCCACGCTCTTTACAAGGTCGTTGTT
EX755027       --> TCGATCTATGTGGG-ACTTTGCTTTCCACGTTCTTTACAAGGTCGTTGTT
EY907249       --> ....................................gCAAGGTCGTTGTT

               551    -    601
UN22073        --> GGCGCGG-ACTGCCTTTCCACCGAGCTTAAAA-TTACAAACACAGACAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540200       <-- GGCGCGGGACTGCCTTTCCACCGAGCTTAAAAATTACAAACACAGACAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901651       <-- GGCGCGG-ACTGCCTTTCCACCGAGCTTAAAA-TTACAAACACAGACAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX777412       <-- GGCGCGG-ACTGCCTTTCCACCGAGCTTAAAA-TTACAAACACAGACAGC  Raphanus raphanistrum subsp. landra
EX768271       <-- GGGGCGG-ACAGCCTTTCCACCGAGCTTAAAA-TTACAAACACAGACAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761431       <-- GGCGCGG-ACTGCCTTTCCACCGAGCTTAAAA-TTACAAACACAGACAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV545403       <-- GGCGCGG-ACTGCCTTTCCACCGAACTTAAAA-TTATGAACACAGACAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901742       <-- GGCGCGG-ACTGCCTTTCCACCGAGCTTAAAA-TTACAAACACAGACAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919760       <-- GGCGCGG-ACTGCCTTTCCACCGAGCTTAAAA-TTACAAACACAGACAGC  Raphanus raphanistrum subsp. landra
EX775239       <-- GGCGCGG-ACTGCCTTTCCACCGAGCTTAAAA-TTACAAACACAGACAGC  Raphanus raphanistrum subsp. landra
EV572148       <-- GGCGCGG-ACTGCCTTTCCACCGAGCTTAAAA-TTACAAACACAGACAGC  Raphanus raphanistrum subsp. landra
EX899679       <-- GGCGCGG-ACTGCCTTTCCACCGAGCTTAAAA-TTATAAACACAGACAAC  Raphanus sativus cv Early Scarlet Globe
EY945015       <-- GGCGCGG-ACTGCCTTTCCACCGAGCTTAAAA-TTATAAACACAGACAAC  Raphanus sativus cv Rat-Tail Radish #3870
EY903536       <-- GGCGCGG-ACTGCCTTTCCACCGAGCTTAAAA-TTACAAACACAGACAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900928       <-- GGCGCGG-ACTGCCTTTCCACCGAGCTTAAAA-TTATAAACACAGACAAC  Raphanus sativus cv Early Scarlet Globe
EX759209       <-- GGCGCGG-ACTGCCTTTCCACCGAGCTTAAAA-TTACAAACACAGACAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD575739       <-- GGCGCGG-ACTGCCTTTCCACCGAGCTTAAAA-TTATAAACACAGACAAC  Raphanus sativus cv Early Scarlet Globe
EY903240       <-- GGCGCGG-ACTGCCTTTCCACCGAGCTTAAAA-TTACAAACACAGACAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574433       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX903313       --> GGCGCGG-ACTGCCTTTCCACCGAGCTTAAAA-TTATAAACACAGACAAC  Raphanus sativus cv Rat-Tail Radish #3870
FD572007       --> GGCGCGG-ACTGCCTTTCCACCGAGCTTAAAA-TTATAAACACAGACAAC  Raphanus sativus cv Early Scarlet Globe
EX757979       --> GGCGCGG-ACTGCCTTTCCACCGAGCTTAAAA-TTACAAACACAGACAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538135       --> GGCGCGG-ACAGGCTTTCCACCGAGCTTAAAA-TTACAAACACAGACAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567158       --> GGCGCGG-ACTGCCTTTCCACCGAGCTTAAAA-TTACAAACACAGACAGC  Raphanus raphanistrum subsp. landra
EY905156       --> GGCGCGG-ACTGCCTTTCCACCGAGCTTAAAA-TTACAAACACAGACAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX897108       --> GGCGCGG-ACTGCCTTTCCACCGAGCTTAAAA-TTATAAACACAGACAAC  Raphanus sativus cv Early Scarlet Globe
FD578959       --> GGCGCGG-ACAGCCTTTCCACCGAGCTTAAAA-TTACAAACACAGACAGC  Raphanus sativus cv Rat-Tail Radish #3870
EY949513       --> GGCGCGG-ACTGCCTTTCCACCGAGCTTAAAA-TTATAAACACAGACAAC  Raphanus sativus cv Rat-Tail Radish #3870
EY924044       --> GGCGCGG-ACTGCCTTTCCACCGAGCTTAAAA-TTACAAACACAGACAGC  Raphanus raphanistrum subsp. landra
EX764334       --> GGGGCGG-ACAGCCTTTCCACCGAGCTTAAAA-TTACAAACACAGACAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536077       --> GGCGCGG-ACTGCCTTTCCACCGAGCTTAAAA-TTACAAACACAGACAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535549       --> GGCGCGG-ACTGCCTTTCCACCGAGCTTAAAA-TTACAAACACAGACAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550045       --> GGCGCGG-ACTGCCTTTCCACCGAACTTAAAA-TTATGAACACAGACAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570428       --> GGCGCGG-ACTGCCTTTCCACCGAGCTTAAAA-TTATAAACACAGACAAC  Raphanus sativus cv Early Scarlet Globe
EX895632       --> GGCGCGG-ACTGCCTTTCCACCGAGCTTAAAA-TTATAAACACAGACAAC  Raphanus sativus cv Early Scarlet Globe
FD558265       --> GGCGCGG-ACTGCCTTTCCACCGAGCTTAAAA-TTACAAACACAGACAGC  Raphanus raphanistrum subsp. landra
EX755027       --> GGCGCGG-ACTGCCTTTCCACCGAGCTTAAAA-TTACAAACACAGACAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907249       --> GGCGCGG-ACTGCCTTTCCACCGAGCTTAAAA-TTACAAACACAGACAAC  Raphanus raphanistrum subsp. raphanistrum (MS)

               601    -    651
UN22073        --> AAACCATTCTCTTTTAACACCGCCTTGCATACTTACTTCCGTGCTTCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540200       <-- AAACCATTCTCTTTTAACACCGCCTTGCATACTTACTTCCGTGCTTCTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901651       <-- AAACCATTCTCTTTTAACACCGCCTTGCATACTTACTTCCGTGCTTCTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX777412       <-- AAACCGTTCTCTTTTAACACCGCCTTGCATACTTACTTCCGTGCTTCTGT  Raphanus raphanistrum subsp. landra
EX768271       <-- AAACCGTTCTCCTTTAACACCGCCTTGCATACTTACTTCCGCGCTTCTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761431       <-- AAACCATTCTCTTTTAACACCGCCTTGCATACTTACTTCCGTGCTTCTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV545403       <-- AAACCATTCTCTTTTAACACCCCCTTGCATACTTACTTCCGTGCTTCTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901742       <-- AAACCGTTCTCTTTTAACACCGCCTTGCATACTTACTTCCGCGCTTCTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919760       <-- AAACCGTTCTCTTTTAACACCGCCTTGCATACTTACTTCCGTGCTTCTGT  Raphanus raphanistrum subsp. landra
EX775239       <-- AAACCGTTCTCTTTTAACACCGCCTTGCATACTTACTTCCGTGCTTCTGT  Raphanus raphanistrum subsp. landra
EV572148       <-- AAACCGTTCTCTTTTAACACCGCCTTGCATACTTACTTCCGTGCTTCTGT  Raphanus raphanistrum subsp. landra
EX899679       <-- AAACCATTCTCTTTTAACACCGCCTTGCATACTTACTTCCGTGCTTCTGT  Raphanus sativus cv Early Scarlet Globe
EY945015       <-- AAACCATTCTCTTTTAACACCGCCTTGCATACTTACTTCCGTGCTTCTGT  Raphanus sativus cv Rat-Tail Radish #3870
EY903536       <-- AAACCGTTCTCTTTTAACACCGCCTTGCATACTTACTTCCGCGCTTCTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900928       <-- AAACCATTCTCTTTTAACACCGCCTTGCATACTTACTTCCGTGCTTCTGT  Raphanus sativus cv Early Scarlet Globe
EX759209       <-- AAACCGTTTTCTTTTAACACCGCCTTGCATACTTACTTCCGCGCTTCTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD575739       <-- AAACCATTCTTTTTTACCACCGCCTTGCATACTTACTTCCGTGCTTCTGT  Raphanus sativus cv Early Scarlet Globe
EY903240       <-- AAACCGTTCTCTTTTAACACCGCCTTGCATACTTACTTCCGCGCTTCTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574433       <-- .........TCTTTTAACACCGCCTTGCATACTTACTTCCGTGCTTCTGT  Raphanus sativus cv Early Scarlet Globe
EX903313       --> AAACCATTCTCTTTTAACACCGCCTTGCATACTTACTTCCGTGCTTCTGT  Raphanus sativus cv Rat-Tail Radish #3870
FD572007       --> AAACCATTCTCTTTTACCACCGCCTTGCATACTTACTTCCGTGCTTCTGT  Raphanus sativus cv Early Scarlet Globe
EX757979       --> AAACCATTCTCTTTTAACACCGCCTTGCATACTTACTTCCGTGCTTCTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538135       --> AAACCGTTCTCTTTTAACACCGCCTTGCATACTTACTTCCGCGCTTCTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567158       --> AAACCGTTCTCTTTTAACACCGCCTTGCATACTTACTTCCGTGCTTCTGT  Raphanus raphanistrum subsp. landra
EY905156       --> AAACCATTCTCTTTTAACACCGCCTTGCATACTTACTTCCGTGCTTCTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX897108       --> AAACCATTCTCT......................................  Raphanus sativus cv Early Scarlet Globe
FD578959       --> AAACCCTTCTCTTTTAACACCGCCTTGCATACTTACTTCCGTGCTTCTGT  Raphanus sativus cv Rat-Tail Radish #3870
EY949513       --> AAACCATTCTCTTTTAACACCGCCTTGCATACTTACTTCCGTGCTTCTGT  Raphanus sativus cv Rat-Tail Radish #3870
EY924044       --> AAACCGTTCTCTTTTAACACCGCCTTGCATACTTACTTCCGTGCTTCTGT  Raphanus raphanistrum subsp. landra
EX764334       --> AAACCGTTCTCCTTTAACACCGCCTTGCATACTTACTTCCGCGCTTCTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536077       --> AAACCGTTCTCTTTTAACACCGCCTTGCATACTTACTTCCGCGCTTCTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535549       --> AAACCATTCTCTTTTAACACCGCCTTGCATACTTACTTCCGTGCTTCTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550045       --> AAACCATTCTCTTTTAACACCGCCTTGCATACTTACTTCCGTGCTTCTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570428       --> AAACCATTCTCTTTTAACACCGCCTTGCATACTTACTTCCGTGCTTCTGT  Raphanus sativus cv Early Scarlet Globe
EX895632       --> AAACCATTCTCTTTTAACACCGCCTTGCATACTTACTTCCGTGCTTCTGT  Raphanus sativus cv Early Scarlet Globe
FD558265       --> AAACCGTTCTCTTTTAACACCGCCTTGCATACTTACTTCCGTGCTTCTGT  Raphanus raphanistrum subsp. landra
EX755027       --> AAACCGTTCTCTTTTAACACCGCCTTGCATACTTACTTCCGCGCTTCTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907249       --> AAACCGTTCTCTTTTAACACCGCCTTGCATACTTACTTCCGCGCTTCTGT  Raphanus raphanistrum subsp. raphanistrum (MS)

               651    -    701
UN22073        --> CACTGGAGCATCCGTGAAAGGTTT-AAAGGGTTGTAAAACTCTCAATAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540200       <-- GACTGGAGCATCCGTGAAAGGTTT-AAAGGGTTGT...............  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901651       <-- GACTGGAGCATCCGTGAAAGGTTT-AAAGGGTTGTAAAACTCTCAATAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX777412       <-- CACTGGAGCATCCGTGAAAGGTTT-AAAGGGTTGTAAAACACTCAATAAG  Raphanus raphanistrum subsp. landra
EX768271       <-- CACTGGAGCATCCGTGAAAGGTTT-AAAGGGTTGTAAAACTCTCAACAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761431       <-- GACTGGAGCATCCGTGAAAGGTTT-AAAGGGTTGTAAA-CTCTCAATAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV545403       <-- CACTGGAGCATCCGTGAAAGGTTT-AAAGGGTTGTAAAACACTCAATAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901742       <-- TACTGGAGCATCCGTGAAAGGTTT-AAAGGGTTGTAAAACTCTCAATAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919760       <-- CACTGGAGCATCCGTGAAAGGTTT-AAAGGGTTGTAAAACACTCAATAAG  Raphanus raphanistrum subsp. landra
EX775239       <-- CACTGGAGCATCCGTGAAAGGTTT-AAAGGGTTGTAAAACACTCAATAAG  Raphanus raphanistrum subsp. landra
EV572148       <-- CACTGGAGCATCCGTGAAAGGTTT-AAAGGGTTGTAAAACACTCAATAAG  Raphanus raphanistrum subsp. landra
EX899679       <-- CACTGGAGCATCCGTGAAAGGTTT-AAAGGGTTGTAAAACTCTCAATAAG  Raphanus sativus cv Early Scarlet Globe
EY945015       <-- CACTGGAGCATCCGTGAAAGGTTT-AAAGGGTTGTAAAACTCTCAATAAG  Raphanus sativus cv Rat-Tail Radish #3870
EY903536       <-- TACTGGAGCATCCGTGAAAGGTTT-AAAGGGTTGTAAAACTCTCAATAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900928       <-- CACTGGAGCATCCGTGAAAGGTTT-AAAGGGTTGTAAAACTCTCAATAAG  Raphanus sativus cv Early Scarlet Globe
EX759209       <-- TACTGGAGCATCCGTGAAAGGTTT-AAAGGGTTGTAAAACTCTCAATAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD575739       <-- CACTGGAGCATCCGTGAAAGGTTT-AAAGGGTTGTAAAACTCTCAATAAG  Raphanus sativus cv Early Scarlet Globe
EY903240       <-- TACTGGAGCATCCGTGAAAGGTTT-AAAGGGTTGTAAAACCCTCAATAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574433       <-- CACTGGAGCATCCGTGAAAGGTTT-AAAGGGTTGTAAAACTCTCAATAAG  Raphanus sativus cv Early Scarlet Globe
EX903313       --> CACTGGA...........................................  Raphanus sativus cv Rat-Tail Radish #3870
FD572007       --> CACTGGAGCATCCGTGAAAG-TTT-AAAGGGTTGTAAA-CTCTCAA....  Raphanus sativus cv Early Scarlet Globe
EX757979       --> GACTGGAGCATCCGTGA.................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538135       --> AACTGGAGCATCCGTGAAAGGTTT-AAAGGGTTGTAAAACTCTCAATAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567158       --> CACTGGAGCATCCGTGAAAGGTTT-AAAGGGTTGTAAAACACTCAATAAG  Raphanus raphanistrum subsp. landra
EY905156       --> GACTGGAGCATCCGTG..................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX897108       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD578959       --> CACGGGAGCATCCGTGAAAG-TTT-AAAGGGTTGTAAAACTCTCAATAAG  Raphanus sativus cv Rat-Tail Radish #3870
EY949513       --> CACTGGAGCATCCGTGAAA...............................  Raphanus sativus cv Rat-Tail Radish #3870
EY924044       --> CACTGGAGCATCCGTGA.................................  Raphanus raphanistrum subsp. landra
EX764334       --> CACTGGAGCATCCGTGAAAGGTTT-AAAGGGTTGTAAAACTCTCAACAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536077       --> TACTGGAGCATCCGTGAAAGGTTT-AAAGGGT..................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535549       --> GACTGGAGCATCCGTGAAAGGTTTTAAAGGGTTGTAAAACTCTCAATAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550045       --> CACTGGAGCATCCGTGAAAGGTTT-AAAGGGTTGTAAAACACTCAATAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570428       --> CACTGGAGCATCCGTGAAAGGTTT-AAAGGGTTGTAAAACTCTCAATAAG  Raphanus sativus cv Early Scarlet Globe
EX895632       --> CACTGGAGCATCCGTGAAAGGTTT-AAAGGGTTGTAAAACTCTCAATGAG  Raphanus sativus cv Early Scarlet Globe
FD558265       --> CACTGGAGCATCCGTGAAAGGTTT-AAAGGGTTGTAAAACACTCAATAAG  Raphanus raphanistrum subsp. landra
EX755027       --> TACTGGAGCATCCGTGAAAGGTTT-AAAGGGTTGTAAAACTCTCAATAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907249       --> TACTGGAGCATCCGTGAAAGGTTT-AAAGGGTTGTAAAACCCTCAATAAG  Raphanus raphanistrum subsp. raphanistrum (MS)

               701    -    751
UN22073        --> GATCCTGATCC-TAAAAACCCAATAGAGGGTCAAGAAGACAGGGATGCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540200       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901651       <-- GATCCTGATCC-TAAAAACCCAATTGAGGGTCAAGAAGACAGGGATGCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX777412       <-- GATCCTGATCC-TAAAAACCCAATAGAGGGTCAAGAAAACAGGGATGCAG  Raphanus raphanistrum subsp. landra
EX768271       <-- GATCCTGATCC-TAAAAACCCAATTGAGGGTCAAGAAGACAGGGATGCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761431       <-- GATCCTGATCC-TAAAAACCCAATTGAGGGTCAAGAAGACAGGGATGCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV545403       <-- GATCCTGATCC-TAAAAACCCAATAGAGGGTCAAGAAGACAGGGATGCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901742       <-- GATCCTGATCC-TAAAAACCCAATAGAGGGTCAAGAAGACAGGGATGCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919760       <-- GATCCTGATCC-TAAAAACCCAATAGAGGGTCAAGAAGACAGGGATGCAG  Raphanus raphanistrum subsp. landra
EX775239       <-- GATCCTGATCC-TAAAAACCCAATAGAGGGTCAAGAAGACAGGGATGCAG  Raphanus raphanistrum subsp. landra
EV572148       <-- GATCCTGATCC-TAAAAACCCAATAGAGGGTCAAGAAGACAGGGATGCAG  Raphanus raphanistrum subsp. landra
EX899679       <-- GATCCTGATCC-TAAAAACCCAATCGAGGGTCAAGAAGACAGGGATGCAG  Raphanus sativus cv Early Scarlet Globe
EY945015       <-- GATCCTGATCC-TAAAAACCCAATCGAGGGTCAAGAAGACAGGGATGCAG  Raphanus sativus cv Rat-Tail Radish #3870
EY903536       <-- GATCCTGATCC-TAAAAACCCAATAGAGGGTCAAGAAGACAGGGATGCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900928       <-- GATCCTGATCC-TAAAAACCCAATCGAGGGTCAAGAAGACAGGGATGCAG  Raphanus sativus cv Early Scarlet Globe
EX759209       <-- GATCCTGATCC-TAAAAACCCAATAGAGGGTCAATAAGACAGGGATGCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD575739       <-- GATCCTGATCC-TAAAAACCCAATCGAGGGTCAAGAAGACAGGGATGCAG  Raphanus sativus cv Early Scarlet Globe
EY903240       <-- GATCCTGATCC-TAAAAACCCAATAGAGGGTCAAGAAGACAGGGATGCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574433       <-- GATCCTGATCC-TAAAAACCCAATCGAGGGTCAAGAAGACAGGGATGCAG  Raphanus sativus cv Early Scarlet Globe
EX903313       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD572007       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX757979       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538135       --> GATCCTGATCC-T.....................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567158       --> GATCCTGATCC-TAAAAACCCAATAGAGGGTCAAGAAGACAGGGATGCAG  Raphanus raphanistrum subsp. landra
EY905156       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX897108       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD578959       --> GATCCTGATCC-TAAAA-CCCAATTGAGGGTCA.................  Raphanus sativus cv Rat-Tail Radish #3870
EY949513       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY924044       --> ..................................................  Raphanus raphanistrum subsp. landra
EX764334       --> GATCCTGATCC-TAAAA-CCCAATTGAGGGTCAAGAAGACAGGGATGCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536077       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535549       --> GATCCTGATCCCTAAAAACCCAATTGAGGGTCAAGAAGACAGGGATGCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550045       --> GATCCTGATCC-TAAAAACCCAATAGAGGGTCAAGAAGACAGGGATGCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570428       --> GATCCTGATCC-TAAAAACCCAATCGAGGGTCAAGAAGACAGGGATGCAG  Raphanus sativus cv Early Scarlet Globe
EX895632       --> GATCCTGATCC-TAAAAACCCAATCGAGGGTCAAGAAGACAGGGATGCAG  Raphanus sativus cv Early Scarlet Globe
FD558265       --> GATCCTGATCC-TAAAAACCCAATAGAGGGTCAAGAAGACAGGGATGCAG  Raphanus raphanistrum subsp. landra
EX755027       --> GATCCTGATCC-TAAAAACCCAATAGAGGGTCAATAAGACAGGGATGCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907249       --> GATCCTGATCC-TAAAAACCCAATAGAGGGTCAAGAAGACAGGGATGCAG  Raphanus raphanistrum subsp. raphanistrum (MS)

               751    -    801
UN22073        --> TCACTTTTCCTGGATTT-GTGGATTGCGTCTATCTTGATGCCCCTAATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540200       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901651       <-- TCACTTTTCCTGGATTT-GTGGATTGCGTCTATCTTGATGCCCCTAACGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX777412       <-- TCACTTTTCCTGGATTT-GTGGATTGCGTCTATCTTGATGCACCTAATGA  Raphanus raphanistrum subsp. landra
EX768271       <-- TCACTTTTCCTGGATTT-GTGGATTGCGTCTATCTTGATGCCCCTAATGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761431       <-- TCACTTTTCCTGGATTT-GTGGATTGCGTCTATCTTGATGCCCCTAACGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV545403       <-- TCACTTTTCCTGGCTTT-GTGGATTGCGTCTATCTTGATGCCCCTAATGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901742       <-- TCACTTTTCCTGGATTT-GTGGATTGCGTCTATCTTGATGCCCCTAATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919760       <-- TCACTTTTCCTGGATTT-GTGGATTGCGTCTATCTTGATGCACCTAATGA  Raphanus raphanistrum subsp. landra
EX775239       <-- TCACTTTTCCTGGATTT-GTGGATTGCGTCTATCTTGATGCACCTAATGA  Raphanus raphanistrum subsp. landra
EV572148       <-- TCACTTTTCCTGGATTT-GTGGATTGCGTCTATCTTGATGCACCTAATGA  Raphanus raphanistrum subsp. landra
EX899679       <-- CCACTTTTCCTGGATTT-GTGGATTGCGTCTATCTTGATGCCCCTAACGA  Raphanus sativus cv Early Scarlet Globe
EY945015       <-- TCACTTTTCCTGGATTT-GTGGATTGCGTCTATCTTGATGCCCCTAACGA  Raphanus sativus cv Rat-Tail Radish #3870
EY903536       <-- TCACTTTTCCTGGATTT-GTGGATTGCGTCTATCTTGATGCCCCTAATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900928       <-- TCACTTTTCCTGGATTT-GTGGATTGCGTCTATCTTGATGCCCCTAACGA  Raphanus sativus cv Early Scarlet Globe
EX759209       <-- TCACTTTTCCTGGATTT-GTGGATTGCGTCTATCTTGATGCCCCTAATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD575739       <-- TCACTTTTCCTGGATTT-GTGGATTGCGTCTATCTTGATGCCCCTAACGA  Raphanus sativus cv Early Scarlet Globe
EY903240       <-- TCACTTTTCCTGGATTT-GTGGATTGCGTCTATCTTGATGCCCCTAATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574433       <-- TCACTTTTCCTGGATTT-GTGGATTGCGTCTATCTTGATGCCCCTAACGA  Raphanus sativus cv Early Scarlet Globe
EX903313       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD572007       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX757979       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538135       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567158       --> TCACTTTTCCTGGATTT-GTGGATTGCGTCTATCTTGATGCACCTAATGA  Raphanus raphanistrum subsp. landra
EY905156       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX897108       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD578959       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY949513       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY924044       --> ..................................................  Raphanus raphanistrum subsp. landra
EX764334       --> TCACTTTTCCTGGATTT-GTGGAT-GCGTCTATCTTGATGCCC-TAATGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536077       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535549       --> TCACTTTTCCTGGATTTTGTGGATTGCGTCTATCTTGATGCCCCTAACGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550045       --> TCACTTTTCCTGGCTTT-GTGGATTGCGTCTATCTTGATGCCCCTAATGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570428       --> TCACTTTTCCTGGATTT-GTGGATTGCGTCTATCTTGATGCCCCTAACGA  Raphanus sativus cv Early Scarlet Globe
EX895632       --> CCACTTTTCCTGGATTT-GTGGATTGCGTCTATCTTGATGCCCCTAACGA  Raphanus sativus cv Early Scarlet Globe
FD558265       --> TCACTTTTCCTGGATTT-GTGGATTGCGTCTATCTTGATGCACCTAATGA  Raphanus raphanistrum subsp. landra
EX755027       --> TCACTTTTCCTGGATTT-GTGGATTGCGTCTATCTTGATGCCCCTAATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907249       --> TCACTTTTCCTGGATTT-GTGGATTGCGTCTATCTTGATGCCCCTAATGA  Raphanus raphanistrum subsp. raphanistrum (MS)

               801    -    851
UN22073        --> ATTGCACTTTGATAATGGCTTGGG-TGATCAAATAATCATCAAAAACACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540200       <-- ..................................................
EY901651       <-- ATTGCACTTTGATAATGGCTTGGG-TGATCAAATAATCATCAAAAACACC
EX777412       <-- ATTGCACTTTGATAATGGCTTGGG-TGATCAAATAATCATCAAAAACACC
EX768271       <-- ATTGCACTTTGATAATGGCTTGGG-TGATCAAATAATCATCAAAAACACC
EX761431       <-- ATTGCACTTTGATAATGGCTTGGG-TGATCAAATAATCATCAAAAACACC
EV545403       <-- ATTGCACTTTAATAATGGCTTGGG-TGATCAAATAATCATCAAAAACACC
EY901742       <-- ATTGCACTTTGATAATGGCTTGGG-TGATCAAATAATCATCAAAAACACC
EY919760       <-- ATTGCACTTTGATAATGGCTTGGG-TGATCAAATAATCATCAAAAACACC
EX775239       <-- ATTGCACTTTGATAATGGCTTGGG-TGATCAAATAATCATCAAAAACACC
EV572148       <-- ATTGCACTTTGATAATGGCTTGGG-TGATCAAGTAATCATCAAAAACACC
EX899679       <-- ATTGCACTTTGATAATGGCTTGGG-TGATCAAATAATCATCAAAAACACC
EY945015       <-- ATTGCACTTTGATAATGGCTTGGG-TGATCAAATAATCATCAAAAACACC
EY903536       <-- ATTGCACTTTGATAATGGCTTGGG-TGATCAAATAATCATCAAAAACACC
EX900928       <-- ATTGCACTTTGATAATGGCTTGGG-TGATCAAATAATCATCAAAAACACC
EX759209       <-- ATTGCACTTTGATAATGGCTTGGG-TGATCAAATAATCATCAAAAACACC
FD575739       <-- ATTGCACTTTGATAATGGCTTGGG-TGATCAAATAATCATCAAAAACACC
EY903240       <-- ATTGCACTTTGATAATGGCTTGGG-TGATCAAATAATCATCAAAAACACC
FD574433       <-- ATTGCACTTTGATAATGGCTTGGG-TGATCAAATAATCATCAAAAACACC
EX903313       --> ..................................................
FD572007       --> ..................................................
EX757979       --> ..................................................
EV538135       --> ..................................................
EV567158       --> ATTGCACTTTGATAATGGCTTGGG-TGATCAAGTAATCATC.........
EY905156       --> ..................................................
EX897108       --> ..................................................
FD578959       --> ..................................................
EY949513       --> ..................................................
EY924044       --> ..................................................
EX764334       --> ATTGCACTTTGATA-TGGCTTGG--TGATCAA-TAATCATCAAAA-CACC
EV536077       --> ..................................................
EV535549       --> ATTGCACTTTGAT.....................................
EV550045       --> ATTGCACTTTAATAATGGCTTGGG-TGATCAAATAATCATCAAAAACACC
FD570428       --> ATTGCACTTTGATAATGGCTTGGGGTGATCAAATAATCATCAAAAACACC
EX895632       --> ATTGCACTTTGATAATGGCTTGGG-TGATCAAATAATCATCAAAAACACC
FD558265       --> ATTGCACTTTGATAATGGCTTGGG-TGATCAAATAATCATCAAAAACACC
EX755027       --> ATTGCACTTTGATAATGGCTTGGG-TGATCAAATAATCATCAAAAACACC
EY907249       --> ATTGCACTTTGATAATGGCTTGGG-TGATCAAATAATCATCAAAAACACC

               851    -    901
UN22073        --> AACTGGTCGGATGCTGTCTTGTGGAACCCGCATGTTCAGATGGAAGCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540200       <-- ..................................................
EY901651       <-- AACTGGTCGGATGCTGTCTTGTGGAACCCGCATGTTCAAATGGAAGCTTG
EX777412       <-- AACTGGTCGGATGCTGTCTTGTGGAACCCGCATGTTCAGATGGAAGCTTG
EX768271       <-- AACTGGTCGGATGCTGTCTTGTGGAACCCACATGTTCAGATGGAAGCTTG
EX761431       <-- AACTGGTCGGATGCTGTCTTGTGGAACCCGCATGTTCAAATGGAAGCTTG
EV545403       <-- AACTGGTCGGATGCTGTCTTGTGGAACCCGCATGTTCAGATGGAAGCTTG
EY901742       <-- GACTGGTCGGATGCTGTCTTGTGGAACCCGCATGTACAGATGGAAGCTTG
EY919760       <-- AACTGGTCGGATGCTGTCTTGTGGAACCCGCATGTTCAGATGGAAGCTTG
EX775239       <-- AACTGGTCGGATGCTGTCTTGTGGAACCCGCATGTTCAGATGGAAGCTTG
EV572148       <-- AACTGGTCGGATGCTGTCTTGTGGAACCCGCATGTTCAGATGGAAGCTTG
EX899679       <-- AACTGGTCGGATGCTGTCTTGTGGAACCCGCATGTTCAGATGGAAGCTTG
EY945015       <-- AACTGGTCGGATGCTGTCTTGTGGAACCCGCATGTTCAGATGGAAGCTTG
EY903536       <-- AACTGGTCGGATGCCGTCTTGTGGAACCCGCATGTACAGATGGAAGCTTG
EX900928       <-- AACTGGTCGGATGCTGTCTTGTGGAACCCGCATGTTCAGATGGAAGCTTG
EX759209       <-- AACTGGTCGGATGCTGTCTTGTGGAACCCGCATGTACAGATGGAAGCCTG
FD575739       <-- AACTGGTCGGATGCTGTCTTGTGGAACCCGCATGTTCAGATGGAAGCTTG
EY903240       <-- AACTGGTCGGATGCTGTCTTGTGGAACCCGCATGTACAGATGGAAGCTTG
FD574433       <-- AACTGGTCGGATGCTGTCTTGTGGAACCCGCATGTTCAGATGGAAGCTTG
EX903313       --> ..................................................
FD572007       --> ..................................................
EX757979       --> ..................................................
EV538135       --> ..................................................
EV567158       --> ..................................................
EY905156       --> ..................................................
EX897108       --> ..................................................
FD578959       --> ..................................................
EY949513       --> ..................................................
EY924044       --> ..................................................
EX764334       --> AACTGGTCGGATGCTGTCTTGT............................
EV536077       --> ..................................................
EV535549       --> ..................................................
EV550045       --> AACTGGTCGGATGCTGTCTTGTGGAACCCGCATGTTCAGATGGAAGCTTG
FD570428       --> AACTGGTCGGATGCTGTCTTGTGGAACCCGCATGTTCAGATGGAAGCTTG
EX895632       --> AACTGGTCGGATGCTGTCTTGTGGAACCCGCATGTTCAGATGGAAGCTTG
FD558265       --> AACTGGTCGGATGCTGTCTTGTGGAGCCCGCATGTTCAGATGGAAGCTTG
EX755027       --> AACTGGTCGGATGCTGTCTTGTGGAACCCGCATGTACAGATGGAAGCCTG
EY907249       --> AACTGGTCGGATGCTGTCTTGTGGAACCCGCATGTACAGATGGAAGCTTG

               901    -    951
UN22073        --> TTACAGAGACTTTGTCTGCGTTGAAAATGCAAAGCTTGGGGATGTCAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540200       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901651       <-- TTACAGAGACTTCGTCTGCGTTGAAAATGCAAAGCTTGGGGATATCAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX777412       <-- TTACAGAGACTTTGTTTGCGTTGAAAATGCAAAGCTTGGGGATGTCAAGC  Raphanus raphanistrum subsp. landra
EX768271       <-- TTACAGAGACTTTGTCTGCGTGGAAAATGCAAAGGTTGGGGATGTCAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761431       <-- TTACAGAGACTTCGTCTGCGTTGAAAATGCAAAGCTTGGGGATATCAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV545403       <-- TTACAGAGACTTCGTCTGCGTTGAAAATGCAAAGCTTGGGGATGTCAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901742       <-- TTACAGAGACTTTGTCTGCGTTGAAAATGCAAAGCTTGGGGATGTCAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919760       <-- TTACAGAGACTTTGTCTGCGTTGAAAATGCAAAGCTTGGGGATGTCAAGC  Raphanus raphanistrum subsp. landra
EX775239       <-- TTACAGAGACTTTGTCTGCGTTGAAAATGCAAAGCTTGGGGATGTCAAGC  Raphanus raphanistrum subsp. landra
EV572148       <-- TTACAGAGACTTTGTCTGCGTTGAAAATGCAAAGCTTGGGGATGTCAAGC  Raphanus raphanistrum subsp. landra
EX899679       <-- TTACAGAGACTTTGTCTGCGTGGAAAATGCAAAGCTTGGGGATGTCAAGC  Raphanus sativus cv Early Scarlet Globe
EY945015       <-- TTACAGAGACTTTGTCTGCGTGGAAAATGCAAAGCTTGGGGATGTCAAGC  Raphanus sativus cv Rat-Tail Radish #3870
EY903536       <-- TTACAGAGACTTTGTCTGCGTTGAAAATGCAAAGCTTGGGGATGTCAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900928       <-- TTACAGAGACTTTGTCTGCGTGGAAAATGCAAAGCTTGGGGATGTCAAGC  Raphanus sativus cv Early Scarlet Globe
EX759209       <-- TTACAGAGACTTTGTTTGCGTTGAAAATGCAAAGCTTGGGGATGTCAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD575739       <-- TTACAGAGACTTTGTTTGCGTGGAAAATGCAAAGCTTGGGGATGTCAAGC  Raphanus sativus cv Early Scarlet Globe
EY903240       <-- TTACAGAGACTTTGTCTGCGTTGAAAATGCAAAGCTTGGGGATGTCAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574433       <-- TTACAGAGACTTTGTTTGCGTGGAAAATGCAAAGCTTGGGGATGTCAAGC  Raphanus sativus cv Early Scarlet Globe
EX903313       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD572007       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX757979       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538135       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567158       --> ..................................................  Raphanus raphanistrum subsp. landra
EY905156       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX897108       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD578959       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY949513       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY924044       --> ..................................................  Raphanus raphanistrum subsp. landra
EX764334       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536077       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535549       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550045       --> TTACAGAGACTTCGTCTGCGTTGAAAATGCAAAGCTTGGGGATGTCAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570428       --> TTACAGAGACTTTGTCTGCGTGGAAAATGCAAAGCTTGGGGATGTCAAGC  Raphanus sativus cv Early Scarlet Globe
EX895632       --> TTACAGAGACTTTGTCTGCGTGGAAAATGCAAAGCTTGGGGATGTCAAGC  Raphanus sativus cv Early Scarlet Globe
FD558265       --> TTACAGAGACTTTGTCTGCGTTGAAAATGCAAAGCTTGGGGATGTCAAGC  Raphanus raphanistrum subsp. landra
EX755027       --> TTACAGAGACTTTGTCTGCGTTGAAAATGCAAAGCTTGGGGATGTCAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907249       --> TTACAGAGACTTTGTCTGCGTTGAAAATGCAAAGCTTGGGGATGTCAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)

               951    -   1001
UN22073        --> TCGAGCCGGGACAGTCTTGGACAGCAACACAGCTTCTCAGCATCAGTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540200       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901651       <-- TCGAGCCGGGACAGTCTTGGACAGCAGCACAGCTTCTCAGCATCAGTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX777412       <-- TCGAGCCGGGACAGTCTTGGACAGCAACACAACTTTTCAGCATCAGTTGA  Raphanus raphanistrum subsp. landra
EX768271       <-- TCGAGCCTGGACAGTCCTGGACAGCAACACAGCTTTTCAGCCTCAGTT-A  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761431       <-- TCGAGCCGGGACAGTCTTGGACAGCAGCACAGCTTCTCAGCATCAGTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV545403       <-- TCGAGCCGGGACAGTCTTGGACAGCAACACAGCTTCTCAGCATCAGTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901742       <-- TCGAGCCGGGACAGTCTTGGACAGCAACACAGCTTCTCAGCATCAGTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919760       <-- TCGAGCCGGGACAGTCTTGGACAGCAACACAACTTCTCAGCATCAGTTGA  Raphanus raphanistrum subsp. landra
EX775239       <-- TCGAGCCGGGACAGTCTTGGACAGCAACACAACTTTTCAGCATCAGTTGA  Raphanus raphanistrum subsp. landra
EV572148       <-- TCGAGCCGGGACAGTCTTGGACAGCAACACAACTTCTCAGCATCAGTTGA  Raphanus raphanistrum subsp. landra
EX899679       <-- TGGAGCCGGGACAGTCTTGGACAGCAACACAGCTTCTCAGCATCAGTTGA  Raphanus sativus cv Early Scarlet Globe
EY945015       <-- TGGAGCCGGGACAGTCTTGGACAGCAACACAGCTTCTCAGCATCAGTTGA  Raphanus sativus cv Rat-Tail Radish #3870
EY903536       <-- TCGAGCCGGGACAGTCTTGGACAGCAACACAGCTTCTCAGCATCAGTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900928       <-- TGGAGCCGGGACAGTCTTGGACAGCAACACAGCTCCTCAGCATCAGTTGA  Raphanus sativus cv Early Scarlet Globe
EX759209       <-- TCGAGCCGGGACAGTCTTGGACAGCAGCACAGCTTTTCAGCATCAGTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD575739       <-- TGGAGCCGGGACAGTCTTGGACAGCAACACAGCTTTTCAGCATCAGTTGA  Raphanus sativus cv Early Scarlet Globe
EY903240       <-- TCGAGCCGGGACAGTCTTGGACAGCAACACAGCTTCTCAGCATCAGTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574433       <-- TGGAGCCGGGACAGTCTTGGACAGCAACACAGCTTTTCAGCATCAGTTGA  Raphanus sativus cv Early Scarlet Globe
EX903313       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD572007       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX757979       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538135       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567158       --> ..................................................  Raphanus raphanistrum subsp. landra
EY905156       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX897108       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD578959       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY949513       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY924044       --> ..................................................  Raphanus raphanistrum subsp. landra
EX764334       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536077       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535549       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550045       --> TCGAGCCGGGACAGTCTTGGACAGCAACACAGCTTCTCAGCATCAGTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570428       --> TGGAGCCGGGACAGTCTTGGACAGCAACACAGCTTCTCAGCATCAGTTGA  Raphanus sativus cv Early Scarlet Globe
EX895632       --> TGGAGCCGGGACAGTCTTGGACAGCAACACAGCTTCTCAGCATCAGTTGA  Raphanus sativus cv Early Scarlet Globe
FD558265       --> TCGAGCCGGGACAGTCTTGGACAGCAACACAACTTCTCAGCATCAGTTGA  Raphanus raphanistrum subsp. landra
EX755027       --> TCGAGCCGGGACAGTCTTGGACAGCAGCACAGCTTCTCAGCATCAGTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907249       --> TCGAGCCGGGACAGTCTTGGACAGCAACACAGCTTCTCAGCATCAGTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)

               1001   -   1051
UN22073        --> AAACAACAACAACAATT-GTACTTCTAACTTTTTTTTT----T-GTT-A-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540200       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901651       <-- AAACAACAACAACAATT-GTACTTCTAACTTTTTTTTT--CTT-GTT-A-  Raphanus raphanistrum subsp. raphanistrum (MS)
EX777412       <-- AAACAACAACAACAATTTGTACTTCTAACTTTTTTTTT----T-GTT-A-  Raphanus raphanistrum subsp. landra
EX768271       <-- AAACAACAAC---AATT-GTACTTCTAACTTTTTTTTT----G-GTT-A-  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761431       <-- AAACAACAACAACAATT-GTACTTCTAACTTTTTTTTT--CTT-GTT-A-  Raphanus raphanistrum subsp. raphanistrum (MS)
EV545403       <-- AAACAACAACAACAATT-GTACTTCTAACTTTTTTTTTCTTTT-GTT-A-  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901742       <-- AAACAACAACAACAATT-GTACTTCTAACTTTTTTTTT----T-GTT-AA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919760       <-- AAACAACAACAACAATTTGTACTTCTAACTTTTTTTTT------GTT-A-  Raphanus raphanistrum subsp. landra
EX775239       <-- AAACAACAACAACAATTTGTACTTCTAACTTTTTTTTT----T-GTT-A-  Raphanus raphanistrum subsp. landra
EV572148       <-- AAACAACAACAACAATTTGTACTTCTAACTTTTTTTTT----TTGTT-A-  Raphanus raphanistrum subsp. landra
EX899679       <-- AAACAACAACAACAATT-GTACTTGTAACTTTTTTTTT----C-GTT-A-  Raphanus sativus cv Early Scarlet Globe
EY945015       <-- AAACAACAACAACAATT-GTACTTGTAACTTTTTTTTT----C-GTT-A-  Raphanus sativus cv Rat-Tail Radish #3870
EY903536       <-- AAACAACAACAACAATT-GTACTTCTAACTTTTTTTTT----G-TTA-A-  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900928       <-- AAACAACAACAACAATT-GTACTTGTAACTTTTTTTTT----C-GTT-A-  Raphanus sativus cv Early Scarlet Globe
EX759209       <-- AAACAACAACAACAATT-GTACTTTTAACTTTTTTTTT----T-GTT-AA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD575739       <-- AAACAACAACAACAATT-GTACTTGTAACTTTTTTTTT----C-GTT-A-  Raphanus sativus cv Early Scarlet Globe
EY903240       <-- AAACAACAACAACAATT-GTACTTCTAACTTTTTTTTT----TTGTTAA-  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574433       <-- AAACAACAACAACTATT-GTACTTGTAACTTTTTTTTT----C-GTT-A-  Raphanus sativus cv Early Scarlet Globe
EX903313       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD572007       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX757979       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538135       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567158       --> ..................................................  Raphanus raphanistrum subsp. landra
EY905156       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX897108       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD578959       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY949513       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY924044       --> ..................................................  Raphanus raphanistrum subsp. landra
EX764334       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536077       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535549       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550045       --> AAA...............................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570428       --> AA-CAACAc.........................................  Raphanus sativus cv Early Scarlet Globe
EX895632       --> AAACAACAACAACAATT-GTACTTGTAACTTTTTTTTT----C-GTT-A-  Raphanus sativus cv Early Scarlet Globe
FD558265       --> AAACAACAACAACAATTTGTACTTCTAACTTTTTTTTT------GTT-A-  Raphanus raphanistrum subsp. landra
EX755027       --> AAACAACAACAACAATT-GTACTTCTAACTTTTTTTTT----TTGTTAA-  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907249       --> AAACAACAACAACAATT-GTACTTCTAACTTTTTTTTT----TTGTTAA-  Raphanus raphanistrum subsp. raphanistrum (MS)

               1051   -   1101
UN22073        --> TATTATTGTTGGATGTATCCCATTTCCATAAGCAATAAAAAGTTTGTA-T
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540200       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901651       <-- TATTATTGTTGGATGTATCCCATTTCCATAAGCAATAAAAAGTTTGTA-T  Raphanus raphanistrum subsp. raphanistrum (MS)
EX777412       <-- TATTATTGTTGGATGTATCTCATTTCCGTAAGCAATAAAAAGTTTGTA-T  Raphanus raphanistrum subsp. landra
EX768271       <-- TATTATTGTTGGATGTATCCCATTTCCATAAGCAATAAAAAGTTTGTA-T  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761431       <-- TATTATTGTTGGATGTATCCCATTTCCATAAGCAATAAAAAGTTTGTA-T  Raphanus raphanistrum subsp. raphanistrum (MS)
EV545403       <-- TATTATTGTTGGATGTATCCCATTTCCATAAGCAATAAAA-GTTTGTA-T  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901742       <-- AATTATTGTTGGATGTATCCTATTTCCATAAGCAATAAAA-GTTTGTA-T  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919760       <-- TATTATTGTTGGATGTATCTCATTTCCGTAAGCAATAAAAAGTTTGTA-T  Raphanus raphanistrum subsp. landra
EX775239       <-- TATTATTGTTGGATGTATCTCATTTCCGTAAGCAATAAAAAGTTTGTA-T  Raphanus raphanistrum subsp. landra
EV572148       <-- TATTATTGTTGGATGTATCTCATTTCCGTAAGCAATAAAAAGTTTGTA-T  Raphanus raphanistrum subsp. landra
EX899679       <-- TATTATTGTTGGATGTATCCCATTTCCATAAGCAATAAAAAGTTTGTAat  Raphanus sativus cv Early Scarlet Globe
EY945015       <-- TATTATTGTTGGATGTATCCCATTTCCATAAGCAATAAAAAGTTTGTAat  Raphanus sativus cv Rat-Tail Radish #3870
EY903536       <-- AATTATTGTTGGATGTATCCTATTTCCATAAGCAATAAAA-GTTTGTA-T  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900928       <-- TATTATTGTTGGATGTATCCCATTTCCATAAGCAATAAAAAGTTTGTAAT  Raphanus sativus cv Early Scarlet Globe
EX759209       <-- AATTATTGTTGGATGTATCCTATTTCCATAAGCAATAAAA-GTTTGTA-T  Raphanus raphanistrum subsp. raphanistrum (MS)
FD575739       <-- TATTATTGTTGGATGTATCCCATTTCCATAAGCAATAAAAAGTTTGT...  Raphanus sativus cv Early Scarlet Globe
EY903240       <-- AATTATTGTTGGATGTATCCTATTTCCATAAGCAATAAAA-GTTTGTA-T  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574433       <-- TATTATTGTTGGATGTATCCCATTTCCATAAGCAATAAAAAGTTTGTAat  Raphanus sativus cv Early Scarlet Globe
EX903313       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD572007       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX757979       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538135       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567158       --> ..................................................  Raphanus raphanistrum subsp. landra
EY905156       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX897108       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD578959       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY949513       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY924044       --> ..................................................  Raphanus raphanistrum subsp. landra
EX764334       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536077       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535549       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550045       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570428       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX895632       --> TATTATTGTTGGATGTATCCCATTTCCATAAGCAATAAAAAGTTTGTAat  Raphanus sativus cv Early Scarlet Globe
FD558265       --> TATTATTGTTGGATGTATCTCATTTCCGTAAGCAATAAAAA.........  Raphanus raphanistrum subsp. landra
EX755027       --> AATTATTGTTGGATGTATCCTATTTCCATAAGCAATAAAA-GTTTGTA-T  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907249       --> AATTATTGTTGGATGTATCCTATTTCCATAAGCAATAAAA-GTTTGTA-T  Raphanus raphanistrum subsp. raphanistrum (MS)

               1101   -   1151
UN22073        --> TCACCAGTAGTCCCCACAAGTGCAATTGCCATCTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540200       <-- .....................................
EY901651       <-- TCACC................................
EX777412       <-- TCACCAGTAGTCCCCACAAGTGCAATTGCCATCTTTG
EX768271       <-- TCACCAG..............................
EX761431       <-- TCACC................................
EV545403       <-- TCACC................................
EY901742       <-- TCACCAGc.............................
EY919760       <-- TCACCAGTt............................
EX775239       <-- TCACCAGT.............................
EV572148       <-- TCACC................................
EX899679       <-- tc...................................
EY945015       <-- tc...................................
EY903536       <-- TCACC................................
EX900928       <-- TCACCAGc.............................
EX759209       <-- TCACCAG..............................
FD575739       <-- .....................................
EY903240       <-- TCACCAGc.............................
FD574433       <-- tc...................................
EX903313       --> .....................................
FD572007       --> .....................................
EX757979       --> .....................................
EV538135       --> .....................................
EV567158       --> .....................................
EY905156       --> .....................................
EX897108       --> .....................................
FD578959       --> .....................................
EY949513       --> .....................................
EY924044       --> .....................................
EX764334       --> .....................................
EV536077       --> .....................................
EV535549       --> .....................................
EV550045       --> .....................................
FD570428       --> .....................................
EX895632       --> tcaaaaa..............................
FD558265       --> .....................................
EX755027       --> TCACCAGaaaa..........................
EY907249       --> TCACCAGc.............................