RadishBase

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Alignment for radish unigene UN22095

               1      -     51
UN22095        --> GGGCAAACAGAAAAATCGTGTCTGCCTTTCTCTCATTTAAACAATAGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737470       <-- ..................................................
EY919386       <-- ..................................................
EV547252       <-- ..................................................
EV547341       <-- ..................................................
EX893628       <-- ..................................................
FD975120       <-- ..................................................
EV542038       <-- ..................................................
EV542153       <-- ..................................................
EX759003       <-- ..................................................
EX775667       <-- ..................................................
EY925857       <-- ..................................................
FD976907       <-- ..................................................
EV536481       --> GGGCAAACAGAAAAATCGTGTCTGCCTTTCTCTCATTTAAACAATAGTCT
FD978976       --> ....ggACAGAAAAATCGTGTCTGCCTTTCTCTCATTTAAACAAGAGTCT
FD981126       --> ..................................................
EV552418       --> ..................................................
EY923606       --> ..................................................
EV538058       --> ..................................................
EV552318       --> ..................................................
EY916860       --> ..................................................
EW733025       --> ..................................................

               51     -    101
UN22095        --> TTTTT-CAGTTTTGTTTTATTTTGTTTTGGGGCGTGTTTCACCTTAACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737470       <-- ..................................................
EY919386       <-- ..................................................
EV547252       <-- ..................................................
EV547341       <-- ..................................................
EX893628       <-- ..................................................
FD975120       <-- ..................................................
EV542038       <-- ..................................................
EV542153       <-- ..................................................
EX759003       <-- ..................................................
EX775667       <-- ..................................................
EY925857       <-- ..................................................
FD976907       <-- ..................................................
EV536481       --> TTTTT-CAGTTTTGTTTTATTTTGTTTTGGGGCGTGTTTCACCTTAACCA
FD978976       --> TTTTTTCAGTTTTGTTTTGTTTTGTTTTGGGGCGTGTTTCACCTTAACCA
FD981126       --> ................ggATTTTGTTTTGGGGCGTGTTTCACCTTAACCA
EV552418       --> ................gggTTTTGTTTTGGGGCGTGTTTCACCTTAACCA
EY923606       --> ................gggTTTTGTTTTGGGGCGTGTTTCACCTTAACCA
EV538058       --> .....................ggGTTTTGGGGCGTGTTTCACCTTAACCA
EV552318       --> .....................ggGTTTTGGGGCGTGTTTCGCCTTAACCA
EY916860       --> ..................................................
EW733025       --> ..................................................

               101    -    151
UN22095        --> TCGCCAGCTTCAACCGCCGGAGCTGCCGTAAGGAAGGCTCTTCATCGGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737470       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY919386       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV547252       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV547341       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893628       <-- ..................................................  Raphanus sativus var. oleiformis
FD975120       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542038       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542153       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759003       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX775667       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY925857       <-- ..................................................  Raphanus sativus var. oleiformis
FD976907       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536481       --> TCGTCAGCTTCAACCGCCGGAGCCGCCGTAAGGAAGGCTCTTCATCGGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978976       --> TCGCCAGCTTCAACCGCCGGAGCTGCCGTAAGGAAGGCTCTTCATCGGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981126       --> TCGCCAGCTTCAACCGCCGGAGCTGCCGTAAGGAAGGCTCTTCATCGGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV552418       --> TCGCCAGCTTCAACCGCCGGAGCTGCCGTAAGGAAGGCTCTTCATCGGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923606       --> ACGTCAGCTTCAACCGCCGGAGCCGCCGTAAGGAAGGCTCTTCATCGGCC  Raphanus raphanistrum subsp. landra
EV538058       --> TCGTCAGCTTCAACCGCCGGAGCTGCCGTAAGAAAGGCTCTTCATCGGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552318       --> TCGCCAGCTTCAACCGCCGGAGCTGCCGTAAGGAAGGCTCTTCATCGGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916860       --> .......CTTCAACCGCCGGAGCTGCCGTAAGGAAGGCTCTTCATCGGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW733025       --> .......ttcaacttGCCGGAGCCGCCGTAAGG---GCTCTTCATCGGCC  Raphanus sativus cv Rat-Tail Radish #3870

               151    -    201
UN22095        --> ATAACATATTTT-GTGGTCTATAAAGCTGTCGCC-TTTCTTGCCTTTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737470       <-- ..................................................
EY919386       <-- ..................................................
EV547252       <-- ..................................................
EV547341       <-- ..................................................
EX893628       <-- ..................................................
FD975120       <-- ..................................................
EV542038       <-- ..................................................
EV542153       <-- ..................................................
EX759003       <-- ..................................................
EX775667       <-- ..................................................
EY925857       <-- ..................................................
FD976907       <-- ..................................................
EV536481       --> ATAACATATTTTTGTGGTCTATAAAGCTGTCGCC-TTTCTTGCCTTTTCA
FD978976       --> ATAACATATTTT-GTGGTCTATAAAGCTGTCGCC-TTTCTTGCCTTTTCA
FD981126       --> ATAACATATTTT-GTGGTCTATAAAGCTGTCGCC-TTTCTTGCCTTTTCA
EV552418       --> ATAACATATTTT-GTGGTCTATAAAGCTGTCGCC-TTTCTTGCCTTTTCA
EY923606       --> ATAACATATTTTTGTGGTCTATAAAGC-GTCGCCCTTTCTTGCCTTTTCA
EV538058       --> ATAACATATTTTAGTGGTCTATAAAGC-GTCGCC-TTTCTTGCCTTTTCA
EV552318       --> ATAACATATTTT-GTGGTCTATAAAGCTGTCGCC-TTTCTTGCCTTTTCA
EY916860       --> ATAACATATTTT-GTGGTCTATAAAGCTGTCGCC-TTTCTTGCCTTTTCA
EW733025       --> ATAACATATTTTTGTGGTCTATAAAGC-GTCGCCCTTTCTTTCCTTTTCA

               201    -    251
UN22095        --> TACGGACTAGGAAATGGTTAAAAG---GCATGGAGAGTTTTGATTTACTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737470       <-- ...........AAATG-TTAAAAG---GCATGGAGAGTTTTGATTTACTA
EY919386       <-- .............................................TACTA
EV547252       <-- ............................................ctagag
EV547341       <-- ..................................................
EX893628       <-- ..................................................
FD975120       <-- ..................................................
EV542038       <-- ..................................................
EV542153       <-- ..................................................
EX759003       <-- ..................................................
EX775667       <-- ..................................................
EY925857       <-- ..................................................
FD976907       <-- ..................................................
EV536481       --> TACGGACTAGGAAATGGTTAAAAG---GCATGGAGAGTTTTGATTTACTA
FD978976       --> TACGGACTAGGAAATGGTTAAAAG---GCATGGAGAGTTTTGATTTACTA
FD981126       --> TACGGACTAGGAAATGGTTAAAAG---GCATGGAGAGTTTTGATTTACTA
EV552418       --> TACGGACTAGGAAATGGTTAAAAG---GCATGGAGAGTTTTGATTTACTA
EY923606       --> TACGGACTAGGAAATGGTTAAAAG---GCATGGAGAGTTTTGATTTACTA
EV538058       --> TACGGATTAGGAAATGGTTAAAAG---GCATGGAGAGTTTTGATTTACTA
EV552318       --> TACGGACTAGGAAATGGTTAAAAGCAGGCATGGAGAGTTTTGATTTACTA
EY916860       --> TACGGACTAGGAAATGGTTAAAAGCAGGCATGGAGAGTTTTGATTTACTA
EW733025       --> TACGGACTAGGAAATGGTTAAAAG---GCATGGAGAGTTTTGATTTACTA

               251    -    301
UN22095        --> GAGAG---ATCATGTCGCAGTGCGTAGACGGTTTTAGGCATGTATGCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737470       <-- GAGAG---ATCATGTCGCAGTGCGTAGACGGTTTTAAGCATGTATGCAAC
EY919386       <-- GAGAT---ATCATGTCGCAGTGCGTAGACGGTTT-AGGCATGTATGCAAC
EV547252       <-- agggG---ATCATGTCGCAGTGCGTAGACGGTTTTAGGCATGTATGCAAC
EV547341       <-- ....G---ATCATGTCGCAATGCGTAGACGGTTTTAGGCATGTATGCAAC
EX893628       <-- ...........................................ATGCA-C
FD975120       <-- ..................................................
EV542038       <-- ..................................................
EV542153       <-- ..................................................
EX759003       <-- ..................................................
EX775667       <-- ..................................................
EY925857       <-- ..................................................
FD976907       <-- ..................................................
EV536481       --> GAGAG---ATCATGTCGCAGTGCGTAGACGGTTTTAGGCATGTATGCAAC
FD978976       --> GAGAGGGGATCATGTCGCAGTGCGTAGACGGTTTTAGGCATGTATGCAAC
FD981126       --> GAGAGGGGATCGTGTCGCAGTGCGTAGACGGTTTTAGGCATGTATGCAAC
EV552418       --> GAGAGGGGATCATGTCGCAATGCGTAGACGGTTTTAGGCATGTATGCAAC
EY923606       --> GAGAT---ATCATGTCGCAGTGCGTAGACGGTTTTAGGCATGTATGCAAC
EV538058       --> GAGAGGGGATCATGTCGCAGTGCGTAGACGGTTTTAGGCATGTATGCAAC
EV552318       --> GAGAGGGGATCATGTCGCAGTGCGTAGACGGTTTTAGGCATGTATGCAAC
EY916860       --> GAGAGGGGATCATGTCGCAGTGCGTAGACGGTTTTAGGCATGTATGCAAC
EW733025       --> GAGAG---ATCATGTCGCAGTGCGTAGACGGTTTTAAGCATGTATGCAAC

               301    -    351
UN22095        --> TCTTTGTTGCGGTGTTTTGATATTGATATAGGCAAATCTTCTGGAGGCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737470       <-- TCTTTGTTGCGGTGTTTTGATATTGATATAGGCAAATCTTCTGGAGGCCC
EY919386       <-- TCTT-G-TGCGGTGTTTTGATAT-GATATAGGCAAATCTTCTGGAGGCCC
EV547252       <-- TCTTTGTTGCGGTGTTTTGATATTGATATAGGCAAATCTTCTGGAGGCCC
EV547341       <-- TCTTTGTTGCGGTGTTTTGATATTGATATAGGCAAATCTTCTGGAGGCCC
EX893628       <-- TCTTTGTTGCGGTGTTT-GATATTGATATAGGCAAATCTTCTGGAGGCCC
FD975120       <-- ..........................................GGAGGCCC
EV542038       <-- ..................................................
EV542153       <-- ..................................................
EX759003       <-- ..................................................
EX775667       <-- ..................................................
EY925857       <-- ..................................................
FD976907       <-- ..................................................
EV536481       --> TCTTTGTTGCGGTGTTTTGATATTGATATAGGCAAATCTTCTGGAGGCCC
FD978976       --> TCTTTGTTGCGGTGTTTTGATATTGATATAGGCAAATCTTCTGGAGGCCC
FD981126       --> TCTTTGTTGCGGTGTTTTGATATTGATATAGGCAAATCTTCTGGAGGCCC
EV552418       --> TCTTTGTTGCGGTGTTTTGATATTGATATAGGCAAATCTTCTGGAGGCCC
EY923606       --> TCTTTGTTGCGGTGTTTTGATATTGATATAGGCAAATCTTCTGGAGGCCC
EV538058       --> TCTTTGTTGCGGTGTTTTGATATTGATATAGGCAAATCTTCTGGAGGCCC
EV552318       --> TCTTTGTTGCGGTGTTTTGATATTGATATAGGCAAATCTTCTGGAGGCCC
EY916860       --> TCTTTGTTGCGGTGTTTTGATATTGATATAGGCAAATCTTCTGGAGGCCC
EW733025       --> TCTTTGTTGCGGTGTTTTGATATTGATATAGGCAAATCCTCTGGAGGCCC

               351    -    401
UN22095        --> TGGAGACCCTGAACTACTTGCCAGAGACACTGTTTTTGGCGTGAGTGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737470       <-- TGGAGACCCTGAACTACTTGCCAGAGACACTGTTTTTGGCGTGAGTGAAA
EY919386       <-- TGGAGACC-TGAACTACTTGCCAGAGACACTGTTTTTGGCGTGAGTGAAA
EV547252       <-- TGGAGACCCTGAACTACTTGCCAGAGACACTGTTTTTGGCGTGAGTGAAA
EV547341       <-- TGGAGACCCTGAACTACTTGCCAGAGACACTGTCTTTGGCGTGAGTGAAA
EX893628       <-- TGGAGACC-TGAACTACTTGCCAGAGACACTGTTTT-GGCGTGAGTGAAA
FD975120       <-- TGGAGACC-TGAACTACTTGCCAGAGACACTGTTTTTGGCGTGAGTGAAA
EV542038       <-- .....................................GGCGTGAGTGAAA
EV542153       <-- .....................................GGCGTGAGTGAAA
EX759003       <-- ..............................................GAAA
EX775667       <-- ..................................................
EY925857       <-- ..................................................
FD976907       <-- ..................................................
EV536481       --> TGGAGACCCTGAACTACTTGCCAGAGACACTGTTTTTGACGTGAGTGAAA
FD978976       --> TGGAGACCCTGAACTACTTGCCAGAGACACTGTTTTTGGCGTGAGTGAAA
FD981126       --> TGGAGACCCTGAACTACTTGCCAGAGACACTGTTTTTGGCGTGAGTGAAA
EV552418       --> TGGAGACCCTGAACTACTTGCCAGAGACACTGTCTTTGGCGTGAGTGAAA
EY923606       --> TGGAGACCCTGAACTACTTGCCAGAGACACTGTTTTTGGCGTGAGTGAAA
EV538058       --> TGGAGACCCTGAACTCCTTGCCAGAGACACTGTTTTTGGCGTGAGTGAAA
EV552318       --> TGGAGACCCTGAACTACTTGCCAGAGACACTGTTTTTGGCGTGAGTGAAA
EY916860       --> TGGAGACCCTGAACTACTTGCCAGAGACACTGTTTTTGGCGTGAGTGAAA
EW733025       --> TGGAGACCCTGAACTACTTGCCAGAGACACTGTTTTTGGCGTGAGTGAAA

               401    -    451
UN22095        --> TAGAAGCTCTCTATGAGCTGTTTAAAAAAATCAGCAGTGCGGTGATTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737470       <-- TAGAAGCTCTCTATGAGCTGTTTAAAAAAATCAGCAGTGCTGTGATTGAT  Raphanus sativus cv Rat-Tail Radish #3870
EY919386       <-- TAGAGACCCTCTATGAGCTGTTTAAAAAAATCAGCAGTGCTGTGATTGAT  Raphanus raphanistrum subsp. landra
EV547252       <-- TAGAAGCTCTCTATGAGCTGTTTAAAAAAATCAGCAGTGCGGTGATTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV547341       <-- TAGAAGCTCTCTATGAGCTGTTTAAAAAAATCAGCAGTGCGGTGATTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893628       <-- TAGAAGCTCTCTATGAGCTGTTTAAAAAAATCAGCAGTGCGGTGATTGAT  Raphanus sativus var. oleiformis
FD975120       <-- TAGAAGCTCTCTATGAGCTGTTTAAAAAAATCAGCAGTGCGGTGATTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542038       <-- TAGAGGCTCTCTATGAGCTGTTTAAAAAAATCAGCTGTGCTGTGATTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542153       <-- TAGAGGCTCTCTATGAGCTGTTTAAAAAAATCAGCAGTGCTGTGATTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759003       <-- TAGAAGCTCTCTATGAGCTGTTTAAAAAAATCAGCAGTGCTGTGATTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX775667       <-- ..............................TCAGCAGTGCTGTGATTGAT  Raphanus raphanistrum subsp. landra
EY925857       <-- ..................................................  Raphanus sativus var. oleiformis
FD976907       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536481       --> TAGAAGCTCTCTATGAGCTGTTTAAAAAAATCAGCAGTGCGGTGATTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978976       --> TAGAAGCTCTCTATGAGCTGTTTAAAAAAATCAGCAGTGCGGTGATTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981126       --> TAGAAGCTCTCTATGAGCTGTTTAAAAAAATCAGCAGTGCGGTGATTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV552418       --> TAGAAGCTCTCTATGAGCTGTTTAAAAAAATCAGCAGTGCGGTGATTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923606       --> TAGAGACCCTCTATGAGCTGTTTAAAAAAATCAGCAGTGCTGTGATTGAT  Raphanus raphanistrum subsp. landra
EV538058       --> TAGAGGCTCTCTATGAGCTGTTTAAAAAAATCAGCAGTGCTGTGATTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552318       --> TAGAAGCTCTCTATGAGCTGTTTAAAAAAATCAGCAGTGCGGTGATTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916860       --> TAGAAGCTCTCTACGAGCTGTTTAAAAAAATCAGCAGTGCGGTAATTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW733025       --> TAGAAGCTCTCTATGAGCTGTTTAAAAAAATCAGCAGTGCTGTGATTGAT  Raphanus sativus cv Rat-Tail Radish #3870

               451    -    501
UN22095        --> GATGGGCTAATAAACAAGGAAGAGTTTCAACTGGCCTTATTTAAGACAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737470       <-- GATGGACTAATAAACAAGGAAGAGTTTCAGCTGGCCTTATTCAAGACAAA  Raphanus sativus cv Rat-Tail Radish #3870
EY919386       <-- GATGGGCTAATAAACAAGGAAGAGTTTCAGCTGGCCTTATTTAAGACAAA  Raphanus raphanistrum subsp. landra
EV547252       <-- GATGGGCTAATAAACAAGGAAGAGTTTCAACTTGCCTTATTTAAGACAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV547341       <-- GATGGGCTAATAAACAAGGAAGAGTTTCAACTTGCCTTATTTAAGACAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893628       <-- GATGGGCTAATAAACAAGGAAGAGTTTCAACTGGCCTTATTTAAGACAAA  Raphanus sativus var. oleiformis
FD975120       <-- GATGGGCTAATAAACAAGGAAGAGTTTCAACTTGCCTTATTTAAGACAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542038       <-- GATGGGCTAATAAACAAGGAAGAGTTTCAACTGGCCTTATTTAAGACAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542153       <-- GATGGGCTAATAAACAAGGAAGAGTTTCAACTGGCCTTATTTAAGACAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759003       <-- GATGGGCTAATAAACAAGGAAGAGTTTCAGCTGGCCTTATTCAAGACAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX775667       <-- GATGGGCTAATAAACAAGGAAGAGTTTCAACTGGCCTTATTTAAGACAAA  Raphanus raphanistrum subsp. landra
EY925857       <-- ....GGCTAATAAACAAGGAAGAGTTTCAACTGGCCTTATTTAAGACAAA  Raphanus sativus var. oleiformis
FD976907       <-- .....GCTAATAAACAAGGAAGAGTTTCAACTTGCCTTATTTAAGACAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536481       --> GATGGGCTAATAAACAAGGAAGAGTTTCAACTGGCCCTATTTAAGACGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978976       --> GATGGGCTAATAAACAAGGAAGAGTTTCAACTTGCCTTATTTAAGACAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981126       --> GATGGGCTAATAAACAAGGAAGAGTTTCAACTTGCCTTATTTAAGACAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV552418       --> GATGGGCTAATAAACAAGGAAGAGTTTCAACTTGCCTTATTTAAGACAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923606       --> GATGGGCTAATAAACAAGGAAGAGTTTCAGCTGGCCTTATTTAAGACAAA  Raphanus raphanistrum subsp. landra
EV538058       --> GATGGGCTAATAAACAAGGAAGAGTTTCAACTGGCCTTATTTAAGACAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552318       --> GATGGGCTAATAAACAAGGAAGAGTTTCAACTTGCCTTATTTAAGACAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916860       --> GATGGGCTAATAAACAAGGAAGAGTTTCAACTTGCCTTATTTAAGACAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW733025       --> GATGGACTAATAAACAAGGAAGAGTTTCAGCTGGCCTTATTCAAGACAAA  Raphanus sativus cv Rat-Tail Radish #3870

               501    -    551
UN22095        --> TAAAAAA-GAGAGCTTGTTTGCAGACCGGGTGTTCGATTTGTTCGACACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737470       <-- TAAAAAA-GAGAGCTTGTTTGCAGACCGGGTGTTCGATTTGTTCGACACA
EY919386       <-- TAAAAAA-GAGAGCTTGTTTGCAGACCGGGTGTTCGATTTGTTCGACACA
EV547252       <-- TAAAAAA-GAGAGCTTGTTTGCAGACCGGGTGTTCGATTTGTTCGACACA
EV547341       <-- TAAAAAA-GAGAGCTTGTTTGCAGACCGGGTGTTCGATTTGTTCGACACA
EX893628       <-- TAAAAAA-GAGGGCTTGTTTGCAGACCGGGTGGTCGATTTGTTCGACACA
FD975120       <-- TAAAAAA-GAGAGCTTGTTTGCAGACCGGGTGTTCGATTTGTTCGACACA
EV542038       <-- TAAGAAA-GAGAGCTTGTTTGCAGACCGGGTGTTCGATTTGTTCGACACA
EV542153       <-- TAAGAAA-GAGAGCTTGTTTGCAGACCGGGTGTTCGATTTGTTCGACACA
EX759003       <-- TAAAAAA-GAGAGCTTATTTGCAGACCGGGTGTTCGATTTGTTCGACACA
EX775667       <-- TAAAAAAAGAGAGCTTGTTTGCAGACCGGGTGTTCGATTTGTTCGACACA
EY925857       <-- TAAAAAA-GAGAGCTTGTTTGCAGACCGGGTGTTCGATTCGTTCGACACA
FD976907       <-- TAAAAAA-GAGAGCTTGTTTGCAGACCGGGTGTTCGATTTGTTCGACACA
EV536481       --> TAAAAAA-GAAAGCTTGTTTGCAGACCGGGTGTTCGATTTGTTCGACACA
FD978976       --> TAAAAAA-GAGAGCTTGTTTGCAGACCGGGTGTTCGATTTGTTCGACACA
FD981126       --> TAAAAAA-GAGAGCTTGTTTGCAGACCGGGTGTTCGATTTGTTCGACACA
EV552418       --> TAAAAAA-GAGAGCTTGTTTGCAGACCGGGTGTTCGATTTGTTCGACACA
EY923606       --> TAAAAAA-GAGAGCTTGTTTGCAGACCGGGTGTTCGATTTGTTCGACACA
EV538058       --> TAAGAAA-GAGAGCTTGTTTGCAGACCGGGTGTTCGATTTGTTCGACACA
EV552318       --> TAAAAAA-GAGAGCTTGTTTGCAGACCGGGTGTTCGATTTGTTCGACACA
EY916860       --> TAAAAAA-GAGAGCTTGTTTGCAGACCGGGTGTTCGATTTGTTCGACACA
EW733025       --> TAAAAAA-GAGAGCTTGTTTGCAGACCGGGTGTTCGATTTGTTCGACACA

               551    -    601
UN22095        --> AAGCATAATGGAATACTGGGGTTTGAGGAGTTTGCTCGTGCT-CTCTCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737470       <-- AAGCATAATGGAATACTGGGGTTTGAGGAGTTTGCTCGTGCT-CTCTCCG  Raphanus sativus cv Rat-Tail Radish #3870
EY919386       <-- AAGCATAATGGAATACTGGGGTTTGAGGAGTTTGCTCGTGCT-CTCTCCG  Raphanus raphanistrum subsp. landra
EV547252       <-- AAGCATAACGGAATACTGGGGTTTGAGGAGTTTGCTCGTGCT-CTCTCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV547341       <-- AAGCATAACGGAATACTGGGGTTTGAGGAGTTTGCTCGTGCT-CTCTCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893628       <-- AAGCATAATGGAATACTGGGGTTTGAGGAGTTTGCTCGTGCT-CTCTCCG  Raphanus sativus var. oleiformis
FD975120       <-- AAGCATAACGGAATACTGGGGTTTGAGGAGTTTGCTCGTGCT-CTCTCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542038       <-- AAGCATAATGGAATACTGGGGTTTGAGGAGTTTGCTCGTGCT-CTCTCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542153       <-- AAGCATAATGGAATACTGGGGTTTGAGGAGTTTGCTCGTGCT-CTCTCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759003       <-- AAGCATAATGGAATACTGGGGTTTGAGGAGTTTGCTCGTGCT-CTCTCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX775667       <-- AAGCATAGTGGAATACTGGGGTTTGAGGAGTTTGCTCGTGCT-CTCTCCG  Raphanus raphanistrum subsp. landra
EY925857       <-- AAGCATAATGGAATACTGGGGTTTGAGGAGTTTGCTCGTGCT-CTCTCCG  Raphanus sativus var. oleiformis
FD976907       <-- AAGCATAACGGAATACTGGGGTTTGAGGAGTTTGCTCGTGCTGCTCTCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536481       --> AAGCATAATGGAATACTGGGGTTTGAGGAGTTTGCTCGTGCT-CTCTCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978976       --> AAGCATAACGGAATACTGGGGTTTGAGGAGTTTGCTCGTGCT-CTCTCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981126       --> AAGCATAACGGAATACTGGGGTTTGAGGAGTTTGCTCGTGCTGCTCTCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV552418       --> AAGCATAACGGAATACTGGGGTTTGAGGAGTTTGCTCGTGCT-CTCTCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923606       --> AAGCATAATGGAATACTGGGGTTTGAGGAGTTTGCTCGTGCT-CTCTCCG  Raphanus raphanistrum subsp. landra
EV538058       --> AAGCATAATGGAATACTGGGGTTTGAGGAGTTTGCTCGTGCT-CTCTCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552318       --> AAGCATAACGGAATACTGGGGTTTGAGGAGTTTGCTCGTGCT-CTCTCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916860       --> AAGCATAACGGAATACTGGGGTTTGAGGAGTTTGCTCGTGCT-CTCTCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW733025       --> AAGCATAATGGAATACTGGGGTTTGAGGAGTTTGCTCGTGCT-CTCTCCG  Raphanus sativus cv Rat-Tail Radish #3870

               601    -    651
UN22095        --> TTTTTCATCCAGATGCTCCTATTGATAACAAGATTGACTTTTCGTTTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737470       <-- TTTTTCATCCAGATGCTCCTATTGATAACAAGATTGACTTTTCGTTTCAG
EY919386       <-- TTTTTCATCCAGATGCTCCTATTGATAACAAGATTGACTTTTCGTTTCAG
EV547252       <-- TTTTTCATCCAGATGCTCCTATTGATAACAAGATTGACTTTTCGTTTCAG
EV547341       <-- TTTTTCATCCAGATGCTCCTATTGATAACAAGATTGACTTTTCGTTTCAG
EX893628       <-- TTTTTCATCCAGATGCTCCTATTGATAACAAGATTGACTTTTCGTTTCAG
FD975120       <-- TTTTTCATCCAGATGCTCCTATTGATAACAAGATTGACTTTTCGTTTCAG
EV542038       <-- TTTTTCATCCAGATGCTCCTATTGATAACAAGATTGACTTTTCGTTTCAG
EV542153       <-- TTTTTCATCCAGATGCTCCTATTGATAACAAGATTGACTTTTCGTTTCAG
EX759003       <-- TTTTTCATCCAGATGCTCCTATTGATAACAAGATTGACTTTTCGTTTCAG
EX775667       <-- TTTTTCATCCAGATGCTCCTATTGATAACAAGATTGACTTTTCGTTTCAT
EY925857       <-- TTTTTCATCCAGATGCTCCTATTGATAACAAGATTGACTTTTCGTTTCAG
FD976907       <-- TTTTTCATCCAGATGCTCCTATTGATAACAAGATTGACTTTTCGTTTCAG
EV536481       --> TTTTTCATCCAGATGCTCCTATTGATAACAAGATTGACTTTTCGTTTCAG
FD978976       --> TTTTTCATCCAGATGCTCCTATTGATAACAAGATTGACTTTTCGTTTCAG
FD981126       --> TTTTTCATCCAGATGCTCCTATTGATAACAAGATTGACTTTTCGTTTCAG
EV552418       --> TTTTTCATCCAGATGCTCCTATTGATAACAAGATTGACTTTTCGTTTCAG
EY923606       --> TTTTTCATCCAGATGCTCCTATTGATAACAAGATTGACTTTTCGTTTCAG
EV538058       --> TTTTTCATCCAGATGCTCCTATTGATAACAAGATTGACTTTTCGTTTCAG
EV552318       --> TTTTTCATCCAGATGCTCCTATTGATAACAAGATTGACTTTTCGTTTCAG
EY916860       --> TTTTTCATCCAGATGCTCCTATTGATAACAAGATTGACTTTTCGTTTCAG
EW733025       --> TTTTTCATCCAGATGCTCCTATTGATAACAAGATTGACTTTTCGTTTCAG

               651    -    701
UN22095        --> CTGTATGATCTTAAGCAGCAAGGTTTCATCGAGAGGCAGGAGGTGAAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737470       <-- CTGTATGATCTTAAGCAGCAAGGTTTCATCGAGAGGCAGGAGGTGAAGCA
EY919386       <-- CTGTATGATCTTAAACAGCAAGGTTTCATCGAGAGGCAGGAGGTGAAGCA
EV547252       <-- CTGTATGATCTTAAGCAGCAAGGTTTCATCGAGAGGCAGGAGGTGAAGCA
EV547341       <-- CTGTATGATCTTAAGCAGCAAGGTTTCATCGAGAGGCAGGAGGTGAAGCA
EX893628       <-- CTGTATGATCTTAAGCAGCAAGGTTTCATCGAGGGGCAGGAGGTGAAGCA
FD975120       <-- CTGTATGATCTTAAGCAGCAAGGTTTCATCGAGAGGCAGGAGGTGAAGCA
EV542038       <-- CTGTATGATCTTAAGCAGCAAGGCTTCATCGAGAGGCAGGAGGTGAAGCA
EV542153       <-- CTGTATGATCTTAAGCAGCAAGGTTTCATCGAGAGGCAGGAGGTGAAGCA
EX759003       <-- CTGTATGATCTTAAGCAGCAAGGTTTCATCGAGAGGCAGGAGGTGAAGCA
EX775667       <-- CTGTATGATCTTAAGCAGCAAGGTTTCATCGAGAGGCAGGAGGTGAAGCA
EY925857       <-- CTGTATGATCTTAAGCAGCAAGGTTTCATCGAGAGGCAGGAGGTGAAGCA
FD976907       <-- CTGTATGATCTTAAGCAGCAAGGTTTCATCGAGAGGCAGGAGGTGAAGCA
EV536481       --> CTGTATGATCTTAAGCAGCAAGGTTTCATCGAGAGGCAGGAGGTGAAGCA
FD978976       --> CTGTATGATCTTAAGCAGCAAGGTTTCATCGAGAGGCAGGAGGTGAAGCA
FD981126       --> CTGTATGATCTTAAGC..................................
EV552418       --> CTGTATGATCTTAAGCAGCAAGGTTTCATCGAGAGGCAGGAGGTGAAGCA
EY923606       --> CTGTATGATCTTAAACAGCAAGGTTTCATCGAGAG...............
EV538058       --> CTGTATGATCTTAAGCAGCAAGGTTTCATCGAGAGGCAGGAGGTGA....
EV552318       --> CTGTATGATCTTAAGCAGCAAGGTTTCATCGAGAGGCAGGAGGTGAAGCA
EY916860       --> CTGTATGATCTTAAGCAGCAAGGTTTCATCGAGAG...............
EW733025       --> CTGTATGATCTTAAGCAGCAAAGTTTCATCGAGAGGCAGagtga......

               701    -    751
UN22095        --> AATGGTGGTGGCTACTCTTGCTGAGTCAGGCATGAACCTATCAGACGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737470       <-- AATGGTGGTGGCTACACTTGCTGAGTCAGGCATGAACCTATCAGACGAAG  Raphanus sativus cv Rat-Tail Radish #3870
EY919386       <-- AATGGTGGTGGCTACTCTTGCTGAGTCAGGCATGAACCTATCAGACGAAG  Raphanus raphanistrum subsp. landra
EV547252       <-- AATGGTGGTGGCTACTCTTGCTGAGTCAGGCATGAACCTATCAGACGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV547341       <-- AATGGTGGTGGCTACTCTTGCTGAGTCAGGCATGAACCTATCAGACGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893628       <-- AATGGTGGTGGCTACACTTGCTGAGTCAGGCATGAACCTATCAGACGAAG  Raphanus sativus var. oleiformis
FD975120       <-- AATGGTGGTGGCTACTCTTGCTGAGTCAGGCATGAACCTATCAGACGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542038       <-- AATGGTGGTGGCTACTCTTGCTGAGTCAGGCATGAACCTATCAGACGAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542153       <-- AATGGTGGTGGCTACTCTTGCTGAGTCAGGCATGAACCTATCAGACGAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759003       <-- AATGGTGGTGGCTACTCTTGCTGAGTCAGGCATGAACCTATCAGACGAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX775667       <-- AATGGTGGTGGCTACACTTGCTGAGTCAGGCATGAACCTATCAGACGAAG  Raphanus raphanistrum subsp. landra
EY925857       <-- AATGGTGGTGGCTACACTTGCTGAGTCAGGCATGAACCTATCAGACGAAG  Raphanus sativus var. oleiformis
FD976907       <-- AATGGTGGTGGCTACTCTTGCTGAGTCAGGCATGAACCTATCAGACGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536481       --> AATGGTGGTGGCTACACTTGCTGAGTCAGGCATGAACCTGTCAGACGAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978976       --> AATGGTGGTGGCTACTCTTGCTGAGTCAG-CATGAACCTATCAGACG...  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981126       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV552418       --> AATGGTGGTGGCTACTCTTGCTGAGTCAGGCATGAACCTATCAGACGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923606       --> ..................................................  Raphanus raphanistrum subsp. landra
EV538058       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552318       --> AATGGTGGTGGCTACTCTTGCTGAGTCAGGCATGAACCTATCAGACGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916860       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW733025       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               751    -    801
UN22095        --> TCATAGAGAGTATAATCGACAAGACATTTGAGGAAGCTGATACAAAACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737470       <-- TCATAGAGAGTATAATCGACAAGACATTTGAGGAAGCTGATACAAAACAT
EY919386       <-- TCATAGAGAGTATAATCGACAAGACATTTGAGGAAGCTGATACAAAACAT
EV547252       <-- TCATAGAGAGTATAATCGACAAGACATTTGAGGAAGCTGATACAAAACAT
EV547341       <-- TCATAGAGAGTGTAATCGACAAGACGTTTGAGGAAGCTGATACAAAACAT
EX893628       <-- TCATAGAGAGTATAATCGACAAGACATTTGAGGAAGCTGATACAAAACAT
FD975120       <-- TCATAGAGAGTATAATCGACAAGACATTTGAGGAAGCTGATACAAAACAT
EV542038       <-- TCATAGAGAGTATAATCGACAAGACATTTGAGGAAGCTGATACAAAACAT
EV542153       <-- TCATAGAGAGTATAATCGACAAGACATTTGAGGAAGCTGATACAAAACAT
EX759003       <-- TCATAGAGAGTATAATCGACAAGACATTTGAGGAAGCTGATACAAAACAT
EX775667       <-- TCATAGAGAGTATAATCGACAAGACATTTGAGGAAGCTGATACAAAACAT
EY925857       <-- TCATAGAGAGTATAATCGACAAGACATTTGAGGAAGCTGATACAAAACAT
FD976907       <-- TCATAGAGAGTATAATCGACAAGACATTTGAGGAAGCTGATACAAAACAT
EV536481       --> TCATAGAGAGTATAATCGACAAGACATTTGAGGAAGCTGATACAAA-CAT
FD978976       --> ..................................................
FD981126       --> ..................................................
EV552418       --> TCATAGAGAGTGTAATCGACAAGACGTTTGAGGAAGCTGATACAAAACAT
EY923606       --> ..................................................
EV538058       --> ..................................................
EV552318       --> TCATAGAGAGTATAATCGACAAGACATTTGAGGAAGCTGATACAAAACAT
EY916860       --> ..................................................
EW733025       --> ..................................................

               801    -    851
UN22095        --> GACGGGAGGATCGATAGGGAAGAGTGGAGGATCCTTGTTTTTAGGCATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737470       <-- GACGGGAGGATCGATAGGGAAGAGTGGAGGATCCTTGTTCTTAGGCATCC  Raphanus sativus cv Rat-Tail Radish #3870
EY919386       <-- GACGGGAGGATCGATAGGGAAGAGTGGAGGATCCTTGTTTTTAGGCATCC  Raphanus raphanistrum subsp. landra
EV547252       <-- GACGGGAGGATCGATAGGGAAGAGTGGAGGATCCTTGTTTTTAGGCACCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV547341       <-- GACGGGAGGATCGATAGGGAAGAGTGGAGGATCCTTGTTCTTAGGCACCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893628       <-- GACGGGAGGATCGATAGGGAAGAGTGGAGGATCCTTGTTTTTAGGCATCC  Raphanus sativus var. oleiformis
FD975120       <-- GACGGGAGGATCGATAGGGAAGAGTGGAGGATCCTTGTTTTTAGGCACCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542038       <-- GGCGGGAGGATCGATAGGGATGAGTGGAGGATCCTTGTTCTTAGGCATCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542153       <-- GACGGGAGGATCGATAGGGATGAGTGGAGGATCCTTGTTCTTAGGCATCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759003       <-- GACGGGAGGATCGATAGGGAAGAGTGGAGGATCCTTGTTTTTAGGCATCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX775667       <-- GACGGGAGGATCGATAGGGAAGAGTGGAGGATCCTTGTTTTTAGGCATCC  Raphanus raphanistrum subsp. landra
EY925857       <-- GACGGGAGGATCGATAGGGAAGAGTGGAGGATCCTTGTTTTTAGGCATCC  Raphanus sativus var. oleiformis
FD976907       <-- GACGGGAGGATCGATAGGGAAGAGTGGAGGATCCTTGTTCTTAGGCACCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536481       --> GATGGGAGGATCG.....................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978976       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981126       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV552418       --> GACGGGAGGATCGAT...................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923606       --> ..................................................  Raphanus raphanistrum subsp. landra
EV538058       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552318       --> GACGGGAGGATCGATAGGGAAGAGTGGAGGATCCTTGTTCTTAG-CACCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916860       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW733025       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               851    -    901
UN22095        --> TTCGCTTCTGAAAAACATGACTCTTCAGTATCTCAAGGATATCACGACTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737470       <-- TTCGCTTCTGAAAAACATGACTCTTCAGTATCTCAAGGATATCACAACTA
EY919386       <-- TTCGCTTTTGAAAAACATGACTCTTCAGTATCTCAAGGATATCACGACTA
EV547252       <-- TTCGCTTTTGAAAAACATGACTCTTCAGTATCTCAAGGATATCACGACTA
EV547341       <-- TTCGCTTCTGAAAAACATGACTCTTCAGTATCTCAAGGATATCACGACTA
EX893628       <-- TTCGCTTCTGAAAAACATGACTCTTCAGTATCTCAAGGATATCACAGCTA
FD975120       <-- TTCGCTTTTGAAAAACATGACTCTTCAGTATCTCAAGGATATCACGACTA
EV542038       <-- TTCCCTTCTGAAAAACATGACTCTTCAGTATCCCAAGGATATCACGACTA
EV542153       <-- TTCCCTTCTGAAAAACATGACTCTTCAGTATCTCAAGGATATCACGACTA
EX759003       <-- TTCCCTTTTGAAAAACATGACTCTTCAGTATCTCAAGGATATCACGACTA
EX775667       <-- TTCGCTTTTGAAAAACATGACTCTTCAGTATCTCAAGGATATCACTACTA
EY925857       <-- TTCGCTTTTGAAAAACATGACTCTTCAGTATCTCAAGGATATCACAACTA
FD976907       <-- TTCGCTTCTGAAAAACATGACTCTTCAGTATCTCAAGGATATCACGACTA
EV536481       --> ..................................................
FD978976       --> ..................................................
FD981126       --> ..................................................
EV552418       --> ..................................................
EY923606       --> ..................................................
EV538058       --> ..................................................
EV552318       --> TTCGCTTCTGAAAAACATGACTCTTCAGTATCTCAAG-ATATCACGACTA
EY916860       --> ..................................................
EW733025       --> ..................................................

               901    -    951
UN22095        --> CGTTTCCGAGCTTTGTGTTTCATTCACAGGTGGAAGATACCTGAGAAAA-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737470       <-- CGTTTCCGAGCTTTGTGTTTCATTTACAGGTGGAAGATACCTGAGAAAA-
EY919386       <-- CGTTTCCGAGCTTTGTGTTTCATTCACAGGTGGAAGATACCTGAGAAAA-
EV547252       <-- CGTTTCCGAGCTTTGTGTTTCATTCACAGGTGGAAGATACCTGAGAAAA-
EV547341       <-- CGTTTCCGAGCTTTGTGTTTCATTCACAGGTGGAAGATACCTGAGAAAA-
EX893628       <-- CGTTTCCGAGCTTTGTGTTTCATTCACAGGTGGAAGATACCTGAGAAAA-
FD975120       <-- CGTTTCCGAGCTTTGTGTTTCATTCACAGGTGGAAGATACCTGAGAAAA-
EV542038       <-- CGTTTCCGAGCTTTGTGTTTCATTCACAGGTGGAAGATACCTGAGAAAAA
EV542153       <-- CGTTTCCGAGCTTTGTGTTTCATTCACAGGTGGAAGATACCTGAGAAAAA
EX759003       <-- CGTTTCCGAGCTTTGTGTTTCATTCACAGGTGGAAGATACCTGAGAAAA-
EX775667       <-- CGTTTCCGAGCTTTGTGTTTCATTCGCAGGTGGAAGATACCTGAGAAAA-
EY925857       <-- CGTTTCCGAGCTTTGTGTTTCATTCACAGGTGGAAGATACCTGAGAAAA-
FD976907       <-- CGTTTCCGAGCTTTGTGTTTCATTCACAGGTGGAAGATACCTGAGAAAA-
EV536481       --> ..................................................
FD978976       --> ..................................................
FD981126       --> ..................................................
EV552418       --> ..................................................
EY923606       --> ..................................................
EV538058       --> ..................................................
EV552318       --> ..................................................
EY916860       --> ..................................................
EW733025       --> ..................................................

               951    -   1001
UN22095        --> --GCATTTACTAGAGCATCAGACAACTTTGGCAGTTGTGT-TTTGTGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737470       <-- --GCATTTACTAGAGCATCAGACAACTTTGGCAGTTGTGT-TTTGTGTGT  Raphanus sativus cv Rat-Tail Radish #3870
EY919386       <-- --GCATTTTCTAGAGTCAGAGACAACTT-GGCAGTTGTGT-TTTGAGTGT  Raphanus raphanistrum subsp. landra
EV547252       <-- --GCATTTACTAGAGCATCAGACAACTT-GGCAGTTGTGT-TTTGTGTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV547341       <-- --GCATTTACTAGAGCATCAGACAACTT-GGCAGTTGTGT-TTTGTGTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893628       <-- --GCATTTACTAGAGCATCAGACAACTTTGGCAGTTGTGT-TTTGTGTGT  Raphanus sativus var. oleiformis
FD975120       <-- --GCATTTACTAGAGCATCAGACAACTT-GGCAGTTGTGT-TTTGTGTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542038       <-- AAGCATTTACTAGAGCATCAGACAACTTTGGCAGTTGTGTGTTTGTGTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542153       <-- AAGCATTTACTAGAGCATCAGACAACTTTGGCAGTTGTGTGTTTGTGTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759003       <-- --GCATTTTCTAGA--GTCAGACAACTTTGGCAGTTGTGT-TTTGTGTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX775667       <-- --GCATTT-CTAGA--GTCAGACAACTTTGGCAGTTGTGT-TTTGTGTGT  Raphanus raphanistrum subsp. landra
EY925857       <-- --GCATTTACTAGAGCATCAGACAACTTTGGCAGTTGTGT-TTTGTGTGT  Raphanus sativus var. oleiformis
FD976907       <-- --GCATTTACTAGAGCATCAGACAACTT-GGCAGTTGTGT-TTTGTGTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536481       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978976       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981126       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV552418       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923606       --> ..................................................  Raphanus raphanistrum subsp. landra
EV538058       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552318       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916860       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW733025       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               1001   -   1051
UN22095        --> TTCTGAGTGTATCATGTTTATTTTGTTTCAGTCTGAAA-TCCAGTT--CC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737470       <-- TTCTGAGTGTATCCTGTTTATTTTGTTTCAGTCTGAAA-TCCAGTT-TCC  Raphanus sativus cv Rat-Tail Radish #3870
EY919386       <-- TTCTGAGTGTATCCTGTTTATTTTGTTTCAGTCTGAAA-TCCAGTT--CC  Raphanus raphanistrum subsp. landra
EV547252       <-- TTCTGAGTGTATCATGTTTATTTTGTTTCAGTCTGAAAATCCAGTT--CC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV547341       <-- TTCTGAGTGTATCATGTTTATTTTGTTTCAGTCTGAAAATCCAGTT--CC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893628       <-- TTCTGAGTGTATCATGTTTATTTTGTTTCAGTCTGAAA-TCCAGTT-TCC  Raphanus sativus var. oleiformis
FD975120       <-- TTCTGAGTGTATCATGTTTATTTTGTTTCAGTCTGAAAATCCAGTT--CC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542038       <-- TTCTGAGTGTATCATGTTTATTTTGTTTCAGTCTGAAA-TCCAGTT--CC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542153       <-- TTCTGAGTGTATCATGTTTATTTTGTTTCAGTCTGAAA-TCCAGTT--CC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759003       <-- TTCTGAGTGTATCCTGTTTATTTTGTTTCAGTCTGAAA-TCCAGTT--CC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX775667       <-- TTCTGAGTGTATCCTGTTTATTTTGTTTCAGTCTGAAA-TCCAGTTTCCC  Raphanus raphanistrum subsp. landra
EY925857       <-- TTCTGAGTGTATCATGTTTATTTTGTTTCAGTCTGAAA-TCCAGTT-TCC  Raphanus sativus var. oleiformis
FD976907       <-- TTCTGAGTGTATCATGTTTATTTTGTTTCAGTCTGAAAATCTAGTT--CC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536481       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978976       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981126       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV552418       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923606       --> ..................................................  Raphanus raphanistrum subsp. landra
EV538058       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552318       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916860       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW733025       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               1051   -   1101
UN22095        --> AAGAGTTTGTTGTTTCTTCTCTGAAAAACAGAAAGAGAAAACTTTCAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737470       <-- AAGAGTTTGTTGTTTCTTCTCTGAAAAACAGAAAGAGAAAACTTTCAAGT
EY919386       <-- AAGAGTTTGTTGTTTCTTCTCTGAAAAACAGAAAGAGAAACCTTTCAAGT
EV547252       <-- AAGAGTTTGTTGTTTTTTCTTTGAAAAACAGAAAGAGAAAACTTTCAAGT
EV547341       <-- AAGAGTTTGTTGTTTCTTTTCTGAAAAACAGAAAGAGAAAACTTTCAAGT
EX893628       <-- AAGAGTTTGTTGTTTCTTCTCTGAAAAACAGAAAGAGAAAACTTTCAAGT
FD975120       <-- AAGAGTTTGTTGTTTCTTCTCTGAAAAACAGAAAGAGAAAACTTTCAAGT
EV542038       <-- AAGAGTTTGTTGTTTCTTCTCTGAAAAACAGAAAGAGAAAACTTTCAAGT
EV542153       <-- AAGAGTTTGTTGTTTCTTCTCTGAAAAACAGAAAGAGAAAACTTTCAAGT
EX759003       <-- AAGAGTTTGTTGTTTCTTTTCTGAAAAACAGAAAGAGAAAACTTTCTAGT
EX775667       <-- AAGAGTTTGTTGTTTCTTCTCTGAAAAACAGAAAGAGAAAACTTTCAAGT
EY925857       <-- AAGAGTTTGTTGTTTCTTCTCTGAAAAACAGAAAGAGAAAACTTTCAAGT
FD976907       <-- AAGAGTTTGTTGTTTCTTTTCTGAAAAACAGAAAGAGAAAACTTTCAAGT
EV536481       --> ..................................................
FD978976       --> ..................................................
FD981126       --> ..................................................
EV552418       --> ..................................................
EY923606       --> ..................................................
EV538058       --> ..................................................
EV552318       --> ..................................................
EY916860       --> ..................................................
EW733025       --> ..................................................

               1101   -   1151
UN22095        --> TGTATTCT--TTTTTTT-TT-CTGTATCCTGCTGGTTTTGTTTATATTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737470       <-- TGTATTCT--TTTTTTTCTT-CTGTATCCTGCTGGTTTTGTTTATATTTT
EY919386       <-- TGTATTCT--TTTTTTT-T--CTGTATCCTGCTGGTTTTGTTTATATTTT
EV547252       <-- TGTATTCT--TTTTTTT-TTTCTGTATCCTGCTGGTTTTGTTTATATTTT
EV547341       <-- TGTATTCT--TTT.....................................
EX893628       <-- TGTATTCT--TTTTTTT-TT-CTGTATCCTGCTGGTTTTGTTTATATTTT
FD975120       <-- TGTATTCT--TTTTTTT-TT-CTGT.........................
EV542038       <-- TGTATTCT--TTTTTTT-T--CTGTATCCTGCTGGCTTTGTTTATATTCT
EV542153       <-- TGTATTCT--TTTTTTT-T--CTGTATCCTGCTGGCTTTGTTTATATTCT
EX759003       <-- TGTATTCTCTTTTTTTT-TT-CTGTATCCTGCTGGTTTTG..........
EX775667       <-- TGTATTCT--TTTTTTT-CT-CTGTATCCTGCTGGTTTTGTTTATATATT
EY925857       <-- TGTATTCT--TTTTTTT-T--CTGTATCCTGCTGGTTTTGTTTATATTTT
FD976907       <-- TGTATTCT--TTTTTTT-TTTCTGTATCCTGCTGGTTTTGTTTATATTTT
EV536481       --> ..................................................
FD978976       --> ..................................................
FD981126       --> ..................................................
EV552418       --> ..................................................
EY923606       --> ..................................................
EV538058       --> ..................................................
EV552318       --> ..................................................
EY916860       --> ..................................................
EW733025       --> ..................................................

               1151   -   1201
UN22095        --> CTATATGA-TTTACTGGTA-GTCTTTTTAGAGTTAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737470       <-- CTATATGA-TTTACTGGTAAGTCTTTTTAGAGTTAAC
EY919386       <-- CTg..................................
EV547252       <-- CTATATGA-TTTACTGGTA-GTCg.............
EV547341       <-- .....................................
EX893628       <-- CTATATG..............................
FD975120       <-- .....................................
EV542038       <-- CTATATGAATTTACTGGTA-GTCTTTTTAGAGT....
EV542153       <-- CTATATGAATTTACTGGTA-GTCTTTTTAGAGTTAAC
EX759003       <-- .....................................
EX775667       <-- CTATATGA-TT..........................
EY925857       <-- CTATATGA-TTTACTGGTA-GTCTTTTTAGAGTTA..
FD976907       <-- CTATATGA-TTTACTGGTA-GTCTCTTTAGAGTc...
EV536481       --> .....................................
FD978976       --> .....................................
FD981126       --> .....................................
EV552418       --> .....................................
EY923606       --> .....................................
EV538058       --> .....................................
EV552318       --> .....................................
EY916860       --> .....................................
EW733025       --> .....................................