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Alignment for radish unigene UN22109

               1      -     51
UN22109        --> AGGGCTGATGGTGGATACCAAATTTATGAGATGTGCTCAACATTCGTCA-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565502       <-- ..................................................
FD957663       <-- ..................................................
FD941631       <-- ..................................................
FD571448       <-- ..................................................
FD939658       <-- ..................................................
EV565501       <-- ..................................................
FD530458       --> AGGGCTGATGGTGGACACCAAATTTATGAGATGTGCTCAACATTCGTCA-
EV570802       --> .........GGTGGATACCAAATTTATGAGATGTGCTCAACATTCGTCAA
FD575279       --> ................................GTGCTCAACATTCGTCA-
FD935726       --> .................................cGCTCAACATTCGTCA-
EV570801       --> .......................................ACATTCGTCAA
FD937231       --> ..................................................

               51     -    101
UN22109        --> -TATCAACCAACCAAGTTACAATTATTATATAGTGAACAACATCTATGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565502       <-- ..................................................
FD957663       <-- ..................................................
FD941631       <-- ..................................................
FD571448       <-- ..................................................
FD939658       <-- ..................................................
EV565501       <-- ..................................................
FD530458       --> -TATCAACCAACCAAGTTACAATTATTATATAGTGAACAACATCTATGGA
EV570802       --> ATATCAACCAACCAAGTTACAATTATTATATAGTGAACAACATCTATGGA
FD575279       --> -TATCAACCAACCAAGTTACAATTATTATATAGTGAACAACATCTATGGA
FD935726       --> -TATCAACCAACCAAGTTACAATTATTATATAGTGAACAACATCTATGGA
EV570801       --> ATATCAACCAACCAAGTTACAATTATTATATAGTGAACAACATCTATGGA
FD937231       --> ....ccACCAACCAAGTTACAATTATTATATAGTGAACAACATCTATGGA

               101    -    151
UN22109        --> GGACACAACATCTACTTTCCTTGTTGGTTTGGTAACAATGAAGATACAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565502       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD957663       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD941631       <-- ..................................................  Raphanus sativus var. oleiformis
FD571448       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD939658       <-- ..................................................  Raphanus sativus var. oleiformis
EV565501       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD530458       --> GGACACAACATCTACTTTCCTTGTTGGTTTGGTAACAATGAAGATACAAG  Raphanus raphanistrum subsp. maritimus
EV570802       --> GGACACAACATCTACTTTCATTGTTGGTTTGGTAACAATGAAGATACAAG  Raphanus raphanistrum subsp. landra
FD575279       --> GGACACAACATCTACTTTCCTTGTTGGTTTGGTAACAATGAAAATACAAG  Raphanus sativus cv Early Scarlet Globe
FD935726       --> GGACACAACATCTACTTTCCTTGTTGGTTTGGTAACAATGAAGATACAAG  Raphanus sativus var. oleiformis
EV570801       --> GGACACAACATCTACTTTCATTGTTGGTTTGGTAACAATGAAGATACAAG  Raphanus raphanistrum subsp. landra
FD937231       --> GGACACAACATCTACTTTCCTTGTTGGTTTGGTAACAATGAAGATACAAG  Raphanus sativus var. oleiformis

               151    -    201
UN22109        --> TTAATACGCAATTTCTTCAAGAACTTGGAGAGTTTTCTCGTGTACCCATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565502       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD957663       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD941631       <-- ..................................................  Raphanus sativus var. oleiformis
FD571448       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD939658       <-- ..................................................  Raphanus sativus var. oleiformis
EV565501       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD530458       --> CTAATACGCAATTTCTTCAAGAACTTGGAGAGTTTTCTCGTGTACCCATT  Raphanus raphanistrum subsp. maritimus
EV570802       --> CTAATACGCAATTTCTTCAAGAACTTGGAGAGTTTTCTCGTGTACCCATT  Raphanus raphanistrum subsp. landra
FD575279       --> TTAATACGCAATTTCTTCAAGAACTTGGAGAGTTTTCTCGTGTACCCATT  Raphanus sativus cv Early Scarlet Globe
FD935726       --> TTAATACGCAATTTCTTCAAGAACTTGGAGAGTTTTCTCGTGTACCCATT  Raphanus sativus var. oleiformis
EV570801       --> CTAATACGCAATTTCTTCAAGAACTTGGAGAGTTTTCTCGTGTACCCATT  Raphanus raphanistrum subsp. landra
FD937231       --> TTAATACGCAATTTCTTCAAGAACTTGGAGAGTTTTCTCGTGTACCCATT  Raphanus sativus var. oleiformis

               201    -    251
UN22109        --> CTAGATGTTGTGCCGTGATACCGGATGAATTACCCGAGTATATGCTTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565502       <-- ..................................................
FD957663       <-- ..................................................
FD941631       <-- ..................................................
FD571448       <-- ..................................................
FD939658       <-- ..................................................
EV565501       <-- ..................................................
FD530458       --> CTAGATGTTGTGCCGTGATACCGGATGAATTACCCAAGTATATGCTTCCC
EV570802       --> CTAGATGTTGTGCCGTGATACCGGATGAATTACCCGAGTATATGCTTCCC
FD575279       --> CTAGATGTTGTGCCGTGATACCGGATGAATTACCCGAGTATATGCTTCCC
FD935726       --> CTAGATGTTGTGCCGTGATACCGGATGAATTACCCGAGTATATGCTTCCC
EV570801       --> CTAGATGTTGTGCCGTGATACCGGATGAATTACCCGAGTATATGCTTCCC
FD937231       --> CTAGATGTTGTGCCTTGATACCGGATGAATTACCCGAGTATATGCTTCCC

               251    -    301
UN22109        --> ATTACCTTTGTGACAGTCTCTAGAAACATTCCTGGCCTTACTGGTAATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565502       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD957663       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD941631       <-- ..................................................  Raphanus sativus var. oleiformis
FD571448       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD939658       <-- ..................................................  Raphanus sativus var. oleiformis
EV565501       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD530458       --> ATTACCTTTGTGACAGTCTCTAGAAACATTCCTGGCCTTACTGGTAATGG  Raphanus raphanistrum subsp. maritimus
EV570802       --> ATTACCTTTGTGACAGTCTCTAGAAACATTCCTGGCCTTACTGGTAATGG  Raphanus raphanistrum subsp. landra
FD575279       --> ATTACCTTTGTGACAGTCTCTAAAAACATTCCTGGCCTTACAGGTAATGG  Raphanus sativus cv Early Scarlet Globe
FD935726       --> ATTACCTTTGTGACAGTCTCTAGAAACATTCCTGGCCTTACAGGTAATGG  Raphanus sativus var. oleiformis
EV570801       --> ATTACCTTTGTGACAGTCTCTAGAAACATTCCTGGCCTTACTGGTAATGG  Raphanus raphanistrum subsp. landra
FD937231       --> ATTACCTTTGTGACAGTCTCTAGAAACATTCCTGGCCTTACAGGTAATGG  Raphanus sativus var. oleiformis

               301    -    351
UN22109        --> TTTTTT-CCCTGTAAAGCTTCCCCTTCCGTTTAATCCACTTTGTCTTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565502       <-- ..................................................
FD957663       <-- ..................................................
FD941631       <-- ..................................................
FD571448       <-- ..................................................
FD939658       <-- ..................................................
EV565501       <-- ..................................................
FD530458       --> TTTTTTTCCCTGTAAAGCTTCCCCTTCCGTTTAATCCACTTTGTCTTCTT
EV570802       --> TTTTTT-CCCTGTAAAGCTTCCCCTTCCGTTTAATCCACTTTGTCTTCTT
FD575279       --> TTTTTT-CCCTGTAAAGCTTCCCCTTCCGTTTAATCCACTTTGTCTTCTT
FD935726       --> TTTTTT-CCCTGTAAAGCTTCCCCTTCCGTTTAATCCACTTTGTCTTCTT
EV570801       --> TTTTTT-CCCTGTAAAGCTTCCCCTTCCGTTTAATCCACTTTGTCTTCTT
FD937231       --> TTTTTT-CCCTGTAAAGCTTCCCCTTCCGTTTAATCCACTTTGTCTTCTT

               351    -    401
UN22109        --> CCTTGGCCAGAACCATCCTCCTCATTGCTAAGATCATCTGCACCTTCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565502       <-- ..................................................
FD957663       <-- ..................................................
FD941631       <-- ..................................................
FD571448       <-- ..................................................
FD939658       <-- ..................................................
EV565501       <-- ..................................................
FD530458       --> CCTTGGCCAGAACCATCCTCCTCATTGCTAAGATCATCTGCACCTTCATC
EV570802       --> CCTTGGCCAGAACCATCCTCCCCATTGCTAAGATCATCTGCACCTTCATC
FD575279       --> CCTTGGCCAGAACCATCCTCCTCATTGCTAAAATCATCTGCACCTTCATC
FD935726       --> CCTTGGCCAGAACCATCCTCCTCATTGCTAAGATCATCTGCACCTTCATC
EV570801       --> CCTTGGCCAGAACCATCCTCCCCATTGCTAAAATCATCTGCACCTTCATC
FD937231       --> CCTTGGCCAGAACCATCCTCCTCATTGCTAAAATCATCTGCACCTTCATC

               401    -    451
UN22109        --> TTTCCCTTGCATGACATTCTTGATCATTTGCTGCACTGTCTTTCCAGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565502       <-- ..................................................
FD957663       <-- ..................................................
FD941631       <-- ..................................................
FD571448       <-- ..................................................
FD939658       <-- ..................................................
EV565501       <-- ..................................................
FD530458       --> TTTCCCTTGCATGACATTCTTGATCATTTGCTGCACTGTCTTTCCAGGTT
EV570802       --> TTTCCCTTGCATGACATTCTTGATCATTTGCTGCACTGTCTTTCCAGGTT
FD575279       --> TTTCCCTTGCATGACATTCTTGATCATTTGCTGCACTGTCTTTCCAGGTT
FD935726       --> TTTCCCTTGCATGACATTCTTGATCATTTGCTGCACTGTCTTTCCAGGTT
EV570801       --> TTTCCCTTGCATGACATTCTTGATCATTTGCTGCACTGTCTTTCCAGGTT
FD937231       --> TTTCCCTTGCATGACATTCTTGATCATTTGCTGCACTGTCTTTCCAGGTT

               451    -    501
UN22109        --> TCAGAGCTACCAATTTGGTTAAGAAATTCACCTCTGATTCAGGCAGAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565502       <-- ..................................................
FD957663       <-- ..................................................
FD941631       <-- ..................................................
FD571448       <-- ..................................................
FD939658       <-- ..................................................
EV565501       <-- ..................................................
FD530458       --> TCAGAGCTACCAATTTGGTTAAGAAATTCACCTCTGATTCAGGCAGAGTG
EV570802       --> TCAGAGCTACCAATTTGGTTAAGAAATTCACCGCTGATTCAGGCAGAGTG
FD575279       --> TCAGAACTACCAATTTGGTTAAGAAATTCACCTCTGATTCAGG.......
FD935726       --> TCAAAGCTACCAATTTGGTTAAGAAATTCACCTCTGATTCAGGCAGAGTG
EV570801       --> TCAGAGCTACCAATTTGGTTAAGAAATTCACCGCTGATTCAGGCAGAGTG
FD937231       --> TCAAAGCTACCAATTTGGTTAAAAAATTCACCTCTGATTCAGGCAGAGTG

               501    -    551
UN22109        --> GAGAAACCACGGTCATTTCTCTCATCAAGTATACCACCTCCCATCATGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565502       <-- ..................................................
FD957663       <-- ..................................................
FD941631       <-- ..................................................
FD571448       <-- ..................................................
FD939658       <-- ..................................................
EV565501       <-- ..................................................
FD530458       --> GAGAAACCACGGTCATTTCTCTCATCAAGTATACCACCTCCCATCATGTT
EV570802       --> GAGAAACCACGGTCATTTCTCTCATCAAGTATACCTCCTCCCATCATGTT
FD575279       --> ..................................................
FD935726       --> GAGAAACCACGGTCATTTCTCTCATCAAGTATACCACCTCCCATCATGTT
EV570801       --> GAAAAACCACGGTCATTTCTCTCATCAAGTATACCTCCTCCCATCATGTT
FD937231       --> GAGAAACCACGGTCATTTCTCTCATCAAGTATACCACCTCCCATCATGTT

               551    -    601
UN22109        --> CCTCGCTTCCTCTCTGATCAAAACAAGCCTCGCTAGTAGTTTCCTATCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565502       <-- ..................................AGTAGTTTCCTATCAG
FD957663       <-- ..................................................
FD941631       <-- ..................................................
FD571448       <-- ..................................................
FD939658       <-- ..................................................
EV565501       <-- ..................................................
FD530458       --> CCTCGCTTCCTCTCTGATCAAAACAAGCCTCGCTAGTAGTTTCCTA....
EV570802       --> CCTCGCTTCCTCTCTGATTAAAACAAGCCTCGCTAGTAGTTTCCTATCAG
FD575279       --> ..................................................
FD935726       --> CCTCGCTTCCTCTCTGATCAAAACAAGCCTCGCTAGTAGTTTCCGATCAG
EV570801       --> CCTCGCTTCCTCTCTGATTAAAACAAGCCTCGCTAGTAGTTTCCTATCAG
FD937231       --> CCTCGCTTCCTCTCTGATCAAAACAAGCCTCGCTAGTAGTTTCCGATCAG

               601    -    651
UN22109        --> GAACAGCCGGCCTTGTCTCCATAGTCTCTAGCAAGTCATCAGCTTGATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565502       <-- GAACAGCCGGCCTTGTCTCCATAGTCTCTAGCAAGTCATCAGCTTGATTA
FD957663       <-- ..................................................
FD941631       <-- ..................................................
FD571448       <-- ..................................................
FD939658       <-- ..................................................
EV565501       <-- ..................................................
FD530458       --> ..................................................
EV570802       --> GAACAGCCGGCCTTGTCTCCATAGTCTCTAGCAAGTCATCAGCTTGATTA
FD575279       --> ..................................................
FD935726       --> GAACAGCCGGCCTTGTCTCCATAGTCTCTAGCAAATCATCAGCTTGATTA
EV570801       --> GAACAGCCGGCCTTGTCTCCATAGTCTCTAGCAAGTCATCAGCTTGATTA
FD937231       --> GAACAGCCGGCCTTGTCTCCATAGTCTCTAGCAAATCATCAGCTTGATTA

               651    -    701
UN22109        --> GCTATGTCATTCAGATTAGCTCCGGGTAAATGAAGCTTAGTACCGTCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565502       <-- GCTATGTCATTCAGATTAGCTCCGGGTAAATGAAGCTTAGTACCGTCCTT
FD957663       <-- ..................................................
FD941631       <-- ..................................................
FD571448       <-- ..................................................
FD939658       <-- ..................................................
EV565501       <-- ..................................................
FD530458       --> ..................................................
EV570802       --> GCTATGTCATTCAGATTAGCTCCGGGTAAATGAAGCTTAGTACCGTCCTT
FD575279       --> ..................................................
FD935726       --> GCT...............................................
EV570801       --> GCTATGTCAT........................................
FD937231       --> GCTATGTCATTCAGATTAGCTCCGGGTAAATGAAGCTTAGTACCGTCCTT

               701    -    751
UN22109        --> GCCTTCAAAAGCCCCACCACCTGCAGCCACCCTACGCAGCAGCTCTTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565502       <-- GCCTTCAAAAGCCCCACCACCTGCAGCCACCCTACGCAGCAGCTCTTGTC
FD957663       <-- ...........................................TCTTGTC
FD941631       <-- ..................................................
FD571448       <-- ..................................................
FD939658       <-- ..................................................
EV565501       <-- ..................................................
FD530458       --> ..................................................
EV570802       --> GCCTTCAAAAGCCCCACCACCTGCAGCCACCCTACGCAGCAGCTCTTGTC
FD575279       --> ..................................................
FD935726       --> ..................................................
EV570801       --> ..................................................
FD937231       --> GCCTTCAAAAGCCCCACCACCTGCAGCCACCCTACGCAGCAGCTCTTGTC

               751    -    801
UN22109        --> TACTCTCTTTCTTAGGTGTTCTACAGAGTAGACCAATCACTTGTACATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565502       <-- TACTCTCTTTCTTAGGTGTTCTACAGAGTAGACCAATCACTTGCACATGA
FD957663       <-- TACTCTCTTTCTTAGGTGTTCTACAGAGTAGACCAATCACTTGTACGTGA
FD941631       <-- ..........tttttagtgTCTACAGAGTAGACCAATCACTTGTACATGA
FD571448       <-- ..................................................
FD939658       <-- ..................................................
EV565501       <-- ..................................................
FD530458       --> ..................................................
EV570802       --> TACTCTCTTTCTTAG-TGTTCTACAGAGTAGACCAATCACTTGCACA...
FD575279       --> ..................................................
FD935726       --> ..................................................
EV570801       --> ..................................................
FD937231       --> TACTCTCTTTTTTAGGTGTTCTACAGAGTAGACCAATCACTTGTACATGA

               801    -    851
UN22109        --> GGAGGACATTTTTTAGTGAGATGAGATAAGACAGTCTCCTTGACGACCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565502       <-- GGAGGACATTTTTTAGTGAGATGAGATAAGACAGTCTCCTTGACGACCTC
FD957663       <-- GGAGGACATTTTTTAGTGAGATGAGATAAGACAGTCTCCTTGACGACCTC
FD941631       <-- GGAGGACATTTTTTAGTGAGATGAGATAAGACAGTCTCCTTGACGACCTC
FD571448       <-- ..........................................ACGACCTC
FD939658       <-- ..................................................
EV565501       <-- ..................................................
FD530458       --> ..................................................
EV570802       --> ..................................................
FD575279       --> ..................................................
FD935726       --> ..................................................
EV570801       --> ..................................................
FD937231       --> GGAGGACATTTTTTAGTGAGATGAGATAAGACAGTCTCCTTGACGACCTC

               851    -    901
UN22109        --> TAACAAAGCCTTCCTTTTATCGTCTTGGTCTCTGTCAGCGAGTTGAATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565502       <-- TAACAAAGCCTTCCTCTTATCGTCTTGGTCTCTGTCAGCGAGTTGAATCA
FD957663       <-- TAACAAAGCCTTCCTTTTATCGTCTTGGTCTCTGTCAGCGAGTTGAATCA
FD941631       <-- TAACAAAGCCTTCCTTTTATCGTCTTGGTCTCTGTCAGCGAGTTGAATCA
FD571448       <-- TAACAAAGCCTTCCTTTTATCGTCTTGGTCTCTGTCAGCGAGTTGAATCA
FD939658       <-- ..................................TCAGCGAGTTGAATCA
EV565501       <-- ..................................................
FD530458       --> ..................................................
EV570802       --> ..................................................
FD575279       --> ..................................................
FD935726       --> ..................................................
EV570801       --> ..................................................
FD937231       --> TAACAAAGCCTTCCTTTTATCGTCTTGGTCTCTGTCAGCGA.........

               901    -    951
UN22109        --> TGTAATCAAGAGCCATCATAAACCCAGACTCCATTTCATCAACTCTTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565502       <-- TGTAATCAAGAGCCATCATAAACCCAGACTCCATCTCATCAACTCTTTTC
FD957663       <-- TGTAATCAAGAGCCATCATAAACCCAGACTCCATTTCATCAACTCTTTTC
FD941631       <-- TGTAATCAAGAGCCATCATGAACCCAGACTCCATTTCATCAACTCCTTTC
FD571448       <-- TGTAATCAAGAGCCATCATAAACCCAGACTCCATTTCATCAACTCTTTTC
FD939658       <-- TGTAATCAAGAGCCATCATGAACCCAGACTCCATTTCATCAACTCTTTTC
EV565501       <-- ..................................................
FD530458       --> ..................................................
EV570802       --> ..................................................
FD575279       --> ..................................................
FD935726       --> ..................................................
EV570801       --> ..................................................
FD937231       --> ..................................................

               951    -   1001
UN22109        --> CCTATAACTCCTTGCGCAGCCAATTCCACAGCAACGTTCTCAGATGCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565502       <-- CCTATAACTCCTTGCGCAGCCAATTCCACAGCAACGTTCTCAGATGCTTC
FD957663       <-- CCTATAACTCCTTGCGCAGCCAATTCCACAGCAACGTTCTCAGATGCTTC
FD941631       <-- CCTATAACTCCTTGCGCAGCCAATTCCACAGCAACGTTCTCAGATGCTTC
FD571448       <-- CCTATAACTCCT-GCGCAGCCAATTCCACAGCAACGTTCTCAGATGCTTC
FD939658       <-- CCTATAACTCCTTGCGCAGCCAATTCCACAGCAACGTTCTCAGATGCTTC
EV565501       <-- ..................................................
FD530458       --> ..................................................
EV570802       --> ..................................................
FD575279       --> ..................................................
FD935726       --> ..................................................
EV570801       --> ..................................................
FD937231       --> ..................................................

               1001   -   1051
UN22109        --> ATTCATCTTCATATCTTGCAGGAGGGTTATCATCTCTTCGAGAACTGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565502       <-- ATTCATCTTCATATCTTGCAGGAGGGTTATCATCTCTTCGAGAACTGAGG
FD957663       <-- ATTCATCTTCATATCTTGCAGGAGGGTTATCATCTCTTCGAGAACTGAGG
FD941631       <-- ATTCATCTTCATATCTTGCAGGAGGGTTATCATCTCTTCGAGAACTGAGG
FD571448       <-- ATTCATCTTCATATCTTGCAGGAGGGTTATCATCTCTTCGAGAACTGAGG
FD939658       <-- ATTCATCTTCATATCTTGCAGGAGGGTTATCATCTCTTCGAGAACTGAGG
EV565501       <-- .....................................TCGAGAACTGAGG
FD530458       --> ..................................................
EV570802       --> ..................................................
FD575279       --> ..................................................
FD935726       --> ..................................................
EV570801       --> ..................................................
FD937231       --> ..................................................

               1051   -   1101
UN22109        --> TTACTTGTTCGCCTCCTTTAAGCAACGCCTCGTACTCAGATGGGTCAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565502       <-- TTACTTGTTCGCCTCCTTTAAGCAACGCCTCGTACTCAGATGGGTCAAGC  Raphanus raphanistrum subsp. landra
FD957663       <-- TTACTTGTTCGCCTCCTTTAAGCAACGCCTCGTACTCAGATGGGTCAAGC  Raphanus sativus cv Rat-Tail Radish #3870
FD941631       <-- TTACTTGTTCGCCTCCTTTAAGCAACGCCTCGTACTCAGATGCGTCAAGC  Raphanus sativus var. oleiformis
FD571448       <-- TTACTTGTTCGCCTCCTTTAAGCAACGCCTCGTACTCAGATGCGTCAAGC  Raphanus sativus cv Early Scarlet Globe
FD939658       <-- TTACTTGTTCGCCTCCTTTAAGCAACGCCTCGTACTCAGATGCGTCAAGC  Raphanus sativus var. oleiformis
EV565501       <-- TTACTTGTTCGCCTCCTTTAAGCAACGCCTCGTACTCAGATGGGTCAAGC  Raphanus raphanistrum subsp. landra
FD530458       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV570802       --> ..................................................  Raphanus raphanistrum subsp. landra
FD575279       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD935726       --> ..................................................  Raphanus sativus var. oleiformis
EV570801       --> ..................................................  Raphanus raphanistrum subsp. landra
FD937231       --> ..................................................  Raphanus sativus var. oleiformis

               1101   -   1151
UN22109        --> TTGTCGTCGGCGTTGGTTTTACTCTGATGGGTTCCGTATCTTTCGAAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565502       <-- TTGTCGTCGACGTTGGTTTTACTCTGATGGGTTCCGTATCTTTCGAAGAG
FD957663       <-- TTGTCGTCGGCGTTGGTTTTACTCTGATGGGTTCCGTATCTTTCGAAAAG
FD941631       <-- TTGTCGTCGGCGTTGGTTTTACTCTGATGGGTTCCGTATCTTTCGAAAAG
FD571448       <-- TTGTCGTCGGCGTTGGTTTTACTCTGATGGGTTCCGTATCTTTCGAAAAG
FD939658       <-- TTGTCGTCGGCGTTGGTTTTGCTCTGATGGGTTCCGCATCTTTCGAAAAG
EV565501       <-- TTGTCGTCGACGTTGGTTTTACTCTGATGGGTTCCGTATCTTTCGAAGAG
FD530458       --> ..................................................
EV570802       --> ..................................................
FD575279       --> ..................................................
FD935726       --> ..................................................
EV570801       --> ..................................................
FD937231       --> ..................................................

               1151   -   1201
UN22109        --> CTCCTCGTCGGTGTATCCGCCTCCAACCTCGTAAGGGGCGCAGAATTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565502       <-- CTCCTCGTCGGTGTATCCGCCTCCGACCTCGTAAGGGGCGCAGAGTTGAA
FD957663       <-- CTCCTCGTCGGTGTATCCGCCTCCAACCTCGTAAGGGGCGCAGAATTGAA
FD941631       <-- CTCCTCGTCGGTGTATCCGCCTCCAACCTCGTAAGGGGCGCAGAATTGAA
FD571448       <-- CTCCTCGTCGGTGTATCCGCCTCCAACCTCGTAAGGGGCGCAGAATTGAA
FD939658       <-- CTCCTCGTCGGTGTATCCGCCTCCAACCTCGTAAGGGGCGCAGAATTGAA
EV565501       <-- CTCCTCGTCGGTGTATCCGCCTCCGACCTCGTAAGGGGCGCAGAGTTGAA
FD530458       --> ..................................................
EV570802       --> ..................................................
FD575279       --> ..................................................
FD935726       --> ..................................................
EV570801       --> ..................................................
FD937231       --> ..................................................

               1201   -   1251
UN22109        --> CTAGCCGCCGGTTCGGTTTCTGGGTTTTGTTTGGTCGGAACGAGCAAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565502       <-- CTAGCCGCCGGTTCGGTTTCTGGGTTTTGCTTGGTCGGAACGAGCAAAAG
FD957663       <-- CTAGCCGCCGGTTCGGTTTCTGGGTTTTATTTGGTCGGAACGAGCAAAAG
FD941631       <-- CTAGCCGCCGGTTCGGTTTCTGGGTTTTGTTTGGTCGGAACGAGCAAAAG
FD571448       <-- CTAGCCGCCGGTTCGGTTTCTGGGTTTTGTTTGGTCGGAACGAGCAAAAG
FD939658       <-- CTAGCCGCCGGTTCGGTTTCTGGGTTTTGTTTGGTCGGAACGAGCAAAAG
EV565501       <-- CTAGCCGCCGGTTCGGTTTCTGGGTTTTGCTTGGTCGGAACGAGCAAAAG
FD530458       --> ..................................................
EV570802       --> ..................................................
FD575279       --> ..................................................
FD935726       --> ..................................................
EV570801       --> ..................................................
FD937231       --> ..................................................

               1251   -   1301
UN22109        --> GAGAAAGGAAGTGAGGAGGTAATTGATGGAGTCAGAGACTCTCTTCTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565502       <-- GAGAAAGGAAGTGAGGAGGTAATCGATGGAGTCAGAGACTCTCTTCTCGA
FD957663       <-- GAGAAAGGAAGTGAGGAGGTAATTGATGGAGTCAGAGACTCTCTTCTTGG
FD941631       <-- GAGAAAGTAAGTGAAGAGGTAATTGATGGAGTCAGAGACTCTCTTCTTGG
FD571448       <-- GAGAAAGGAAGTGAGGAGGTAATTGATGGAGTCAGAGACTCTCTTCTTGG
FD939658       <-- GAGAAAGTAAGTGAAGAGGTAATTGATGGAGTCAGAGACTCTCTTCTTGG
EV565501       <-- GAGAAAGGA.........................................
FD530458       --> ..................................................
EV570802       --> ..................................................
FD575279       --> ..................................................
FD935726       --> ..................................................
EV570801       --> ..................................................
FD937231       --> ..................................................

               1301   -   1351
UN22109        --> AGGTGTCGGGGAGGAGTGAAAACGAAGGTGAAGAGATTGTAACATGCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565502       <-- AGGTGACGGGGAGGAGTGAAAGCGGAGGTGAAGAGATTGTAACATGATTT
FD957663       <-- AGGTGTCGGGGAGGAGTGAAAACGAAGGTGAAGAGATTGTAACATGCTTT
FD941631       <-- AGGTGTCGGGGAGGAGTGAAAACGAAGGTGAAGAGATTGTAACATGCTTT
FD571448       <-- AGGTGTCGGGGAGGAGTGAAAACGAAGGTGAAGAGATTGTAACATGCTTT
FD939658       <-- AGGTGTCGGGGAGGAGTGAAAACGAAGGTGAAGAGATTGTAACATGCTTT
EV565501       <-- ..................................................
FD530458       --> ..................................................
EV570802       --> ..................................................
FD575279       --> ..................................................
FD935726       --> ..................................................
EV570801       --> ..................................................
FD937231       --> ..................................................

               1351   -   1401
UN22109        --> GAGGTTCTGGGTTTAAGCAAGGGGAGAAGGAGATACGATGAAGTGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565502       <-- GAGGTTCTGGGTTTAAGCAAGGGGAGAAGGAGATATGATGAAGTc...
FD957663       <-- GAGGTTCTGGGTTTAAGCAAGGGGAGAAGGAGATACGATGAAGTGTCC
FD941631       <-- GAGGTTCTGGGTTTAAGCAAGGGGAGAAGGAGATACGATGAAGTGTCC
FD571448       <-- GAGGTTCTGGGTTTAAGCAAGGGGAGAAGGAGATACGATGAAGTGTCC
FD939658       <-- GGGGTTCTGGGTTTAAGCAAGGGGAGAAGGAGATACGATGAAGTGTCC
EV565501       <-- ................................................
FD530458       --> ................................................
EV570802       --> ................................................
FD575279       --> ................................................
FD935726       --> ................................................
EV570801       --> ................................................
FD937231       --> ................................................