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Alignment for radish unigene UN22117

               1      -     51
UN22117        --> GGGATCCATCAACATTCTTTCGAACAGCAACCGCCTCTCTCTCTCTGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD566580       <-- GGGATCCATCAACATTCTTTCGAACAGCAACCGCCTCTCTCTCTCTGTCT  Raphanus sativus var. oleiformis
EV532170       <-- ..gggCCATCAACATTCTTTCGAACAGCGACCGCCTCTCTCTCTCTCTCT  Raphanus raphanistrum subsp. maritimus
EY934331       <-- ......................AACAGCAACCGCCTCTCTCTCTCTGTCT  Raphanus sativus cv Early Scarlet Globe
EW718939       <-- ..........................ggAACCGCCTCTCTCTCTCTGTCT  Raphanus sativus var. oleiformis
EW718950       <-- ..........................ggAACCGCCTCTCTCTCTCTGTCT  Raphanus sativus var. oleiformis
FD552513       <-- ............................................ggGTCT  Raphanus raphanistrum subsp. landra
FD529157       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX777706       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD532789       --> GGGATCCATCAACATTCTTTCGAACAGCTACCGCCTCTCTCTCTCTCTCT  Raphanus raphanistrum subsp. maritimus
FD562753       --> GGGATCCATCAACATTCTTTCGAACAGCAACCGCCTCTCTCTCTCTGTCT  Raphanus sativus var. oleiformis
EV528088       --> ..gggCCATCAACATTCTTTCGAACAGCGACCGCCTCTCTCTCTCTCTCT  Raphanus raphanistrum subsp. maritimus
EY938133       --> ......gATCAACATTCTTTCGAACAGCAACCGCCTCTCTCTCTCTGTCT  Raphanus sativus cv Early Scarlet Globe
EW714788       --> ..........................ggAACCGCCTCTCTCTCTCTGTCT  Raphanus sativus var. oleiformis
EW714799       --> ..........................ggAACCGCCTCTCTCTCTCTGTCT  Raphanus sativus var. oleiformis
FY436936       --> ..............................gcctCTCTCTCTCTCTCTCT  Raphanus sativus cv GSK3-1
FD556162       --> ............................................ggGTCT  Raphanus raphanistrum subsp. landra
FY431733       --> ..................................................  Raphanus sativus cv GSK3-1
FY430407       --> ..................................................  Raphanus sativus cv GSK3-1
EX773915       --> ..................................................  Raphanus raphanistrum subsp. landra

               51     -    101
UN22117        --> CT--ATTCATCCTTGTTCATTGGAACATCCGAGACGACTTCTTCATCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD566580       <-- CT--ATTCATCCTTGTTCATTGGAACATCCGAGACGACTTCTTCATCTTC
EV532170       <-- CT--ATTCATCCTTGTTCATTGGAACATTCGAGACGACTTCTTCATCTTC
EY934331       <-- CT--ATTCATCCTTGTTCATTGGAACATCCGAGACGACTTCTTCATCTTC
EW718939       <-- CT--ATTCATCCTTGTTCATTGGAACATCCGAGACGACTTCTTCATCTTC
EW718950       <-- CT--ATTCATCCTTGTTCATTGGAACATCCGAGACGACTTCTTCATCTTC
FD552513       <-- CT--ATTCATCCTTGTTCATTGGAACATCCGAGACGACTTCTTCATCTTC
FD529157       <-- .........................................TTCATCTTC
EX777706       <-- ..............................ggttctctgaatctttcaat
FD532789       --> CTCTATTCATCCTTGTTCATTGGAACATTCGAGATGACTTCTTCATCTTC
FD562753       --> CT--ATTCATCCTTGTTCATTGGAACATCCGAGACGACTTCTTCATCTTC
EV528088       --> CT--ATTCATCCTTGTTCATTGGAACATTCGAGACGACTTCTTCATCTTC
EY938133       --> CT--ATTCATCCTTGTTCATTGGAACATCCGAGACGACTTCTTCATCTTC
EW714788       --> CT--ATTCATCCTTGTTCATTGGAACATCCGAGACGACTTCTTCATCTTC
EW714799       --> CT--ATTCATCCTTGTTCATTGGAACATCCGAGACGACTTCTTCATCTTC
FY436936       --> CT--ATTCATCCTTGTTCATTGGAACATCCGAGACGACTTCTTCATCTTC
FD556162       --> CT--ATTCATCCTTGTTCATTGGAACATCCGAGACGACTTCTTCATCTTC
FY431733       --> .......CATCCTTGTTCATTGGAACATCCGAGACGACTTCTTCATCTTC
FY430407       --> .......................gACATCCGAGACGACTTCTTCATCTTC
EX773915       --> ..............................ggttctctgaatctttcaat

               101    -    151
UN22117        --> AAGGTATCAGAAAGCT-ATATTTT-GAGCCATGAGCACAGTGACCAGGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD566580       <-- AAGGTATCGGAA-GCTAATATTTTTGAGCCATGAGCACAGTGACCAGGCC  Raphanus sativus var. oleiformis
EV532170       <-- AAGGTATCAGAAAGCT-ATATTTT-GAGCCATGAGCACAGTGACCAGGCC  Raphanus raphanistrum subsp. maritimus
EY934331       <-- AAGGTATCGGAA-GCTAATATTTTTGAGCCATGAGCACAGTGACCAGGCC  Raphanus sativus cv Early Scarlet Globe
EW718939       <-- AAGGTATCGGAA-GCTAATATTTTTGAGCCATGAGCACAGTGACCAGGCC  Raphanus sativus var. oleiformis
EW718950       <-- AAGGTATCGGAA-GCTAATATTTTTGAGCCATGAGCACAGTGACCAGGCC  Raphanus sativus var. oleiformis
FD552513       <-- AAGGTATCAGAAAGCT-ATATTTT-GAGCCATGAGCACAGTGACCAGGCC  Raphanus raphanistrum subsp. landra
FD529157       <-- AAGGTATCAGAAAGCT-ATATTTT-GAGCCATGAGCACAGTGACCAGGCC  Raphanus raphanistrum subsp. maritimus
EX777706       <-- cAGGTATCAGAAAGCT-ATATTTT-GAGCCATGAGCACAGTGACCAGGCC  Raphanus raphanistrum subsp. landra
FD532789       --> AAGGTATCAGAAAGCT-ATATTTT-GAGCCATGAGCACAGTGACCAGGCC  Raphanus raphanistrum subsp. maritimus
FD562753       --> AAGGTATCGGAA-GCTAATATTTTTGAGCCATGAGCACAGTGACCAGGCC  Raphanus sativus var. oleiformis
EV528088       --> AAGGTATCAGAAAGCT-ATATTTT-GAGCCATGAGCACAGTGACCAGGCC  Raphanus raphanistrum subsp. maritimus
EY938133       --> AAGGTATCGGAA-GCTAATATTTTTGAGCCATGAGCACAGTGACCAGGCC  Raphanus sativus cv Early Scarlet Globe
EW714788       --> AAGGTATCGGAA-GCTAATATTTTTGAGCCATGAGCACAGTGACCAGGCC  Raphanus sativus var. oleiformis
EW714799       --> AAGGTATCGGAA-GCTAATATTTTTGAGCCATGAGCACAGTGACCAGGCC  Raphanus sativus var. oleiformis
FY436936       --> AAGGTATCGGAAAGCT-ATATTTT-GAGCCATGAGCACAGTGACCAGGCC  Raphanus sativus cv GSK3-1
FD556162       --> AAGGTATCAGAAAGCT-ATATTTT-GAGCCATGAGCACAGTGACCAGGCC  Raphanus raphanistrum subsp. landra
FY431733       --> AAGGTATCGGAAAGCT-ATATTTT-GAGCCATGAGCACAGTGACCAGGCC  Raphanus sativus cv GSK3-1
FY430407       --> A-GGTATCGGAAAGCT-ATATTTT-GAGCCATGAGCACAGTGACCAGGCC  Raphanus sativus cv GSK3-1
EX773915       --> cAGGTATCAGAAAGCT-ATATTTT-GAGCCATGAGCACAGTGACCAGGCC  Raphanus raphanistrum subsp. landra

               151    -    201
UN22117        --> TTCTTCTTCAGCGACAACCTCTGTCATCTTAGAAACCCCTGTTTCTCAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD566580       <-- TTCTTCTTCAGCGACAACCTCTGTCATCTTAGAAACCCCTGTTTTTCAGT
EV532170       <-- TTCTTCTTCAGCGACAACCTCTGTCATTTTAGAAACCCCTGTTTTTCAGT
EY934331       <-- TTCTTCTTCAGCGACAACCTCTGTCATCTTAGAAACCCCTGTTTCTCAGT
EW718939       <-- TTCTTCTTCAGCGACAACCTCTGTCATCTTAGAAACCCCTGTTTCTCAGT
EW718950       <-- TTCTTCTTCAGCGACAACCTCTGTCATCTTAGAAACCCCTGTTTCTCAGT
FD552513       <-- TTCTTCTTCAGCGACAACCTCTGTCATCTTAGAAACCCCTGTTTCTCAGT
FD529157       <-- TTTTTCTTCAGCGACAACCTCTGTCATTTTAGAAACCCCTGTTTTTCAGT
EX777706       <-- TTCTTCTTCAGCGACAACCTCTGTCATCTTAGAAACCCCTGTTTCTCAGT
FD532789       --> TTCTTCTTCAGCGACAACCTCTGTCATCTTAGAAACCCCTGTTTCTCAGT
FD562753       --> TTCTTCTTCAGCGACAACCTCTGTCATCTTAGAAACCCCTGTTTCTCAGT
EV528088       --> TTCTTCTTCAGCGACAACCTCTGTCATCTTAGAAACCCCTGTTTCTCAGT
EY938133       --> TTCTTCTTCAGCGACAACCTCTGTCATCTTAGAAACCCCTGTTTCTCAGT
EW714788       --> TTCTTCTTCAGCGACAACCTCTGTCATCTTAGAAACCCCTGTTTCTCAGT
EW714799       --> TTCTTCTTCAGCGACAACCTCTGTCATCTTAGAAACCCCTGTTTCTCAGT
FY436936       --> TTCTTCTTCAGCGACAACCTCTGTCATCTTAGAAACCCCTGTTTCTCAGT
FD556162       --> TTCTTCTTCAGCGACAACCTCTGTCATCTTAGAAACCCCTGTTTCTCAGT
FY431733       --> TTCTTCTTCAGCGACAACCTCTGTCATCTTAGAAACCCCTGTTTCTCAGT
FY430407       --> TTCTTCTTCAGCGACAACCTCTGTCATCTTAGAAACCCCTGTTTCTCAGT
EX773915       --> TTCTTCTTCAGCGACAACCTCTGTCATCTTAGAAACCCCTGTTTCTCAGT

               201    -    251
UN22117        --> CACAGCCTACAGAAAGATTAGTGCTTCGGTTGAACAGGAAGAAGAAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD566580       <-- CACAGCCTACAGAAAGACTAGTGCTTCGGCTGAACAGGAAGAAGAAGAAA  Raphanus sativus var. oleiformis
EV532170       <-- CACAGCCTACAGAAAGATTAGTGCTTCGTTTGAACAGGAAGAAGAAGAAA  Raphanus raphanistrum subsp. maritimus
EY934331       <-- CACAGCCTACAGAAAGACTAGTGCTTCGGCTGAACAGGAAGAAGAAGAAA  Raphanus sativus cv Early Scarlet Globe
EW718939       <-- CACAGCCTACAGAAAGACTAGTGCTTCGGCTGAACAGGAAGAAGAAGAAA  Raphanus sativus var. oleiformis
EW718950       <-- CACAGCCTACAGAAAGACTAGTGCTTCGGCTGAACAGGAAGAAGAAGAAA  Raphanus sativus var. oleiformis
FD552513       <-- CACAGCCTACAGAAAGATTAGTGCTTCGTTTGAACAGGAAGAAGAAGAAA  Raphanus raphanistrum subsp. landra
FD529157       <-- CACAGCCTACAGAAAGATTAGTGCTTCGTTTGAACAGGAAGAAGAAGAAA  Raphanus raphanistrum subsp. maritimus
EX777706       <-- CACAGCCTACAGAAAGATTAGTGCTTCGTTTGAACAGGAAGAAGAAGAAA  Raphanus raphanistrum subsp. landra
FD532789       --> CACAGCCTACAGAAAGATTAGTGCTTCGTTTGAACAGGAAGAAGAAGAAA  Raphanus raphanistrum subsp. maritimus
FD562753       --> CACAGCCTACAGAAAGACTAGTGCTTCGGCTGAACAGGAAGAAGAAGAAA  Raphanus sativus var. oleiformis
EV528088       --> CACAGCCTACAGAAAGATTAGTGCTTCGTTTGAACAGGAAGAAGAAGAAA  Raphanus raphanistrum subsp. maritimus
EY938133       --> CACAGCCTACAGAAAGACTAGTGCTTCGGCTGAACAGGAAGAAGAAGAAA  Raphanus sativus cv Early Scarlet Globe
EW714788       --> CACAGCCTACAGAAAGACTAGTGCTTCGGCTGAACAGGAAGAAGAAGAAA  Raphanus sativus var. oleiformis
EW714799       --> CACAGCCTACAGAAAGACTAGTGCTTCGGCTGAACAGGAAGAAGAAGAAA  Raphanus sativus var. oleiformis
FY436936       --> CACAGCCCACAGAAAGATTAGTGCTTCGGTTGAACAGGAAGAAGAAGAAA  Raphanus sativus cv GSK3-1
FD556162       --> CACAGCCTACAGAAAGATTAGTGCTTCGTTTGAACAGGAAGAAGAAGAAA  Raphanus raphanistrum subsp. landra
FY431733       --> CACAGCCCACAGAAAGATTAGTGCTTCGGTTGAACAGGAAGAAGAAGAAA  Raphanus sativus cv GSK3-1
FY430407       --> CACAGCCCACAGAAAGATTAGTGCTTCGGTTGAACAGGAAGAAGAAGAAA  Raphanus sativus cv GSK3-1
EX773915       --> CACAGCCTACAGAAAGATTAGTGCTTCGTTTGAACAGGAAGAAGAAGAAA  Raphanus raphanistrum subsp. landra

               251    -    301
UN22117        --> GTCTCCTGGAAAGACGGCACAGTTGATAACGAGTTCATGCAGAA-GAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD566580       <-- GTCTTCTGGAAAGACGGCACAGTTGATAACGAGTTCATGCAGAA-GAAGA
EV532170       <-- GTCTCCTGGAAAGACGGCACAGTTGATAACGAGTTCATGCAGAA-GAAGA
EY934331       <-- GTCTCCTGGAAAGACGGCACAGTTGATAACGAGTTCATGCAGAA-GAAGA
EW718939       <-- GTCTCCTGGAAAGACGGCACAGTTGATAACGAGTTCATGCAGAA-GAAGA
EW718950       <-- GTCTCCTGGAAAGACGGCACAGTTGATAACGAGTTCATGCAGAA-GAAGA
FD552513       <-- GTCTCCTGGAAAGACGGCACAGTTGATAACGAGTTCATGCAGAA-GAAGA
FD529157       <-- GTCTCCTGGAAAGACGGCACAGTTGATAACGAGTTCATGCAGAA-GAAGA
EX777706       <-- GTCTCCTGGAAAGACGGCACAGTTGATAACGAGTTCATGCAGAA-GAAGA
FD532789       --> GTCTCCTGGAAAGACGGCACAGTTGATAACGAGTTCATGCAGAA-GAAGA
FD562753       --> GTCTTCTGGAAAGACGGCACAGTTGATAACGAGTTCATGCAGAA-GAAGA
EV528088       --> GTCTCCTGGAAAGACGGCACAGTTGATAACGAGTTCATGCAGAA-GAAGA
EY938133       --> GTCTCCTGGAAAGACGGCACAGTTGATAACGAGTTCATGCAGAA-GAAGA
EW714788       --> GTCTCCTGGAAAGACGGCACAGTTGATAACGAGTTCATGCAGAA-GAAGA
EW714799       --> GTCTCCTGGAAAGACGGCACAGTTGATAACGAGTTCATGCAGAA-GAAGA
FY436936       --> GTCTCCTGGAAAGACGGCACAGTTGATAACGAGTTCATGCAGAAAGAAGA
FD556162       --> GTCTCCTGGAAAGACGGCACAGTTGATAACGAGTTCATGCAGAA-GAAGA
FY431733       --> GTCTCCTGGAAAGACGGCACAGTTGATAACGAGTTCATGCAGAA-GAAGA
FY430407       --> GTCTCCTGGAAAGACGGCACAGTTGATAACGAGTTCATGCAGAA-GAAGA
EX773915       --> GTCTCCTGGAAAGACGGCACAGTTGATAACGAGTTCATGCAGAA-GAAGA

               301    -    351
UN22117        --> GTTCC-AAGAAATGTTGCATCTTTCACAAACAGAAGCCCTTTGATGAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD566580       <-- GTTCC-AAGAAATGTTGCATCTTTCACAAACAGAAGCCCTTTGATGAGGA
EV532170       <-- GTTCC-AAGAAATGTTGCATCTTTCACAAACAGAAGCCCTTTGATGAGGA
EY934331       <-- GTTCC-AAGAAATGTTGCATCTTTCACAAACAGAAGCCCTTTGATGAGGA
EW718939       <-- GTTCC-AAGAAATGTTGCATCTTTCACAAACAGAAGCCCTTTGATGAGGA
EW718950       <-- GTTCC-AAGAAATGTTGCATCTTTCACAAACAGAAGCCCTTTGATGAGGA
FD552513       <-- GTTCC-AAGAAATGTTGCATCTTTCACAAACAGAAGCCCTTTGATGAGGA
FD529157       <-- GTTCC-AAGAAATGTTGCATCTTTCACAAACAGAAGCCCTTTGATGAGGA
EX777706       <-- GTTCC-AAGAAATGTTGCATCTTTCACAAACAGAAGCCCTTTGATGAGGA
FD532789       --> GTTCC-AAGAAATGTTGCATCTTTCACAAACAGAAGCCCTTTGATGAGGA
FD562753       --> GTTCC-AAGAAATGTTGCATCTTTCACAAACAGAAGCCCTTTGATGAGGA
EV528088       --> GTTCC-AAGAAATGTTGCATCTTTCACAAACAGAAGCCCTTTGATGAGGA
EY938133       --> GTTCC-AAGAAATGTTGCATCTTTCACAAACAGAAGCCCTTTGATGAGGA
EW714788       --> GTTCC-AAGAAATGTTGCATCTTTCACAAACAGAAGCCCTTTGATGAGGA
EW714799       --> GTTCC-AAGAAATGTTGCATCTTTCACAAACAGAAGCCCTTTGATGAGGA
FY436936       --> GTTCCCAAGAAATGTTGCATCTT...........................
FD556162       --> GTTCC-AAGAAATGTTGCATCTTTCACAAACAGAAGCCCTTTGATGAGGA
FY431733       --> GTTCC-AAGAAATGTTGCATCTTTCACAAACAGAAGCCCTTTGATGAGGA
FY430407       --> GTTCC-AAGAAATGTTGCATCTTTCACAAACAGAAGCCCTTTGATGAGGA
EX773915       --> GTTCC-AAGAAATGTTGCATCTTTCACAAACAGAAGCCCTTTGATGAGGA

               351    -    401
UN22117        --> TGACAGCGAAGAAGATGATGATGATAACCACCACGATCATGATCATGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD566580       <-- TGACAGCGAAGAAGATGATGATGATAACCACCACGATCATGATCATGATC  Raphanus sativus var. oleiformis
EV532170       <-- TGACAGCGAAGAAGATGATGATGATAACCACCACCACCATGATCATGATC  Raphanus raphanistrum subsp. maritimus
EY934331       <-- TGACAGCGAAGAAGATGATGATGATAACCACCACGATCATGATCATGATC  Raphanus sativus cv Early Scarlet Globe
EW718939       <-- TGACAGCGAAGAAGATGATGATGATAACCACCACGATCATGATCATGATC  Raphanus sativus var. oleiformis
EW718950       <-- TGACAGCGAAGAAGATGATGATGATAACCACCACGATCATGATCATGATC  Raphanus sativus var. oleiformis
FD552513       <-- TGACAGCGAAGAAGATGATGATGATAACCACCACCACCATGATCATGATC  Raphanus raphanistrum subsp. landra
FD529157       <-- TGACAGCGAAGAAGATGATGATGATAACCACCACCACCATGATCATGATC  Raphanus raphanistrum subsp. maritimus
EX777706       <-- TGACAGCGAAGAAGATGATGATGATAACCACCACCACCATGATCATGATC  Raphanus raphanistrum subsp. landra
FD532789       --> TGACAGCGAAGAAGATGATGATGATAACCACCACCACCATGATCATGATC  Raphanus raphanistrum subsp. maritimus
FD562753       --> TGACAGCGAAGAAGATGATGATGATAACCACCACGATCATGATCATGATC  Raphanus sativus var. oleiformis
EV528088       --> TGACAGCGAAGAAGATGATGATGATAACCACCACCACCATGATCATGATC  Raphanus raphanistrum subsp. maritimus
EY938133       --> TGACAGCGAAGAAGATGATGATGATAACCACCACGATCATGATCATGATC  Raphanus sativus cv Early Scarlet Globe
EW714788       --> TGACAGCGAAGAAGATGATGATGATAACCACCACGATCATGATCATGATC  Raphanus sativus var. oleiformis
EW714799       --> TGACAGCGAAGAAGATGATGATGATAACCACCACGATCATGATCATGATC  Raphanus sativus var. oleiformis
FY436936       --> ..................................................  Raphanus sativus cv GSK3-1
FD556162       --> TGACAGCGAAGAAGATGATGATGATAACCACCACCACCATGATCATGATC  Raphanus raphanistrum subsp. landra
FY431733       --> TGACAGCGAAGAAGATGATGATGATAACCACCACGATCATGATCATGATC  Raphanus sativus cv GSK3-1
FY430407       --> TGACAGCGAAGAAGATGATGATGATAACCACCACGATCATGATCATGATC  Raphanus sativus cv GSK3-1
EX773915       --> TGACAGCGAAGAAGATGATGATGATAACCACCACCACCATGATCATGATC  Raphanus raphanistrum subsp. landra

               401    -    451
UN22117        --> ATAACCACGAACACTGCGAATCTGGTGAGGCCTCTTCTTCTAACGGTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD566580       <-- ATGACCATGAACACTGCGAATCTGGTGAGGCCTCTTCTTCTAACGGTTCC  Raphanus sativus var. oleiformis
EV532170       <-- ATAACCACGAACACTGCGAATCTGGTGAGGCCTCTTCTTCTAACGGTTCC  Raphanus raphanistrum subsp. maritimus
EY934331       <-- ATGACCATGAACACTGCGAATCTGGTGAGGCCTCTTCTTCTAACGGTTCC  Raphanus sativus cv Early Scarlet Globe
EW718939       <-- ATGACCATGAACACTGCGAATCTGGTGAGGCCTCTTCTTCTAACGGTTCC  Raphanus sativus var. oleiformis
EW718950       <-- ATGACCATGAACACTGCGAATCTGGTGAGGCCTCTTCTTCTAACGGTTCC  Raphanus sativus var. oleiformis
FD552513       <-- ATAACCACGAACACTGCGAATCTGGTGAGGCCTCTTCTTCTAACGGTTCC  Raphanus raphanistrum subsp. landra
FD529157       <-- ATAACCACGAACACTGCGAATTTGGTGAGGCCTCTTTTTCTAACGGTTCC  Raphanus raphanistrum subsp. maritimus
EX777706       <-- ATAACCACGAACACTGCGAATCTGGTGAGGCCTCTTCTTCTAACGGTTCC  Raphanus raphanistrum subsp. landra
FD532789       --> ATAACCACGAACACTGCGAATCTGGTGAGGCCTCTTCTTCTAACGGTTCC  Raphanus raphanistrum subsp. maritimus
FD562753       --> ATGACCATGAACACTGCGAATCTGGTGAGGCCTCTTCTTCTAACGGTTCC  Raphanus sativus var. oleiformis
EV528088       --> ATAACCACGAACACTGCGAATCTGGTGAGGCCTCTTCTTCTAACGGTTCC  Raphanus raphanistrum subsp. maritimus
EY938133       --> ATGACCATGAACACTGCGAATCTGGTGAGGCCTCTTCTTCTAACGGTTCC  Raphanus sativus cv Early Scarlet Globe
EW714788       --> ATGACCATGAACACTGCGAATCTGGTGAGGCCTCTTCTTCTAACGGTTCC  Raphanus sativus var. oleiformis
EW714799       --> ATGACCATGAACACTGCGAATCTGGTGAGGCCTCTTCTTCTAACGGTTCC  Raphanus sativus var. oleiformis
FY436936       --> ..................................................  Raphanus sativus cv GSK3-1
FD556162       --> ATAACCACGAACACTGCGAATCTGGTGAGGCCTCTTCTTCTAACGGTTCC  Raphanus raphanistrum subsp. landra
FY431733       --> ATAACCACGAACACTGCGAATCTGGTGAGGCCTCTTCGTCTAACGGTTCC  Raphanus sativus cv GSK3-1
FY430407       --> ATAACCACGAACACTGCGAATCTGGTGAGGCCTCTTCGTCTAACGGTTCC  Raphanus sativus cv GSK3-1
EX773915       --> ATAACCACGAACACTGCGAATCTGGTGAGGCCTCTTCTTCTAACGGTTCC  Raphanus raphanistrum subsp. landra

               451    -    501
UN22117        --> AAAGCAGCTAATTAATCAATTGAGAGTTTTTTTCACATCATAATATAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD566580       <-- AAAGCAGCTAATTAATCAATTGAGAGTTTTTTTCACATCATAATATAGAG
EV532170       <-- AAAGCAGCTAATTAATCAATTGAGAGTTTTTTTCACATCATAATATAGAG
EY934331       <-- AAAGCAGCTAATTAATCAATTGAGAGTTTTTTTCACATCATAATATAGAG
EW718939       <-- AAAGCAGCTAATTAATCAATTGAGAGTTTTTTTCACATCATAATATAGAG
EW718950       <-- AAAGCAGCTAATTAATCAATTGAGAGTTTTTTTCACATCATAATATAGAG
FD552513       <-- AAAGCAGCTAATTAATCAATTGAGAGTTTTTTTCACATCATAATATAGAG
FD529157       <-- AAAGCAGCTAATTAATCAATTGAGAGTTTTTTTCACATCATAATATAGAG
EX777706       <-- AAAGCAGCTAATTAATCAATTGAGAGTTTTTTTCACATCATAATATAGAG
FD532789       --> AAAGCAGCTAATTAATCAATTGAGAGTTTTTTTCACATCATAATATAGAG
FD562753       --> AAAGCAGCTAATTAATCAATTGAGAGTTTTTTTCACATCATAATATAGAG
EV528088       --> AAAGCAGCTAATTAATCAATTGAGAGTTTTTTTCACATCATAATATAGAG
EY938133       --> AAAGCAGCTAATTAATCAATTGAGAGTT......................
EW714788       --> AAAGCAGCTAATTAATCAATTGAGAGTTTTTTTCACATCATAATATAGAG
EW714799       --> AAAGCAGCTAATTAATCAATTGAGAGTTTTTTTCACATCATAATATAGAG
FY436936       --> ..................................................
FD556162       --> AAAGCAGCTAATTAATCAATTGAGAGTTTTTTTCACATCATAATATAGAG
FY431733       --> AAAGCAGCTAATTAATCAATTGAGAGTTTTTTTCACATCATAATATAGAG
FY430407       --> AAAGCAGCTAATTAATCAATTGAGAGTTTTTTTCACATCATAATATAGAG
EX773915       --> AAAGCAGCTAATTAATCAATTGAGAGTTTTTTTCACATCATAATATAGAG

               501    -    551
UN22117        --> ATATTTGAAGCTTTATAATATGTCATGGAAGAACACTTATTCGTCTGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD566580       <-- ATATTTGAAGCTTTATAATATGTCATGGAAGAACACTTATTCGTCTGAGG  Raphanus sativus var. oleiformis
EV532170       <-- ATATTGGAAGCTTTATAATATGTCATGGAAGACCACTTATTCGTCTGAGG  Raphanus raphanistrum subsp. maritimus
EY934331       <-- ATATTTGAAGCTTTATAATATGTCATGGAAGAACACTTATTCGTCTGAGG  Raphanus sativus cv Early Scarlet Globe
EW718939       <-- ATATTTGAAGCTTTATAATATGTCATGGAAGAACACTTATTCGTCTGAGG  Raphanus sativus var. oleiformis
EW718950       <-- ATATTTGAAGCTTTATAATATGTCATGGAAGAACACTTATTCGTCTGAGG  Raphanus sativus var. oleiformis
FD552513       <-- ATATTTGAAGCTTTATAATATGTCATGGAAGACCACTTATTCGTCTGAGG  Raphanus raphanistrum subsp. landra
FD529157       <-- ATATTGGAAGCTTTATAATATGTCATGGAAGACCACTTATTCGTTTGAGG  Raphanus raphanistrum subsp. maritimus
EX777706       <-- ATATTTGAAGCTTTATAATATGTCATGGAAGACCACTTATTCGTCTGAGG  Raphanus raphanistrum subsp. landra
FD532789       --> ATATTGGAAGCTTTATAATATGTCATGGAAGACCACTTATTCGTCTGAGG  Raphanus raphanistrum subsp. maritimus
FD562753       --> ATATTTGAAGCTTTATAATATGTCATGGAAGAACACTTATTCGTCTGAGG  Raphanus sativus var. oleiformis
EV528088       --> ATATTGGAAGCTTTATAATATGTCATGGAAGACCACTTATTCGTCTGAGG  Raphanus raphanistrum subsp. maritimus
EY938133       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW714788       --> ATATTTGAAGCTTTATAATATGTCATGGAAGAACACTTATTCGTCTGAGG  Raphanus sativus var. oleiformis
EW714799       --> ATATTTGAAGCTTTATAATATGTCATGGAAGAACACTTATTCGTCTGAGG  Raphanus sativus var. oleiformis
FY436936       --> ..................................................  Raphanus sativus cv GSK3-1
FD556162       --> ATATTTGAAGCTTTATAATATGTCATGGAAGACCACTTATTCGTCTGAGG  Raphanus raphanistrum subsp. landra
FY431733       --> ATATTTGAAGCTTTATAATATGTCATGGAAGAACACTTATTCGTCTGAGG  Raphanus sativus cv GSK3-1
FY430407       --> ATATTTGAAGCTTTATAATATGTCATGGAAGAACACTTATTCGTCTGAGG  Raphanus sativus cv GSK3-1
EX773915       --> ATATTTGAAGCTTTATAATATGTCATGGAAGACCACTTATTCGTCTGAGG  Raphanus raphanistrum subsp. landra

               551    -    601
UN22117        --> TTTTGGGTTCTCATGATCTTCTCTTCTTCTACTTGACACAGCAAC-ACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD566580       <-- TTTTGGGTTCTCATGATTTTCTCTTCTTCTACTTGACACAGC........  Raphanus sativus var. oleiformis
EV532170       <-- TTTTGGGTTCTAATGATCTTCTCTTCTTCTACTTGACACAGCAAC-ACTG  Raphanus raphanistrum subsp. maritimus
EY934331       <-- TTTTGGGTTCTCATGATTTTCTCTTCTTCTACTTGACACAGCAAC-ACTG  Raphanus sativus cv Early Scarlet Globe
EW718939       <-- TTTTGGGTTCTCATGATTTTCTCTTCTTCTACTTGACACAGCAACTACTG  Raphanus sativus var. oleiformis
EW718950       <-- TTTTGGGTTCTCATGATTTTCTCTTCTTCTACTTGACACAGCAAC-ACTG  Raphanus sativus var. oleiformis
FD552513       <-- TTTTGGGTTCTCATGATCTTCTCTTCTTCTACTTGACACAGCAAT-ACTG  Raphanus raphanistrum subsp. landra
FD529157       <-- TTTTGGGTTTTAATGATTTTTTCTTTTTTTACTTGACACAGCAAC-ACTG  Raphanus raphanistrum subsp. maritimus
EX777706       <-- TTTTGGGTTCTCATGATCTTCTCTTCTTCTACTTGACACAGCAAC-ACTG  Raphanus raphanistrum subsp. landra
FD532789       --> TTTTGGGTTCTAATGATCTTCTCTTCTTCTACTTGACACAGCAAC-ACTG  Raphanus raphanistrum subsp. maritimus
FD562753       --> TTTTGGGTTCTCATGATTTTCTCTTCTTCTACTTGACACAGC........  Raphanus sativus var. oleiformis
EV528088       --> TTTTGGGTTCTAATGATCTTCTCTTCTTCTACTTGACACAGCAAC-ACTG  Raphanus raphanistrum subsp. maritimus
EY938133       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW714788       --> TTTTGGGTTCTCATGATTTTCTCTTCTTCTACTTGACACAGCAAC-ACTG  Raphanus sativus var. oleiformis
EW714799       --> TTTTGGGTTCTCATGATTTTCTCTTCTTCTACTTGACACAGCAAC-ACTG  Raphanus sativus var. oleiformis
FY436936       --> ..................................................  Raphanus sativus cv GSK3-1
FD556162       --> TTTTGGGTTCTCATGATCTTCTCTTCTTCTACTTGACACAGCAAT-ACTG  Raphanus raphanistrum subsp. landra
FY431733       --> TTTTGGGTTCTCATGATCTTCTCTTCTTCTACTTGACACAGCAAC-ACTG  Raphanus sativus cv GSK3-1
FY430407       --> TTTTGGGTTCTCATGATCTTCTCTTCTTCTACTTGACACAGCAAC-ACTG  Raphanus sativus cv GSK3-1
EX773915       --> TTTTGGGTTCTCATGATCTTCTCTTCTTCTACTTGACACAGCAAC-ACTG  Raphanus raphanistrum subsp. landra

               601    -    651
UN22117        --> GTTGGGCTTTATTAGTATATGTAC-ATGTAATTTGCATATTGCACTGTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD566580       <-- ..................................................
EV532170       <-- GTTGGGCTTTATTAGTATATGTAC-ATGTAATTTGCATATTGCACTGTAA
EY934331       <-- GTTGGGCTTTATTAGTATATGTAC-ATGTAATTTGCATATTGCACTGTAA
EW718939       <-- GTTGGGCTTTATTAGTATATGTACTATGTAATTTGCATATTGCACTGTAA
EW718950       <-- GTTGGGCTTTATTAGTATATGTAC-ATGTAATTTGCATATTGCACTGTAA
FD552513       <-- GTTGGGCTTTATTAGTATATGTAC-ATGTAATTTGCATATTGCACTGTAA
FD529157       <-- GTTGGGCTTTATTAGTATATGTAC-ATGTAATTTGCATATTGCACTGTAA
EX777706       <-- GTTGGGCTTTATTAGTATATGTAC-ATGTAATTTGCATATTGCACTGTAA
FD532789       --> GTTGGGCTTTATTAGTATATGTAC-ATGTAATTTGCATATTGCACTGTAA
FD562753       --> ..................................................
EV528088       --> GTTGGGCTTTATTAGTATATGTAC-ATGTAATTTGCATATTGCACTGTAA
EY938133       --> ..................................................
EW714788       --> GTTGGGCTTTATTAGTATATGTAC-ATGTAATTTGCATATTGCACTGTAA
EW714799       --> GTTGGGCTTTATTAGTATATGTAC-ATGTAATTTGCATATTGCACTGTAA
FY436936       --> ..................................................
FD556162       --> GTTGGGCTTTATTAGTATATGTAC-ATGTAATTTGCATATTGCACTGTAA
FY431733       --> GTTGGGCTTTATTAGTATATGTAC-ATGTAATTTGCATATTGCACTGTAA
FY430407       --> GTTGGGCTTTATTAGTATATGTAC-ATGTAATTTGCATATTGCACTGTAA
EX773915       --> GTTGGGCTTTATTAGTATATGTAC-ATGTAATTTGCATATTGCACTGTAA

               651    -    701
UN22117        --> TGATATTATTCATTGCAATGCTGATTTAAACTACTTAAATCTGTAAAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD566580       <-- ..................................................
EV532170       <-- TGATATTATTCATTGCAATGCTGATTTAAACTACTTAAATCTGTAAAGAC
EY934331       <-- TGATATTATTCATTGCAATGCTGATTTAAACTACTTAAATCTGTAAAGAC
EW718939       <-- TGATATTATTCATTGCAATGCTGATTT.......................
EW718950       <-- TGATATTATTCATTGCAATGCTGATTT.......................
FD552513       <-- TGATATTATTCATTGCAATGCTGATTTAAACTACTTAAATCTGTAAAGAC
FD529157       <-- TGATATTATTCATTGCAATGCTGATTTAAACTACTTAAATCTGTAAAGAC
EX777706       <-- TGATATTATTCATTGCAATGCTGATTTAAACTACTTAAATCTGTAAAGAC
FD532789       --> TGATATTATTCATTGCAATGCTGATTTAAACTACTTAAATCTGTAAAGAC
FD562753       --> ..................................................
EV528088       --> TGATATTATTCATTGCAATGCTGATTTAAACTACTTAAATCTGTAAAGAC
EY938133       --> ..................................................
EW714788       --> TGATATTATTCATTGCAATGCTGATTT.......................
EW714799       --> TGATATTATTCATTGCAATGCTGATTT.......................
FY436936       --> ..................................................
FD556162       --> TGATATTATTCATTGCAATGCTGATTTAAACTACTTAAATCTGTAAAGAC
FY431733       --> TGATATTATTCATTGCAATGCTGATTTAAACTACTTAAATCTGTAAAGAC
FY430407       --> TGATATTATTCATTGCAATGCTG...........................
EX773915       --> TGATATTATTCATTGCAATGCTGATTTAAACTACTTAAATCTGTAAAGAC

               701    -    751
UN22117        --> AATTATGTGAGAGCATCTTTTCAGTTATGATCGTTTAATACTTACTAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD566580       <-- ..................................................
EV532170       <-- AATTATGTGAGAGCATCTTTTCAGTTATGATCGTTTAATACTT.......
EY934331       <-- AATTATGTGAGAGCATCTTTTCAATTATGATCGTTT..............
EW718939       <-- ..................................................
EW718950       <-- ..................................................
FD552513       <-- AATTATGTGAGAGCATCTTTTCAGTTATGATCGTTT..............
FD529157       <-- AATTATGTGAGAGCATCTTTTCAGTTAcg.....................
EX777706       <-- AATTATGTGAGAGCATCTTTTCAGTTATGATCGTTTAATACTTACTAAAC
FD532789       --> AATTATGTGAGAGCATCTTTTCAGTTA.......................
FD562753       --> ..................................................
EV528088       --> AATTATGTGAGAGCATCTTTTCAGTTATGATCGTTTAATACTT.......
EY938133       --> ..................................................
EW714788       --> ..................................................
EW714799       --> ..................................................
FY436936       --> ..................................................
FD556162       --> AATTATGTGAGAGCATCTTTTCAGTTATGATCGTTTAATAaaagaaa...
FY431733       --> AATTATGTGAGA......................................
FY430407       --> ..................................................
EX773915       --> AATTATGTGAGAGCATCTTTTCAGTTATGATCGTTTAATACTTACTAAAC

               751    -    801
UN22117        --> CAGCTCCTACGTTGG
                   ~~~~~~~~~~~~~~~
FD566580       <-- ...............
EV532170       <-- ...............
EY934331       <-- ...............
EW718939       <-- ...............
EW718950       <-- ...............
FD552513       <-- ...............
FD529157       <-- ...............
EX777706       <-- CAGCTCCTACGTTGG
FD532789       --> ...............
FD562753       --> ...............
EV528088       --> ...............
EY938133       --> ...............
EW714788       --> ...............
EW714799       --> ...............
FY436936       --> ...............
FD556162       --> ...............
FY431733       --> ...............
FY430407       --> ...............
EX773915       --> CAGCTCCTACGTTGG