1      -     51
UN22142        --> CCTTATTGTCCTCGCATTTGAAGTCAGAAAATGTGAAGAAATTATTTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443463       <-- ................................GTGAAGAAATTATTTCAT
FY444479       <-- ..................................GAAGAAATTATTTCAT
FY444521       <-- ..................................GAAGAAATTATTTCAT
EV538262       <-- ..................................................
FY437458       <-- ..................................................
FY453828       <-- ..................................................
FY449475       <-- ..................................................
FY450320       <-- ..................................................
FY454652       <-- ..................................................
FY433135       <-- ..................................................
FY452341       <-- ..................................................
FY448265       <-- ..................................................
FD577312       <-- ..................................................
EX904026       <-- ..................................................
EY914989       <-- ..................................................
FY450851       <-- ..................................................
FD980451       <-- ..................................................
EY910922       --> CCTTATTGTCCTCGCATTTGAAGTCAGAAAATGTGAAGAAATTATTACAT
FD976329       --> CCTTATTGTCCTCGCATTTGAAGTCAGAAAATGTGAAGAAATTATTACAT
FD974496       --> .............................AATGTGAAGAAATTATTTCAT
EV543504       --> ...............................cGTGAAGAAATTATTTCAT
EW729313       --> ................................GTGAAGAAATTATTTCAT
EW739425       --> ................................GTGAAGAAATTATTTCAT
FY431361       --> ................................GTGAAGAA-TTATTTCAT
EW727976       --> ..................................GAAGAAATTATTTCAT
FD581638       --> ................................gcGAAAAAATTATTTCAT
FD943737       --> ..................................GAAGAAATTATTTCAT
FY444308       --> ..................................................
EW729395       --> ..................................................
FY431424       --> ..................................................

               51     -    101
UN22142        --> AGCTGGAGTTCTTTACATTAGAGCTACATGCAACTCACTCACTAGCAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443463       <-- AGCTGGAGTTCTTTACATTAGAGCTACATGCAACTCACTCACTAGCAGTA  Raphanus sativus cv GSK3-1
FY444479       <-- AGCTGGAGTTCTTTACATTAGAGCTACATGCAACTCACTCACTAGCAGTA  Raphanus sativus cv GSK3-1
FY444521       <-- AGCTGGAGTTCTTTACATTAGAGCTACATGCAACTCACTCACTAGCAGTA  Raphanus sativus cv GSK3-1
EV538262       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY437458       <-- ..................................................  Raphanus sativus cv GSK3-1
FY453828       <-- ..................................................  Raphanus sativus cv GSK3-1
FY449475       <-- ..................................................  Raphanus sativus cv GSK3-1
FY450320       <-- ..................................................  Raphanus sativus cv GSK3-1
FY454652       <-- ..................................................  Raphanus sativus cv GSK3-1
FY433135       <-- ..................................................  Raphanus sativus cv GSK3-1
FY452341       <-- ..................................................  Raphanus sativus cv GSK3-1
FY448265       <-- ..................................................  Raphanus sativus cv GSK3-1
FD577312       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX904026       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY914989       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY450851       <-- ..................................................  Raphanus sativus cv GSK3-1
FD980451       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY910922       --> AGCTGGAGTTCTTTACACTAGAGCTACATGCAACTCACTCACTAGCAGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976329       --> AGCTGGAGTTCTTTACACTAGAGCTACATGCAACTCACTCACTAGCAGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD974496       --> AGCTGGAGTTCTTTACATTAGAGCTACATGCAACTCACTCACTAGCAGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV543504       --> AGCTGGAGTTCTTTACATTAGAGCTACATGCAACTCACTCACTAGCAGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW729313       --> AGCTGGAGTTCTTTACATTAGAGCTACATGCAACTCACTCACTAGCAGTA  Raphanus sativus cv Early Scarlet Globe
EW739425       --> AGCTGGAGTTCTTTACATTAAAGCTACATGCAACTCACTCACTAGCAGTA  Raphanus sativus cv Rat-Tail Radish #3870
FY431361       --> AGCTGGAGTTCTTTACATTAGAGCTACATGCAACTCACTCACTAGCAGTA  Raphanus sativus cv GSK3-1
EW727976       --> AGCTGGAGTTCTTTACATTAGAGCTACATGCAACTCACTCACTAGCAGTA  Raphanus sativus cv Early Scarlet Globe
FD581638       --> AGCTGGAGTTCTTTACACTAGAGCTACATGCAACTCACTCACTAGCAGTA  Raphanus sativus cv Rat-Tail Radish #3870
FD943737       --> AGCTGGAGTTCTTTACATTAGAGCTACATGCAACTCACTCACTAGCAGTA  Raphanus sativus cv Early Scarlet Globe
FY444308       --> ...........................ATGCAACTCACTCACTAGCAGTA  Raphanus sativus cv GSK3-1
EW729395       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY431424       --> ..................................................  Raphanus sativus cv GSK3-1

               101    -    151
UN22142        --> ---ATACAGCATTTAAACAAACAAATAGGATTACAAGAGTACACATGTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443463       <-- GTAATACAGCATTTAAACAAACAAATAGGATTACAAGAGTACACATGTAA  Raphanus sativus cv GSK3-1
FY444479       <-- GTAATACAGCATTTAAACAAACAAATAGGATTACAAGAGTACACATGTAA  Raphanus sativus cv GSK3-1
FY444521       <-- GTAATACAGCATTTAAACAAACAAATAGGATTACAAGAGTACACATGTAA  Raphanus sativus cv GSK3-1
EV538262       <-- .............................................gtaAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY437458       <-- ..................................................  Raphanus sativus cv GSK3-1
FY453828       <-- ..................................................  Raphanus sativus cv GSK3-1
FY449475       <-- ..................................................  Raphanus sativus cv GSK3-1
FY450320       <-- ..................................................  Raphanus sativus cv GSK3-1
FY454652       <-- ..................................................  Raphanus sativus cv GSK3-1
FY433135       <-- ..................................................  Raphanus sativus cv GSK3-1
FY452341       <-- ..................................................  Raphanus sativus cv GSK3-1
FY448265       <-- ..................................................  Raphanus sativus cv GSK3-1
FD577312       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX904026       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY914989       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY450851       <-- ..................................................  Raphanus sativus cv GSK3-1
FD980451       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY910922       --> ---ATACAGCATTTAAACAAACAAATAGGATTACAGGGGTACACATGTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976329       --> ---ATACAGCATTTAAACAAACAAATAGGATTACAAGGGTACACATGTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD974496       --> ---ATACAGCACTTAAACAAACAAATAGGATTACAAGAGTACACATGTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV543504       --> ---ATACAGCACTTAAACAAACAAATAGGATTACAAGAGTACACATGTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW729313       --> ---ATACAGCACTTAAACAAACAAATAGGATTACAAGAGTACACATGTAA  Raphanus sativus cv Early Scarlet Globe
EW739425       --> ---ATACAGCACTTAAACAAACAAATAGGATTACAAGAGTACACATGTAA  Raphanus sativus cv Rat-Tail Radish #3870
FY431361       --> GTAATACAGCATTTAAACAAACAAATAGGATTACAAGAGTACACATGTAA  Raphanus sativus cv GSK3-1
EW727976       --> ---ATACAGCACTTAAACAAACAAATAGGATTACAAGAGTACACATGTAA  Raphanus sativus cv Early Scarlet Globe
FD581638       --> ---ATACAGCATTTAAACAAACAAATAGGATTACAAGGGTACACATGTAA  Raphanus sativus cv Rat-Tail Radish #3870
FD943737       --> ---ATACAGCACTTAAACAAACAAATAGGATTACAAGAGTACACATGTAA  Raphanus sativus cv Early Scarlet Globe
FY444308       --> GTAATACAGCATTTAAACAAACAAATAGGATTACAAGAGTACACATGTAA  Raphanus sativus cv GSK3-1
EW729395       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY431424       --> ..................................................  Raphanus sativus cv GSK3-1

               151    -    201
UN22142        --> AAAGTACATGAATAAAAGAA-CAGGTAAAGATACTAGGGGG-CAGCGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443463       <-- AAAGTACATGAATAAAAGAA-CATGTAAAAATACTAGGGGG-CAGCGATT  Raphanus sativus cv GSK3-1
FY444479       <-- AAAGTACATGAATAAAAGAA-CATGTAAAAATACTAGGGGG-CAGCGATT  Raphanus sativus cv GSK3-1
FY444521       <-- AAAGTACATGAATAAAAGAA-CATGTAAAAATACTAGGGGG-CAGCGATT  Raphanus sativus cv GSK3-1
EV538262       <-- AAAGTACATGAATAAAAGAAACAGGTAAAGATACTAGGGGGGCAGCGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY437458       <-- ..................................................  Raphanus sativus cv GSK3-1
FY453828       <-- ..................................................  Raphanus sativus cv GSK3-1
FY449475       <-- ..................................................  Raphanus sativus cv GSK3-1
FY450320       <-- ..................................................  Raphanus sativus cv GSK3-1
FY454652       <-- ..................................................  Raphanus sativus cv GSK3-1
FY433135       <-- ..................................................  Raphanus sativus cv GSK3-1
FY452341       <-- ..................................................  Raphanus sativus cv GSK3-1
FY448265       <-- ..................................................  Raphanus sativus cv GSK3-1
FD577312       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX904026       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY914989       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY450851       <-- ..................................................  Raphanus sativus cv GSK3-1
FD980451       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY910922       --> AAAGTACATGAATAAAAGAA-CAGGTAAAGATACTAGGGGGGCAGCGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976329       --> AAAGTACATGAATAAAAGAA-CAGGTAAAGATACTAGGGGGGCAGCGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD974496       --> AAAGTACATGAATAAAAGAA-CAGGTAAAGACACTAGGGGG-CAGCGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV543504       --> AAAGTACATGAATAAAAGAA-CAGGTAAAGACACTAGGGGG-CAGCGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW729313       --> AAAGTACATGAATAAAAGAA-CAGGTAAAGACACTAGGGGG-CAGCGATT  Raphanus sativus cv Early Scarlet Globe
EW739425       --> AAAGTACATGAATAAAAGAA-CAGGTAAAGACACTAGGGGG-CAGCGATT  Raphanus sativus cv Rat-Tail Radish #3870
FY431361       --> AAAGTACATGAATAAAAGAA-CATGTAAAAATACTAGGGGG-CAGCGATT  Raphanus sativus cv GSK3-1
EW727976       --> AAAGTACATGAATAAAAGAA-CAGGTAAAGACACTAGGGGG-CAGCGATT  Raphanus sativus cv Early Scarlet Globe
FD581638       --> AAAGTACATGAATAAAAAAA-CAGGTAAAGATACTAGGGGGGCAGCGATT  Raphanus sativus cv Rat-Tail Radish #3870
FD943737       --> AAAGTACATGAATAAAAGAA-CAGGTAAAGACACTAGGGGG-CAGCGATT  Raphanus sativus cv Early Scarlet Globe
FY444308       --> AAAGTACATGAATAAAAGAA-CATGTAAAAATACTAGGGGG-CAGCGATT  Raphanus sativus cv GSK3-1
EW729395       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY431424       --> ..................................................  Raphanus sativus cv GSK3-1

               201    -    251
UN22142        --> CGGATGGATAGTTTGGGTAAAATAAATGCCATTCATTCGGTTGCAGCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443463       <-- CGGATGGATATTTTGGGTAAAATACATGCCACTCATTCGGTTGCAGCTCT  Raphanus sativus cv GSK3-1
FY444479       <-- CGGATGGATATTTTGGGTAAAATACATGCCACTCATTCGGTTGCAGCTCT  Raphanus sativus cv GSK3-1
FY444521       <-- CGGATGGATATTTTGGGTAAAATACATGCCACTCATTCGGTTGCAGCTCT  Raphanus sativus cv GSK3-1
EV538262       <-- CGGATGGAAAGTTTGGGTAAAATAAATGCCATTCATTCGGTTGCAGCTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY437458       <-- ..................................................  Raphanus sativus cv GSK3-1
FY453828       <-- ..................................................  Raphanus sativus cv GSK3-1
FY449475       <-- ..................................................  Raphanus sativus cv GSK3-1
FY450320       <-- ..................................................  Raphanus sativus cv GSK3-1
FY454652       <-- ..................................................  Raphanus sativus cv GSK3-1
FY433135       <-- ..................................................  Raphanus sativus cv GSK3-1
FY452341       <-- ..................................................  Raphanus sativus cv GSK3-1
FY448265       <-- ..................................................  Raphanus sativus cv GSK3-1
FD577312       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX904026       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY914989       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY450851       <-- ..................................................  Raphanus sativus cv GSK3-1
FD980451       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY910922       --> CGGATGGATAGTTTGGGTAAAATAAATGCCATTCATTCGGTTGCAGCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976329       --> CGGATGGATAGTTTGGGTAAAATAAATGCCATTCATTCGGTTGCAGCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD974496       --> CGGATGGATAGTTTGGGTAAAATAAATGCCATTCATTCGGTTGCAGCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV543504       --> CGGATGGATAGTTTGGGTAAAATAAATGCCATTCATTCGGTTGCAGCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW729313       --> CGGATGGATAGTTTGGGTAAAATAAATGCCATTCATTCGGTTGCAGCTCT  Raphanus sativus cv Early Scarlet Globe
EW739425       --> CGGATGGATAGTTTGGGTAAAATAAATGCCATTCATTCGGTTGCAGCTCT  Raphanus sativus cv Rat-Tail Radish #3870
FY431361       --> CGGATGGATATTTTGGGTAAAATACATGCCACTCATTCGGTTGCAGCTCT  Raphanus sativus cv GSK3-1
EW727976       --> CGGATGGATAGTTTGGGTAAAATAAATGCCATTCATTCGGTTGCAGCTCT  Raphanus sativus cv Early Scarlet Globe
FD581638       --> CGGATGGATAGTTTGGGTAAAATAAATGCCATTCATTCGGTTGCAGCTCT  Raphanus sativus cv Rat-Tail Radish #3870
FD943737       --> CGGATGGATAGTTTGGGTAAAATAAATGCCATTCATTCGGTTGCAGCTCT  Raphanus sativus cv Early Scarlet Globe
FY444308       --> CGGATGGATATTTTGGGTAAAATACATGCCACTCATTCGGTTGCAGCTCT  Raphanus sativus cv GSK3-1
EW729395       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY431424       --> ..................................................  Raphanus sativus cv GSK3-1

               251    -    301
UN22142        --> TCTAAGCATATGTAGGATTGAGTGCAATGGCTTCCCTGTAGATCATCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443463       <-- TCTAAGCATATGTAGGATTGAGTGCAATGGCTTCCCTGTAGATCATCTCT
FY444479       <-- TCTAAGCATATGTAGGATTGAGTGCAATGGCTTCCCTGTAGATCATCTCT
FY444521       <-- TCTAAGCATATGTAGGATTGAGTGCAATGGCTTCCCTGTAGATCATCTCT
EV538262       <-- TCTAAGCATATGTTGGATTGAGTGCAATGGCTTCCCTGTAGATCATCTCT
FY437458       <-- ..................................................
FY453828       <-- ..................................................
FY449475       <-- ..................................................
FY450320       <-- ..................................................
FY454652       <-- ..................................................
FY433135       <-- ..................................................
FY452341       <-- ..................................................
FY448265       <-- ..................................................
FD577312       <-- ..................................................
EX904026       <-- ..................................................
EY914989       <-- ..................................................
FY450851       <-- ..................................................
FD980451       <-- ..................................................
EY910922       --> TCTAAGCATATGTAGGATTGAGTGCAATGGCTTCCCTGTAGATCATCTCT
FD976329       --> TCTAAGCATATGTAGGATTGAGTGCAATAGCTTCCCTGTAGATCATCTCT
FD974496       --> TCTAAGCATATGTAGGATTGAGTGCAATGGCTTCCCTGTAGATCATCTCT
EV543504       --> TCTAAGCATATGTAGGATTGAGTGCAATGGCTTCCCTGTAGATCATCTCT
EW729313       --> TCTAAGCATATGTAGGATTGAGTGCAATGGCTTCCCTGTAGATCATCTCT
EW739425       --> TCTAAGCATATGTAGGATTGAGTGCAATGGCTTCCCTGTAGATCATCTCT
FY431361       --> TCTAAGCATATGTAGGATTGAGTGCAATGGCTTCCCTGTAGATCATCTCT
EW727976       --> TCTAAGCATATGTAGGATTGAGTGCAATGGCTTCCCTGTAAATCATCTCT
FD581638       --> ACTAAGCATATGTTGGATTGAGTGCAATGGCTTCCCTGTAGATCATCTCT
FD943737       --> TCTAAGCATATGTAGGATTGAGTGCAATGGCTTCCCTGTAGATCATCTCT
FY444308       --> TCTAAGCATATGTAGGATTGAGTGCAATGGCTTCCCTGTAGATCATCTCT
EW729395       --> ..............................................CTCT
FY431424       --> ..................................................

               301    -    351
UN22142        --> TTTATCTGTTCCTCATCTAGAGGTTGTTGTTCAAAGTCGAAAGAGAATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443463       <-- TTTATCTGTTCCTCATCTAGAGGTTGTTGTTCAAAGTCGAAAGAGAATGG  Raphanus sativus cv GSK3-1
FY444479       <-- TTTATCTGTTCCTCATCTAGAGGTTGTTGTTCAAAGTCGAAAGAGAATGG  Raphanus sativus cv GSK3-1
FY444521       <-- TTTATCTGTTCCTCATCTAGAGGTTGTTGTTCAAAGTCGAAAGAGAATGG  Raphanus sativus cv GSK3-1
EV538262       <-- TTTATCTGTTCCTCATCTAGAGGTTGTTGTTCAAAGTCGAAAGAGAATGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY437458       <-- ..................................................  Raphanus sativus cv GSK3-1
FY453828       <-- ..................................................  Raphanus sativus cv GSK3-1
FY449475       <-- ..................................................  Raphanus sativus cv GSK3-1
FY450320       <-- ..................................................  Raphanus sativus cv GSK3-1
FY454652       <-- ..................................................  Raphanus sativus cv GSK3-1
FY433135       <-- ..................................................  Raphanus sativus cv GSK3-1
FY452341       <-- ..................................................  Raphanus sativus cv GSK3-1
FY448265       <-- ..................................................  Raphanus sativus cv GSK3-1
FD577312       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX904026       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY914989       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY450851       <-- ..................................................  Raphanus sativus cv GSK3-1
FD980451       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY910922       --> TTTATCTGTTCCTCATCTAGAGGTTGTTGTTCAAAGTCGAAAGAGAATGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976329       --> TTTATCTGTTCCTCATCTAGAGGTTGTTGTTCAAAGTCGAAAGAGAATGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD974496       --> TTTATCTGTTCCTCATCTAGAGGTTGTTGTTCAAAGTCGAAAGAAAATGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV543504       --> TTTATCTGTTCCTCATCTAGAGGTTGTTGTTCAAAGTCGAAAGAGAATGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW729313       --> TTTATCTGTTCCTCATCTAGAGGTTGTTGTTCAAAGTCGAAAGAAAATGG  Raphanus sativus cv Early Scarlet Globe
EW739425       --> TTTATCTGTTCCTCATCTAAAGGTTGTTGTTCAAAGTCCAAAGAAAATGG  Raphanus sativus cv Rat-Tail Radish #3870
FY431361       --> TTTATCTGTTCCTCATCTAGAGGTTGTTGTTCAAAGTCGAAAGAGAATGG  Raphanus sativus cv GSK3-1
EW727976       --> TTTATCTGTTCCTCATCTAGAGGTTGTTGTTCAAAGTCGAAAGAAAATGG  Raphanus sativus cv Early Scarlet Globe
FD581638       --> TTTATCTGTTCCTCATCTAGAGGTTGTTGTTCGAAGTCGAAAGAAAATGG  Raphanus sativus cv Rat-Tail Radish #3870
FD943737       --> TTTATCTGTTCCTCATCTAGAGGTTGTTGTTCAAAGTCGAAAGAAAATGG  Raphanus sativus cv Early Scarlet Globe
FY444308       --> TTTATCTGTTCCTCATCTAGAGGTTGTTGTTCAAAGTCGAAAGAGAATGG  Raphanus sativus cv GSK3-1
EW729395       --> TTTATCTGTTCCTCATCTAGAGGTTGTTGTTCAAAGTCCAAAGAAAATGG  Raphanus sativus cv Early Scarlet Globe
FY431424       --> ..................................................  Raphanus sativus cv GSK3-1

               351    -    401
UN22142        --> CTTTAGA-CAGATTGGCTCATCATTTGGGTCGTGCAACTTGGCAAGGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443463       <-- CTTTAGA-CAGATTGGCTCATCATTTGGGTCGTGCAACTTGGCAAGGTAC
FY444479       <-- CTTTAGAGCAGATTGGCTCATCATTTGGGTCGTGCAAC............
FY444521       <-- CTTTAGA-CAGATTGGCTCATCATTTGGGTCGTGCAAC............
EV538262       <-- CTTTAGA-CAGATTGGCTCATCATTTGGGTCGTGCAACTTGGCAAGGTAC
FY437458       <-- ..................................................
FY453828       <-- ..................................................
FY449475       <-- ..................................................
FY450320       <-- ..................................................
FY454652       <-- ..................................................
FY433135       <-- ..................................................
FY452341       <-- ..................................................
FY448265       <-- ..................................................
FD577312       <-- ..................................................
EX904026       <-- ..................................................
EY914989       <-- ..................................................
FY450851       <-- ..................................................
FD980451       <-- ..................................................
EY910922       --> CTTTAGA-CAGATTGGCTCATCATTTGGGTCGTGCAACTTGGCAAGGTAT
FD976329       --> CTTTAGA-CAGATTGGCTCATCATTTGGGTCGTGCAACTTGGCAAGGTAT
FD974496       --> CTTTAGA-CAGATTGGCTCATCATTTGGGTCGTGCAACTTGGCAAGGTAC
EV543504       --> CTTTAGA-CAGATTGGCTCATCATTTGGGTCGTGCAACTTGGCAAGGTAC
EW729313       --> CTTTAGA-CAGATTGGCTCATCATTTGGGTCGTGCAACTTGGCAAGGTAC
EW739425       --> CTTTAGA-CAGATTGGCTCATCATTTGGGTCGTGCAACTTGGCAAGGTAC
FY431361       --> CTTTAGA-CAGATTGGCTCATCATTTGGGTCGTGCAACTTGGCAAGGTAC
EW727976       --> CTTTAGA-CAGATTGGCTCATCATTTGGGTCGTGCAACTTGGCAAGGTAC
FD581638       --> CTTTAGA-CAGATTGGCTCATCATTTGGGTCGTGCAACTTGGCAAGGTAG
FD943737       --> CTTTAGA-CAGATTGGCTCATCATTTGGGTCGTGCAACTTGGCAAGGTAC
FY444308       --> CTTTAGA-CAGATTGGCTCATCATTTGGGTCGTGCAACTTGGCAAGGTAC
EW729395       --> CTTTAGA-CAGATTGGCTCATCATTTGGGTCGTGCAACTTGGCAAGGTAC
FY431424       --> ..................................................

               401    -    451
UN22142        --> GGGTGGTTCAAAGCTTCTTCAACAGTGATTCTTTTGTTGGGGTCAAAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443463       <-- GGGTGGTTCAGAGCTTCTTCAACAGTGATTCTTTTGTTGGGGTCAAAAGT
FY444479       <-- ..................................................
FY444521       <-- ..................................................
EV538262       <-- GGGTGATTCAGAGCTTCTTCAACAGTGATTCTTTTGTTGGGGTCAAAAGT
FY437458       <-- .......................................GGGTCAAAAGT
FY453828       <-- ..............................................AAGT
FY449475       <-- ..................................................
FY450320       <-- ..................................................
FY454652       <-- ..................................................
FY433135       <-- ..................................................
FY452341       <-- ..................................................
FY448265       <-- ..................................................
FD577312       <-- ..................................................
EX904026       <-- ..................................................
EY914989       <-- ..................................................
FY450851       <-- ..................................................
FD980451       <-- ..................................................
EY910922       --> GGGTGGTTCAAAGCTTCTTCAACAGTGATTCTTTTGTTGGGGTCAAAAGT
FD976329       --> GGGTGGTTCAGAGCTTCTTCAACAGTGATTCTTTTGTTGGGGTCAAAAGT
FD974496       --> GGGTGGTTCAAAGCTTCTTCAACAGTGATTCTTTTGTTGGGGTCAAAAGT
EV543504       --> GGGTGGTTCAAAGCTTCTTCAACAGTGATTCTTTTGTTGGGGTCAAAAGT
EW729313       --> GGGTGGTTCAAAACTTCTTCAACAGTGATTCTTTTGTTGGGGTCAAAAGT
EW739425       --> GGGTGGTTCAAAACTTCTTCAACAGTGATTCTTTTGTTGGGGTCAAAAGT
FY431361       --> GGGTGGTTCAGAGCTTCTTCAACAGTGATTCTTTTGTTGGGGTCAAAAGT
EW727976       --> GGGTGGTTCAAAGCTTCTTCAACAGTGATTCTTTTGTTGGGGTTAAAAGT
FD581638       --> GGGTGGTTCAAAACTTCTTCAACAGTGATTCTTTTGTTGGGGTCAAAAGT
FD943737       --> GGGTGGTTCAGAGCTTCTTCAACAGTGATTCTTTTGTTGGGGTCAAAAGT
FY444308       --> GGGTGGTTCAGAGCTTCTTCAACAGTGATTCTTTTGTTGGGGTCAAAAGT
EW729395       --> GGGTGGTTCAAAACTTCTTCAACAGTGATTCTTTTGTTGGGGTCAAAAGT
FY431424       --> ..................................................

               451    -    501
UN22142        --> CAACATTCTGTCAACAAGATCAATGGCCAATGGGTTAACATGAGAGAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443463       <-- CAACATTCTGTCAACAAGATCAATGGCCAATGGGTTAACATGAGAGAAAA
FY444479       <-- ..................................................
FY444521       <-- ..................................................
EV538262       <-- CAACATTCTGTCAACTAGATCAATGGCCAATGGGTTAACATGAGAGAAAA
FY437458       <-- CAACATTCTGTCAACAAGATCAATGGCCAATGGGTTAACATGAGAGAAAA
FY453828       <-- CAACATTCTGTCAACAAGATCAATGGCCAATGGGTTAACATGAGAGAAAA
FY449475       <-- ..................................................
FY450320       <-- ..................................................
FY454652       <-- ..................................................
FY433135       <-- ..................................................
FY452341       <-- ..................................................
FY448265       <-- ..................................................
FD577312       <-- ..................................................
EX904026       <-- ..................................................
EY914989       <-- ..................................................
FY450851       <-- ..................................................
FD980451       <-- ..................................................
EY910922       --> CAACATTCTGTCAACAAGATCAATGGCCAATGGGTTAACATGAGAGAAAA
FD976329       --> CAACATTCTGTCAACAAGATCAATGGCCAATGGGTTAACATGAGAGAAAA
FD974496       --> CAACATTCTGTCAACAAGATCAATGGCCAATGGGTTAACATGAGAAAAAA
EV543504       --> CAACATTCTGTCAACAAGATCAATGGCCAATGGGTTAACATGAGAGAAAA
EW729313       --> CAACATTCTGTCAACAAGATCAATGGCCAATGGGTTAACATGAG......
EW739425       --> CAACATTCTGTCAACAAGATCAATGGCCAATGGGTTAACATGAAAAAAAA
FY431361       --> CAACATTCTGTCAACAAGATCAATGGCCAATGGGTTAACATGAGAGAAAA
EW727976       --> CAACATTCTGTCAACAAGATCAATGGCCAATGGGTTAACATGAGAGAAAA
FD581638       --> CAACATTCTGTCAACAAGATCAATGGCCAATGGGTTAACATGAAAAAAAG
FD943737       --> CAACATTCTGTCAACAAGATCAATGGTCAATGGGTTAACATGAGAGAAAA
FY444308       --> CAACATTCTGTCAACAAGATCAATGGCCAATGGGTTAACATGAGAGAAAA
EW729395       --> CAACATTCTGTCAACAAGATCAATGGCCAATGGGTTAACATGAG......
FY431424       --> ..................................................

               501    -    551
UN22142        --> GTTTAGCTAACGGCTGGCGAGGGAAGGTGGGGAGTTGCCGGATGTATCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443463       <-- GTT-AGCTAACGG.....................................
FY444479       <-- ..................................................
FY444521       <-- ..................................................
EV538262       <-- GTTTAGCTAACGGCTGGCGAGGGAAGGTGGGGAGTTGCCGGATGTATCTT
FY437458       <-- GTTTAGCTAACGGCTGGCGAGGGAAGGTGGGGAGTTGCCGGATGTATCTT
FY453828       <-- GTTTAGCTAACGGCTGGCGAGGGAAGGTGGGGAGTTGCCGGATGTATCTT
FY449475       <-- ..................................................
FY450320       <-- ..................................................
FY454652       <-- ..................................................
FY433135       <-- ..................................................
FY452341       <-- ..................................................
FY448265       <-- ..................................................
FD577312       <-- ..................................................
EX904026       <-- ..................................................
EY914989       <-- ..................................................
FY450851       <-- ..................................................
FD980451       <-- ..................................................
EY910922       --> GTTTAGCTAACGGCTGGCGAGGGAAGGTGGGGAGTTGCCGGGTGTATCTT
FD976329       --> GTTTAGCTAACGGCTGGCGAGGGAAGGGGGGGAGTTGCCGGATGTATCTT
FD974496       --> GTTTAGCTAACGGCTGGCGAGGGAAGGTGGGGAGCTGCCGGATGTATCTT
EV543504       --> GTTTAGCTAACGGCTGGCGAGGGAAGGTGGGGAGCTGCCGGATGTATCTT
EW729313       --> ..................................................
EW739425       --> GTTTAACTAACGGCTGGCGAGGGAAGGTGGGGAGCTGCCGGATGTATCTT
FY431361       --> GTTTAGCTAACGGCTGGCGAGGGAAGGTGGGGAGTTGCCGGATGTATCTT
EW727976       --> GTTTAGCTAACGGCTGGCGAGGGAAGGTGGGGAGCTGCCGGATGTATCTT
FD581638       --> GTTTAGCTAACGGCTGGCGAGGGAAGGTGGGAAGTTGCCGGATGTATCTT
FD943737       --> GTTTAGCTAACGGCTGGCGAGGGAA.........................
FY444308       --> GTTTAGCTAACGGCTGGCGAGGGAAGGTGGGGAGTTGCCGGATGTATCTT
EW729395       --> ..................................................
FY431424       --> ..................................................

               551    -    601
UN22142        --> TTAGCATCCTCGTTGTGTGTAAACCCGAGATCTGATTCTGTCGGCGTGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443463       <-- ..................................................
FY444479       <-- ..................................................
FY444521       <-- ..................................................
EV538262       <-- TTCGCATCCTCGTTGTGTGTAAACCCGAGATCTGATTCTGTCGGCGTGCC
FY437458       <-- TTAGCATCCTCGTTGTGTGTAAACCCGAGATCTGATTCTGTCGGCGTGCC
FY453828       <-- TTAGCATCCTCGTTGTGTGTAAACCCGAGATCTGATTCTGTCGGCGTGCC
FY449475       <-- ..........CGTTGTGTGTAAACCCGAGATCTGATTCTGTCGGCGTGCC
FY450320       <-- .........................................CGGCGTGCC
FY454652       <-- .........................................CGGCGTGCC
FY433135       <-- ..................................................
FY452341       <-- ..................................................
FY448265       <-- ..................................................
FD577312       <-- ..................................................
EX904026       <-- ..................................................
EY914989       <-- ..................................................
FY450851       <-- ..................................................
FD980451       <-- ..................................................
EY910922       --> TTCGCATCCTCGTTGTGTGTAAACCCGAGATCTGATTCTGTCGGCGTGCC
FD976329       --> TTCGCATCCTCGTTGTGTGTAAACCCGAGATCTGATTCTGTCGGCGTGCC
FD974496       --> TTAGCATCCTCGTTGTGTGTAAACCCGAAATCTGATTCTGTCGGCGTGCC
EV543504       --> TTAGCATCCTCGTTGTGTGTAAACCCGAGATCTGATTCTGTCGGCGTGCC
EW729313       --> ..................................................
EW739425       --> TTAACATCCTCGTTGTGTGTAAACCCGAAATCTGATTCTGTCGGCGTGC.
FY431361       --> TTAGCATCCTCGTTGTGTGTAAACCCGAGATCTGATTCTGTCGGCGTGCC
EW727976       --> TTAGCATCCTCGTTGTGTGTAAACCCGAGATCTGATTCTGTCGGCGTGCC
FD581638       --> TTCGCATCCTCGTTGTGCGTAAACCCGAGATCTGATTCTGTCGGCGTGCC
FD943737       --> ..................................................
FY444308       --> TTAGCATCCTCGTTGTGTGTAAACCCGAGATCTGATTCTGTCGGCGTGCC
EW729395       --> ..................................................
FY431424       --> .....ATCCTCGTTGTGTGTAA-CCCGAGATCTGATTCTGTCGGCGTGCC

               601    -    651
UN22142        --> AAGCAACTCTGTCAATAAGCGCATCTGATGGACATGGTCTTTACCAGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443463       <-- ..................................................
FY444479       <-- ..................................................
FY444521       <-- ..................................................
EV538262       <-- AAGCAACTCTGTCAATAAGCGCATCTGATGGACATGGTCTTTACCAGGGA
FY437458       <-- AAGCAACTCTGTCAATAAGCGCATCTGATGGACATGGTCTTTACCAGGGA
FY453828       <-- AAGCAACTCTGTCAATAAGCGCATCTGATGGACATGGTCTTTACCAGGGA
FY449475       <-- AAGCAACTCTGTCAATAAGCGCATCTGATGGACATGGTCTTTACCAGGGA
FY450320       <-- AAGCAACTCTGTCAATAAGCGCATCTGATGGACATGGTCTTTACCAGGGA
FY454652       <-- AAGCAACTCTGTCAATAAGCGCATCTGATGGACATGGTCTTTACCAGGGA
FY433135       <-- .AGCAACTCTGTCAATAAGCGCATCTGATGGACATGGTCTTTACCAGGGA
FY452341       <-- .AGCAACTCTGTCAATAAGCGCATCTGATGGACATGGTCTTTACCAGGGA
FY448265       <-- ..................................................
FD577312       <-- ..................................................
EX904026       <-- ..................................................
EY914989       <-- ..................................................
FY450851       <-- ..................................................
FD980451       <-- ..................................................
EY910922       --> AAGCAACTCTGTCAATAAGCGCATCTGATGGACATGGTCTTTACCAGGGA
FD976329       --> AAGCAACTCTGTCAATAAGCGCATCTGATGGACATGGTCTTTACCAGGGA
FD974496       --> AAGCAACTCTGTCAATAAGCGCATCTGATGGACATGGTCTTTACCAGGGA
EV543504       --> AAGCAACTCTGTCAATAAGCGCATCTGATGGACATGGTCTTTACCAGGGA
EW729313       --> ..................................................
EW739425       --> ..................................................
FY431361       --> AAGCAACTCTGTCAATAAGCGCATCTGATGGACATGGTCTTTACCAGGGA
EW727976       --> AAGCAACTCTGTCAATAAGAGCATCTGATGGACATGGTCTTTACCAGGGA
FD581638       --> AAGCAACTCTGTCAATAAGCGCATCTGATGGACATGGTCTTTACCAGGGA
FD943737       --> ..................................................
FY444308       --> AAGCAACTCTGTCAATAAGCGCATCTGATGGACATGGTCTTTACCAGGGA
EW729395       --> ..................................................
FY431424       --> AAGCAACTCTGTCAATAAGCGCATCTGATGGACATGGTCTTTACCAGGGA

               651    -    701
UN22142        --> ACAAAGGCTTTCTGTTCATGAGCTCCATAAAGATACAACCAACAGACCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443463       <-- ..................................................
FY444479       <-- ..................................................
FY444521       <-- ..................................................
EV538262       <-- ACAAAGGCTTTCTGTTCATGAGCTCCATAAAGATACAACCAACAGACCAA
FY437458       <-- ACAAAGGCTTTCTGTTCATGAGCTCCATAAAGATACAACCAACAGACCAA
FY453828       <-- ACAAAGGCTTTCTGTTCATGAGCTCCATAAAGATACAACCAACAGACCAA
FY449475       <-- ACAAAGGCTTTCTGTTCATGAGCTCCATAAAGATACAACCAACAGACCAA
FY450320       <-- ACAAAGGCTTTCTGTTCATGAGCTCCATAAAGATACAACCAACAGACCAA
FY454652       <-- ACAAAGGCTTTCTGTTCATGAGCTCCATAAAGATACAACCAACAGACCAA
FY433135       <-- ACAAAGGCTTTCTGTTCATGAGCTCCATAAAGATACAACCAACAGACCAA
FY452341       <-- ACAAAGGCTTTCTGTTCATGAGCTCCATAAAGATACAACCAACAGACCAA
FY448265       <-- ....AGGCTTTCTGTTCATGAGCTCCATAAAGATACAACCAACAGACCAA
FD577312       <-- ..................................................
EX904026       <-- ..................................................
EY914989       <-- ..................................................
FY450851       <-- ..................................................
FD980451       <-- ..................................................
EY910922       --> ATAAAGGCTTTC----CATGAGCTCCATAAAGATACAACCAACAGACCAA
FD976329       --> ATAAAGGCTTTCTGTTCATGAGCTCCATAAAGATACAACCAACAGACCAA
FD974496       --> ACAAAGGCTTTCTGTTCATGAGCTCCATAAAGATACAACCAACAGACCAA
EV543504       --> ACAAAGGCTTTCTGTTCATGAGCTCCATAAAGATACAACCAACAGACCAA
EW729313       --> ..................................................
EW739425       --> ..................................................
FY431361       --> ACAAAGGCTTTCTGTTCATGAGCTCCATAAAGATACAACCAACAGACCAA
EW727976       --> ACAAAGGCTTTCTGTTCATGAGCTCCATAAAGATACAACCAACAGACCAA
FD581638       --> ACAGAGGCTTTCTGTTCATGAGCTCCATAAAGATACAACCAACAGACCAA
FD943737       --> ..................................................
FY444308       --> ACAAAGGCTTTCTGTTCATGAGCTCCATAAAGATACAACCAACAGACCAA
EW729395       --> ..................................................
FY431424       --> ACAAAGGCTTTCTGTTCATGAGCTCCATAAAGATACAACCAACAGACCAA

               701    -    751
UN22142        --> ACATCTATAGCAGCAGTGTAATCCGATGAGTTCAACAGAAGCTCAGGTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443463       <-- ..................................................
FY444479       <-- ..................................................
FY444521       <-- ..................................................
EV538262       <-- ACATCTATAGCAGCTGTGTAATCGGATGAGTTCAAAAGAAGCTCAGGTGC
FY437458       <-- ACATCTATAGCAGCAGTGTAATCCGATGAGTTCAACAGAAGCTCAGGTGC
FY453828       <-- ACATCTATAGCAGCAGTGTAATCCGATGAGTTCAACAGAAGCTCAGGTGC
FY449475       <-- ACATCTATAGCAGCAGTGTAATCCGATGAGTTCAACAGAAGCTCAGGTGC
FY450320       <-- ACATCTATAGCAGCAGTGTAATCCGATGAGTTCAACAGAAGCTCAGGTGC
FY454652       <-- ACATCTATAGCAGCAGTGTAATCCGATGAGTTCAACAGAAGCTCAGGTGC
FY433135       <-- ACATCTATAGCAGCAGTGTAATCCGATGAGTTCAACAGAAGCTCAGGTGC
FY452341       <-- ACATCTATAGCAGCAGTGTAATCCGATGAGTTCAACAGAAGCTCAGGTGC
FY448265       <-- ACATCTATAGCAGCAGTGTAATCCGATGAGTTCAACAGAAGCTCAGGTGC
FD577312       <-- .....TATAGCAGCAGTGTA-TCCGATGAGTTCAACAGAAGCTCAGGTGC
EX904026       <-- .............................................GGTGC
EY914989       <-- ...............................................TGC
FY450851       <-- ..................................................
FD980451       <-- ..................................................
EY910922       --> ACATCTATAGCAGCAGTGTAATCCGATGAGTTCAACAGAAGC........
FD976329       --> ACATCTATAGCAGCAGTGTAATCCGATGAGTTCAACAGAAGCTCAG-TGC
FD974496       --> ACATCTATAGCAGCAGTGTAATCCGATGAGTCCAACAGAAGCTCAGGTGC
EV543504       --> ACATCTATAGCAGCAGTGTAATCCGATGAGTTCAACAGAAGCTCAGGTGC
EW729313       --> ..................................................
EW739425       --> ..................................................
FY431361       --> ACATCTATAGCAGCAGTGTAATCCGATGAGTTCAACAGAAGCTCAGGTGC
EW727976       --> ACATCTATAGCAGCAGTGTAATCCGATGAGTTCAACAGAAGCTCAGGTGC
FD581638       --> ACATCTATAGCAGCAGTGTAATCCGATGAGTTCAACAGAAGCT.......
FD943737       --> ..................................................
FY444308       --> ACATCTATAGCAGCAGTGTAATCCGATGAGTTCAACAGAAGCTCAGGTGC
EW729395       --> ..................................................
FY431424       --> ACATCTATAGCAGCAGTGTAATCCGATGAGTTCAACAGAAGCTCAGGTGC

               751    -    801
UN22142        --> TCTGTACCATCTGGTAACAACATACTCGGTCATAAACTCGTTCTCTGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443463       <-- ..................................................  Raphanus sativus cv GSK3-1
FY444479       <-- ..................................................  Raphanus sativus cv GSK3-1
FY444521       <-- ..................................................  Raphanus sativus cv GSK3-1
EV538262       <-- TCTATACCATCTGGTAACAACATACTCGGTCACAAACTCGTTCTCCGAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY437458       <-- TCTGTACCATCTGGTAACAACATACTCGGTCATAAACTCGTTCTCTGAAG  Raphanus sativus cv GSK3-1
FY453828       <-- TCTGTACCATCTGGTAACAACATACTCGGTCATAAACTCGTTCTCTGAAG  Raphanus sativus cv GSK3-1
FY449475       <-- TCTGTACCATCTGGTAACAACATACTCGGTCATAAACTCGTTCTCTGAAG  Raphanus sativus cv GSK3-1
FY450320       <-- TCTGTACCATCTGGTAACAACATACTCGGTCATAAACTCGTTCTCTGAAG  Raphanus sativus cv GSK3-1
FY454652       <-- TCTGTACCATCTGGTAACAACATACTCGGTCATAAACTCGTTCTCTGAAG  Raphanus sativus cv GSK3-1
FY433135       <-- TCTGTACCATCTGGTAACAACATACTCGGTCATAAACTCGTTCTCTGAAG  Raphanus sativus cv GSK3-1
FY452341       <-- TCTGTACCATCTGGTAACAACATACTCGGTCATAAACTCGTTCTCTGAAG  Raphanus sativus cv GSK3-1
FY448265       <-- TCTGTACCATCTGGTAACAACATACTCGGTCATAAACTCGTTCTCTGAAG  Raphanus sativus cv GSK3-1
FD577312       <-- TCTATACCATCTGGTAACAACATACTCGGTCATAAACTCGTTCTCCGAAG  Raphanus sativus cv Rat-Tail Radish #3870
EX904026       <-- TCTGTACCATCTGGTAACAACATACTCGGTCATAAACTCGTTCTCTGAAG  Raphanus sativus cv Rat-Tail Radish #3870
EY914989       <-- TCTGTACCATCTG-TAACAACATACTCGGTCATAAACTCGTTCTCCGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY450851       <-- .........................................TCTCTGAAG  Raphanus sativus cv GSK3-1
FD980451       <-- ..........................................tctcGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY910922       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976329       --> TCTGTACCATCTGGTAACAACATAC.........................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD974496       --> TCTGTACCATCTGGTAACAACATACTCGGTCATAAACTCGTTCTCCGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV543504       --> TCTGTACCATCTGGTAACAACATACTCGGTCATAAACTCGTTCTCCGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW729313       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW739425       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY431361       --> TCTGTACCATCTGGTAACAACATACTCGGTCATAAACTCGTTCTCTGAAG  Raphanus sativus cv GSK3-1
EW727976       --> TCTGTACCATCTGGTAACAACATACTCGGTCATAAACTCGTTCTCCGAAG  Raphanus sativus cv Early Scarlet Globe
FD581638       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD943737       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY444308       --> TCTGTACCATCTGGTAACAACATACTCGGTCATAAACTCGTTCTCTGAAG  Raphanus sativus cv GSK3-1
EW729395       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY431424       --> TCTGTACCATCTGGTAACAACATACTCGGTCATAAACTCGTTCTCTGAAG  Raphanus sativus cv GSK3-1

               801    -    851
UN22142        --> TCGGTCGAGCAAGACCGAAGTCACAGATCTTTAAATCGCAGTTGGCGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443463       <-- ..................................................
FY444479       <-- ..................................................
FY444521       <-- ..................................................
EV538262       <-- TCGGTCGAGCAAGACCGAAGTCACAGATCTTTAAATCGCAGTTGGCGTTC
FY437458       <-- TCGGTCGAGCAAGACCGAAGTCACAGATCTTTAAATCGCAGTTGGCGTTC
FY453828       <-- TCGGTCGAGCAAGACCGAAGTCACAGATCTTTAAATCGCAGTTGGCGTTC
FY449475       <-- TCGGTCGAGCAAGACCGAAGTCACAGATCTTTAAATCGCAGTTGGCGTTC
FY450320       <-- TCGGTCGAGCAAGACCGAAGTCACAGATCTTTAAATCGCAGTTGGCGTTC
FY454652       <-- TCGGTCGAGCAAGACCGAAGTCACAGATCTTTAAATCGCAGTTGGCGTTC
FY433135       <-- TCGGTCGAGCAAGACCGAAGTCACAGATCTTTAAATCGCAGTTGGCGTTC
FY452341       <-- TCGGTCGAGCAAGACCGAAGTCACAGATCTTTAAATCGCAGTTGGCGTTC
FY448265       <-- TCGGTCGAGCAAGACCGAAGTCACAGATCTTTAAATCGCAGTTGGCGTTC
FD577312       <-- TCGGTCGAGCAAGACCGAAGTCACAGATCTTTAAATCGCAGTTGGCATTC
EX904026       <-- TCGGTCGAGCAAGACCGAAGTCACAGATCTTTAAATCGCAGTTGGCGTTC
EY914989       <-- TCGGACGAGCAAGACCGAAGTCACAGATCTTTAAATCGCAGTTGGCGTTC
FY450851       <-- TCGGTCGAGCAAGACCGAAGTCACAGATCTTTAAATCGCAGTTGGCGTTC
FD980451       <-- TCGGACGAGCAAGAC-GAAGTCACAGATCTTTAAATCGCAGTTGGCGTTC
EY910922       --> ..................................................
FD976329       --> ..................................................
FD974496       --> TCGGTCGAGCAAGACCGAAGTCACAGATCTTTAAATCGCAGTTCGCG...
EV543504       --> TCGGTCGA..........................................
EW729313       --> ..................................................
EW739425       --> ..................................................
FY431361       --> TCGGTCGA..........................................
EW727976       --> TCGGTCGAGCAAGACCGAAGTCACAGATCTTTAA................
FD581638       --> ..................................................
FD943737       --> ..................................................
FY444308       --> TCGGTCGAGCAAGACCGAAGTCACAGATCTTTAAATCGCAGTTGGCGTTC
EW729395       --> ..................................................
FY431424       --> TCGGTCGAGCAAGACCGAAGTCACAGATCTTTAAATCGCAGTTGGCGTTC

               851    -    901
UN22142        --> AGGAGAAGATTGCTCGGTTTTAGATCCCTGTGGA-TAACTTTAGCCGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443463       <-- ..................................................
FY444479       <-- ..................................................
FY444521       <-- ..................................................
EV538262       <-- AGGAGAAGATTGCTCGGTTTTAGATCTCTGTGGA-TAACTTTAGCCGAGT
FY437458       <-- AGGAGAAGATTGCTCGGTTTTAGATCCCTGTGGA-TAACTTTAGCCGAGT
FY453828       <-- AGGAGAAGATTGCTCGGTTTTAGATCCCTGTGGA-TAACTTTAGCCGAGT
FY449475       <-- AGGAGAAGATTGCTCGGTTTTAGATCCCTGTGGA-TAACTTTAGCCGAGT
FY450320       <-- AGGAGAAGATTGCTCGGTTTTAGATCCCTGTGGA-TAACTTTAGCCGAGT
FY454652       <-- AGGAGAAGATTGCTCGGTTTTAGATCCCTGTGGA-TAACTTTAGCCGAGT
FY433135       <-- AGGAGAAGATTGCTCGGTTTTAGATCCCTGTGGA-TAACTTTAGCCGAGT
FY452341       <-- AGGAGAAGATTGCTCGGTTTTAGATCCCTGTGGA-TAACTTTAGCCGAGT
FY448265       <-- AGGAGAAGATTGCTCGGTTTTAGATCCCTGTGGA-TAACTTTAGCCGAGT
FD577312       <-- AGGAGAAGATTGCTCGGTTTTAGATCCCTGTGGA-TAACTTTAGCCGAGT
EX904026       <-- AGGAGAAGATTGCTCGGTTTTAGATCCCTGTGGA-TAACTTTAGCCGAGT
EY914989       <-- AGGAGAAGATTGCTCGGTTTTAGATCCCTGTGGA-TAACTTTAGCCGAGT
FY450851       <-- AGGAGAAGATTGCTCGGTTTTAGATCCCTGTGGAATAACTTTAGCCGAGT
FD980451       <-- AGGAGAAGATTGCTCGGTTTTAGATCCCTGTGGA-TAACTTTAGCCGAGT
EY910922       --> ..................................................
FD976329       --> ..................................................
FD974496       --> ..................................................
EV543504       --> ..................................................
EW729313       --> ..................................................
EW739425       --> ..................................................
FY431361       --> ..................................................
EW727976       --> ..................................................
FD581638       --> ..................................................
FD943737       --> ..................................................
FY444308       --> AGGAGAAGATTGCTCGGTTTTAGATCCCTGTGGA-TAACTTTAGCCGAGT
EW729395       --> ..................................................
FY431424       --> AGGAGAAGATTGCTCGGTTTTAGATCCCTGTGGA-TAACTTTAGCCGAGT

               901    -    951
UN22142        --> GGATGTACTTGAGCCCTCGAAGAAGCTGGTACAAGAAGTACTGACAGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443463       <-- ..................................................
FY444479       <-- ..................................................
FY444521       <-- ..................................................
EV538262       <-- GGATGTGCTTGAGCCCc.................................
FY437458       <-- GGATGTACTTGAGCCCTCGAAGAAGCTGGTACAAGAAGTACTGACAGTGT
FY453828       <-- GGATGTACTTGAGCCCTCGAAGAAGCTGGTACAAGAAGTACTGACAGTGT
FY449475       <-- GGATGTACTTGAGCCCTCGAAGAAGCTGGTACAAGAAGTACTGACAGTGT
FY450320       <-- GGATGTACTTGAGCCCTCGAAGAAGCTGGTACAAGAAGTACTGACAGTGT
FY454652       <-- GGATGTACTTGAGCCCTCGAAGAAGCTGGTACAAGAAGTACTGACAGTGT
FY433135       <-- GGATGTACTTGAGCCCTCGAAGAAGCTGGTACAAGAAGTACTGACAGTGT
FY452341       <-- GGATGTACTTGAGCCCTCGAAGAAGCTGGTACAAGAAGTACTGACAGTGT
FY448265       <-- GGATGTACTTGAGCCCTCGAAGAAGCTGGTACAAGAAGTACTGACAGTGT
FD577312       <-- GGATGTACTTGAGCCCTCGAAGAAGCTGGTACAAGAAGTACTGACAGTGT
EX904026       <-- GGATGTACTTGAGCCCTCGAAGAAGCTGGTACAAGAAGTACTGACAGTGT
EY914989       <-- GGATGTACTTGAGCCCTCGAAGAAGCTGGTACAAGAAGTACTGACAGTGT
FY450851       <-- GGATGTACTTGAGCCCTCGAAGAAGCTGGTACAAGAAGTACTGACAGTGT
FD980451       <-- GGATGTACTTGAGCCCTCGAAGAAGCTGGTACAAGAAGTACTGACAGTGT
EY910922       --> ..................................................
FD976329       --> ..................................................
FD974496       --> ..................................................
EV543504       --> ..................................................
EW729313       --> ..................................................
EW739425       --> ..................................................
FY431361       --> ..................................................
EW727976       --> ..................................................
FD581638       --> ..................................................
FD943737       --> ..................................................
FY444308       --> GGATGTACT.........................................
EW729395       --> ..................................................
FY431424       --> GGATGTACTTGAGCCCTCGAAGAAGCTGGTACAAGAAGTACTGACAGTGT

               951    -   1001
UN22142        --> TCCTCAGACAAACCCTGGTTGGATCTGATGATTTGATGAAGATCAGTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443463       <-- ..................................................
FY444479       <-- ..................................................
FY444521       <-- ..................................................
EV538262       <-- ..................................................
FY437458       <-- TCCTCAGACAAACCCTGGTTGGATCTGATGATTTGATGAAGATCAGTGTC
FY453828       <-- TCCTCAGACAAACCCTGGTTGGATCTGATGATTTGATGAAGATCAGTGTC
FY449475       <-- TCCTCAGACAAACCCTGGTTGGATCTGATGATTTGATGAAGATCAGTGTC
FY450320       <-- TCCTCAGACAAACCCTGGTTGGATCTGATGATTTGATGAAGATCAGTGTC
FY454652       <-- TCCTCAGACAAACCCTGGTTGGATCTGATGATTTGATGAAGATCAGTGTC
FY433135       <-- TCCTCAGACAAACCCTGGTTGGATCTGATGATTTGATGAAGATCAGTGTC
FY452341       <-- TCCTCAGACAAACCCTGGTTGGATCTGATGATTTGATGAAGATCAGTGTC
FY448265       <-- TCCTCAGACAAACCCTGGTTGGATCTGATGATTTGATGAAGATCAGTGTC
FD577312       <-- TCCTCAGACAAACCCTGGTTGGATCTGATGATTTGATGAAGATCAGTGTC
EX904026       <-- TCCTCAGACAAACCCTGGTTGGATCTGATGATTTGATGAAGATCAGTGTC
EY914989       <-- TCCTCAGACAAACCCTGGTTGGATCTGATGATTTGATGAAGATCGGTGTC
FY450851       <-- TCCTCAGACAAACCCTGGTTGGATCTGATGATTTGATGAAGATCAGTGTC
FD980451       <-- TCCTCAGACAAACCCTGGTTGGATCTGATGATTTGATGAAGATCAGTGTC
EY910922       --> ..................................................
FD976329       --> ..................................................
FD974496       --> ..................................................
EV543504       --> ..................................................
EW729313       --> ..................................................
EW739425       --> ..................................................
FY431361       --> ..................................................
EW727976       --> ..................................................
FD581638       --> ..................................................
FD943737       --> ..................................................
FY444308       --> ..................................................
EW729395       --> ..................................................
FY431424       --> TCCTCAGACAAACCCTGGTTGGATCTGATGATTTGATGAAGATCAGTGTC

               1001   -   1051
UN22142        --> CATTAACTCAGTGGCAATATAAACATCACTGAACTGTCTTCTAAGTGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443463       <-- ..................................................
FY444479       <-- ..................................................
FY444521       <-- ..................................................
EV538262       <-- ..................................................
FY437458       <-- CATTAACTCAGTGGCAATATAAACATCACTGAACTGTCTTCTAAGTGGTG
FY453828       <-- CATTAACTCAGTGGCAATATAAACATCACTGAACTGTCTTCTAAGTGGTG
FY449475       <-- CATTAACTCAGTGGCAATATAAACATCACTGAACTGTCTTCTAAGTGGTG
FY450320       <-- CATTAACTCAGTGGCAATATAAACATCACTGAACTGTCTTCTAAGTGGTG
FY454652       <-- CATTAACTCAGTGGCAATATAAACATCACTGAACTGTCTTCTAAGTGGTG
FY433135       <-- CATTAACTCAGTGGCAATATAAACATCACTGAACTGTCTTCTAAGTGGTG
FY452341       <-- CATTAACTCAGTGGCAATATAAACATCACTGAACTGTCTTCTAAGTGGTG
FY448265       <-- CATTAACTCAGTGGCAATATAAACATCACTGAACTGTCTTCTAAGTGGTG
FD577312       <-- CATTAACTCAGTGGCAATATAAACATCACTGAACTGTCTTCTAAGTGGTG
EX904026       <-- CATTAACTCAGTGGCAATATAAACATCACTGAACTGTCTTCTAAGTGGTG
EY914989       <-- CATTAACTCAGTGGCAATATAAACATCACTGAACTGTCTTCTAAGTGGTG
FY450851       <-- CATTAACTCAGTGGCAATATAAACATCACTGAACTGTCTTCTAAGTGGTG
FD980451       <-- CATTAACTCAGTGGCAATATAAACATCACTGAACTGTCTTCTAAGTGGTG
EY910922       --> ..................................................
FD976329       --> ..................................................
FD974496       --> ..................................................
EV543504       --> ..................................................
EW729313       --> ..................................................
EW739425       --> ..................................................
FY431361       --> ..................................................
EW727976       --> ..................................................
FD581638       --> ..................................................
FD943737       --> ..................................................
FY444308       --> ..................................................
EW729395       --> ..................................................
FY431424       --> CATTAACTCAGTGGCAATATAAACATCACTGAACTGTCTTCTAAGTGGTG

               1051   -   1101
UN22142        --> GAGGAACCACATCTCTTATAGCTATGATGTTTTCATGATCGAGATGACGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443463       <-- ..................................................
FY444479       <-- ..................................................
FY444521       <-- ..................................................
EV538262       <-- ..................................................
FY437458       <-- GAGGAACCACATCTCTTATAGCTATGATGTTTTCATGATCGAGATGACGA
FY453828       <-- GAGGAACCACATCTCTTATAGCTATGATGTTTTCATGATCGAGATGACGA
FY449475       <-- GAGGAACCACATCTCTTATAGCTATGATGTTTTCATGATCGAGATGACGA
FY450320       <-- GAGGAACCACATCTCTTATAGCTATGATGTTTTCATGATCGAGATGACGA
FY454652       <-- GAGGAACCACATCTCTTATAGCTATGATGTTTTCATGATCGAGATGACGA
FY433135       <-- GAGGAACCACATCTCTTATAGCTATGATGTTTTCATGATCGAGATGACGA
FY452341       <-- GAGGAACCACATCTCTTATAGCTATGATGTTTTCATGATCGAGATGACGA
FY448265       <-- GAGGAACCACATCTCTTATAGCTATGATGTTTTCATGATCGAGATGACGA
FD577312       <-- GAGGAACCACATCTCTTATAGCTATGATGTTTTCATGATCGAGATGACGA
EX904026       <-- GAGGAACCACATCTCTTATAGCTATGATGTTTTCATGATCGAGATGACGA
EY914989       <-- GAGGAACCACATCTCTTATAGCTATGATGTTTTCATGATCGAGATGACGA
FY450851       <-- GAGGAACCACATCTCTTATAGCTATGATGTTTTCATGATCGAGATGACGA
FD980451       <-- GAGGAACCACATCTCTTATAGCTATGATGTTTTCATGATCGAGATGACGA
EY910922       --> ..................................................
FD976329       --> ..................................................
FD974496       --> ..................................................
EV543504       --> ..................................................
EW729313       --> ..................................................
EW739425       --> ..................................................
FY431361       --> ..................................................
EW727976       --> ..................................................
FD581638       --> ..................................................
FD943737       --> ..................................................
FY444308       --> ..................................................
EW729395       --> ..................................................
FY431424       --> GAGGAACC..........................................

               1101   -   1151
UN22142        --> AGGAGCTTGATCTCGCGAAGTGTACGCTTGGCGTCCATGTGATTATCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443463       <-- ..................................................
FY444479       <-- ..................................................
FY444521       <-- ..................................................
EV538262       <-- ..................................................
FY437458       <-- AGGAGCTTGATCTCGCGAAGTGTACGCTTGGCGTCCATGTGATTATCAAA
FY453828       <-- AGGAGCTTGATCTCGCGAAGTGTACGCTTGGCGTCCATGTGATTATCAAA
FY449475       <-- AGGAGCTTGATCTCGCGAAGTGTACGCTTGGCGTCCATGTGATTATCAAA
FY450320       <-- AGGAGCTTGATCTCGCGAAGTGTACGCTTGGCGTCCATGTGATTATCAAA
FY454652       <-- AGGAGCTTGATCTCGCGAAGTGTACGCTTGGCGTCCATGTGATTATCAAA
FY433135       <-- AGGAGCTTGATCTCGCGAAGTGTACGCTTGGCGTCCATGTGATTATCAAA
FY452341       <-- AGGAGCTTGATCTCGCGAAGTGTACGCTTGGCGTCCATGTGATTATCAAA
FY448265       <-- AGGAGCTTGATCTCGCGAAGTGTACGCTTGGCGTCCATGTGATTATCAAA
FD577312       <-- AGAAGCTTGATCTCGCGAAGTGTACGCTTGGCGTCCATGTGATTATCAAA
EX904026       <-- AGGAGCTTGATCTCGCGAAGTGTACGCTTGGCGTCCATGTGATTATCAAA
EY914989       <-- AGAAGCTTGATCTCGCGAAGTGTACGCTTGGCGTCCATGTGATTATCAAA
FY450851       <-- AGGAGCTTGATCTCGCGAAGTGTACGCTTGGCGTCCATGTGATTATCAAA
FD980451       <-- AGAAGCTTGATCTCGCGAAGCGTACGCTTGGCGTCCATGTGATTATCAAA
EY910922       --> ..................................................
FD976329       --> ..................................................
FD974496       --> ..................................................
EV543504       --> ..................................................
EW729313       --> ..................................................
EW739425       --> ..................................................
FY431361       --> ..................................................
EW727976       --> ..................................................
FD581638       --> ..................................................
FD943737       --> ..................................................
FY444308       --> ..................................................
EW729395       --> ..................................................
FY431424       --> ..................................................

               1151   -   1201
UN22142        --> GGCGTTGGCTATCTTCTTCATCGCCACTAGCTCGTTCGTCTCCGAATCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443463       <-- ..................................................
FY444479       <-- ..................................................
FY444521       <-- ..................................................
EV538262       <-- ..................................................
FY437458       <-- GGCGTTGGCTATCTTCTTCATCGCCACTAGCTCGTTCGTCTCCGAATCCA
FY453828       <-- GGCGTTGGCTATCTTCTTCATCGCCACTAGCTCGTTCGTCTCCGAATCCA
FY449475       <-- GGCGTTGGCTATCTTCTTCATCGCCACTAGCTCGTTCGTCTCCGAATCCA
FY450320       <-- GGCGTTGGCTATCTTCTTCATCGCCACTAGCTCGTTCGTCTCCGAATCCA
FY454652       <-- GGCGTTGGCTATCTTCTTCATCGCCACTAGCTCGTTCGTCTCCGAATCCA
FY433135       <-- GGCGTTGGCTATCTTCTTCATCGCCACTAGCTCGTTCGTCTCCGAATCCA
FY452341       <-- GGCGTTGGCTATCTTCTTCATCGCCACTAGCTCGTTCGTCTCCGAATCCA
FY448265       <-- GGCGTTGGCTATCTTCTTCATCGCCACTAGCTCGTTCGTCTCCGAATCCA
FD577312       <-- AGCGTTGGCTATCTTCTTCATCGCCACTAGCTCGTTCGTCTCCGAATCCA
EX904026       <-- GGCGTTGGCTATCTTCTTCATCGCCACTAGCTCGTTCGTCTCCGAATCCA
EY914989       <-- GGCGTTGGCTATCTTCTTCATCGCCACTAGCTCGTTCGTCTCCGAATCCA
FY450851       <-- GGCGTTGGCTATCTTCTTCATCGCCACTAGCTCGTTCGTCTCCGAATCCA
FD980451       <-- GGCGTTGGCTATCTTCTTCATCGCCACTAGCTCGTTCGTCTCCGAATCCA
EY910922       --> ..................................................
FD976329       --> ..................................................
FD974496       --> ..................................................
EV543504       --> ..................................................
EW729313       --> ..................................................
EW739425       --> ..................................................
FY431361       --> ..................................................
EW727976       --> ..................................................
FD581638       --> ..................................................
FD943737       --> ..................................................
FY444308       --> ..................................................
EW729395       --> ..................................................
FY431424       --> ..................................................

               1201   -   1251
UN22142        --> AAACAGAGCAAACGATGCCGTATGCGCCTCGACCGATTGGTACAATCGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443463       <-- ..................................................
FY444479       <-- ..................................................
FY444521       <-- ..................................................
EV538262       <-- ..................................................
FY437458       <-- AAACAGAGCAAACGATGCCGTATGCGCCTCGACCGATTGGTACAATCGGA
FY453828       <-- AAACAGAGCAAACGATGCCGTATGCGCCTCGACCGATTGGTACAATCGGA
FY449475       <-- AAACAGAGCAAACGATGCCGTATGCGCCTCGACCGATTGGTACAATCGGA
FY450320       <-- AAACAGAGCAAACGATGCCGTATGCGCCTCGACCGATTGGTACAATCGGA
FY454652       <-- AAACAGAGCAAACGATGCCGTATGCGCCTCGACCGATTGGTACAATCGGA
FY433135       <-- AAACAGAGCAAACGATGCCGTATGCGCCTCGACCGATTGGTACAATCGGA
FY452341       <-- AAACAGAGCAAACGATGCCGTATGCGCCTCGACCGATTGGTACAATCGGA
FY448265       <-- AAACAGAGCAAACGATGCCGTATGCGCCTCGACCGATTGGTACAATCGGA
FD577312       <-- AAACAGAGCAAACGATGCCGTATGCGCCTCGACCGATTGGTACAATCGGA
EX904026       <-- AAACAGAGCAAACGATGCCGTATGCGCCTCG-CCGATTGGTACAATCGGA
EY914989       <-- AAACAGAGCAAACGATGCCGTATGCGCCTCGACCGATTGGTACAATCGGA
FY450851       <-- AAACAGAGCAAACGATGCCGTATGCGCCTCGACCGATTGGTACAATCGGA
FD980451       <-- AAACAGAGCAAACGATGCCGTATGCGCCTCGACCGATTGGTACAATCGGA
EY910922       --> ..................................................
FD976329       --> ..................................................
FD974496       --> ..................................................
EV543504       --> ..................................................
EW729313       --> ..................................................
EW739425       --> ..................................................
FY431361       --> ..................................................
EW727976       --> ..................................................
FD581638       --> ..................................................
FD943737       --> ..................................................
FY444308       --> ..................................................
EW729395       --> ..................................................
FY431424       --> ..................................................

               1251   -   1301
UN22142        --> GGACGGTACTTGGATGTGATCTCGAATAAACTACCGAAGATATCATAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443463       <-- ..................................................
FY444479       <-- ..................................................
FY444521       <-- ..................................................
EV538262       <-- ..................................................
FY437458       <-- GGACGGTAC.........................................
FY453828       <-- GGACGGTACTTGGATGTGATCTCGAATAAACTACCGAAGATATCATAGCT
FY449475       <-- GGACGGTACTTGGATGTGATCTCGAATAAACTACCGAAGATATCATAGCT
FY450320       <-- GGACGGTACTTGGATGTGATCTCGAATAAACTACCGAAGATATCATAGCT
FY454652       <-- GGACGGTACTTGGATGTGATCTCGAATAAACTACCGAAGATATCATAGCT
FY433135       <-- GGACGGTACTTGGATGTGATCTCGAATAAACTACCGAAGATATCATAGCT
FY452341       <-- GGACGGTACTTGGATGTGATCTCGAATAAACTACCGAAGATATCATAGCT
FY448265       <-- GGACGGTACTTGGATGTGATCTCGAATAAACTACCGAAGATATCATAGCT
FD577312       <-- GGACGGTACTTGGATGTGATCTCGAATAAACTACCGAAGATATCATAGCT
EX904026       <-- GGACGGTACTTGGATGTGATCTCGAATAAACTACCGAAGATATCATAGCT
EY914989       <-- GGACGGTACTTGGATGTGATCTCGAATAAACTACCGAAGATATCATAGCT
FY450851       <-- GGACGGTACTTGGATGTGATCTCGAATAAACTACCGAAGATATCATAGCT
FD980451       <-- GGACGGTACTTGGATGTGATCTCGAATAAACTACCGAAGACATCATAGCT
EY910922       --> ..................................................
FD976329       --> ..................................................
FD974496       --> ..................................................
EV543504       --> ..................................................
EW729313       --> ..................................................
EW739425       --> ..................................................
FY431361       --> ..................................................
EW727976       --> ..................................................
FD581638       --> ..................................................
FD943737       --> ..................................................
FY444308       --> ..................................................
EW729395       --> ..................................................
FY431424       --> ..................................................

               1301   -   1351
UN22142        --> TATGAACTGTCCTCCGTGCGTTTGCACCGCCGGGAACTCTGGATATTGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443463       <-- ..................................................
FY444479       <-- ..................................................
FY444521       <-- ..................................................
EV538262       <-- ..................................................
FY437458       <-- ..................................................
FY453828       <-- TATGAA............................................
FY449475       <-- TATGAACTGTCCTCCGTGCGTTTGCACCGCCGGGAACTCTGGATATTGGC
FY450320       <-- TATGAACTGTCCTCCGTGCGTTTGCACCGCCGGGAACTCTGGATATTGGC
FY454652       <-- TATGAACTGTCCTCCGTGCGTTTGCACCGCCGGGAACTCTGGATATTGGC
FY433135       <-- TATGAACTGTCCTCCGTGCGTTTGCACCGCCGGGAACTCTGGATATTGGC
FY452341       <-- TATGAACTGTCCTCCGTGCGTTTGCACCGCCGGGAACTCTGGATATTGGC
FY448265       <-- TATGAACTGTCCTCCGTGCGTTTGCACCGCCGGGAACTCTGGATATTGGC
FD577312       <-- TATGAACTGTCCTCCGTGCGTTTGCACCGCCGGAAACTCTGGATATTGGC
EX904026       <-- TATGAACTGTCCTCCGTGCGTTTGCACCGCCGGGAACTCTGGATATTGGC
EY914989       <-- TATGAACTGTCCTCCGTGCGTTTGCACCGCCGGGAACTATGGATATTGGC
FY450851       <-- TATGAACTGTCCTCCGTGCGTTTGCACCGCCGGGAACTCTGGATATTGGC
FD980451       <-- TATGAACTGTCCTCCGTGCGTTTGCACCGCCGGGAACTCTGGATATTGGC
EY910922       --> ..................................................
FD976329       --> ..................................................
FD974496       --> ..................................................
EV543504       --> ..................................................
EW729313       --> ..................................................
EW739425       --> ..................................................
FY431361       --> ..................................................
EW727976       --> ..................................................
FD581638       --> ..................................................
FD943737       --> ..................................................
FY444308       --> ..................................................
EW729395       --> ..................................................
FY431424       --> ..................................................

               1351   -   1401
UN22142        --> CGCCGGCGTTATTCATCTCTCTCTCTCTAAATCGATCGATTGATCACGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443463       <-- ..................................................
FY444479       <-- ..................................................
FY444521       <-- ..................................................
EV538262       <-- ..................................................
FY437458       <-- ..................................................
FY453828       <-- ..................................................
FY449475       <-- CGCCGGCGTTATTCATCTCTCTCTCTCTAAATCGATCGATTGATCACGCG
FY450320       <-- CGCCGGCGTTATTCATCTCTCTCTCTCTAAATCGATCGATTGATCACGCG
FY454652       <-- CGCCGGCGTTATTCATCTCTCTCTCTCTAAATCGATCGATTGATCACGCG
FY433135       <-- CGCCGGCGTTATTCATCTCTCTCTCTCTAAATCGATCGATTGATCACGCG
FY452341       <-- CGCCGGCGTTATTCATCTCTCTCTCTCTAAATCGATCGATTGATCACGCG
FY448265       <-- CGCCGGCGTTATTCATCTCTCTCTCTCTAAATCGATCGATTGATCACGCG
FD577312       <-- CGCCGGCGTTGTTCATCTCTCTCTCTCTAA--------ATCGATCACGCG
EX904026       <-- CGCCGGCGTTATTCATCTCTCTCTC--TAAATCGATCGATTGATCACGCG
EY914989       <-- CGCCGGCGTTGTTCATC------TCTCTAAATCGATCGATCGATCACGCG
FY450851       <-- CGCCGGCGTTATTCATCTCTCTCTCTCTAAATCGATCGATTGATCACGCG
FD980451       <-- CGCCGGCGTTGTTCATC------TCTCTAAATCGATCGATCGATCACGCG
EY910922       --> ..................................................
FD976329       --> ..................................................
FD974496       --> ..................................................
EV543504       --> ..................................................
EW729313       --> ..................................................
EW739425       --> ..................................................
FY431361       --> ..................................................
EW727976       --> ..................................................
FD581638       --> ..................................................
FD943737       --> ..................................................
FY444308       --> ..................................................
EW729395       --> ..................................................
FY431424       --> ..................................................

               1401   -   1451
UN22142        --> CTTAAGTCAACTTCAAAGCTTTGACTCTGTTGTTGTGCTTTGAGAGGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443463       <-- ..................................................
FY444479       <-- ..................................................
FY444521       <-- ..................................................
EV538262       <-- ..................................................
FY437458       <-- ..................................................
FY453828       <-- ..................................................
FY449475       <-- CTTAAGTCAACTTCAAAGCT..............................
FY450320       <-- CTTAAGTCAACTTCAAAGCT..............................
FY454652       <-- CTTAAGTCAACTTCAAAGCT..............................
FY433135       <-- CTTAAGTCAACTTCAAAGCTTTGACTCTGTTGTTGTGCTTga........
FY452341       <-- CTTAAGTCAACT-CAAAGC...............................
FY448265       <-- CTTAAGTCAACTTCAAAGCTTTGACTCTGT....................
FD577312       <-- CTT-AGTCAACTTC-AAGCTTTGACTCTGTTGTgctttg...........
EX904026       <-- CTTAAGTCAACTTCAAAGCTTTGACTCTGTTGTTGTGCTTTGA.......
EY914989       <-- CTTA-GTCAACTTCAAAGCTTTGACTCTGTTGTTGTGCTTTGAGAGGTGG
FY450851       <-- CTTAAGTCAACTTCAAAGCTTTGACTCTGTTG..................
FD980451       <-- CTTA-GTCAACTTCAAAGCTTTGACTCTGTTGTTGTGCTTTGAGAGGTGG
EY910922       --> ..................................................
FD976329       --> ..................................................
FD974496       --> ..................................................
EV543504       --> ..................................................
EW729313       --> ..................................................
EW739425       --> ..................................................
FY431361       --> ..................................................
EW727976       --> ..................................................
FD581638       --> ..................................................
FD943737       --> ..................................................
FY444308       --> ..................................................
EW729395       --> ..................................................
FY431424       --> ..................................................

               1451   -   1501
UN22142        --> TGTAGTGAATCTCTGAGGGTGGTGTGTGACTCGGTTTATATATAATATAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443463       <-- ..................................................
FY444479       <-- ..................................................
FY444521       <-- ..................................................
EV538262       <-- ..................................................
FY437458       <-- ..................................................
FY453828       <-- ..................................................
FY449475       <-- ..................................................
FY450320       <-- ..................................................
FY454652       <-- ..................................................
FY433135       <-- ..................................................
FY452341       <-- ..................................................
FY448265       <-- ..................................................
FD577312       <-- ..................................................
EX904026       <-- ..................................................
EY914989       <-- TGCAGTGAATCTCTGAGGGTGGTGTGTGACTCGGTTTATATATAATATAG
FY450851       <-- ..................................................
FD980451       <-- TGTAGTGAATCTCTGAGGGTGGTGTGTGACTCGGTTTATATATAATATAG
EY910922       --> ..................................................
FD976329       --> ..................................................
FD974496       --> ..................................................
EV543504       --> ..................................................
EW729313       --> ..................................................
EW739425       --> ..................................................
FY431361       --> ..................................................
EW727976       --> ..................................................
FD581638       --> ..................................................
FD943737       --> ..................................................
FY444308       --> ..................................................
EW729395       --> ..................................................
FY431424       --> ..................................................

               1501   -   1551
UN22142        --> TACACTTAGATTGAGAGACTGAAATGAGTTTTAGATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443463       <-- ......................................
FY444479       <-- ......................................
FY444521       <-- ......................................
EV538262       <-- ......................................
FY437458       <-- ......................................
FY453828       <-- ......................................
FY449475       <-- ......................................
FY450320       <-- ......................................
FY454652       <-- ......................................
FY433135       <-- ......................................
FY452341       <-- ......................................
FY448265       <-- ......................................
FD577312       <-- ......................................
EX904026       <-- ......................................
EY914989       <-- TACACTTAGATTGAGAGACTGAAATGAGTTTTAGATCC
FY450851       <-- ......................................
FD980451       <-- TACACTTAGATTGAGAGACTGAAATGAGTTTTAGATCC
EY910922       --> ......................................
FD976329       --> ......................................
FD974496       --> ......................................
EV543504       --> ......................................
EW729313       --> ......................................
EW739425       --> ......................................
FY431361       --> ......................................
EW727976       --> ......................................
FD581638       --> ......................................
FD943737       --> ......................................
FY444308       --> ......................................
EW729395       --> ......................................
FY431424       --> ......................................