RadishBase

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Alignment for radish unigene UN22154

               1      -     51
UN22154        --> CTATTTGCAATGGTCGGTGGCTGCTCCTCTCTGTCTTATTCTTCTTCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435891       <-- ..................................................
EV530094       <-- ..................................................
EV542003       <-- ..................................................
EX892507       <-- ..................................................
EY912398       <-- ..................................................
FD976152       <-- ..................................................
FY428349       --> CTATTTGCAATGGTCGGTGGCTGCTCCTCTCTGTCTTATTCTTCTTCTTC
FD563605       --> ..................................................
FY431580       --> ..................................................
FY453676       --> ..................................................
EV525304       --> ..................................................
FY452888       --> ..................................................
EV537848       --> ..................................................
EW717156       --> ..................................................

               51     -    101
UN22154        --> CACTTTCATTGCCACTACTGCTTTGTCTTCTTCCCCCCTTAATCTCTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435891       <-- ..................................................
EV530094       <-- ..................................................
EV542003       <-- ..................................................
EX892507       <-- ..................................................
EY912398       <-- ..................................................
FD976152       <-- ..................................................
FY428349       --> CACTTTCATTGCCACTACTGCTTTGTCTTCTTCCCCCCTTAATCTCTTTC
FD563605       --> ..................................................
FY431580       --> ..................................................
FY453676       --> ..................................................
EV525304       --> ..................................................
FY452888       --> ..................................................
EV537848       --> ..................................................
EW717156       --> ..................................................

               101    -    151
UN22154        --> CAAGAAGCTTCCTTATCCAGTCCCCTTTAAATCCGAGAAAGCCTGCACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435891       <-- ..................................................
EV530094       <-- ..................................................
EV542003       <-- ..................................................
EX892507       <-- ..................................................
EY912398       <-- ..................................................
FD976152       <-- ..................................................
FY428349       --> CAAGAAGCTTCCTTATCCAGTCCCCTTTAAATCCGAGAAAGCCTGCACCT
FD563605       --> ..................................................
FY431580       --> ..................................................
FY453676       --> ..................................................
EV525304       --> ..................................................
FY452888       --> ..................................................
EV537848       --> ..................................................
EW717156       --> ..................................................

               151    -    201
UN22154        --> TTAAGGTGCGTGAGCTCACTAACGATGGAATCACCGAAACCCATTCTCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435891       <-- ..................................................
EV530094       <-- ..................................................
EV542003       <-- ..................................................
EX892507       <-- ..................................................
EY912398       <-- ..................................................
FD976152       <-- ..................................................
FY428349       --> TTAAGGTGCGTGAGCTCACTAACGATGGAATCACCGAAACCCATTCTCGA
FD563605       --> ..............CTCACTAACGATGGAATCACCGAAACCCATTCTCGA
FY431580       --> ............................................TCTCGA
FY453676       --> ..................................................
EV525304       --> ..................................................
FY452888       --> ..................................................
EV537848       --> ..................................................
EW717156       --> ..................................................

               201    -    251
UN22154        --> TTTCGAAAAGCTCGATGATGGGTTTGTTCAGAAACTGGTCTACGATGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435891       <-- ..................................................
EV530094       <-- ..................................................
EV542003       <-- ..................................................
EX892507       <-- ..................................................
EY912398       <-- ..................................................
FD976152       <-- ..................................................
FY428349       --> TTTCGAAAAGCTCGATGATGGGTTTGTTCAGAAACTGGTCTACGATGCTC
FD563605       --> TTTCGAAAAGTTCGACGATGGGTTTGTTCAGAAACTGGTCTACGATGCTC
FY431580       --> TTTCGAAA-GCTCGATGATGGGTTTGTTCAGAAACTGGTCTACGATGCTC
FY453676       --> .........GCTCGATGATGGGTTTGTTCAGAAACTGGTCTACGATGCTC
EV525304       --> ..................................................
FY452888       --> ..................................................
EV537848       --> ..................................................
EW717156       --> ..................................................

               251    -    301
UN22154        --> TCGTTTGGTCTTCCCTTCACGGCCTTGTCGTCGGTGACAAAACTCATCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435891       <-- ..................................................
EV530094       <-- ..................................................
EV542003       <-- ..................................................
EX892507       <-- ..................................................
EY912398       <-- ..................................................
FD976152       <-- ..................................................
FY428349       --> TCGTTTGGTCTTCCCTTCACGGCCTTGTCGTCGGTGACAAAACTCATCAG
FD563605       --> TCGTTTGGTCTTCCCTTCACGGCCTTGTCGTCGGTGACAAAACTCATCAG
FY431580       --> TCGTTTGGTCTTCCCTTCACGGCCTTGTCGTCGGTGACAAAACTCATCAG
FY453676       --> TCGTTTGGTCTTCCCTTCACGGCCTTGTCGTCGGTGACAAAACTCATCAG
EV525304       --> ..................................................
FY452888       --> ..................................................
EV537848       --> ..................................................
EW717156       --> ..................................................

               301    -    351
UN22154        --> AAATCAGGAACAGTTCCAGGGGTTGGGATGATGCACGCCCCCATTGCATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435891       <-- ..................................................
EV530094       <-- ..................................................
EV542003       <-- ..................................................
EX892507       <-- ..................................................
EY912398       <-- ..................................................
FD976152       <-- ..................................................
FY428349       --> AAATCAGGAACAGTTCCAGGGGTTGGGATGATGCACGCCCCCATTGCATT
FD563605       --> AAATCAGGAACGGTTCCAGGGGTTGGGATGATGCACGCCCCTATTGCATT
FY431580       --> AAATCAGGAACAGTTCCAGGGGTTGGGATGATGCACGCCCCCATTGCATT
FY453676       --> AAATCAGGAACAGTTCCAGGGGTTGGGATGATGCACGCCCCCATTGCATT
EV525304       --> ..................................................
FY452888       --> ..................................................
EV537848       --> ..................................................
EW717156       --> ..................................................

               351    -    401
UN22154        --> GCTACCGACTCCATTCCCTGAAAGTTACTGGAACCAAGCTTGTGAAGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435891       <-- ..................................................
EV530094       <-- ..................................................
EV542003       <-- ..................................................
EX892507       <-- ..................................................
EY912398       <-- ..................................................
FD976152       <-- ..................................................
FY428349       --> GCTACCGACTCCATTCCCTGAAAGTTACTGGAACCAAGCTTGTGAAGTTG
FD563605       --> GCTACCGACTCCATTCCCTGAAAGTTACTGGAACCAAGCTTGTGAAGTTG
FY431580       --> GCTACCGACTCCATTCCCTGAAAGTTACTGGAACCAAGCTTGTGAAGTTG
FY453676       --> GCTACCGACTCCATTCCCTGAAAGTTACTGGAACCAAGCTTGTGAAGTTG
EV525304       --> ..................................................
FY452888       --> ..................................................
EV537848       --> ..................................................
EW717156       --> ..................................................

               401    -    451
UN22154        --> CTCCCATCTTCAACGAGTTGGTTGATCGGATCAGCTTGGATGGCAAATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435891       <-- ..................................................
EV530094       <-- ..................................................
EV542003       <-- ..................................................
EX892507       <-- ..................................................
EY912398       <-- ..................................................
FD976152       <-- ..................................................
FY428349       --> CTCCCATCTTCAACGAGTTGGTTGATCGGATCAGCTTGGATGGCAAATTC
FD563605       --> CTCCCATCTTCAACGAGTTAGTTGATCGTATCAGCTTGGATGGCAAATTC
FY431580       --> CTCCCATCTTCAACGAGTTGGTTGATCGGATCAGCTTGGATGGCAAATTC
FY453676       --> CTCCCATCTTCAACGAGTTGGTTGATCGGATCAGCTTGGATGGCAAATTC
EV525304       --> ..................................................
FY452888       --> ..................................................
EV537848       --> ..................................................
EW717156       --> ..................................................

               451    -    501
UN22154        --> ATACAAGACAGTCTCTCCAGAACGAAAAAAGCTGATGTCTTTACATCTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435891       <-- ..................................................
EV530094       <-- ..................................................
EV542003       <-- ..................................................
EX892507       <-- ..................................................
EY912398       <-- ..................................................
FD976152       <-- ..................................................
FY428349       --> ATACAAGACAGTCTCTCCAGAACGAAAAAAGCTGATGTCTTTACATCTAG
FD563605       --> ATTCAAGACAGTCTCTCCAGAACGAAAAAAGCTGATGTCTTTACATCTAG
FY431580       --> ATACAAGACAGTCTCTCCAGAACGAAAAAAGCTGATGTCTTTACATCTAG
FY453676       --> ATACAAGACAGTCTCTCCAGAACGAAAAAAGCTGATGTCTTTACATCTAG
EV525304       --> ..................................................
FY452888       --> ..................................................
EV537848       --> ..................................................
EW717156       --> ..................................................

               501    -    551
UN22154        --> ACTTCTTGACATTCATTCCAAGATGCTAGAAAGCAACAAGAGAGAGGACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435891       <-- ..................................................
EV530094       <-- ..................................................
EV542003       <-- ..................................................
EX892507       <-- ..................................................
EY912398       <-- ..................................................
FD976152       <-- ..................................................
FY428349       --> ACTTCTTGACATTCATTCCAAGATGCTAGAAAGCAACAAGAGAGAGGACA
FD563605       --> ACTTCTTGACATTCACTCCAAGATGCTAGAAAGCAACAAGAGAGAGGACA
FY431580       --> ACTTCTTGACATTCATTCCAAGATGCTAGAAAGCAACAAGAGAGAGGACA
FY453676       --> ACTTCTTGACATTCATTCCAAGATGCTAGAAAGCAACAAGAGAGAGGACA
EV525304       --> ................................................CA
FY452888       --> ..................................................
EV537848       --> ..................................................
EW717156       --> ..................................................

               551    -    601
UN22154        --> TTCGTTTAGGTTTACACCGGTCAGATTATATGCTTGACGAGCAAACAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435891       <-- ..................................................
EV530094       <-- ..................................................
EV542003       <-- ..................................................
EX892507       <-- ..................................................
EY912398       <-- ..................................................
FD976152       <-- ..................................................
FY428349       --> TTCGTTTAGGTTTACACCGGTCAGATTATATGCTTGACGAGCAAACAAAA
FD563605       --> TTCGTTTGGGTTTACACCGGTCAGATTACATGCTTGACGAGCAAACAAAA
FY431580       --> TTCGTTTAGGTTTACACCGGTCAGATTATATGCTTGACGAGCAAACAAAA
FY453676       --> TTCGTTTAGGTTTACACCGGTCAGATTATATGCTTGACGAGCAAACAAAA
EV525304       --> TTCGTTTGGGTTTACACCGGTCAGATTACATGCTTGACGAGCAAACAAAA
FY452888       --> ..................................................
EV537848       --> ..................................................
EW717156       --> ..................................................

               601    -    651
UN22154        --> TCGCTTCTTCAGATAGAGATGAACACTATTTCGTGTTCCTTTCCAGGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435891       <-- ..................................................
EV530094       <-- ..................................................
EV542003       <-- ..................................................
EX892507       <-- ..................................................
EY912398       <-- ..................................................
FD976152       <-- ..................................................
FY428349       --> TCGCTTCTTCAGATAGAGATGAACACTATTTCGTGTTCCTTTCCAGGCTT
FD563605       --> TCGCTTCTTCAGATAGAGATGAACACTATTTCGTGTTCCTTTCCAGGCTT
FY431580       --> TCGCTTCTTCAGATAGAGATGAACACTATTTCGTGTTCCTTTCCAGGCTT
FY453676       --> TCGCTTCTTCAGATAGAGATGAACACTATTTCGTGTTCCTTTCCAGGCTT
EV525304       --> TCGCTTCTTCAGATAGAGATGAATACTATTTCGTGTTCCTTTCCAGGCTT
FY452888       --> ..............................................GCTT
EV537848       --> ..................................................
EW717156       --> ..................................................

               651    -    701
UN22154        --> TGGTCCTCTTGTTACCAAGCTACACCAGTCATTGCTTAGATCTCATGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435891       <-- ..................................................
EV530094       <-- ..................................................
EV542003       <-- ..................................................
EX892507       <-- ..................................................
EY912398       <-- ..................................................
FD976152       <-- ..................................................
FY428349       --> TGGTCCTCTTGTTACCAAGCTACACCAGTCATTGCTTAGATCTCATGGTG
FD563605       --> TGGTCCTCTTGTTACCAAGCTACACCAGTCATTGCTAAGATCTTATGGGG
FY431580       --> TGGTCCTCTTGTTACCAAGCTACACCAGTCATTGCTTAGATCTCATGGTG
FY453676       --> TGGTCCTCTTGTTACCAAGCTACACCAGTCATTGCTTAGATCTCATGGTG
EV525304       --> TGGTCCTCTTGTTACCAAGCTACACCAGTCATTGCTAAGATCTTATGGGG
FY452888       --> TGGTCCTCTTGTTACCAAGCTACACCAGTCATTGCTTAGATCTCATGGTG
EV537848       --> ..................................................
EW717156       --> ..................................................

               701    -    751
UN22154        --> ATCATCTTGGGCTAGACTCTGAACGTGTACCTAGAAATGCATCCACGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435891       <-- ..................................................
EV530094       <-- ..................................................
EV542003       <-- ..................................................
EX892507       <-- ..................................................
EY912398       <-- ..................................................
FD976152       <-- ..................................................
FY428349       --> ATCATCTTGGGCTAGACTCTGAACGTGTACCTAGAAATGCATCCACGATC
FD563605       --> ATCATCTTGGGCTAGACTCTGAACGTGTACCTAAAAATGCATCAACAATC
FY431580       --> ATCATCTTGGGCTAGACTCTGAACGTGTACCTAGAAATGCATCCACGATC
FY453676       --> ATCATCTTGGGCTAGACTCTGAACGTGTACCTAGAAATGCATCCACGATC
EV525304       --> ATCATCTTGGGCTAGACTCAGAACGTGTACCTAAAAATGCATCAACAATC
FY452888       --> ATCATCTTGGGCTAGACTCTGAACGTGTACCTAGAAATGCATCCACGATC
EV537848       --> ..................................................
EW717156       --> ..................................................

               751    -    801
UN22154        --> CAGTTTGCTGACGCAATGGCTAAAGCTTGGTTGGAGTACAATAACCCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435891       <-- ..................................................
EV530094       <-- ..................................................
EV542003       <-- ..................................................
EX892507       <-- ..................................................
EY912398       <-- ..................................................
FD976152       <-- ..................................................
FY428349       --> CAGTTTGCTGACGCAATGGCTAAAGCTTGGTTGGAGTACAATAACCCAAG
FD563605       --> CAGTTTGCTGACGCAATGGCTAGAACTTGGTTGGAGTACAATAACCCAAG
FY431580       --> CAGTTTGCTGACGCAATGGCTAAAGCTTGGTTGGAGTACAATAACCCAAG
FY453676       --> CAGTTTGCTGACGCAATGGCTAAAGCTTGGTTGGAGTACAATAACCCAAG
EV525304       --> CAGTTTGCTGACGCAATGGCTAGAGCTTGGTTGGAGTACAATAACCCAAG
FY452888       --> CAGTTTGCTGACGCAATGGCTAAAGCTTGGTTGGAGTACAATAACCCAAG
EV537848       --> ..................................................
EW717156       --> ..................................................

               801    -    851
UN22154        --> AGCGGTTGTTATGGTCGTTGTGCAGCCTGATGAGCGCAACATGTACGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435891       <-- ..................................................
EV530094       <-- ..................................................
EV542003       <-- ..................................................
EX892507       <-- ..................................................
EY912398       <-- ..................................................
FD976152       <-- ..................................................
FY428349       --> AGCGGTTGTTATGGTCGTTGTGCAGCCTGATGAGCGCAACATGTACGATC
FD563605       --> AGCGGTTGTTATGGTCGTTGTGCAGCCTGATGAGCGCAACATGTACGATC
FY431580       --> AGCGGTTGTTATGGTCGTTGTGCAGCCTGATGAGCGCAACATGTACGATC
FY453676       --> AGCGGTTGTTATGGTCGTTGTGCAGCCTGATGAGCGCAACATGTACGATC
EV525304       --> AGCGGTTGTTATGGTCGTTGTGCAGCCTGATGAGCGCAACATGTACGATC
FY452888       --> AGCGGTTGTTATGGTCGTTGTGCAGCCTGATGAGCGCAACATGTACGATC
EV537848       --> ..................................................
EW717156       --> ..................................................

               851    -    901
UN22154        --> AACATTGGCTAAGCAGTGTATTGAGAGAAAAGCACAATATAGTAACCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435891       <-- ..................................................
EV530094       <-- ..................................................
EV542003       <-- ..................................................
EX892507       <-- ..................................................
EY912398       <-- ..................................................
FD976152       <-- ..................................................
FY428349       --> AACATTGGCTAAGCAGTGTATTGAGAGAAAAGCACAATATAGTAACCAT.
FD563605       --> AACATTGGCTAAGCAGTGTATTGAGAGAAA-GCACAATATAGTAACCATC
FY431580       --> AACATTGGCTAAGCAGTGTATTGAGAGAAAAGCACAATATAGTAACCATC
FY453676       --> AACATTGGCTAAGCAGTGTATTGAGAGAAAAGCACAATATAGTAACCATC
EV525304       --> AACATTGGCTAAGCAGTGTATTGAGAGAAAAGCACAATATAGTAACCATC
FY452888       --> AACATTGGCTAAGCAGTGTATTGAGAGAAAAGCACAATATAGTAACCATC
EV537848       --> ..................................................
EW717156       --> ..................................................

               901    -    951
UN22154        --> AGGAAGTCTTTAGCGGAAGTTGAAAATGAAGGGCGTGTACATGAGGACGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435891       <-- .............CGGAAGTTGAAAATGAAGGGCGTGTACATGAGGACGG
EV530094       <-- ..................................................
EV542003       <-- ..................................................
EX892507       <-- ..................................................
EY912398       <-- ..................................................
FD976152       <-- ..................................................
FY428349       --> ..................................................
FD563605       --> AG-AAGTCTTTAGCAGAAGTTGAAAATGAAGG-CGTGTACATGAGGACGG
FY431580       --> AGGAAGTCTTTAGCGGAAGTTGAAAATGAAGGGCGTGTACATGAGGACGG
FY453676       --> AGGAAGTCTTTAGCGGAAGTTGAAAATGAAGGGCGTGTACATGAGGACGG
EV525304       --> AGGAAGTCTTTAGCAGAAGTTGAAAATGAAGGGCGTGTACATGAGGACGG
FY452888       --> AGGAAGTCTTTAGCGGAAGTTGAAAATGAAGGGCGTGTACATGAGGACGG
EV537848       --> .............................gGGGCGTGTACACGAGGACGG
EW717156       --> ..................................................

               951    -   1001
UN22154        --> TACTCTTATTGTTGGCGGCCAAGCAGTCTCGGTGGTTTATTACAGATCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435891       <-- TACTCTTATTGTTGGCGGCCAAGCAGTCTCGGTGGTTTATTACAGATCAG
EV530094       <-- .............GGCGGCCAAGCAGTCTCGGTGGTTTATTACAGATCAG
EV542003       <-- ..................................................
EX892507       <-- ..................................................
EY912398       <-- ..................................................
FD976152       <-- ..................................................
FY428349       --> ..................................................
FD563605       --> TAC...............................................
FY431580       --> TACTCTTATTGTTGGCGGCCAAGCAGTCTCGG..................
FY453676       --> TACTCTTATTGTTGGCGGCCAAGCAGTCTCGGTGGTTTATTACAGATCAG
EV525304       --> TACTCTTATTGTTGGCGGCCAAGCAGTCTCGGTGGTTTATTACAGATCAG
FY452888       --> TACTCTTATTGTTGGCGGCCAAGCAGTCTCGGTGGTTTATTACAGATCAG
EV537848       --> TACTCTTACTGTTGGCGGCCAAGCAGTCTCGGTGGTTTATTACAGATCAG
EW717156       --> ..................................................

               1001   -   1051
UN22154        --> GCTATACTCCTAGAGATTATCCCTCTGAATCAGAATGGAATGCTAGGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435891       <-- GCTATACTCCTAGAGATTATCCCTCTGAATCAGAATGGAATGCTAGGTTG
EV530094       <-- GCTATACTCCTAGAGATTATCCCTCTGAATCAGAATGGAATGCTAGGTTG
EV542003       <-- .............................TCAGAATGGAATGCTAGGTTG
EX892507       <-- ..................................................
EY912398       <-- ..................................................
FD976152       <-- ..................................................
FY428349       --> ..................................................
FD563605       --> ..................................................
FY431580       --> ..................................................
FY453676       --> GCTATACTCCTAGAGATTATCCCTCTGAATCAGAATGGAATGCTAGGTTG
EV525304       --> GCTATACTCCTAGAGATTATCCCTCTGAATCAGAATGGAATGCTAGGTTG
FY452888       --> GCTATACTCCTAGAGATTATCCCTCTGAATCAGAATGGAATGCTAGGTTG
EV537848       --> GCTATACTCCTAGAGATTATCCGTCTGAATCAGAATGGAATGCTAGGTTG
EW717156       --> ..................................................

               1051   -   1101
UN22154        --> CTTATAGAGCAGTCCTCAGCTGTCAAGTGCCCTTCTATATCTTATCACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435891       <-- CTTATAGAGCAGTCCTCAGCTGTCAAGTGCCCTTCTATAGCTTATCACTT  Raphanus sativus cv GSK3-1
EV530094       <-- CTTATAGAGCAGTCAGCAGCTGTCAAGTGCCCTTCTATATCTTATCACTT  Raphanus raphanistrum subsp. maritimus
EV542003       <-- CTTATAGAGCAGTCCTCAGCTGTCAAGTGCCCTTCTATATCTTATCACTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX892507       <-- .TTATTGAGCAGTC-TCAGCTGTCAAGTGCCCTTCTATAGCTTATCACTT  Raphanus sativus var. oleiformis
EY912398       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976152       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY428349       --> ..................................................  Raphanus sativus cv GSK3-1
FD563605       --> ..................................................  Raphanus sativus var. oleiformis
FY431580       --> ..................................................  Raphanus sativus cv GSK3-1
FY453676       --> CTTATAGAGCAGTCCTCAGCTGTCAAG.......................  Raphanus sativus cv GSK3-1
EV525304       --> CTTATAGAGCAGTCAGCAGCTGTCAAGTGCCCTTCTATATCTTATCACTT  Raphanus raphanistrum subsp. maritimus
FY452888       --> CTTATAGAGCAGTCCTCAGCTGTCAAGTGCCCTTCTATAGCTTATCACTT  Raphanus sativus cv GSK3-1
EV537848       --> CTTATAGAGCAGTCCTCAGCTGTCAAGTGCCCTTCTATATCTTATCACTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717156       --> ..................................................  Raphanus sativus var. oleiformis

               1101   -   1151
UN22154        --> AGCTGGCACCAAGAAAATCCAGCAAGAACTCGCTAAACCAGGTGTTCTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435891       <-- AGCTGGCACCAAGAAAATCCAGCAAGAACTCGCTAAACCAGGTGTTCTCG
EV530094       <-- AGCTGGCACCAAGAAGATCCAGCAAGAACTCGCTAAACCAGGTGTTCTCG
EV542003       <-- AGCTGGCACCAAGAAAATCCAGCAGGAACTCGCTAAACCAGGTGTTCTCG
EX892507       <-- AGCTGGCACCAAGAAAATCCAGCAAGAACTCGCTAAACCAGGTGTTCTCG
EY912398       <-- ..................................................
FD976152       <-- ..................................................
FY428349       --> ..................................................
FD563605       --> ..................................................
FY431580       --> ..................................................
FY453676       --> ..................................................
EV525304       --> AGCTGGCACCAAGAAGATCCAGCAAGAACTCGCTAAACCAGGTGTTCTCG
FY452888       --> AGCTGGCACCAAGAAAATCCAGCAAGAACTCGCTAAACCAGGTGTTCTCG
EV537848       --> AGCTGGCACCAAGAAAATCCAGCAGGAACTCGCTAAACCAGGTGTTCTCG
EW717156       --> ...............................GCTAAACCAGGTGTTCTCC

               1151   -   1201
UN22154        --> AGAGGTTTATGGACAACAAAGATGACATAGCTAAGCTGAGGAAATGCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435891       <-- AGAGGTTTATGGACAACAAAGATGACATAGCTAAGCTGAGGAAATGCTTT
EV530094       <-- AGAGGTTTATGGAGAACAAAGATGACATAGCTAAGCTGAGGAAATGCTTT
EV542003       <-- AGAGGTTTATGGACAACAAAGATGACATAGCTAAGCTGAGGAAATGCTTT
EX892507       <-- AGAGGTTTATGGACAACAAAGATGACATAGCTAAGCTGAGGAAATGCTTT
EY912398       <-- ................................AAGCTGAGGAAATGCTTT
FD976152       <-- ............................................TGCTTT
FY428349       --> ..................................................
FD563605       --> ..................................................
FY431580       --> ..................................................
FY453676       --> ..................................................
EV525304       --> AGAGGTTTATGGAGAACAAAGATGACATAGCTAAGCTGAGGAAATGCTTT
FY452888       --> AGAGGTTTATGGACAACAAAGATGACATAGCTAAGCTGAGGAAATGCTTT
EV537848       --> AGAGGTTTATGGACAACAAAGATGACATAGCTAAGCTGAGGAAATGCTTT
EW717156       --> AGAGGTTTATGGACAACAAAGATGACATAGCTAAGCTGAGGAAATGCTTT

               1201   -   1251
UN22154        --> GCTGGGCTTTGGAGCTTGGACGATCAAGAAATCATCAAGAAAGCTATTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435891       <-- GCTGGGCTTTGGAGCTTGGACGATCAAGAAATCATCAAGAAAGCTATTGG
EV530094       <-- GCTGGGCTTTGGAGCTTGGACGATCCAGAAATCATCAAGAAAGCTATTGA
EV542003       <-- GCTGGGCTTTGGAGCTTGGACGATCAAGAAATCATCAAGAAAGCTATTGA
EX892507       <-- GCTGGGCTTTGGAGCTTGGACGATCAAGAAATCATCAAGAAAGCTATTGA
EY912398       <-- GCTGGGCTTTGGAGCTTGGACGATCAAGAAATCATCAAGAGAGCAATTGA
FD976152       <-- GCTGGGCTTTGGAGCTTGGACGATCAAGAAATCATCAAGAGAGCAATTGA
FY428349       --> ..................................................
FD563605       --> ..................................................
FY431580       --> ..................................................
FY453676       --> ..................................................
EV525304       --> GCTGGGCTTTGGAGCTTGGACGATCCAGAAATCATCAAGAAAGCTATTGA
FY452888       --> GCTGGGCTTTGGAGCTTGGACGATCAAGAAATCATCAAGAAAGCTATTGG
EV537848       --> GCTGGGCTGTGGAGCTTGGACGATCAAGAAATCATCAAGAAAGCTATTGA
EW717156       --> GCTGGGCTTTGGAGCTTGGACGATCAAGAAATCATCAAGAAAGCTATTGG

               1251   -   1301
UN22154        --> AAAACCGGAGTTGTTTGTCATGAAGCCTCAGAGAGAAGGAGGAGGTAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435891       <-- AAAACCGGAGTTGTTTGTCATGAAGCCTCAGAGAGAAGGAGGAGGTAACA  Raphanus sativus cv GSK3-1
EV530094       <-- AAAACCTGAGTTGTTTGTCATGAAGCCTCAGAGAGAAGGAGGAGGTAATA  Raphanus raphanistrum subsp. maritimus
EV542003       <-- AAAACCCGAGTTGTTTGTCATGAAGCCTCAGAGAGAAGGAGGAGGTAATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX892507       <-- AAAACCGGAGTTGTTTGTCATGAAGCCTCAGAGAGAAGGAGGAGGTAACA  Raphanus sativus var. oleiformis
EY912398       <-- AAAACCGGAGTTGTTTGTCATGAAGCCTCAGAGAGAAGGAGGAGGTAATA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976152       <-- AAAACCGGAGTTGTTTGTCATGAAGCCTCAGAGAGAAGGAGGAGGTAATA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY428349       --> ..................................................  Raphanus sativus cv GSK3-1
FD563605       --> ..................................................  Raphanus sativus var. oleiformis
FY431580       --> ..................................................  Raphanus sativus cv GSK3-1
FY453676       --> ..................................................  Raphanus sativus cv GSK3-1
EV525304       --> AAAACCTGAGTTGTTTGTCATGAAGCCTCAGAGAGAAGGAGGAGGTAATA  Raphanus raphanistrum subsp. maritimus
FY452888       --> AAAACCGGAGTTGTTTGTCATGAAGCCTCAGAGAGAAGGAGGAGGTAACA  Raphanus sativus cv GSK3-1
EV537848       --> AAAACCCGAGTTGTTTGTCATGAAGCCTCAGAGAGAAGGAGGAGGTAATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717156       --> AAAACCGGAGTTGTTTGTCATGAAGCCTCAGAGAGAAGGAGGAGGTAACA  Raphanus sativus var. oleiformis

               1301   -   1351
UN22154        --> ACATCTATGGAGATGATGTGAGGGAAAATCTTCTGAGATTGCAGAGAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435891       <-- ATATCTATGGAGATGATGTGAGGGAGAATCTTCTGAGGTTGCAGAGAGAA  Raphanus sativus cv GSK3-1
EV530094       <-- ACATCTATGGAGATGATGTGAGGGAAAATCTTCTGAGATTGCAGAGAGAA  Raphanus raphanistrum subsp. maritimus
EV542003       <-- ACATCTATGGAGATGATGTGAGGGAAAATCTTCTGAGATTGCAGAGAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX892507       <-- ATATCTATGGAGATGATGTGAGGGAGAATCTTCTGAGGTTGCAGAGAGAA  Raphanus sativus var. oleiformis
EY912398       <-- ACATCTATGGAGATGATGTGAGGGAAAATCTTCTGAGATTGCAGAGAGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976152       <-- ACATCTATGGAGATGATGTGAGGGAAAATCTTCTGAGATTGCAGAGAGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY428349       --> ..................................................  Raphanus sativus cv GSK3-1
FD563605       --> ..................................................  Raphanus sativus var. oleiformis
FY431580       --> ..................................................  Raphanus sativus cv GSK3-1
FY453676       --> ..................................................  Raphanus sativus cv GSK3-1
EV525304       --> ACATCTATGGAGATGATGTGAGGGAAAATCTTCTGAGATTGCAGAGAGAA  Raphanus raphanistrum subsp. maritimus
FY452888       --> ATATCTATGGAGATGATGTGAGGGAGAATCTTCTGAGGTTGCAGAGAGAA  Raphanus sativus cv GSK3-1
EV537848       --> ACATCTATGGAGATGATGTGAGGGAAAATCTTCTGAGATTGCAGAGAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717156       --> ATATCTATGGAGATGATGTGAGGGAGAATCTTCTGAGGTTGCAGAGAGAA  Raphanus sativus var. oleiformis

               1351   -   1401
UN22154        --> GGAGAGGAAGAAAACGCTGCGTATATCCTGATGCAGAGGATATTCCCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435891       <-- GGAGAGGAAGAAAACGCTGCATACATCCTAATGCAGAGGATCTTCCCAAA  Raphanus sativus cv GSK3-1
EV530094       <-- GGAGAGGAAGAAAACGCTGCGTATATCCTGATGCAGAGGATATTCCCAAA  Raphanus raphanistrum subsp. maritimus
EV542003       <-- GGAGAGGAAGAAAACGCTGCGTATATCCTGATGCAGAGGATATTCCCAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX892507       <-- GGAGAGGAAGAAAACGCTGCATACATCCTAATGCAGAGGATCTTCCCAAA  Raphanus sativus var. oleiformis
EY912398       <-- GGAGAGGAAGAAAACGCTGCGTATATCCTGATGCAGAGGATATTCCCAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976152       <-- GGAGAGGAAGAAAACGCTGCGTATATCCTGATGCAGAGGATATTCCCAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY428349       --> ..................................................  Raphanus sativus cv GSK3-1
FD563605       --> ..................................................  Raphanus sativus var. oleiformis
FY431580       --> ..................................................  Raphanus sativus cv GSK3-1
FY453676       --> ..................................................  Raphanus sativus cv GSK3-1
EV525304       --> G-AGAGGA-G-AAACGCTGCGTATATCCTGATGCAGAG-ATATTC.....  Raphanus raphanistrum subsp. maritimus
FY452888       --> GGAGAGGAAGAAAACGCTGCATACATCCTAATGCAGAGGATCTTCCCAAA  Raphanus sativus cv GSK3-1
EV537848       --> GGAGAGGAAGAAAACGCTGCGTATATCCTGATGCAGAGGATATTCCCAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717156       --> GGAGAGGAAGAAAACGCTGCATACATCCTAATGCAGAGGATCTTCCCAAA  Raphanus sativus var. oleiformis

               1401   -   1451
UN22154        --> AGTGTCAAACGTGTTCTTGCTGCGAGACGGTGTTTACCATAAAGATCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435891       <-- AGTGTCAAACGTGTTCTTGCTGCGAGACGGTGTTTACCATAAAGATCAAG
EV530094       <-- AGTGTCAAACGTGTTCTTGCTGCGAGACGGTGTTTACCATAAAGATCAAG
EV542003       <-- AGTGTCAAACGTGTTCTTGCTGCGAGACGGTGTTTACCATAAAGATCAAG
EX892507       <-- AGTGTCAAACGTGTTCTTGCTGCGAGACGGTGTTTACCATAAAGATCAAG
EY912398       <-- AGTGTCAAACGTGTTCTTGCTGCGAGACGGTGTTTACCATAAAGATCAAG
FD976152       <-- AGTGTCAAACGTGTTCTTGCTGCGAGACGGTGTTTACCATAAAGATCAAG
FY428349       --> ..................................................
FD563605       --> ..................................................
FY431580       --> ..................................................
FY453676       --> ..................................................
EV525304       --> ..................................................
FY452888       --> AGTGTCAAACGTGTTCTTGCTGCGAGACGGTGTTTACCATAAAGATCAAG
EV537848       --> AGTGTCAAACGTGTTCTTGCTGCGAGACGGTGTTTACCATAAAGATCAAG
EW717156       --> AGTGTCAAACGTGTTCTTGCTGCGAGACGGTGTTTACCATAAAGATCAAG

               1451   -   1501
UN22154        --> CTATATCAGAACTTGGAGTCTATGGGGCTTACCTCAGGAACAAGGAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435891       <-- CTATATCAGAACTTGGAGTCTATGGGGCTTACCTCAGGAACAAGGAGAGA
EV530094       <-- CTATATCAGAACTAGGAGTCTATGGTGCTTACCTCAGGAACAAGGAGAGA
EV542003       <-- CTATATCAGAACTTGGAGTCTATGGGGCTTACCTCAGGAACAAGGAGAGA
EX892507       <-- CTATATCAGAACTTGGAGTCTATGGGGCTTACCTCAGGAACAAGGAGAGA
EY912398       <-- CTATATCAGAACTTGGAGTCTATGGGGCTTACCTCAGGAACAAGGAGAGA
FD976152       <-- CTATATCAGAACTTGGAGTCTATGGGGCTTACCTCAGGAACAAGGAGAGA
FY428349       --> ..................................................
FD563605       --> ..................................................
FY431580       --> ..................................................
FY453676       --> ..................................................
EV525304       --> ..................................................
FY452888       --> CTATATCAGAACTTGGAGTCTATGGGGCTTACCTCAGGAACAAGGAGAGA
EV537848       --> CTATATCAGAACTTGGAGTCTATGGGGCTTACCTCAGGAACAAGGAGAGA
EW717156       --> CTATATCAGAACTTGGAGTCTATGGGGCTTACCTCAGGAACAAGGAGAGA

               1501   -   1551
UN22154        --> GTTATAATAAACGAGCAGAGTGGTTATCTGATGCGCACAAAGGTCTCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435891       <-- GTCATAATAAACGAGCAGAGTGGTTATCTGATGCGCACTAAGGTCTCTTC  Raphanus sativus cv GSK3-1
EV530094       <-- GTTATAATAAACGAGCAGAGTGGTTATCTGATGCGCACAAAGGTCTCTTC  Raphanus raphanistrum subsp. maritimus
EV542003       <-- GTTATAATAAACGAGCAGAGTGGTTATCTGATGCGCACAAAGGTCTCTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX892507       <-- GTCATAATAAACGAGCAGAGTGGTTATCTGATGCGCACTAAGGTCTCTTC  Raphanus sativus var. oleiformis
EY912398       <-- GTTATAATAAACGAGCAGAGTGGTTATCTGATGCGCACAAAGGTCTCTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976152       <-- GTTATAATAAACGAGCAGAGTG............................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY428349       --> ..................................................  Raphanus sativus cv GSK3-1
FD563605       --> ..................................................  Raphanus sativus var. oleiformis
FY431580       --> ..................................................  Raphanus sativus cv GSK3-1
FY453676       --> ..................................................  Raphanus sativus cv GSK3-1
EV525304       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY452888       --> GTCATAAATAACGAGCAGAGTGGTTATCTGATG.................  Raphanus sativus cv GSK3-1
EV537848       --> GTTATAATAAACGAGCAGAGTGGTTATCTGATGCGCACAAAGGTCTCTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717156       --> GTTATAATAAACGAGCAGAGTGGTTATCTGATGCGCACTAAGGTCTCTTC  Raphanus sativus var. oleiformis

               1551   -   1601
UN22154        --> ATCAGATGAAGGTGGTGTTGCGGCTGGTTATGCTGTATTGGACAGCATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435891       <-- ATCAGATGAAGGTGGTGTTGCGGCTGGTTATGCTGTATTGGACAGCATTT  Raphanus sativus cv GSK3-1
EV530094       <-- ATCAGATGAAGGTGGTGTTGCGGCTGGTTATGCTGTATTGGACAGCATTT  Raphanus raphanistrum subsp. maritimus
EV542003       <-- ATCAGATGAAGGTGGTGTTGCGGCTGGTTTTGCTGTACTGGACAGCATTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX892507       <-- ATCAGATGAAGGTGGTGTTGCGGCTGGTTATGCTGTATTGGACAGCATTT  Raphanus sativus var. oleiformis
EY912398       <-- ATCAGATGAAGGTGGTGTTGCGGCTGGTTATGCTGTACTGGACAGCATTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976152       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY428349       --> ..................................................  Raphanus sativus cv GSK3-1
FD563605       --> ..................................................  Raphanus sativus var. oleiformis
FY431580       --> ..................................................  Raphanus sativus cv GSK3-1
FY453676       --> ..................................................  Raphanus sativus cv GSK3-1
EV525304       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY452888       --> ..................................................  Raphanus sativus cv GSK3-1
EV537848       --> ATCAGATGAAAGTGGTGTTGCGGCTGGTTTTGCTGTACTGGACAGCATTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717156       --> ATCAGATGAAGGTGGTGTTGCGGCTGGTTATGCTGTATTGGACAGCATTT  Raphanus sativus var. oleiformis

               1601   -   1651
UN22154        --> ATCTGAATTGAGATGGGATCACATTCACTAATCATCCTGATTGATTCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435891       <-- ATCTGAATTGAGATGGGATCACATTCACTAATCATCCTGATTGATTCATG
EV530094       <-- ATCTGAATTGAGATGGGATCACATTCACTAATCATCCTGATTGATTCATG
EV542003       <-- ATCTGAATTGAGATGGGATCATATTCACTAACCATCCTGATTGATTCATG
EX892507       <-- ATCTGAATTGAGATGGGATCACATTCACTAATCATCCTGATTGATTCATG
EY912398       <-- ATCTGAATTGAGATGGGATCACATTCAATAATCATCCTGATTGATTCATG
FD976152       <-- ..................................................
FY428349       --> ..................................................
FD563605       --> ..................................................
FY431580       --> ..................................................
FY453676       --> ..................................................
EV525304       --> ..................................................
FY452888       --> ..................................................
EV537848       --> ATCTGAATTGAGATGGGATCATATTCACTAACCATCCTGATTGATTCATG
EW717156       --> ATCTGAATTGAGATGGGATCACATTCAATAATCATCCTGATTAATTCATG

               1651   -   1701
UN22154        --> TTTATGCTGGTTCATTTTCTTTTTTTTCTTTAGTCTTCCTGCTTGCTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435891       <-- TTTATGCTGGTTCATTTTCTTTTTTTTCTTTAGTCTTCCTGCTTGCTTGT
EV530094       <-- TTTATGCTGGTTCATTTTCTTTTTTTTCTTTAGTCTTCCTGCTTGCTTGT
EV542003       <-- TTTATGCTGGTTCATTTTCTTTTTTT-CTTTAGTCTTCCTGCTTGCTTGT
EX892507       <-- TTTATGCTGGTTCATTTTCTTTTTTTTCTTTAGTCTTCCTGCTTGCTTGT
EY912398       <-- TTTATGCTGGTTTATTTTCTTTTGTTTCTTTAGTCTTGCTGCTTGCTTGT
FD976152       <-- ..................................................
FY428349       --> ..................................................
FD563605       --> ..................................................
FY431580       --> ..................................................
FY453676       --> ..................................................
EV525304       --> ..................................................
FY452888       --> ..................................................
EV537848       --> TTTATGCTGGTTCATTTTC...............................
EW717156       --> TTTATGCTGGTTCATTTTCTTTTTT--CCTTAGTCTTCCTGCTTGCTTGT

               1701   -   1751
UN22154        --> TTAAGATTTGTGTACTGATTCATGAAGATCTATAAAACAAGATTAGACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435891       <-- TTAAGATTTGTGTACTGATTCATGAAGATCT-TAAAACAAGATTgc....
EV530094       <-- TTAAGATTTGTGTACTGATTCATGAAGATCTATAAAACAAGATTAGACAG
EV542003       <-- TTAAGATTTGTGTACTGATTCATGAAGATCTATAAAACAAGATTAGACAG
EX892507       <-- TTAAGATTTGTGTACTGATTCATGAAGATCTATAAAACAAGATTAGACAG
EY912398       <-- TTAAGATTTGTGTGCTGATTCATGAAGATCTATAAAACAAGATTTGACAG
FD976152       <-- ..................................................
FY428349       --> ..................................................
FD563605       --> ..................................................
FY431580       --> ..................................................
FY453676       --> ..................................................
EV525304       --> ..................................................
FY452888       --> ..................................................
EV537848       --> ..................................................
EW717156       --> TTAAGATTTGTGTACTGATTCATGAAGATCTATAAAACAAGATTAGACAG

               1751   -   1801
UN22154        --> AGCTCTTTAAAATTATTTGAACAAAGCATATATTATTATATAAATGCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY435891       <-- ..................................................
EV530094       <-- AGCc..............................................
EV542003       <-- AGCTCTTTAAAATTATTTGAACAAAGC.......................
EX892507       <-- AGCTCTTTAAAATTATTTGAACAAAGCATATAgaaatgcttctac.....
EY912398       <-- AGCTCTTTAAAATTATTTGAACAAAGCATATATTATTATATAAATGCTTC
FD976152       <-- ..................................................
FY428349       --> ..................................................
FD563605       --> ..................................................
FY431580       --> ..................................................
FY453676       --> ..................................................
EV525304       --> ..................................................
FY452888       --> ..................................................
EV537848       --> ..................................................
EW717156       --> AGCTCTTT..........................................

               1801   -   1851
UN22154        --> CAC
                   ~~~
FY435891       <-- ...
EV530094       <-- ...
EV542003       <-- ...
EX892507       <-- ...
EY912398       <-- CAC
FD976152       <-- ...
FY428349       --> ...
FD563605       --> ...
FY431580       --> ...
FY453676       --> ...
EV525304       --> ...
FY452888       --> ...
EV537848       --> ...
EW717156       --> ...