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Alignment for radish unigene UN22160

               1      -     51
UN22160        --> CCGTTCTCTGTTTTCTTTCCTTTTTAGATTGGCTTGTCTTTGTCGAAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547621       <-- ..................................................
EW734423       <-- ..................................................
FD560854       <-- ..................................................
FD577635       <-- ..................................................
FD567359       --> CCGTTCTCTGTTTTCTTTCCTTTTTAGATTGGCTTGTCTTTGTCGAAAAC
FD575302       --> .........................aaATTGGCTCGTCTTTGTCGAAAAC
EW730143       --> .........................................GTCGAAAAC
EX893949       --> .........................................GTCGAAAAC
EW738352       --> ...........................................aGAAAAC
FD546705       --> ..................................................
FD546835       --> ..................................................

               51     -    101
UN22160        --> AAGATCCAAATTCCACACACACAACAATAACAACAATACCAACAAAGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547621       <-- ..................................................
EW734423       <-- ..................................................
FD560854       <-- ..................................................
FD577635       <-- ..................................................
FD567359       --> AAGATCCAAATTCCACACACACAACAATAACAACAATACCAACAAAGTCC
FD575302       --> AAAATCCAAATTCCACACACACAACAATAACAACAATACCAACAAAGTCC
EW730143       --> AAGATCCAAATTCCACACACACAACAATAACAACAATACCAACAAAGTCC
EX893949       --> AAGATCCAAATTCCACACACACAACAATAACAACAATACCAACAAAGTCC
EW738352       --> AAGATCCAAATTCCACACACACGAAAATAACAACAATACCAACAAAGTCC
FD546705       --> ...........................cAACAACAATACCAACAAAGTCC
FD546835       --> ...........................cAACAACAATACCAACAAAGTCC

               101    -    151
UN22160        --> ACTCACACAACAATAACAACAGAAACAAACAAAAACAAAAGATACAAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547621       <-- ..................................................
EW734423       <-- ..................................................
FD560854       <-- ..................................................
FD577635       <-- ..................................................
FD567359       --> ACTCACACAACAATAACAACAGAAACAAACAAAAACAAAAGATACAAAAC
FD575302       --> ACTCCCACAACAATAACAACAGAAACAAACAAAAACAAAAGATACGAAAC
EW730143       --> ACTCCCACAACAATAACAACAGAAACAAACAAAAACAAAAGATACGAAAC
EX893949       --> ACTCACACAACAATAACAACAGAAACAAACAAAAACAAAAGATACAAAAC
EW738352       --> ACTCACACAACAATAACAACAGAAACAAACAAAAACAAAAGATACAAAAC
FD546705       --> ACTCACACAACAATAACAACAGAAACAAACAAAAACAAAAGATACAAAAC
FD546835       --> ACTCACACAACAATAACAACAGAAACAAACAAAAACAAAAGATACAAAAC

               151    -    201
UN22160        --> AAAATGCATTCCGCTAGTAAACAAACCACGCCACGAACATTTTATTCATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547621       <-- ..................................................
EW734423       <-- ..................................................
FD560854       <-- ..................................................
FD577635       <-- ..................................................
FD567359       --> AAAATGCATTCCGCTAGTAAACAAACCACGCCACGAACATTTTATTCATT
FD575302       --> AAAATGCATTCCGCTAGTAAACAAACCACGCCACGAACATTTTATTCATT
EW730143       --> AAAATGCATTCCGCTAGTAAACAAACCACGCCACGAACATTTTATTCATT
EX893949       --> AAAATGCATTCCGCTAGTAAACAAACCACGCCACGAACATTTTATTCATT
EW738352       --> AAAATGCATTCCGCTAGTAAACAAACCACGCCACGAACATTTTATTCATT
FD546705       --> AAAATGCATTCCGCTAGTAAACAAACCACGCCACGAACATTTTATTCATT
FD546835       --> AAAATGCATTCCGCTAGTAAACAAACCACGCCACGAACATTTTATTCATT

               201    -    251
UN22160        --> TTGCGTTTGGTCACTCATTTGTTGCCCTCATAAACAGATTTATCAAGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547621       <-- ..................................................
EW734423       <-- ..................................................
FD560854       <-- ..................................................
FD577635       <-- ..................................................
FD567359       --> TTGCGTTTGGTCACTCATTTGTTGCCCTCATAAACAGATTTATCAAGAAC
FD575302       --> TTGCGTTTGGTCACTCATTTGTTGCCCTCATAAACAGATTTATCAAGAAC
EW730143       --> TTGCGTTTGGTCACTCATTTGTTGCCCTCATAAACAGATTTATCAAGAAC
EX893949       --> TTGCGTTTGGTCACTCATTTGTTGCCCTCATAAACAGATTTATCAAGAAC
EW738352       --> TTGCGTTTGGTCACTCATTTGTTGCCCTCATAAACAGATTTATCAAGAAC
FD546705       --> TTGCGTTTGGTCACTCATTTGTTGCCCTCATAAACAGATTTATCAAGAAC
FD546835       --> TTGCGTTTGGTCACTCATTTGTTGCCCTCATAAACAGATTTATCAAGAAC

               251    -    301
UN22160        --> CCAAACGGCTGGCCAATACACAGACCCGATCCATAACTTCCCATCTTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547621       <-- ..................................................
EW734423       <-- ..................................................
FD560854       <-- ..................................................
FD577635       <-- ..................................................
FD567359       --> CCAAACGGCTGGCCAATACACAGACCCGATCCATAACTTCCCATCCTCCC
FD575302       --> CCAAACGGCTGGCCAATACACAAACCCGATCCATAACTTCCCATCTTCCC
EW730143       --> CCAAGCGGCTGGCCAATACACAGACCCGATCCATAACTTCCCATCTTCCC
EX893949       --> CCAAACGGCTGGCCAATACACAGACCCGATCCATAACTTCCCATCCTCCC
EW738352       --> CCAAACGGCTGGCCAATACACAGACCCGATCCATAACTTCCCATCTTCCC
FD546705       --> CCAAACGGCTGGCCAATACACAGACCCGATCCATAACTTCCCATCTTCCC
FD546835       --> CCAAACGGCTGGCCAATACACAGACCCGATCCATAACTTCCCATCTTCCC

               301    -    351
UN22160        --> TCTCATAAGCTTCACTAACATACTTCATCGTTGTCCCTTCACTATCCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547621       <-- ..................................................
EW734423       <-- ..................................................
FD560854       <-- ..................................................
FD577635       <-- ..................................................
FD567359       --> TCTCATAAGCTTCACTAACATACTTCATCGTTGTCCCTTCACTATCCTCA
FD575302       --> TCTCATAAGCTTCACTAACATACCTCATCGTTGTCCCTTCACTATCCTCA
EW730143       --> TCTCATAAGCTTCACTAACATACTTCATCGTTGTCACTTCACTATCCTCA
EX893949       --> TCTCATAAGCTTCACTAACATACTTCATCGTTGTCCCTTCACTATCCTCA
EW738352       --> TCTCATAAGCTTCACTAACATACTTCATCGTTGTCCCTTCACTATCCTCA
FD546705       --> TCTCATAAGCTTCACTAACATACTTCATCGTTGTCCCTTCACTATCCTCA
FD546835       --> TCTCATAAGCTTCACTAACATACTTCATCGTTGTCCCTTCACTATCCTCA

               351    -    401
UN22160        --> AGCATCTCAATAATCTCTCCGGTCTCTCCAGAGAGTTTCAAGATTATTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547621       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734423       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD560854       <-- ..................................................  Raphanus sativus var. oleiformis
FD577635       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD567359       --> AGCATCTCAATAATCTCTCCGGTCTCTCCAGAGAGTTTCAAGATTATTCC  Raphanus sativus var. oleiformis
FD575302       --> AGCATCTCAATAATCTCTCCGGTCTCTCCAAAAAGTTTCAAGATTATTCC  Raphanus sativus cv Early Scarlet Globe
EW730143       --> AGCATCTCAATAATCTCTCCGGTCTCTCCAGAAAGTTTCAAGATTATTCC  Raphanus sativus cv Early Scarlet Globe
EX893949       --> AGCATCTCAATAATCTCTCCGGTCTCTCCAGAGAGTTTCAAGATTATTCC  Raphanus sativus var. oleiformis
EW738352       --> AGCATCTCAATAATCTCTCCCGTCTCTCCAGAGAGTTTCAAGATTATTCC  Raphanus sativus cv Rat-Tail Radish #3870
FD546705       --> AGCATCTCAATAATCTCTCCCGTCTCTCCAGAGAGTTTCAAGATTATTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD546835       --> AGCATCTCAATAATCTCTCCCGTCTCTCCAGAGAGTTTCAAGATTATTCC  Raphanus raphanistrum subsp. raphanistrum (NY)

               401    -    451
UN22160        --> ATGAGGCTTCCCTCCGTTCATGAGATGAACCACTGTCTCCAACTTCAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547621       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734423       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD560854       <-- ..................................................  Raphanus sativus var. oleiformis
FD577635       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD567359       --> ATGAGGCTTCCCTCCGTTCATGAAATGAACCACTGTCTCCAACTTCAATG  Raphanus sativus var. oleiformis
FD575302       --> ATGAGGCTTCCCTCCGTTCATGAAATGAACCACTGTCTCCAACTTCAATG  Raphanus sativus cv Early Scarlet Globe
EW730143       --> ATGAGGCTTCCCTCCGTTCATGAAATGAACCACTGTCTCCAACTTCAATG  Raphanus sativus cv Early Scarlet Globe
EX893949       --> ATGAGGCTTCCCTCCGTTCATGAGATGAACCACTGTCTCCAACTTCAATG  Raphanus sativus var. oleiformis
EW738352       --> ATGAGGCTTCCCTCCGTTCATGAGATGAACCACTGTCTCCAACTTCAATG  Raphanus sativus cv Rat-Tail Radish #3870
FD546705       --> ATGAGGCTTCCCTCCGTTCATGAGATGAACCACTGTCTCCAACTTCAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD546835       --> ATGAGGCTTCCCTCCGTTCATGAGATGAACCACTGTCTCCAACTTCAATG  Raphanus raphanistrum subsp. raphanistrum (NY)

               451    -    501
UN22160        --> TATGCATGAAAAACTTTCCAACCCAAGAGTGAATAAGAAACAACCGAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547621       <-- ..................................................
EW734423       <-- ..................................................
FD560854       <-- ..................................................
FD577635       <-- ..................................................
FD567359       --> TATGCATGAAAAACTTTCCAACCCAAGAGTGAATAAAAAACAACCGAGTG
FD575302       --> TATGCATGAAAAACTTTCCAACCCAAGAGTGAATcaaaaa..........
EW730143       --> TATGCATGAAAAACTTTCCAACCCAAGAGTGAATCAAAAACAACCTAGTG
EX893949       --> TATGCATGAAAAACTTTCCAACCCAAGAGTGAATAAGAAACAACCGAGTG
EW738352       --> TATGCATGAAAAACTTTCCAACCCAAGAGTGAATAAGAAACAACCGAGTG
FD546705       --> TATGCATGAAAAACTTTCCAACCCAAGAGTGAATAAGAAACAACCGAGTG
FD546835       --> TATGCATGAAAAACTTTCCAACCCAAGAGTGAATAAAAAACAACCGAGTG

               501    -    551
UN22160        --> AACAAATTGTTCTTGCAGTGCAACGCGACCCAAAAATCGCCCGTAGGGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547621       <-- ..................................................
EW734423       <-- ..................................................
FD560854       <-- ..................................................
FD577635       <-- ..................................................
FD567359       --> AACAAATTGTTCTTGCAGTGCAACGCGACCCAAAAA..............
FD575302       --> ..................................................
EW730143       --> AACAAATTGCTCTTGCAGTGTAACGCGACCC...................
EX893949       --> AACAAATTGTTCTTGCAGTGCAACGCGACCCAAAAATCGCCCATAGGGGT
EW738352       --> AACAAATTGTTCT.....................................
FD546705       --> AACAAATTGTTCTTGCAGTGCAACGCGACCCAAAAATCGCCCGTAGGGGT
FD546835       --> AACAAATTGTTCTTGCAGTGCAACGCGACCCAAAAATCGCCCGTAGGGGT

               551    -    601
UN22160        --> ACGTCGGATATTGTCCATTATAACTTTGGCCTCTTTCTTCTTCATATCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547621       <-- ...........TGTCCATTATAACTTTGGCCTCTTTCTTCTTCATATCGT
EW734423       <-- ..................................................
FD560854       <-- ..................................................
FD577635       <-- ..................................................
FD567359       --> ..................................................
FD575302       --> ..................................................
EW730143       --> ..................................................
EX893949       --> ACGTCGGATATTGTCCGGAAGGCCA--GGCCTCTTTCTTCTTCATATCGT
EW738352       --> ..................................................
FD546705       --> ACGTCGGATATTGTCCATTATAACTTTGGCCTCTTTCTTCTTCATATCGT
FD546835       --> ACGTCGGATATTGTCCATTATAACTTTGGCCTCTTTCTTCTTCATATCGT

               601    -    651
UN22160        --> ATCTAATTACTCTTCCCACTTTGTCCCCGGATATAGACACGTAAAATACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547621       <-- ATCTAATTACTCTTCCCACTTTGTCCCCGGATATAGACACGTAAAATACT
EW734423       <-- .......TACTCTTCCCACTTTGTCCCCGGATATAGACACGTAAAATACT
FD560854       <-- ..................................................
FD577635       <-- ..................................................
FD567359       --> ..................................................
FD575302       --> ..................................................
EW730143       --> ..................................................
EX893949       --> ATCTAATTACTCTTCCCACTTTGTCCCCGGATATAGAGACGTAGAACACT
EW738352       --> ..................................................
FD546705       --> ATCAAATTACTCTTCCCACTTTGTCCCCGGATATAGACACGTAAAATACT
FD546835       --> ATCAAATTACTCTTCCCACTTTGTCCCCGGATATAGACACGTAAAATACT

               651    -    701
UN22160        --> TCTCCGAAATGGTATTTGTCGCTGCTATCATTGAAATAGAAGACGTCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547621       <-- TCTCCGAAATGGTATTTGTCGCTGCTATCATTGAAATAGAAGACGTCTTC
EW734423       <-- TCTCCGAAATGGTATTTGTCGCTGCTATCATTGAAATAGAAGACGTCTTC
FD560854       <-- ..................................................
FD577635       <-- ..................................................
FD567359       --> ..................................................
FD575302       --> ..................................................
EW730143       --> ..................................................
EX893949       --> TCCCCGAAATGGTATTTGTCGCTGCTATCATTGAAATAGAAGACGTCTTC
EW738352       --> ..................................................
FD546705       --> TCTCCGAAATGGTATTTGTCGCTGCTATCATTGAAATAGAAGACGTCTTC
FD546835       --> TCTCCGAAATGGTATTTGTCGCTGCTATCATTGAAATAGAAGACGTCTTC

               701    -    751
UN22160        --> TTCTTCGTCTATGTCCATTTGGTTCGCAAACATAACTTTGCGGCCTTCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547621       <-- TTCTTCGTCTATGTCCATTTGGTTCGCAAACATAACTTTGCGGCCTTCGG
EW734423       <-- TTCTTCGTCTATGTCCATTTGGTTCGCAAACATAACTTTGCGGCCTTCGG
FD560854       <-- .........................................GGCCTTCGG
FD577635       <-- ..................................................
FD567359       --> ..................................................
FD575302       --> ..................................................
EW730143       --> ..................................................
EX893949       --> CTCTTCGTCTATGTCCATTTGGTTCGCAAACATAACTTTGCGGCCTTCGG
EW738352       --> ..................................................
FD546705       --> TTCTTCGTCTATGTCCATTTGGTTCGCAAACATAACTTTGCGGCCTTCGG
FD546835       --> TTCTTCGTCTATGTCCATTTGGTTCGCAAACATAACTTTGCGGCCTTCGG

               751    -    801
UN22160        --> CTTCATCAACGACTAACTCGGCCAAGCCTCCTTCTGGTCCGACCTTCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547621       <-- CTTCATCAACGACTAACTCGGCCAAGCCTCCTTCTGGTCCGACCTTCATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734423       <-- CTTCATCAACGACTAACTCGGCCAAGCCTCCTTCTGGTCCGACCTTCATG  Raphanus sativus cv Rat-Tail Radish #3870
FD560854       <-- CTTCATCAACGACTAACTCGGCCAAGCCTCCTTCTGGTCCAACCTTCATG  Raphanus sativus var. oleiformis
FD577635       <-- ..TCATCAACGACTAACTCGGCCAAGCCTCTTTCTGGTCCAACCTTCATG  Raphanus sativus cv Rat-Tail Radish #3870
FD567359       --> ..................................................  Raphanus sativus var. oleiformis
FD575302       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW730143       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX893949       --> CTTCATCAACGACTAACTCGGCCAAGCCTCCTTCTGGTCCAACCTTCATG  Raphanus sativus var. oleiformis
EW738352       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD546705       --> CTTCATCAACGACTAACTCGGCCAAGCCTCCTTCTGGTCCGACCTTCATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD546835       --> CTTCATCAACGACTAACTCGGCCAAGCCTCCTTCTGGTCCGACCTTCATG  Raphanus raphanistrum subsp. raphanistrum (NY)

               801    -    851
UN22160        --> ACCCCAAAGTAACCATCACAAATGTACAAGTCTCCTGTTTTCCTGTGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547621       <-- ACCC-AAAGTAACCATCACAAATGTACAAGTCTCCTGTTTTCCTGTGGAA
EW734423       <-- ACACCAAAGTAACCATCACAAATGTACAAGTCTACTGTTTTCCTGTGGAA
FD560854       <-- ACCCCAAAGTAACCATCACAAATGTACAAGTCTCCTGTTTTCCTGTGGAA
FD577635       <-- ACCCCAAAGTAACCATCACAAATGTACAAGTCTCCTGTTTTCCTGTGGAA
FD567359       --> ..................................................
FD575302       --> ..................................................
EW730143       --> ..................................................
EX893949       --> ACCCCAAAGTA-CCATCACAAATGTACAAGTCTCCTGTTTTCCTGTGGAA
EW738352       --> ..................................................
FD546705       --> ACCCCAAAGTA--CATCACAAATGTACAAGTCTCCTG.............
FD546835       --> ACCCCAAAGTA--CATCACAAATGTACAAGTCTCCTGTTTTCCTGTGGAA

               851    -    901
UN22160        --> GCTAAGTCCTAAGGGTCTTCCACAACTTGGTACTACTTGATTCCTCGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547621       <-- GCTAAGTCCCAAGGGCCTTCCACAACTTGGTACTACTTGATTCCTCGAAC
EW734423       <-- GCTAAGTCCCAAGGGCCTTCCACAACTTGGTACTACTTGATTCCTCGAAC
FD560854       <-- GCTAAGTCCTAAGGGTCTTCCACAACTTGGTACTACTTGATTCCTCGAAC
FD577635       <-- GCTAAGTCCTAAGGGTCTTCCACAACTTGGTACTACTTGATTCCTCGAAC
FD567359       --> ..................................................
FD575302       --> ..................................................
EW730143       --> ..................................................
EX893949       --> GCTAAGTGCTAAGG-TCTTCCACA-CTTGGTAC.................
EW738352       --> ..................................................
FD546705       --> ..................................................
FD546835       --> GCTAAGTCC.........................................

               901    -    951
UN22160        --> AGTTATCTCTGTGAGGAGAAGTGTAGGCGAAGTCGACCCAGCCAAGTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547621       <-- AGTTATCTATGTGAGGAGAAGTGTAGGCGAAGTCGACCCAGCCAAATTCT
EW734423       <-- AGTTATCTCTGTGAGGAGAAGTGTAGGCGAAGTCGACCCAGCCAAATTCT
FD560854       <-- AGTTATCTCTGTGAGGAGAAGTGTAGGCGAAGTCGACCCAGCCAAGTTCT
FD577635       <-- AGTTATCTCTGTGAGGAGAAGTGTAGGCGAAGTCGACCCAGCCAAGTTCT
FD567359       --> ..................................................
FD575302       --> ..................................................
EW730143       --> ..................................................
EX893949       --> ..................................................
EW738352       --> ..................................................
FD546705       --> ..................................................
FD546835       --> ..................................................

               951    -   1001
UN22160        --> TCTCCGCGCCATTTGAGGATGCGACCGTCGGTGACACCGACATAAGGGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547621       <-- TCTCCGCGCCATTTGAGGATGCGACCGTCGGTGACACCGACATAAGGGCC
EW734423       <-- TCTCCGCGCCATTTGAGGATGCGACCGTCGGTGACACCGACATAAGGGCC
FD560854       <-- TCGCCGCGCCATTTGAGGATGCGACCGTCGGTGACACCGACATAAGGGCC
FD577635       <-- TCGCCGCGCCATTTGAGGATGCGACCGTCGGTGACACCGACATAAGGGCC
FD567359       --> ..................................................
FD575302       --> ..................................................
EW730143       --> ..................................................
EX893949       --> ..................................................
EW738352       --> ..................................................
FD546705       --> ..................................................
FD546835       --> ..................................................

               1001   -   1051
UN22160        --> TTCACCTTGTGAATCAAACTCTAAGCTCTCTGGTCCAACGCCGGGGAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547621       <-- TTCACCTTGTGAATCAAACTCTAAGCTCTCTGGTCCAACGCCGGGGAGAG
EW734423       <-- TTCACCTTGTGAATCAAACTCTAAGCTCTCTGGTCCAACGCCGGGGAGAG
FD560854       <-- TTCACCTTGTGAATCAAACTCTAAGCTCTCTGGTCCAACGCCGGGGAGAG
FD577635       <-- TTCACCTTGTGAATCAAACTCTAAGCTCTCTGGTCCAACGCCGGGGAGAG
FD567359       --> ..................................................
FD575302       --> ..................................................
EW730143       --> ..................................................
EX893949       --> ..................................................
EW738352       --> ..................................................
FD546705       --> ..................................................
FD546835       --> ..................................................

               1051   -   1101
UN22160        --> GAATGGTCTTAGCCACTCGAAGAACGTGTTTCGTACCCTTTAAACGGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547621       <-- GAATGGTCTTAGCCACTCGAAGAACGTGTTTCGTACCCTTTAAACGGTCC
EW734423       <-- GAATGGTCTTAGCCACTCGAAGAACGTGTTTCGTACCCTTTAAACGGTCC
FD560854       <-- GAATGGTCTTAGCCACTCGAAGAACGTGTTTCGTACCCTTTAAACGGTCC
FD577635       <-- GAATGGTCTTAGCCACTCGAAGAACGTGTTTCGTACCCTTTAAACGGTCC
FD567359       --> ..................................................
FD575302       --> ..................................................
EW730143       --> ..................................................
EX893949       --> ..................................................
EW738352       --> ..................................................
FD546705       --> ..................................................
FD546835       --> ..................................................

               1101   -   1151
UN22160        --> GGTTCGATGATAGTTGACCAGAATAAATAGCAAACGACGGCTAAGATAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547621       <-- GGCTCGATGATAGTTGACCAGAATAAATAGCAAACGACGGCTAAGATAAC
EW734423       <-- GGCTCGATGATAGTTGACCAGAATAAATAGCAAACGACGGCTAAGATAAC
FD560854       <-- GGTTCGATGATAGCTGACCAGAATAAATAGCAAACGACGGCTAAGATAAC
FD577635       <-- GGTTCGATGATAGCTGACCAGAATAAATAGCAAACGACGGCTAAGATAAC
FD567359       --> ..................................................
FD575302       --> ..................................................
EW730143       --> ..................................................
EX893949       --> ..................................................
EW738352       --> ..................................................
FD546705       --> ..................................................
FD546835       --> ..................................................

               1151   -   1201
UN22160        --> CGGAGCGGCGGCGACCGGCGTCAGAACTCTCCGGCTGATTGGCATTATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547621       <-- CGGAGCGGCCGCGACCGGCGTCAGAACTCTCCGACTGATTAGCATTATTT
EW734423       <-- CGGAGCGGCCGCGACCGGCGTCAGAACTCTCCGACTGATTGGCATTATTT
FD560854       <-- CGGAGCGGCGGCGACCGGCGTCAGAACTCTCCGGCTGATTGGCATTATTT
FD577635       <-- CGGAGCGGCGGCGACCGGCGTCAGAACTCTCCGGCTGATTGGCATTATTT
FD567359       --> ..................................................
FD575302       --> ..................................................
EW730143       --> ..................................................
EX893949       --> ..................................................
EW738352       --> ..................................................
FD546705       --> ..................................................
FD546835       --> ..................................................

               1201   -   1251
UN22160        --> TTCCTCTCTCTCTCTCTGGCTAATACGTGAAAGGGAAAATGTGTGAATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547621       <-- TTC-TCTCTCTCTCTCTGGCTAATACGTGAAAGGGAAAATGTGTGtcc..
EW734423       <-- TTC-TCTCTCTCTCTCTGGCTAATACGTGAAAGGGAAAATGTGTGAATCC
FD560854       <-- TTCCTCTCTCTCTCTCTctctctggctaatacgtggaaagaaaaa.....
FD577635       <-- TTCCTCTCTCTCTCTCTctctctggctaatacgtggaaagaaaaa.....
FD567359       --> ..................................................
FD575302       --> ..................................................
EW730143       --> ..................................................
EX893949       --> ..................................................
EW738352       --> ..................................................
FD546705       --> ..................................................
FD546835       --> ..................................................