RadishBase

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Alignment for radish unigene UN22181

               1      -     51
UN22181        --> CAAATTGCTTTTGAGATCTAGAAGTGTCTATATCAACCGATTTATTATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736800       <-- ..................................................
EX907429       <-- ..................................................
FD968526       <-- ..................................................
FD584307       <-- ..................................................
EY896194       <-- ..................................................
FD959580       <-- ..................................................
EX759133       <-- ..................................................
FY430872       --> CAAATTGCTTTTGAGATCTAGAAGTGTCTATATCAACCGATTTATTATGG
FY435815       --> ..................................................
EX903359       --> ..................................................
EX765532       --> ..................................................
FD548578       --> ..................................................
FD981132       --> ..................................................
EY899336       --> ..................................................
EW731542       --> ..................................................
FD580534       --> ..................................................
FD972680       --> ..................................................
EY900719       --> ..................................................
EX754925       --> ..................................................
FY442858       --> ..................................................
FY444295       --> ..................................................
EV569631       --> ..................................................
FD542435       --> ..................................................
FD963215       --> ..................................................
FD963595       --> ..................................................
FD535133       --> ..................................................

               51     -    101
UN22181        --> TCTTTAAAAAAAATAAAAAAATTAAAAGGTAGTTGTGACTTTTGTGAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736800       <-- ..................................................
EX907429       <-- ..................................................
FD968526       <-- ..................................................
FD584307       <-- ..................................................
EY896194       <-- ..................................................
FD959580       <-- ..................................................
EX759133       <-- ..................................................
FY430872       --> TCTTTAAAAAAAATAAAAAAATTAAAAGGTAGTTGTGACTTTTGTGAAAT
FY435815       --> ............................................gtgAAT
EX903359       --> ...............................................gtg
EX765532       --> ..................................................
FD548578       --> ..................................................
FD981132       --> ..................................................
EY899336       --> ..................................................
EW731542       --> ..................................................
FD580534       --> ..................................................
FD972680       --> ..................................................
EY900719       --> ..................................................
EX754925       --> ..................................................
FY442858       --> ..................................................
FY444295       --> ..................................................
EV569631       --> ..................................................
FD542435       --> ..................................................
FD963215       --> ..................................................
FD963595       --> ..................................................
FD535133       --> ..................................................

               101    -    151
UN22181        --> GTGAAAGGATAAAAAAAAA-A-CAAAAGCTGAAGAAAGGAAGCAATGGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736800       <-- ..................................................
EX907429       <-- ..................................................
FD968526       <-- ..................................................
FD584307       <-- ..................................................
EY896194       <-- ..................................................
FD959580       <-- ..................................................
EX759133       <-- ..................................................
FY430872       --> GTGAAAGGATAAAAAAAAA-AGCAAAAGCTGAAGAAAGGAAGCAATGGTA
FY435815       --> GTGAAAGGAAAAAAAAAAA-G-CAAAAGCTGAAGAAAGGAAGCAATGGTA
EX903359       --> GTGAAAGGATAAAAAAAAAGA-CAAAAGCTGAAGAAGGAAAGCAATGGTA
EX765532       --> ..GAAAGG-TAAAAAAAAA-A-CAAAAGCTGAAGAAAGGAAGCAATGGTA
FD548578       --> .gGAAAGGATAAAAAAAAA-A-CAAAAGCTGAAGAAAGGAAGCAATGGTA
FD981132       --> ggGAAAGGATAAAAAAAAA-A-CAAAAGCTGAAGAAAGGAAGCAATGGTA
EY899336       --> ...ggAGGATAAAAAAAAA---CAAAAGCTGAAGAAAGGAAGCAATGGTA
EW731542       --> ............................ggGAAGAAGGAAAGCAATGGTA
FD580534       --> ............................ggGAAGAAGGAAAGCAATGGTA
FD972680       --> ...................................ggaaAAGGAATGGCA
EY900719       --> ................................................TA
EX754925       --> ..................................................
FY442858       --> ..................................................
FY444295       --> ..................................................
EV569631       --> ..................................................
FD542435       --> ..................................................
FD963215       --> ..................................................
FD963595       --> ..................................................
FD535133       --> ..................................................

               151    -    201
UN22181        --> TCTATTCTGCGGTCAGTGGCAACGACTACAGCCGCCGTAGCCGCCGCGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736800       <-- ..................................................
EX907429       <-- ..................................................
FD968526       <-- ..................................................
FD584307       <-- ..................................................
EY896194       <-- ..................................................
FD959580       <-- ..................................................
EX759133       <-- ..................................................
FY430872       --> TCTATTCTGCGGTCAGTGGCAACGACTACAGCCGCCGTAGCCGCCGCGTC
FY435815       --> TCTATTCTGCGGTCAGTGGCAACGACTACAGCCGCCGTAGCCGCCGCGTC
EX903359       --> TCTATTCTCCGGTCAGTGGCAACGACTACAGCCGCCGTAGCCGCCGCGTC
EX765532       --> TCTGTTCTGCGGTCAGTGGCAACGACTACAGCCGCCGTAGCCGCCGCGTC
FD548578       --> TCTGTTCTGCGGTCAGTGGCAACGACTACAGCCGCCGTAGCCGCCGCGTC
FD981132       --> TCTGTTCTGCGGTCAGTGGCAACGACTACAGCCGCCGTAGCCGCCGCGTC
EY899336       --> TCTATTCTGCGGTCAGTGGCAACGACTACAGCCGCCGTAGCCGCCGCGTC
EW731542       --> TCTATTCTCCGGTCAGTGGCAACGACTACAGCCGCCGTAGCCGCCGCGTC
FD580534       --> TCTATTCTCCGGTCGGTGGCAACGACTACAGCCGCCGTAGCCGCCGCGTC
FD972680       --> TCTATTCTGCGGTCAGTGGCAACGACTACAGCCGCCGTAGCCGCCGCGTC
EY900719       --> TCTATTTTGCGGTCAGTGGCAACGACTACAGCCGCCGTAGCCGCCGCGTC
EX754925       --> .................gcggtcagtggcaacgactacAGCCGCCGCGTC
FY442858       --> .........................................CGCCGCGTC
FY444295       --> ..................................................
EV569631       --> ..................................................
FD542435       --> ..................................................
FD963215       --> ..................................................
FD963595       --> ..................................................
FD535133       --> ..................................................

               201    -    251
UN22181        --> TGCGATTCCAATCGCGATCGCCTTCTCCTCCTCTTCTTCTTCCTCTACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736800       <-- ..................................................
EX907429       <-- ..................................................
FD968526       <-- ..................................................
FD584307       <-- ..................................................
EY896194       <-- ..................................................
FD959580       <-- ..................................................
EX759133       <-- ..................................................
FY430872       --> TGCGATTCCAATCGCGATCGCCTTCTCCTCCTCTTCTTCTTCCTCTACCA
FY435815       --> TGCGATTCCAATCGCGATCGCCTTCTCCTCCTCTTCTTCTTCCTCTACCA
EX903359       --> TGCGATTCCAATCGCGATCGCCTTCTCCTCCTCTTCTTCTTCCTCTACCA
EX765532       --> TGCGATTCCAATCGCGATCGCTTTCTCCTCTTCTTCTCCTTCCTCTACCA
FD548578       --> TGCGATTCCAATCGCGATCGCTTTCTCCTCTTCTTCTCCTTCCTCTACCA
FD981132       --> TGCGATTCCAATCGCGATCGCTTTCTCCTCTTCTTCTCCTTCCTCTACCA
EY899336       --> TGCGATTCCAATCGCGATCGCCTTCTCCTCCTCGTCTT--TCCTCTACCA
EW731542       --> TGCGATTCCAATCGCGATCGCCTTCCCCTCCTCTTCTTCTTCCTCTACCA
FD580534       --> TGCGATTCCAATCGCGATCGCCTTCTCCTCCTCTTCTTCTTCCTCTACCA
FD972680       --> TGCGATTCCAATCGCGATCGCCTTCTCCTCCTCTTCTTCTTCCTCTACCA
EY900719       --> TGCGATTCCAATCGCGATCGCCTTCTCCTCCTCGTCTTCTTCCTCTACCA
EX754925       --> TGCGATTCCAATCGCGATCGCCTTCTCCTCCTCTTCTTCTTCCTCTACCA
FY442858       --> TGCGATTCCA-TCGCGATCGCCTTCTCCTCCTCTTCTTCTTCCTCTACCA
FY444295       --> ....ATTCCA-TCGCGATCGCCTTCTCCTCCTCTTCTTCTTCCTCTACCA
EV569631       --> ..................................................
FD542435       --> ..................................................
FD963215       --> ..................................................
FD963595       --> ..................................................
FD535133       --> ..................................................

               251    -    301
UN22181        --> AATCTCAATCTCCCAATCTCTCCTTTTCCTCCCGATCGTCTCCACGTCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736800       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX907429       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD968526       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD584307       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY896194       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD959580       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX759133       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY430872       --> AATCTCAATCTCCTAATCTCTCCTTTTCCTCCCGATCATCTCCACGTCGA  Raphanus sativus cv GSK3-1
FY435815       --> AATCTCAATCTCCTAATCTCTCCTTTTCCTCCCGATCATCTCCACGTCGA  Raphanus sativus cv GSK3-1
EX903359       --> AATCTCAATCTCCCAATCTCTCCTTTTCCTCCCGATCGTTACCCCGCCGA  Raphanus sativus cv Rat-Tail Radish #3870
EX765532       --> AATCTCAATCTCCCAATCTCTCCTTTTCCTCCCGATCGTCTCCACGTCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548578       --> AATCTCAATCTCCCAATCTCTCCTTTTCCTCCCGATCGTCTCCACGTCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981132       --> AATCTCAATCTCCCAATCTCTCCTTTTCCTCCCGATCGTCTCCACGTCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY899336       --> AATCCCAATCTCCCAATCTCTCCTTCTCCTCCCGGTCGTCTCCACGTCGT  Raphanus raphanistrum subsp. maritimus
EW731542       --> AATCTCAATCTCC-AATCTCTCCTTTTCCTCCCGATCGTTACCCCGCCGA  Raphanus sativus cv Rat-Tail Radish #3870
FD580534       --> AATCTCAATCTCCCAATCTCTCCTTTTCCTCCCGATCGTTACCCCGCCGA  Raphanus sativus cv Rat-Tail Radish #3870
FD972680       --> AATCTCAATCTCCCAATCTCTCCTTCTCCTCCCGATCGTCTCCACGTCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900719       --> AATCCCAATCTCCCAATCTCTCCTTCTCCTCCCGGTCGTCTCCACGTCGT  Raphanus raphanistrum subsp. maritimus
EX754925       --> AATCTCAATCTCCTAATCTCTCCTTTTCCTCCCGATCGTCTCCACGTCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY442858       --> AATCTCAATCTCCTAATCTCTCCTTTTCCTCCCGATCATCTCCACGTCGA  Raphanus sativus cv GSK3-1
FY444295       --> AATCTCAATCTCCTAATCTCTCCTTTTCCTCCCGATCATCTCCACGTCGA  Raphanus sativus cv GSK3-1
EV569631       --> ..................................................  Raphanus raphanistrum subsp. landra
FD542435       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD963215       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD963595       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD535133       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               301    -    351
UN22181        --> TTGGGTCTTTCACGAAGCTTCGCTAGCTCTCCGATGACGACCGTCCCCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736800       <-- .....TCTTTCACGAAGCTTCGCTAGCTCTCCGATGACGACCGTCCCCGT  Raphanus sativus cv Rat-Tail Radish #3870
EX907429       <-- .............GAAGCT-CGCTAGCTCTCCGATGACGACCGTCCCCGT  Raphanus sativus cv Rat-Tail Radish #3870
FD968526       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD584307       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY896194       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD959580       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX759133       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY430872       --> TTGGGGCTTTCACGAAGCTTCGCTAGCTCTCCGATGACGACCGTCCCCGT  Raphanus sativus cv GSK3-1
FY435815       --> TTGGGGCTTTCACGAAGCTTCGCTAGCTCTCCGATGACGACCGTCCCCGT  Raphanus sativus cv GSK3-1
EX903359       --> TTGGGTCTTTCACGAAGCTTCGCTAGCTCTCCGATGACGACCGTCCCCGT  Raphanus sativus cv Rat-Tail Radish #3870
EX765532       --> TTGGGTCTCTCACGAAGTTTCGCTAGCTCTCCGATGACGACCGTCCCCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548578       --> TTGGGTCTCTCACGAAGTTTCGCTAGCTCTCCGATGACGACCGTCCCCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981132       --> TTGGGTCCCTCACGAAGTTTCGCTAGCTCTCCGATGACGACCGTCCCCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY899336       --> TTGGGTCTCTCACGATGTTTCGCTAGCTCTCCGATGACGACCGTCCCCGT  Raphanus raphanistrum subsp. maritimus
EW731542       --> TTGGGTCTTTCACGAAGCTTCGCTAGCTCTCCGATGACGACCGTCCCCGT  Raphanus sativus cv Rat-Tail Radish #3870
FD580534       --> TTGAGTCTTTCACGAAGCTTCGCTAGCTCTCCGATGACGACCGTCCCCGT  Raphanus sativus cv Rat-Tail Radish #3870
FD972680       --> TTGGGTCTCTCACGAAGTTTCGCTAGCTCTCCGATGACGACCGTTCCCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900719       --> TTGGGTCTCTCACGAAGTTTCGCTAGCTCTCCGATGACGACCGTCCCCGT  Raphanus raphanistrum subsp. maritimus
EX754925       --> TTGGGGCTTTCACGAAGCTTCGCTAGCTCTCCGATGACGACCGTCCCCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY442858       --> TTGGGGCTTTCACGAAGCTTCGCTAGCTCTCCGATGACGACCGTCCCCGT  Raphanus sativus cv GSK3-1
FY444295       --> TTGGGGCTTTCACGAAGCTTCGCTAGCTCTCCGATGACGACCGTCCCCGT  Raphanus sativus cv GSK3-1
EV569631       --> ..................................................  Raphanus raphanistrum subsp. landra
FD542435       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD963215       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD963595       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD535133       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               351    -    401
UN22181        --> TTCCGATCGTAATCTCCCTCAGGAGGATCGAGTCGTCATGCCTCAGCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736800       <-- TTCCGA-CGTAATCTCTCTCAGGAGGATTGAGTCGTCATGCCTCAGCTTC
EX907429       <-- TTCTGATCG-CATCTCCCTCAGGAGGATCGAGTCGTCACGCCTCAGCTTC
FD968526       <-- ..................................................
FD584307       <-- ..................................................
EY896194       <-- ..................................................
FD959580       <-- ..................................................
EX759133       <-- ..................................................
FY430872       --> TTCCGATCGTAATCTCCCTCAGGAGGATCGAGTCGTCATGCCTCAGCTTC
FY435815       --> TTCCGATCGTAATCTCCCTCAGGAGGATCGAGTCGTCATGCCTCAGCTTC
EX903359       --> TTCTGATCGCAATCTCCCTCAGGAGGATCGAGTCGTCACGCCTCAGCTTC
EX765532       --> TTCCGATCGTAATCTCCCTCAGGAGGATCGAGTCGTCATGCCTCAGCTTC
FD548578       --> TTCCGATCGTAATCTCCCTCAGGAGGATCGAGTCGTCATGCCTCAGCTTC
FD981132       --> TTCCGATCGTAATCTCCCTCAGGAGGATCGAGTCGTCATGCCTCAGCTTC
EY899336       --> TTCCGATCGTAATCTCCCTCAGGAGGATCGAGTCGTCATGTCTCAGCTTC
EW731542       --> TTCCGACCGTAATCTCTCTCAGGAGGATTGAGTCGTCATGCCTCAGCTTC
FD580534       --> TTCTGATCGCAATCTCCCTCAGGAGGATCGAGTCGTCATGCCTCAGCTTC
FD972680       --> TTCCGATCGTAATCTCCCTCAGGAGGATCGAGTCGTCATGCCTCAGCTTC
EY900719       --> TTCCGATCGTAATCTCCCTCAGGAGGATCGAGTCGTCATGTCTCAGCTTC
EX754925       --> TTCTGATCGTAATCTCCCTCAGGAGGATCGAGTCGTCATGCCTCAGCTTC
FY442858       --> TTCCGATCGTAATCTCCCTCAGGAGGATCGAGTCGTCATGCCTCAGCTTC
FY444295       --> TTCCGATCGTAATCTCCCTCAGGAGGATCGAGTCGTCATGCCTCAGCTTC
EV569631       --> ..................................................
FD542435       --> ..................................................
FD963215       --> ..................................................
FD963595       --> ..................................................
FD535133       --> ..................................................

               401    -    451
UN22181        --> TTACTGAGTTCATGGTCGATATGAAGTGTGAGGGTTGTGTTAACGCCGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736800       <-- TTACTGAGTTCATGGTTGATATGAAGTGTGAGGGTTGTGTTAACGCCGTG  Raphanus sativus cv Rat-Tail Radish #3870
EX907429       <-- TTACTGAGTTCATGGTCGATATGAAGTGTGAGGGTTGTGTTAACGCCGTG  Raphanus sativus cv Rat-Tail Radish #3870
FD968526       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD584307       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY896194       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD959580       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX759133       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY430872       --> TTACTGAGTTCATGGTTGATATGAAGTGTGAGGGTTGTGTTAACGCCGTG  Raphanus sativus cv GSK3-1
FY435815       --> TTACTGAGTTCATGGTTGATATGAAGTGTGAGGGTTGTGTTAACGCCGTG  Raphanus sativus cv GSK3-1
EX903359       --> TTACTGAGTTCATGGTCGATATGAAGTGTGAGGGTTGTGTTAACGCCGTG  Raphanus sativus cv Rat-Tail Radish #3870
EX765532       --> TTACTGAGTTCATGGTCGATATGAAGTGTGAAGGTTGTGTTAACGCCGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548578       --> TTACTGAGTTCATGGTCGATATGAAGTGTGAAGGTTGTGTTAACGCCGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981132       --> TTACTGAGTTCATGGTCGATATGAAGTGTGAAGGTTGTGTTAACGCCGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY899336       --> TTACTGAGTTCATGGTCGATATGAAGTGTGACGGTTGTGTTAACGCCGTG  Raphanus raphanistrum subsp. maritimus
EW731542       --> TTACTGAGTTCATGGTTGATATGAAGTGTGAGGGTTGTGTTAACGCCGTG  Raphanus sativus cv Rat-Tail Radish #3870
FD580534       --> TTACTGAGTTCATGGTCGATATGAAGTGTGAGGGTTGTGTTAACGCCGTG  Raphanus sativus cv Rat-Tail Radish #3870
FD972680       --> TTGCTGAGTTCATGGTCGATATGAAGTGTGAGGGTTGTGTTAACGCCGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900719       --> TTACTGAGTTCATGGTCGATATGAAGTGTGACGGTTGTGTTAACGCCGTG  Raphanus raphanistrum subsp. maritimus
EX754925       --> TTACTGAGTTTATGGTGGACATGAAGTGTGAGGGTTGTGTTAACGCCGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY442858       --> TTACTGAGTTCATGGTTGATATGAAGTGTGAGGGTTGTGTTAACGCCGTG  Raphanus sativus cv GSK3-1
FY444295       --> TTACTGAGTTCATGGTTGATATGAAGTGTGAGGGTTGTGTTAACGCCGTG  Raphanus sativus cv GSK3-1
EV569631       --> ............................ggaaGGTTGTGTTAACGCCGTG  Raphanus raphanistrum subsp. landra
FD542435       --> ...........................................CGCCGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD963215       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD963595       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD535133       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               451    -    501
UN22181        --> AAGAACAAGTTAGAAACTGTTGAAGGGATTGAGAAAGTGGAGGTGGATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736800       <-- AAGAACAAGTTAGAAACTGTTGAAGGGATTGAGAAAGTGGAGGTAGATTT  Raphanus sativus cv Rat-Tail Radish #3870
EX907429       <-- AAGAACAAGTTAGAAACTGTTGAAGGGATTGAGAAAGTGGAGGTGGATTT  Raphanus sativus cv Rat-Tail Radish #3870
FD968526       <-- ..............AACTGTCGAAGGGATTGAGAAAGTGGAGGTGGATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD584307       <-- ......................AAGGGATTGAGAAAGTGGAGGTGGATTT  Raphanus sativus cv Rat-Tail Radish #3870
EY896194       <-- ..........................................GTGGATTT  Raphanus raphanistrum subsp. maritimus
FD959580       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX759133       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY430872       --> AAGAGCAAGTTAGAAACTGTTGAAGGGATTGAGAAAGTGGAGGTGGATTT  Raphanus sativus cv GSK3-1
FY435815       --> AAGAGCAAGTTAGAAACTGTTGAAGGGATTGAGAAAGTGGAGGTGGATTT  Raphanus sativus cv GSK3-1
EX903359       --> AAGAACAAGTTAGAAACTGTTGAAGGGATTGAGAAAGTGGAGGTGGATTT  Raphanus sativus cv Rat-Tail Radish #3870
EX765532       --> AAGAGCAAGTTAGAAACTGTTGAAGGGATTGAGAAAGTGGAGGTGGATTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548578       --> AAGAGCAAGTTAGAAACTGTTGAAAGGATTGAGAAAGTGGAGGTGGATTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981132       --> AAGAGCAAGTTAGAAACTGTTGAAGGGATTGAGAAAGTGGAGGTGGATTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY899336       --> AAGAACAAGTTAGAAACTGTTGAAGGAATTGAGAAAGTGGAGGTGGATTT  Raphanus raphanistrum subsp. maritimus
EW731542       --> AAGAACAAGTTAGAAACTGTTGAAGGGATTGAGAAAGTGGAGGTAGATTT  Raphanus sativus cv Rat-Tail Radish #3870
FD580534       --> AAGAACAAGTTAGAAACTGTTGAAGGGATTGAGAAAGTGGAGGTGGATTT  Raphanus sativus cv Rat-Tail Radish #3870
FD972680       --> AAGAACAAGTTAGAAACTGTCGAAGGGATTGAGAAAGTGGAGGTGGATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900719       --> AAGAACAAGTTAGAAACTGTTGAAGGAATTAAGAAAGTGGAGGTGGATTT  Raphanus raphanistrum subsp. maritimus
EX754925       --> AAGAACAAGTTAGAAACTGTTGAAGGGATTGAGAAAGTGGAGGTGGATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY442858       --> AAGAGCAAGTTAGAAACTGTTGAAGGGATTGAGAAAGTGGAGGTGGATTT  Raphanus sativus cv GSK3-1
FY444295       --> AAGAGCAAGTTAGAAACTGTTGAAGGGATTGAGAAAGTGGAGGTGGATTT  Raphanus sativus cv GSK3-1
EV569631       --> AAGAGCAAGTTAGAAACTGTTGAAGGGATTGAGAAAGTGGAGGTGGATTT  Raphanus raphanistrum subsp. landra
FD542435       --> AAGAACAAGTTAGAAACTGTTGAAGGGATTGAGAAAGTGGAGGTGGATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD963215       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD963595       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD535133       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               501    -    551
UN22181        --> GGCTAACCAAGTTGTGAGGATACTTGGATCTTCTCCTGTTAAGGCTATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736800       <-- GGCTAACCAAGTTGTGAGGATACTTGGATCTTCTCCTGTTAAGGCTATGA  Raphanus sativus cv Rat-Tail Radish #3870
EX907429       <-- GGCTAACCAAGTTGTGAGGATACTTGGATCTTCTCCTGTTAAGGCTATGA  Raphanus sativus cv Rat-Tail Radish #3870
FD968526       <-- GGCTAACCAAGTTGTGAGGATACTTGGTTCTTCTCCTGTTAAGGCTATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD584307       <-- GGCTAACCAAGTTGTGAGGATACTTGGATCTTCTCCTGTTAAGGCTATGA  Raphanus sativus cv Rat-Tail Radish #3870
EY896194       <-- GGCTAACCAAGTTGTGAGGATACTTGGATCTTCTCCTGTTAAGACTATGA  Raphanus raphanistrum subsp. maritimus
FD959580       <-- ........................gGGATCTTCTCCTGTTAAGACTATGA  Raphanus raphanistrum subsp. maritimus
EX759133       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY430872       --> GGCTAACCAAGTTGTGAGGATACTTGGATCTTCTCCTGTTAAGGCTATGA  Raphanus sativus cv GSK3-1
FY435815       --> GGCTAACCAAGTTGTGAGGATACTTGGATCTTCTCCTGTTAAGGCTATGA  Raphanus sativus cv GSK3-1
EX903359       --> GGCTAACCAAGTTGTGAGGATACTTGGATCTTCTCCTGTTAAGGCTATGA  Raphanus sativus cv Rat-Tail Radish #3870
EX765532       --> GGCTAACCAAGTTGTGAGGATACTTGGATCTTCTCCTGTTAAGGCTATGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548578       --> GGCTA.............................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981132       --> GGCTAACCAAGTTGTGAGGATACTTGGATCTTCTCCTGTTAAGGCTATGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY899336       --> GGCTAACCAAGTTGTGAGGATACTTGGATCTTCTCCTGTTAAGACTATGA  Raphanus raphanistrum subsp. maritimus
EW731542       --> GGCTAACCAAGTTGTGAGGATACTTGGATCTTCTCCTGTTAAGGCTATGA  Raphanus sativus cv Rat-Tail Radish #3870
FD580534       --> GGCTAACCAAGTTGTGAGGATACTTGGATCTTCTCCTGTTAAGGCTATGA  Raphanus sativus cv Rat-Tail Radish #3870
FD972680       --> GGCTAACCAAGTTGTGAGGATACTTGGTTCTTCTCCTGTTAAGGCTATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900719       --> GGCTAACCAAGTTGTGAGGATACTTGGATCTTCTCCTGTTAAGACTATGA  Raphanus raphanistrum subsp. maritimus
EX754925       --> GGCTAACCAAGTTGTGAGGATACTTGGATCTTCTCCTGTTAAGGCTATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY442858       --> GGCTAACCAAGTTGTGAGGATACTTGGATCTTCTCCTGTTAAGGCTATGA  Raphanus sativus cv GSK3-1
FY444295       --> GGCTAACCAAGTTGTGAGGATACTTGGATCTTCTCCTGTTAAGGCTATGA  Raphanus sativus cv GSK3-1
EV569631       --> GGCTAACCAAGTTGTGAGGATACTTGGATCTTCCCCTGTTAAGGCTATGA  Raphanus raphanistrum subsp. landra
FD542435       --> GGCTAACCAAGTTGTGAGGATACTTGGTTCTTCTCCTGTTAAGGCTATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD963215       --> ........................gGGATCTTCTCCTGTTAAGACTATGA  Raphanus raphanistrum subsp. maritimus
FD963595       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD535133       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               551    -    601
UN22181        --> CTCAAGCTTTGGAGCTAACCGGTCGTAAAGCTCGTTTGATTGGCCAAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736800       <-- CTCAAGCTTTGGAGCTAACCGGTCGTAAAGCCCGTTTGATTGGCCAAGGT
EX907429       <-- CTCAAGCTTTAGAGCAAACCGGTCGTAAAGCTCGTTTGATTGGCCAAGGT
FD968526       <-- CTCAAGCTTTGGAGCTAACCGGTCGTAAAGCTCGTTTGATTGGCCAAGGT
FD584307       <-- CTCAAGCTTTAGAGCAAACCGGTCGTAAAGCTCGTTTGATTGGCCAAGGT
EY896194       <-- CTCAAGCTTTGGAGCTAACCGGTCGTAAAGCTCGTTTGATTGGCCAAGGT
FD959580       <-- CTCAAGCTTTGGAGCTAACCGGTCGTAAAGCTCGTTTGATTGGCCAAGGT
EX759133       <-- ..................................................
FY430872       --> CTCAAGCTTTGGAGCTAACCGGTCGTAAAGCTCGTTTGATTGGCCAAGGT
FY435815       --> CTCAAGCTTTGGAGCTAACCGGTCGTAAAGCTCGTTTGATTGGCCAAGGT
EX903359       --> CTCAAGCTTTAGAGCAAACCGGTCGTAAAGCTCGTTTGATTGGCCAAGGT
EX765532       --> CTCAAGCTTTGGAGCTAACCGGTCGTAAAGCTCGTTTGATTGGCCAAGGT
FD548578       --> ..................................................
FD981132       --> CTCAAGCTTTGGAGCTAACCGGTCGTAAAGCTCGTTTGATTGGCCAAGGT
EY899336       --> CTCAAGCTTTGGAGCTAACCGGTCGTAAAGCTCGTTTGATTGGCCAAGGT
EW731542       --> CTCAAGCTTTGGAGCTAACCGGTCGTAAAGCCCGTTTGATTGGCCAAGGT
FD580534       --> CTCAAGCTTTAGAGCAAACCGGTCGTAAAGCTCGTTTGATTGGCCAAGGT
FD972680       --> CTCAAGCTTTGGAGCTAACCGGTCGTAAAGCTCGTTTGATTGGCCAAGGT
EY900719       --> CTCAAGCTTTGGAGCTAACCGGTCGTAAAGCTCGTTTGATTGGCCAAGGT
EX754925       --> CTCAAGCTTTAGAGCAAACCGGTCGTAAAGCTCGTTTGATTGGCCAAGGT
FY442858       --> CTCAAGCTTTGGAGCTAACCGGTCGTAAAGCTCGTTTGATTGGCCAAGGT
FY444295       --> CTCAAGCTTTGGAGCTAACCGGTCGTAAAGCTCGTTTGATTGGCCAAGGT
EV569631       --> CTCAAGCTTTGGAGCAAACCGGTCGTAAAGCTCGTTTGATTGGCCAAGGT
FD542435       --> CTCAAGCTTTGGAGCTAACCGGTCGTAAAGCTCGTTTGATTGGCCAAGGT
FD963215       --> CTCAAGCTTTGGAGCTAACCGGTCGTAAAGCTCGTTTGATTGGCCAAGGT
FD963595       --> ..................................................
FD535133       --> ..................................................

               601    -    651
UN22181        --> GTTCC-TCAAGATTTCTTGGTCTCTGCTGCAGTGGCGGAGTTCAAAGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736800       <-- GTTCC-TCAAGATTTCTTGGTCTCGGCTGCAGTGGCGGAGTTCAAAGGTC  Raphanus sativus cv Rat-Tail Radish #3870
EX907429       <-- GTTCC-TCAAGATTTCTTGGTCTCTGCTGCAGTGGCGGAGTTCAAGGGTC  Raphanus sativus cv Rat-Tail Radish #3870
FD968526       <-- GTTCC-TCAAGATTTCTTGGTCTCGGCTGCAGTGGCGGAGTTCAAAGGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD584307       <-- GTTCC-TCAAGATTTCTTGGTCTCTGCTGCAGTGGCGGAGTTCAAAGGTC  Raphanus sativus cv Rat-Tail Radish #3870
EY896194       <-- GTTCC-TCAAGATTTCTTGGTCTCTGCTGCAGTGGCGGAGTTCAAAGGTC  Raphanus raphanistrum subsp. maritimus
FD959580       <-- GTTCC-TCAAGATTTCTTGGTCTCTGCTGCAGTGGCGGAGTTCAAAGGTC  Raphanus raphanistrum subsp. maritimus
EX759133       <-- ........................gGCTGCAGTGGCGGAGTTCAAAGGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FY430872       --> GTTCC-TCAAGATTTCTTGGTCTCTGCTGCAGTGGCGGAGTTCAAAGGTC  Raphanus sativus cv GSK3-1
FY435815       --> GTTCCCTCAAGATTTCTTGGTCTCTGCTGCAGTGGCGGAGTTCAAAGGTC  Raphanus sativus cv GSK3-1
EX903359       --> GTTCC-TCAAGATTTCTTGGTCTCTGCTGCAGTGGCGGAGTTCAAGGGTC  Raphanus sativus cv Rat-Tail Radish #3870
EX765532       --> GTTCC-TCAAGATTTCTTGGTCTCTGCTGCAGTGGCGGAGTTCAAAGGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548578       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981132       --> GTTCC-TCAAGATTTCTTGGTCTCTGCTGCAGTGGCGGAGTTCAAAGGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY899336       --> GTTCC-TCAAGATTTCTTGGTCTCTGCTGCAGTGGCGGAGTTCAAAGGTC  Raphanus raphanistrum subsp. maritimus
EW731542       --> GTTCC-TCAAGATTTCTTGGTCTCGGCTGCAGTGGCGGAGTTCAAAGGTC  Raphanus sativus cv Rat-Tail Radish #3870
FD580534       --> GTTCC-TCAAGATTTCTTGGTCTCTGCTGCAGTGGCGGAGTTCAAAGGTC  Raphanus sativus cv Rat-Tail Radish #3870
FD972680       --> GTTCC-TCAAGATTTCTTGGTCTCGGCTGCAGTGGCGGAGTTCAAAGGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900719       --> GTTCC-TCAAGATTTCTTGGTCTCTGCTGCAGTGGCGGAGTTCAAAGGTC  Raphanus raphanistrum subsp. maritimus
EX754925       --> GTTCC-TTAAGATTTCTTGGTCTCGGCTGCAGTGGCGGAGTTCAAAGGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FY442858       --> GTTCC-TCAAGATTTCTTGGTCTCTGCTGCAGTGGCGGAGTTCAAAGGTC  Raphanus sativus cv GSK3-1
FY444295       --> GTTCC-TCAAGATTTCTTGGTCTCTGCTGCAGTGGCGGAGTTCAAAGGTC  Raphanus sativus cv GSK3-1
EV569631       --> GTTCC-TCAAGATTTCTTGGTCTCGGCTGCAGTGGCGGAGTTCAAAGGTC  Raphanus raphanistrum subsp. landra
FD542435       --> GTTCC-TCAAGATTTCTTGGTCTCGGCTGCAGTGGCGGAGTTCAAAGGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD963215       --> GTTCC-TCAAGATTTCTTGGTCTCTGCTGCAGTGGCGGAGTTCAAAGGTC  Raphanus raphanistrum subsp. maritimus
FD963595       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD535133       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               651    -    701
UN22181        --> CAGACATCTTTGGAGTGGTAAGGTTTGCTCAGGTCAGTATGGAGCTTGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736800       <-- CAGACATCTTTGGAGTGGTAAGGTTTGCTCAGGTCAGTATGGAGCTTGCG  Raphanus sativus cv Rat-Tail Radish #3870
EX907429       <-- CAGACATCTTTGGAGTGGTAAGGTTTGCTCAGGTCAGTATGGAGCTTGCG  Raphanus sativus cv Rat-Tail Radish #3870
FD968526       <-- CAGACATCTTTGGGGTGGTAAGGTTTGCTCAGGTCAGTATGGAGCTTGCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD584307       <-- CAGACATCTTTGGAGTGGTAAGGTTTGCTCAGGTCAGTATGGAGCTTGCG  Raphanus sativus cv Rat-Tail Radish #3870
EY896194       <-- CAGACATCTTTGGGGTGGTAAGGTTTGCTCAGGTCAGTATGGAGCTTGCG  Raphanus raphanistrum subsp. maritimus
FD959580       <-- CAGACATCTTTGGGGTGGTAAGGTTTGCTCAGGTCAGTATGGAGCTTGCG  Raphanus raphanistrum subsp. maritimus
EX759133       <-- CAGACATCTTTGGAGTGGTAAGGTTTGCTCAGGTCAGTATGGAGCTTGCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY430872       --> CAGACATCTTTGGAGTGGTAAGGTTTGCTCAGGTCAGTATGGAGCTTGCG  Raphanus sativus cv GSK3-1
FY435815       --> CAGACATC..........................................  Raphanus sativus cv GSK3-1
EX903359       --> CAGACATCTTTGGAGTGGTAAGGTTTGCTCAGGTCAGTATGGAGCTTGCG  Raphanus sativus cv Rat-Tail Radish #3870
EX765532       --> CAGACATCTTTGGAGTGGTAAGGTTTGCTCAG-TCAGTATGGAGCTTGCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548578       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981132       --> CAGACATCTTTGGAGTGGTAAAGTTTGCTCAG-TCAGTATGGAGCTTGCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY899336       --> CAGACATCTTTGGGGTGGTAAGGTTTGCTCAGGTCAGTATGGAGCTTGCG  Raphanus raphanistrum subsp. maritimus
EW731542       --> CAGACATCTTTGGAGTGGTAAGGTTTGCTCAGGTCAGTATGGAGCTTGCG  Raphanus sativus cv Rat-Tail Radish #3870
FD580534       --> CAGACATCTTTGGAGTGGTAAGGTTTGCTCAGGTCAGTATGGAGCTTGCG  Raphanus sativus cv Rat-Tail Radish #3870
FD972680       --> CAGACATCTTTGGGGTGGTAAGGTTTGC......................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900719       --> CAGACATCTTTGGGGTGGTAAGGTTTGCTCAGGTCAGTATGGAGCTTGCG  Raphanus raphanistrum subsp. maritimus
EX754925       --> CAGACATCTTTGGAGTGGTAAGGTTTGCTCAGGTCAGTATGGAGCTTGCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY442858       --> CAGACATCTTTGGAGTGGTAAGGTTTGCTCAGGTCAGTATGGAGCTTGCG  Raphanus sativus cv GSK3-1
FY444295       --> CAGACATCTTTGGAGTGGTAAGGTTTGCTCAGGTCAGTATGGAGCTTGCG  Raphanus sativus cv GSK3-1
EV569631       --> CAGACATCTTTGGAGTGGTGAGATTTGCTCAGGTCAGTATGGAGCTTGCG  Raphanus raphanistrum subsp. landra
FD542435       --> CAGACATCTTTGGGGTGGTAAGGTTTGCTCAGGTCAGTATGGAGCTTGCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD963215       --> CAGACATCTTTGGGGTGGTAAGGTTTGCTCAGGTCAGTATGGAGCTTGCG  Raphanus raphanistrum subsp. maritimus
FD963595       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD535133       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               701    -    751
UN22181        --> AGAATCGAAGCCAACTTTACTGGCTTGTCTCCCGGGAAACACAGCTGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736800       <-- AGAATCGAAACCAACTTTACTGGCTTGTCTCCCGGGAAACACAGCTGGTG  Raphanus sativus cv Rat-Tail Radish #3870
EX907429       <-- AGAATCGAAGCCAACTTTACTGGCTTGTCTCCCGGGAAACACAGCTGGTG  Raphanus sativus cv Rat-Tail Radish #3870
FD968526       <-- AGAATCGAAGCCAGCTTTACCGGTTTGTCTCCCGGGAAACACAGCTGGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD584307       <-- AGAATCGATGCCAACTTTACTGGCTTGTCTCCCGGGAAACACAGCTGGTG  Raphanus sativus cv Rat-Tail Radish #3870
EY896194       <-- AGAATCGAAGCCAACTTTACTGGTTTGTCTCCCGGGAAACACAGCTGGTG  Raphanus raphanistrum subsp. maritimus
FD959580       <-- AGAATCGAAGCCAACTTTACTGGTTTGTCTCCCGGGAAACACAGCTGGTG  Raphanus raphanistrum subsp. maritimus
EX759133       <-- AGAATCGAAGCCAACTTTACTGGTTTGTCTCCCGGGAAACACAGCTGGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY430872       --> AGAATCGAAGCCAACTTTACTGGCTTGTCTCCCGGGAAACACAGCTGGTG  Raphanus sativus cv GSK3-1
FY435815       --> ..................................................  Raphanus sativus cv GSK3-1
EX903359       --> AGAATCGAAGCCAACTTTACTGGCTTGTCTCCCGGGAAACACAGCTGGTG  Raphanus sativus cv Rat-Tail Radish #3870
EX765532       --> AGAATCGAAGCCAACTTTACTGGCTTGTCTCCCGGGAAACACAGCTGGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548578       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981132       --> AGAATCGAAGCCAACTTTACTGGCTTGTCTCCCGGGAAACACAGCTGGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY899336       --> AGAATCGAAGCCAACTTTACTGGTTTGTCTCCCGGGAAACACAGCTGGTG  Raphanus raphanistrum subsp. maritimus
EW731542       --> AGAATCGAAACCAACTTTACTGGCTTGTCTCCCGGGAAACACAGCTGGTG  Raphanus sativus cv Rat-Tail Radish #3870
FD580534       --> AGAATCGATGCCAACTTTACTGGCTTGTCTCCCGGGAAACACAGCTGGTG  Raphanus sativus cv Rat-Tail Radish #3870
FD972680       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900719       --> AGAATCGAAGCCAACTTTACTGGTTTGTCTCCCGGGAAACACAGCTGGTG  Raphanus raphanistrum subsp. maritimus
EX754925       --> AGAATCGAAGCCAACTTTACTGGTTTGTCTCCCGGGAAACACAGCTGGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY442858       --> AGAATCGAAGCCAACTTTACTGGCTTGTCTCCCGGGAAACACAGCTGGTG  Raphanus sativus cv GSK3-1
FY444295       --> AGAATCGAAGCCAACTTTACTGGCTTGTCTCCCGGGAAACACAGCTGGTG  Raphanus sativus cv GSK3-1
EV569631       --> AGAATCGAAGCCAACTTTACTGGTTTGTCTCCCGGAAAACACAGCTGGTG  Raphanus raphanistrum subsp. landra
FD542435       --> AGAATCGAAGCCAGCTTTACCGGTTTGTCTCCCGGGAAACACAGCTGGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD963215       --> AGAATCGAAGCCAACTTTACTGGTTTGTCTCCCGGGAAACACAGCTGGTG  Raphanus raphanistrum subsp. maritimus
FD963595       --> ....................gggtTTGTCTCCCGGAAAACACAGCTGGTG  Raphanus raphanistrum subsp. maritimus
FD535133       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               751    -    801
UN22181        --> TATCAACGAGTATGGTGATCTCACAAACGGAGCAGCTAGCACCGGGAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736800       <-- TATCAACGAGTATGGTGATCTCACAAACGGAGCAGCTAGCACCGGGAACT  Raphanus sativus cv Rat-Tail Radish #3870
EX907429       <-- TATCAACGAGTATGGTGATCTCACAAACGGAGCAGCTAGCACCGGGAACT  Raphanus sativus cv Rat-Tail Radish #3870
FD968526       <-- TATCAACGAGTATGGTGATCTCACAAACGGAGCAGCTAGCACCGGGAACT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD584307       <-- TATCAACGAGTATGGTGATCCCACAAACGGAGCAGCTAGCACCGGGAACT  Raphanus sativus cv Rat-Tail Radish #3870
EY896194       <-- TATCAACGAGTATGGTGATCTCACAAACGGAGCAGCCAGCACCGGGAACT  Raphanus raphanistrum subsp. maritimus
FD959580       <-- TATCAACGAGTATGGTGATCTCACAAACGGAGCGGCCAGCACCGGGAACT  Raphanus raphanistrum subsp. maritimus
EX759133       <-- TATCAACGAGTATGGTGATTTCACAAACGGAGCAGCTAGCACCGGGAACT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY430872       --> TATCAACGAGTATGGTGATCTCACAAACGGAGCAGCTAGCACCGGGAACT  Raphanus sativus cv GSK3-1
FY435815       --> ..................................................  Raphanus sativus cv GSK3-1
EX903359       --> TATCAACGAGTATGGTGATCTCACAAACGGAGCAGCTAGCACCGGGAACT  Raphanus sativus cv Rat-Tail Radish #3870
EX765532       --> TATCAACGAGTATGGTGATCTCACAAACGGAGCAGCTAGCACTGGGA-CT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548578       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981132       --> TATCAACGAGTATGGTGATCTCACAA-CGGAGCAGCTAGCACTGGGAACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY899336       --> TATCAACGAGTATGGTGATCTCACAAACGGAGCAG...............  Raphanus raphanistrum subsp. maritimus
EW731542       --> TATCAACGAGTATGGTGATCTCACAAACGGAGCAGCTAGCACCGGGAACT  Raphanus sativus cv Rat-Tail Radish #3870
FD580534       --> TATCAACGAGTATGGTGATCCCACAAACGGAGCAGCTAGCACCGGGAACT  Raphanus sativus cv Rat-Tail Radish #3870
FD972680       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900719       --> TATCAACGAGTATGGTGATCTCACAAACGGAGCAGCCAGCACCGGGAACT  Raphanus raphanistrum subsp. maritimus
EX754925       --> TATCAACGAGTATGGTGATCTCACAAACGGAGCAGCTAGCACCGGGAACT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY442858       --> TATCAACGAGTATGGTGATCTCACAAACGGAGCAGCTAGCACCGGGAACT  Raphanus sativus cv GSK3-1
FY444295       --> TATCAACGAGTATGGTGATCTCACAAACGGAGCAGCTAGCACCGGGAACT  Raphanus sativus cv GSK3-1
EV569631       --> TATCAACGAGTATGGTGATCTCACAAACGGAGCAGCCAGCACCGGGAACT  Raphanus raphanistrum subsp. landra
FD542435       --> TATCAACGAGTATGGTGATCTCACAAACGGAGCAGCTAGCACCGGGAACT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD963215       --> TATCAACGAGTATGGTGATCTCACAAACGGAGCGGCCAGCACCGGGAACT  Raphanus raphanistrum subsp. maritimus
FD963595       --> TATCAACGAGTATGGTGATCTCACGAACGGAGCAGCCAGCACCGGGAACT  Raphanus raphanistrum subsp. maritimus
FD535133       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               801    -    851
UN22181        --> TGTACAACCCACTTCAAGATCATACCAACACAGAGCCATTGGGGGACCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736800       <-- TGTACAACCCACTTCAAGATCATACCGACACAGAGCCATTGGGGGACCTG  Raphanus sativus cv Rat-Tail Radish #3870
EX907429       <-- TGTACAACCCACTTCAAGATCATACCAACACAGAGCCATTGGGGGACCTG  Raphanus sativus cv Rat-Tail Radish #3870
FD968526       <-- TGTACAACCCACTTCAAGATCATACCAACACAGAGCCATTGGGGGACCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD584307       <-- TGTACAACCCACTTCAAGATCATACCAACACAGAGCCATTGGGGGACCTG  Raphanus sativus cv Rat-Tail Radish #3870
EY896194       <-- TGTACAACCCACTTCAAGATCATACCAACACAGAGCCATTGGGGGACCTG  Raphanus raphanistrum subsp. maritimus
FD959580       <-- TGTACAACCCACTTCAAGATCATACCAACACAGAGCCATTGGGGGACCTG  Raphanus raphanistrum subsp. maritimus
EX759133       <-- TGTACAACCCACTTCAAGATCATACCAACACAGAGCCATTGGGGGACCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY430872       --> TGTACAACCCACTTCAAGATCATACCAACACAGAGCCATTGGGGGACCTG  Raphanus sativus cv GSK3-1
FY435815       --> ..................................................  Raphanus sativus cv GSK3-1
EX903359       --> TGTACA-CCCACTTCAAGATCATAC-AACACAGAGCCATTGGGGGAC-TG  Raphanus sativus cv Rat-Tail Radish #3870
EX765532       --> TGTACA-CCCACTTCA-GATCATAC-ATCACAGAGCC.............  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548578       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981132       --> TGTACA-CCCACTTCA-GATCATAC-ATCACAGAGCC.............  Raphanus raphanistrum subsp. raphanistrum (NY)
EY899336       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW731542       --> TGTACAACCCACTTCAAGATCATACCGACACAGAGCCATTGGGGGACCTG  Raphanus sativus cv Rat-Tail Radish #3870
FD580534       --> TGTACAACC-ACTTCAAGATCATACCAACACAGAGCCATTGGGGGACCTG  Raphanus sativus cv Rat-Tail Radish #3870
FD972680       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900719       --> TGTACAACCCACTTCAAGATCATACCAACACAGAGCCATTGGGGGACCTG  Raphanus raphanistrum subsp. maritimus
EX754925       --> TGTACA-CCCACTTCAAGATCATACCAACACAGAGCCATTGGGGGAC-TG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY442858       --> TGTACAACCCACTTCAAGATCATACCAACACAGAGCCATTGGGGGACCTG  Raphanus sativus cv GSK3-1
FY444295       --> TGTACAACCCACTTCAAGATCATACCAACACAGAGCCATTGGGGGACCTG  Raphanus sativus cv GSK3-1
EV569631       --> TGTACAATCCACTTCAAGATCATACCAACACAGAGCCATTGGGGGACCTG  Raphanus raphanistrum subsp. landra
FD542435       --> TGTACAACCCACTTCAAGATCATACCAACACAGAGCCATTGGGGGACCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD963215       --> TGTACAACCCACTTCAAGATCATACCAACACAGAGCCATTGGGGGACCTG  Raphanus raphanistrum subsp. maritimus
FD963595       --> TGTACAATCCACTTCAAGATCATACCAACACAGAGCCATTGGGGGACCTG  Raphanus raphanistrum subsp. maritimus
FD535133       --> ................................agGCCATTGGGGGACCTG  Raphanus raphanistrum subsp. maritimus

               851    -    901
UN22181        --> GGAACACTAGAGGCAGACCAGAGCGGAGAGGCGTTTTACACGGGAAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736800       <-- GGAACACTAGAGGCAGACCAGAGCGGAGAGGCGTTTTACACGGGAAAGAA
EX907429       <-- GGAACACTAGAGGCAGACCAGAGCGGAGAGGCGTTTTACACGGGAAAGAA
FD968526       <-- GGAACACTAGAGGCAGACCAGAGCGGAGAGGCGTTTTACACGGGAAAGAA
FD584307       <-- GGAACACTAGAGGCAGACCAGAGCGGAGAGGCGTTTTACACGGGAAAGAA
EY896194       <-- GGAACACTAGAGGCAGACCAGAGCGGAGAGGCGTTTTACACGGGAAAGAA
FD959580       <-- GGAACACTAGAGGCAGACCAGAGCGGAGAGGCGTTTTGCACGGGAAAGAA
EX759133       <-- GGAACACTAGAGGCGGACCAGAGCGGAGAGGCGTTTTACACGGGAAAGAA
FY430872       --> G.................................................
FY435815       --> ..................................................
EX903359       --> GGA-CACTAGAG-CAGAC-AGAGCGGAGAG-CGTTTa.............
EX765532       --> ..................................................
FD548578       --> ..................................................
FD981132       --> ..................................................
EY899336       --> ..................................................
EW731542       --> GGAACACTAGAGGCAGACCAGAGCGGAGAGGCGTTTTACACGGGAAAGAA
FD580534       --> GGAACACT..........................................
FD972680       --> ..................................................
EY900719       --> GGAACACTAGAG-CAGACCAGAGCG.........................
EX754925       --> GGA-CACTAGAG-CGGA-CAGAGCGGAGAG-CGTTTaca...........
FY442858       --> GGAACACTAGAGGCAGACCAGAGCGGAGAGGCGTTTTACACGGGAAAGAA
FY444295       --> GGAACACTAGAGGCAGACCAGAGCGGAGAGGCGTTTTACACGGGAAAGAA
EV569631       --> GGAACACTAGAGGCAGATCGGAGTGGAGAGGCGTTTTACACGGGAAAGAA
FD542435       --> GGAACACTAGAGGCAGACCAGAGCGGAGAGGCGTTTTACACGGGAAAGAA
FD963215       --> GGAACACTAGAGGCAGACCAGAGCGGAGAGGCGTTTTGCACGGGAAAGAA
FD963595       --> GGAACACTAGAGGCAGATCAGAGTGGAGAGGCGTTTTACACGGGAAAGAA
FD535133       --> GGAACACTAGAGGCAGATCAGAGTGGAGAGGCGTTTTACACGGGAAAGAA

               901    -    951
UN22181        --> AGAGAAGCTCAAGGTTGCGGATCTAATAGGCCGAGCCGTGGTGGTCTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736800       <-- AGAGAAGCTCAAGGTTGCGGATCTAATAGGCCGAGCCGTGGTGGTCTACA
EX907429       <-- AGAGAAGCTCAAGGTTGCGGACCTAATAGGCCGAGCCGTGGTGGTCTACA
FD968526       <-- AGAGAAGCTCAAGGTTGCTGATCTAATAGGCCGAGCCGTGGTGGTTTACG
FD584307       <-- AGAGAAGCTCAAGGTTGCGGATCTAATAGGCCGAGCCGTGGTGGTCTACA
EY896194       <-- AGAGAAGCTCAAGGTTGCAGATTTAATAGGCCGAGCCGTGGTGGTCTACA
FD959580       <-- AGAGAAGCTCAAGGTTGCGGATCTAATAGGCCGAGCCGTGGTGGTCTACA
EX759133       <-- AGAGAAGCTCAAGGTTGCTGATTTAATAGGCCGAGCCGTGGTGGTCTACA
FY430872       --> ..................................................
FY435815       --> ..................................................
EX903359       --> ..................................................
EX765532       --> ..................................................
FD548578       --> ..................................................
FD981132       --> ..................................................
EY899336       --> ..................................................
EW731542       --> -GAGAAGCT.........................................
FD580534       --> ..................................................
FD972680       --> ..................................................
EY900719       --> ..................................................
EX754925       --> ..................................................
FY442858       --> AGAGAAGCTCAAGGTTGCGGATCTAATAGGCCGAGCCGTGGTGGTCTACA
FY444295       --> AGAGAAGCTCAAGGTTGCGGATCTAATAGGCCGAGCCGTGGTGGTCTA..
EV569631       --> AGAGAAGCTCAAGGTTGCGGATCTAATAGGCCGAGCCGTGGTGGTCTACA
FD542435       --> AGAGAAGCTCAAGGTTGCTGATCTAATAGGCCGAGCCGTGGTGGTCTACG
FD963215       --> AGAGAAGCTCAAGGTTGCGGATCTAATAGGCCGAGCCGTGGTGGTCTACA
FD963595       --> AGAGAAGCTCAAGGTTGCGGATCTAATAGGCCGAGCCGTGGTGGTCTACA
FD535133       --> AGAGAAGCTCAAGGTTGCGGATCTAATAGGCCGAGCCGTGGTGGTCTACA

               951    -   1001
UN22181        --> AGACAGAGGATAAGAACTCAGGCCCGGGATTGACAGCTGCAGTGATTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736800       <-- AGACAGAGGATAAGAACTCAGGCCAGGGATTGACAGCTGCAGTGATTGCT
EX907429       <-- AGACAGAGGATAAGAACTCAGGCCAGGGATTGACAGCTGCAGTGATTGCT
FD968526       <-- AGACAGAGGATAAGAACTCAGGCCCGGGATTGACAGCTGCAGTGATTGCT
FD584307       <-- AGACAGAGGATGAGAACTCAGGCCAGGGATTGACAGCTGCAGTGATTGCT
EY896194       <-- AGACAGAGGATAAGAACTCAGGCCCCGGATTGACAGCTGCAGTGATTGCT
FD959580       <-- AGACAGAGGATAAGAACTCAGGCCCCGGATTGACAGCTGCAGTGATTGCT
EX759133       <-- AGACAGAGGATAAGAACTCAGGCCCCGGATTGACTGCTGCAGTGATTGCT
FY430872       --> ..................................................
FY435815       --> ..................................................
EX903359       --> ..................................................
EX765532       --> ..................................................
FD548578       --> ..................................................
FD981132       --> ..................................................
EY899336       --> ..................................................
EW731542       --> ..................................................
FD580534       --> ..................................................
FD972680       --> ..................................................
EY900719       --> ..................................................
EX754925       --> ..................................................
FY442858       --> AGACAGAGGATAAGAACTCAGGCCAGGGATTGACAGCTGCAGTGATTGCT
FY444295       --> ..................................................
EV569631       --> AGACAGAGGATAAGAACTCAGGCCCGGGATTGACAGCTGCAGTGATTGCT
FD542435       --> AGACAGAGGATTAGAACTCAGGCCCGGGATTGACAGCTGCAGTGATTGCT
FD963215       --> AGACAGAGGATAAGAACTCAGGCCCCGGATTGACAGCTGCAGTGATTGCT
FD963595       --> AGACAGAGGATAAGAACTCAGGCCCGGGATTGACAGCTGCAGTGATTGCT
FD535133       --> AGACAGAGGATAAGAACTCAGGCCCGGGATTGACAGCTGCAGTGATTGCT

               1001   -   1051
UN22181        --> AGAAGCGCAGGAGTTGGAGAAAACTACAAGAAGCTTTGTACTTGTGATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736800       <-- AGAAGCGCAGGAGTTGGAGAAAACTACAAGAAGCTTTGTACTTGTGATGG
EX907429       <-- AGAAGCGCAGGAGTTGGAGAAAACTACAAGAAGCTTTGTACTTGTGATGG
FD968526       <-- AGAAGCGCAGGAGTTGGAGAAAACTACAAGAAGCTTTGTACTTGTGATGG
FD584307       <-- AGAAGCGCAGGAGTTGGAGAAAACTACAAGAAGCTTTGTACTTGTGATGG
EY896194       <-- AGAAGCGCAGGAGTTGGAGAAAACTACAAGAAGCTTTGTACTTGTGATGG
FD959580       <-- AGAAGCGCAGGAGTTGGAGAAAACTACAAGAAGCTTTGTACTTGTGATGG
EX759133       <-- AGAAGCGCAGGAGTTGGAGAAAACTACAAGAAGCTTTGTACTTGTGATGG
FY430872       --> ..................................................
FY435815       --> ..................................................
EX903359       --> ..................................................
EX765532       --> ..................................................
FD548578       --> ..................................................
FD981132       --> ..................................................
EY899336       --> ..................................................
EW731542       --> ..................................................
FD580534       --> ..................................................
FD972680       --> ..................................................
EY900719       --> ..................................................
EX754925       --> ..................................................
FY442858       --> AGAAGCGCAGGAGTTGGAGAAAACTACAAGAAGCTTTG............
FY444295       --> ..................................................
EV569631       --> AGAAGCGCAGGAGTTGGAGAAAACTACAAGAAGCTTTGTACTTGTGATGG
FD542435       --> AGAAGCGCAGGAGTTGGAGAAAACTACAAGAAGCTTTGTACTTGTGATGG
FD963215       --> AGAAGCGCAGGAGTTGGAGAAAACTACAAGAAGCTTTGTACTTGTGATGG
FD963595       --> AGAAGCGCAGGAGTTGGAGAAAACTACAAGAAGCTTTGTACTTGTGATGG
FD535133       --> AGAAGCGCGGGAGTTGGAGAAAACTACAAGAAGCTTTGTACTTGTGATGG

               1051   -   1101
UN22181        --> TACTGTCATTTGGG-AAGCTACAGACAGCGATTTCGTTAAGGTTTAATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736800       <-- TACTGTCATTTGGG-AAGCTACAGACAGCGATTTCGTTAAGGTTTAATGA  Raphanus sativus cv Rat-Tail Radish #3870
EX907429       <-- TACTGTCATTTGGG-GAGCTACAGACAGCGATTTCGTTAAGGTTTAATGA  Raphanus sativus cv Rat-Tail Radish #3870
FD968526       <-- TACTGTCATTTGGG-AAGCTACAGACAGCGATTTCGTTAAGGTTTAACGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD584307       <-- TACTGTCATTTGGG-AAGCTACAGACAGCGATTTCGTTAAGGTTTAATGA  Raphanus sativus cv Rat-Tail Radish #3870
EY896194       <-- TACTGTCATTTGGG-AAGCTACAAACAGCGATTTCGTTAAGGTTTAATAA  Raphanus raphanistrum subsp. maritimus
FD959580       <-- TACTGTCATTTGGG-AAGCTACAAACAGCGATTTCGTTAAGGTTTAATAA  Raphanus raphanistrum subsp. maritimus
EX759133       <-- TACTGTCATTTGGG-AAGCTACAGACAGCGATTTCGTTAAGGTTTAATAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY430872       --> ..................................................  Raphanus sativus cv GSK3-1
FY435815       --> ..................................................  Raphanus sativus cv GSK3-1
EX903359       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX765532       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548578       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981132       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY899336       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW731542       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD580534       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD972680       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900719       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX754925       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY442858       --> ..................................................  Raphanus sativus cv GSK3-1
FY444295       --> ..................................................  Raphanus sativus cv GSK3-1
EV569631       --> TACTGTCATTTGGGGAAGCTACAAACAGCGATTTCGTTAAGGTTTAATAA  Raphanus raphanistrum subsp. landra
FD542435       --> TACTGTCATTTGGG-AAGCTACAGACAGCGATTTCGTTAAGGTT-AATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD963215       --> TACTGTCATTTGGG-AAGCTACAAACAGCGATTTCGTTAAGGTTTAATAA  Raphanus raphanistrum subsp. maritimus
FD963595       --> TACTGTCATTTGGG-AAGCTACAAACAGCGATTTCGTTAAGGTTTAATAA  Raphanus raphanistrum subsp. maritimus
FD535133       --> TACTGTCATTTGGG-AAGCTACAAACAGCGATTTCGTTAAGGTTTAATAA  Raphanus raphanistrum subsp. maritimus

               1101   -   1151
UN22181        --> CCAATAAAGATATTATTGACACTAC---GTTACGTGTTGTATCCACTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736800       <-- CCAATAAAGATATTATTGACACTACTACTTTACGTGTTGTATCCACTTTA  Raphanus sativus cv Rat-Tail Radish #3870
EX907429       <-- CCAATAAAGATATTATTGACACTACTACTTTACGTGTTGTATCCACTTTA  Raphanus sativus cv Rat-Tail Radish #3870
FD968526       <-- CCAATAAAGATATTATTGACACTACTACTTTACGTGTTGTATCCACTTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD584307       <-- CCAATAAAGATATTATTGACACTACTACTTTACGTGTTGTATCCACTTTA  Raphanus sativus cv Rat-Tail Radish #3870
EY896194       <-- CCAATAAAGCTATTATTGACACTGC---GTTACGTGTTGTATCCATGTTA  Raphanus raphanistrum subsp. maritimus
FD959580       <-- CCAATAAAGCTATTATTGACACTGC---GTTACGTGTTGTATCCATGTTA  Raphanus raphanistrum subsp. maritimus
EX759133       <-- CCAATAAAGATATTGTTGACACTAC---ATTACGTGTTGTATCCACTTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY430872       --> ..................................................  Raphanus sativus cv GSK3-1
FY435815       --> ..................................................  Raphanus sativus cv GSK3-1
EX903359       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX765532       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548578       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981132       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY899336       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW731542       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD580534       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD972680       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900719       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX754925       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY442858       --> ..................................................  Raphanus sativus cv GSK3-1
FY444295       --> ..................................................  Raphanus sativus cv GSK3-1
EV569631       --> CCAATAAAGATATTATTG-CACTAC---GTTACGTGTTGTATCCACTTTA  Raphanus raphanistrum subsp. landra
FD542435       --> CCAATAAAGATATTATTGACACTACTACTTTACGTGTTGTATC.......  Raphanus raphanistrum subsp. raphanistrum (MS)
FD963215       --> CCAATAAAGCTATTATTGACACTGC---GTTACGTGTTGTATCCATGTTA  Raphanus raphanistrum subsp. maritimus
FD963595       --> CCAATAAAGATATTATTG-CACTAC---GTTACGTGTTGTATCCACTTTA  Raphanus raphanistrum subsp. maritimus
FD535133       --> CCAATAAAGATATTATTG-CACTAC---GTTACGTGTTGTATCCACTTTA  Raphanus raphanistrum subsp. maritimus

               1151   -   1201
UN22181        --> AGACTTTGTTTTGGATCAAAATCAAGACC-GTC-TTGAAAAAAA-TAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736800       <-- AGACTTTGTTTTGGATC.................................
EX907429       <-- AGACTTTGTTTTGGATCAAAATCAAGACC-GTC-TTtg............
FD968526       <-- AGACTTTGTTTTGGATCAAAATCAAGACC-GTC-TTG.............
FD584307       <-- AGACTTTGTTTTGGATCAAAATCAAGACC-GTCCTTGAAAAAA--TAAAA
EY896194       <-- AGACTTTGTTTTGGATCAAAATCAAGACCTGTC-TTGAAACAAA-TAAAA
FD959580       <-- AGACTTTGTTTTGGATCAAAATCAAGACCTGTC-TTG.............
EX759133       <-- AGACTTTGTTTTGGATCAAAATCAAGACC-GTC-TTGAc...........
FY430872       --> ..................................................
FY435815       --> ..................................................
EX903359       --> ..................................................
EX765532       --> ..................................................
FD548578       --> ..................................................
FD981132       --> ..................................................
EY899336       --> ..................................................
EW731542       --> ..................................................
FD580534       --> ..................................................
FD972680       --> ..................................................
EY900719       --> ..................................................
EX754925       --> ..................................................
FY442858       --> ..................................................
FY444295       --> ..................................................
EV569631       --> AGACTTTGCTTTGGATCAAAATCAAGACC-GTC-TTG.............
FD542435       --> ..................................................
FD963215       --> AGACTTTGTTTTGGATCAAAATCAAGACCTGTC-TTG.............
FD963595       --> AGACTTTGCTTTGGATCAAAATCAAGACC-GTC-TTG.............
FD535133       --> AGACTTTGCTTTGGATCAAAATCAAGACC-GTC-TTGAAAAAAAATAAAA

               1201   -   1251
UN22181        --> GCTTCTTGTATTGTACCAAACTCTGTTGTGTAGTGTCTTTAACGCTTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736800       <-- ..................................................
EX907429       <-- ..................................................
FD968526       <-- ..................................................
FD584307       <-- GCTTCTTGTATTGTACCAAACTCTGTTGTGTAGTGTCTTTAACGCTTTAA
EY896194       <-- GCTTCTTGTATTG.....................................
FD959580       <-- ..................................................
EX759133       <-- ..................................................
FY430872       --> ..................................................
FY435815       --> ..................................................
EX903359       --> ..................................................
EX765532       --> ..................................................
FD548578       --> ..................................................
FD981132       --> ..................................................
EY899336       --> ..................................................
EW731542       --> ..................................................
FD580534       --> ..................................................
FD972680       --> ..................................................
EY900719       --> ..................................................
EX754925       --> ..................................................
FY442858       --> ..................................................
FY444295       --> ..................................................
EV569631       --> ..................................................
FD542435       --> ..................................................
FD963215       --> ..................................................
FD963595       --> ..................................................
FD535133       --> GCTTCTTGTATTGTACC.................................

               1251   -   1301
UN22181        --> TAAGGTAAGTTTGAATTCATC
                   ~~~~~~~~~~~~~~~~~~~~~
EW736800       <-- .....................
EX907429       <-- .....................
FD968526       <-- .....................
FD584307       <-- TAAGGTAAGTTTGAATTCATC
EY896194       <-- .....................
FD959580       <-- .....................
EX759133       <-- .....................
FY430872       --> .....................
FY435815       --> .....................
EX903359       --> .....................
EX765532       --> .....................
FD548578       --> .....................
FD981132       --> .....................
EY899336       --> .....................
EW731542       --> .....................
FD580534       --> .....................
FD972680       --> .....................
EY900719       --> .....................
EX754925       --> .....................
FY442858       --> .....................
FY444295       --> .....................
EV569631       --> .....................
FD542435       --> .....................
FD963215       --> .....................
FD963595       --> .....................
FD535133       --> .....................