1 - 51
UN22230 --> GGAGGCAGATCAATAGAATTTAAAGAGGAAAAAGCAAAATAAAAAATAAG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776029 <-- ..................................................
FD977595 <-- ..................................................
EX776914 <-- ..................................................
FD554440 <-- ..................................................
FD544592 <-- ..................................................
EV547426 <-- ..................................................
EY896114 <-- ..................................................
FD566222 <-- ..................................................
FD566501 <-- ..................................................
FD981925 --> GGAGGCAGATCAATAGAATTTAAAGAGGAAAAAGCAAAATAAAAAATAAG
EX771969 --> ..................................................
EY900618 --> ..................................................
FD548398 --> ..................................................
FD558570 --> ..................................................
EV566514 --> ..................................................
EV548518 --> ..................................................
FD562646 --> ..................................................
FD562278 --> ..................................................
FY443764 --> ..................................................
FY442437 --> ..................................................
EV552525 --> ..................................................
EW723456 --> ..................................................
EX773067 --> ..................................................
51 - 101
UN22230 --> AGAAAAAGAAAAGTCTCTCTTTTTCTTTTCTCTCCCAGATTCTCTCTCTC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776029 <-- ..................tTTTTTCTTTTCTTTCCCAGATTCTCTCTCTC
FD977595 <-- ...................TTTTTCTTTTCTCTCCCAGATTCTCTCTCTC
EX776914 <-- ..................................................
FD554440 <-- ..................................................
FD544592 <-- ..................................................
EV547426 <-- ..................................................
EY896114 <-- ..................................................
FD566222 <-- ..................................................
FD566501 <-- ..................................................
FD981925 --> AGAAAAAGAAAAGTCTCTCTTTTTCTTTTCTCTCCCAGATTCTCTCTCTC
EX771969 --> ..................tTTTTTCTTTTCTTTCCCAGATTCTCTCTCTC
EY900618 --> ...................TTTTTCTTTTCTCTCCCAGATTCTCTCTCTC
FD548398 --> ...................TTTTTCTTTTCTCTCCCAGATTCTCTCTCTC
FD558570 --> ...................TTTTTCTTTTCTCTCCCAGATTCTCTCTCTC
EV566514 --> ........................CTTTTCTCTCCCAGATTCTCTCTCTC
EV548518 --> .................................gggAGATTCTCTCTCTC
FD562646 --> .................................gggAGATTCTCTCTCTC
FD562278 --> ..................................................
FY443764 --> ..................................................
FY442437 --> ..................................................
EV552525 --> ..................................................
EW723456 --> ..................................................
EX773067 --> ..................................................
101 - 151
UN22230 --> CTCCTGCGGATCATATTTTTTTCTTTTTCTTTCACTTTCCTTTGGTTTTC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776029 <-- CTCCTGCGGATCATATTTTTTTCCTTTTCTTTCACTTTCCTTTGGTTTTC Raphanus raphanistrum subsp. landra
FD977595 <-- CTCCTGCGGATCATATTTTTTTCTTTTTCTTTCACTTTCCTTTGGTTTTC Raphanus raphanistrum subsp. raphanistrum (NY)
EX776914 <-- ................TTTTTTCTTTTTCTTTCACTTTCCTTTGGTTTTC Raphanus raphanistrum subsp. landra
FD554440 <-- ................TTTTTTCTTTTTCTTTCACTTTCCCTTGGTTTTC Raphanus raphanistrum subsp. landra
FD544592 <-- .......................TTTTTCTTTCACTTTCCTTTGGTTTTC Raphanus raphanistrum subsp. raphanistrum (NY)
EV547426 <-- .................................................. Raphanus raphanistrum subsp. raphanistrum (NY)
EY896114 <-- .................................................. Raphanus raphanistrum subsp. maritimus
FD566222 <-- .................................................. Raphanus sativus var. oleiformis
FD566501 <-- .................................................. Raphanus sativus var. oleiformis
FD981925 --> CTCCTGCGGATCATATTTTTTTCTTTTTCTTTCACTTTCCTTTGGTTTTC Raphanus raphanistrum subsp. raphanistrum (NY)
EX771969 --> CTCCTGCGGATCATATTTTTTTCCTTTTCTTTCACTTTCCTTTGGTTTTC Raphanus raphanistrum subsp. landra
EY900618 --> CTCCTGCGGATCATATTTTTT-CTTTTTCTTTCACTTTCCTTTGGTTTTC Raphanus raphanistrum subsp. maritimus
FD548398 --> CTCCTGCGGATCATATTTTTTTCTTTTTCTTTCACTTTCCTTTGGTTTTC Raphanus raphanistrum subsp. raphanistrum (NY)
FD558570 --> CTCCTGCGGATCATATTTTTT-CTTTTTCTTTCACTTTCCCTTGGTTTTC Raphanus raphanistrum subsp. landra
EV566514 --> CTCCTGCGGATCATATTTTTT-CTTTTTCTTTCACTTTCCTTTGGTTTTC Raphanus raphanistrum subsp. landra
EV548518 --> CTCCTGCGGATCATATTTTTTTCTTTTTCTTTCACTTTCCTTTGGTTTTC Raphanus raphanistrum subsp. raphanistrum (NY)
FD562646 --> CTCCTGCGGATCATATTTTTTTCCTTTTCTTTCACTTTCCTTTGGTTTTC Raphanus sativus var. oleiformis
FD562278 --> ...............TTTTTTTCCTTTTCTTTCACTTTCCTTTGGTTTTC Raphanus sativus var. oleiformis
FY443764 --> .................................................. Raphanus sativus cv GSK3-1
FY442437 --> .................................................. Raphanus sativus cv GSK3-1
EV552525 --> .................................................. Raphanus raphanistrum subsp. raphanistrum (NY)
EW723456 --> .................................................. Raphanus sativus cv Early Scarlet Globe
EX773067 --> .................................................. Raphanus raphanistrum subsp. landra
151 - 201
UN22230 --> TCGGCGGCTTCATTCGAATCGTTTTTTCCTTTTTTTTT-CTCTCTCTAGG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776029 <-- TCGGCGGCTTCATTCGAATCGTTTTTTCCTTTTTTTTT-CTCTCTCTAGG
FD977595 <-- TCGGCGGCTTCATTCGAATCGTTTTTTCCTTTTTTTTT-CTCTCTCTAGG
EX776914 <-- TCGGCGGCTTCATTCGAATCGTTTTTTCCTTTTTTTT--CTCTCTCTAGG
FD554440 <-- TCGGCGGCTTCATTCGAATCGTTTTTTCCTTTTTT--T-CTCTCTCTAGG
FD544592 <-- TCGGCGGCTTCATTCGAATCGTTTTTTCCTTTTTTTTT-CTCTCTCTAGG
EV547426 <-- .......................................CTCTCTCTAGG
EY896114 <-- .......................................CTCTCTCTAGG
FD566222 <-- ...............................................AGG
FD566501 <-- ..................................................
FD981925 --> TCGGCGGCTTCATTCGAATCGTTTTTTCCTTTTTTTTT-CTCTCTCTAGG
EX771969 --> TCGGCGGCTTCATTCGAATCGTTTTTTCCTTTTTTTTT-CTCTCTCTAGG
EY900618 --> TCGGCGGCTTCATTCGAATCGTTTTTTCCTTTTTTTTTTCTCTCTCTAGG
FD548398 --> TCGGCGGCTTCATTCGAATCGTTTTTTCCTTTTTTTTT-CTCTCTCTAGG
FD558570 --> TCGGCGGCTTCATTCGAATCGTTTTTTCCTTTTTTT---CTCTCTCTAGG
EV566514 --> TCGGCGGCTTCATTCGAATCGTTTTTTCCTTTTTTTTTTCTCTCTCTAGG
EV548518 --> TCGGCGGCTTCATTCGAATCGTTTTTTCCTTTTTTTT--CTCTCTCTAGG
FD562646 --> TCGGCGGCTTCATTCGAATCGTTTTTTCCTCTTTTTTT-CTCTCTCTAGG
FD562278 --> TCGGCGGCTTCATTCGAATCGTTTTTTCCTCTTTTTTT-CTCTCTCTAGG
FY443764 --> ...............................TTTTTTT-CTCTCTCTAGG
FY442437 --> .................................TTTTT-CTCTCTCTAGG
EV552525 --> .......................................CTCTCTCTAGG
EW723456 --> .......................................CTCTCTCTAGG
EX773067 --> ..................................................
201 - 251
UN22230 --> GGGGTAAAGCTTCCTCCTTTCTGTAGACAGACGCCATGTCGGACAAAGGA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776029 <-- GGGGTAAAGCTTCCTCCTTTCTGTAGACAGACGCCATGTCGGACAAAGGA
FD977595 <-- GGGGTAAAGCTTCCTCCTTTCTGTAGACAGACGCCATGTCGGACAAAGGA
EX776914 <-- GGGGTAAAGCTTCCTCCTTTCTGTAGACAGACGCCATGTCGGACAAAGGA
FD554440 <-- GGGGTAAAGCTTCCTCCTTTCTGTAGACAGACGCCATGTCGGACAAAGGA
FD544592 <-- GGGGTAAAGCTTCCTCCTTTCTGTAGACAGACGCCATGTCGGACAAAGGA
EV547426 <-- GGGGTAAAGCTTCCTCCTTTCTGTAGACAGACGCCATGTCGGACAAAGGA
EY896114 <-- GGGGTAAAGCTTCCTCCTTTCTGTAGACAGACGCCATGTCGGACAAAGGA
FD566222 <-- GGGGTAAAGCTTCCTCCTTTCTGTAGACAGACGCCATGTCGGACAAAGGA
FD566501 <-- ..................................................
FD981925 --> GGGGTAAAGCTTCCTCCTTTCTGTAGACAGACGCCATGTCGGACAAAGGA
EX771969 --> GGGGTAAAGCTTCCTCCTTTCTGTAGACAGACGCCATGTCGGACAAAGGA
EY900618 --> GGGGTAAAGCTTCCTCCTTTCTGTAGACAGACGCCATGTCGGACAAAGGA
FD548398 --> GGGGTAAAGCTTCCTCCTTTCTGTAGACAG....................
FD558570 --> GGGGTAAAGCTTCCTCCTTTCTGTAGACAGACGCCATGTCGGACAAAGGA
EV566514 --> GGGGTAAAGCTTCCTCCTTTCTGTAGACAGACGCCATGTCGGACAAAGGA
EV548518 --> GGGGTAAAGCTTCCTCCTTTCTGTAGACAGACGCCATGTCGGACAAAGGA
FD562646 --> GGGGTAAAGCTTCCTCCTTTCTGTAGACAGACGCCATGTCGGACAAAGGA
FD562278 --> GGGGTAAAGCTTCCTCCTTTCTGTAGACAGACGCCATGTCGGACAAAGGA
FY443764 --> GGGGTAAAGCTTCCTCCTTTCTGTAGACAGACGCCATGTCGGACAAAGGA
FY442437 --> GGGGTAAAGCTTCCTCCTTTCTGTAGACAGACGCCATGTCGGACAAAGGA
EV552525 --> GGGGTAAAGCTTCCTCCTTTCTGTAGACAGACGCCATGTCGGACAAAGGA
EW723456 --> GGGGTAAAGCTTCCTCCTTTCTGTAGACAGACGCCATGTCGGACAAAGGA
EX773067 --> ..................................................
251 - 301
UN22230 --> CGTCCCTTACCCAAGTTTGGAGAATGGGATGTGAATGATCCAGCATCAGC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776029 <-- CGTCCCTTACCCAAGTTTGGAGAATGGGATGTGAATGATCCAGCATCAGC
FD977595 <-- CGTCCCTTACCCAAGTTTGGAGAATGGGATGTGAATGATCCAGCATCAGC
EX776914 <-- CGTCCCTTACCCAAGTTTGGAGAATGGGATGTGAATGATCCAGCATCAGC
FD554440 <-- CGTCCCTTACCCAAGTTTGGAGAATGGGATGTGAATGATCCAGCATCAGC
FD544592 <-- CGTCCCTTACCCAAGTTTGGAGAATGGGATGTGAATGATCCAGCATCAGC
EV547426 <-- CGTCCCTTACCCAAGTTTGGAGAATGGGATGTGAATGATCCAGCATCAGC
EY896114 <-- CGTCCCTTACCCAAGTTTGGAGAATGGGATGTGAATGATCCAGCATCAGC
FD566222 <-- CGTCCCTTACCCAAGTTTGGAGAATGGGATGTGAATGATCCAGCATCAGC
FD566501 <-- ........................TGGGATGTGAATGATCCAGCATCAGC
FD981925 --> CGTCCCTTACCCAAGTTTGGAGAATGGGATGTGAATGATCCAGCATCAGC
EX771969 --> CGTCCCTTACCCAAGTTTGGAGAATGGGATGTGAATGATCCAGCATCAGC
EY900618 --> CGTCCCTTACCCAAGTTTGGAGAATGGGATGTGAATGATCCAGCATCAGC
FD548398 --> ..................................................
FD558570 --> CGTCCCTTACCCAAGTTTGGAGAATGGGATGTGAATGATCCAGCATCAGC
EV566514 --> CGTCCCTTACCCAAGTTTGGAGAATGGGATGTGAATGATCCAGCATCAGC
EV548518 --> CGTCCCTTACCCAGGTTTGGAGAATGGGATGTGAATGATCCAGCATCAGC
FD562646 --> CGTCCCTTACCCAAGTTTGGAGAATGGGATGTGAATGATCCAGCATCAGC
FD562278 --> CGTCCCTTACCCAAGTTTGGAGAATGGGATGTGAATGATCCAGCATCAGC
FY443764 --> CGTCCCTTACCCAAGTTTGGAGAATGGGATGTGAATGATCCAGCATCAGC
FY442437 --> CGTCCCTTACCCAAGTTTGGAGAATGGGATGTGAATGATCCAGCATCAGC
EV552525 --> CGTCCCTTACCCAAGTTTGGAGAATGGGATGTGAATGATCCAGCATCAGC
EW723456 --> CGTCCCTTACCCAAGTTTGGAGAATGGGATGTGAATGATCCAGCATCAGC
EX773067 --> ..................................................
301 - 351
UN22230 --> AGAAGGTTTCACAGTCATATTCAACAAAGCTAGGGATGAGAAGAAGACCG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776029 <-- AGAAGGTTTCACAGTCATATTCAACAAAGCTAGGGATGAGAAGAAGACCG
FD977595 <-- AGAAGGTTTCACAGTCATATTCAACAAAGCTAGGGATGAGAAGAAGACCG
EX776914 <-- AGAAGGTTTCACAGTCATATTCAACAAAGCTAGGGATGAGAAGAAGACCG
FD554440 <-- AGAAGGTTTCACAGTCATATTCAACAAAGCTAGGGATGAGAAGAAGACCG
FD544592 <-- AGAAGGTTTCACAGTCATATTCAACAAAGCTAGGGATGAGAAGAAGACCG
EV547426 <-- AGAAGGTTTCACAGTCATATTCAACAAAGCTAGGGATGAGAAGAAGACCG
EY896114 <-- AGAAGGTTTCACAGTCATATTCAACAAAGCTAGGGATGAGAAGAAGACCG
FD566222 <-- AGAAGGTTTCACAGTCATATTCAACAAAGCTAGGGATGAGAAGAAGACCG
FD566501 <-- AGAAGGTTTCACAGTCATATTCAACAAAGCTAGGGATGAGAAGAAGACCG
FD981925 --> AGAAGGTTTCACAGTCATATTCAACAAAGCTAGGGATGAGAAGAAGACCG
EX771969 --> AGAAGGTTTCACAGTCATATTCAACAAAGCTAGGGATGAGAAGAAGACCG
EY900618 --> AGAAGGTTTCACAGTCATATTCAACAAAGCTAGGGATGAGAAGAAGACCG
FD548398 --> ..................................................
FD558570 --> AGAAGGTTTCACAGTCATATTCAACAAAGCTAGGGATGAGAAGAAGACCG
EV566514 --> AGAAGGTTTCACAGTCATATTCAACAAAGCTAGGGATGAGAAGAAGACCG
EV548518 --> AGAAGGTTTCACAGTCATATTCAACAAAGCTAGGGATGAGAAGAAGACCG
FD562646 --> AGAAGGTTTCACAGTCATATTCAACAAAGCTAGGGATGAGAAGAAGACCG
FD562278 --> AGAAGGTTTCACAGTCATATTCAACAAAGCTAGGGATGAGAAGAAGACCG
FY443764 --> AGAAGGTTTCACAGTCATATTCAACAAAGCTAGGGATGAGAAGAAGACCG
FY442437 --> AGAAGGTTTCACAGTCATATTCAACAAAGCTAGGGATGAGAAGAAGACCG
EV552525 --> AGAAGGTTTCACAGTCATATTCAACAAAGCTAGGGATGAGAAGAAGACCG
EW723456 --> AGAAGGTTTCACAGTCATATTCAACAAAGCTAGGGATGAGAAGAAGACCG
EX773067 --> ..................................................
351 - 401
UN22230 --> GTGGCAAGCCAGGATCGCCTGGTAAATCCACTGACGGTAATGCTAAATCC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776029 <-- GTGGCAAGCCAGGATCGCCTGGTAAATCCACTGACGGTAATGCTAAATCC
FD977595 <-- GTGGCAAGCCAGGATCGCCTGGTAAATCCACTGACGGTAATGCTAAATCC
EX776914 <-- GTGGCAAGCCAGGATCGCCTGGTAAATCCACTGACGGTAATGCTAAATCC
FD554440 <-- GTGGCAAGCCAGGATCGCCTGGTAAATCCACTGACGGTAATGCTAAATCC
FD544592 <-- GTGGCAAGCCAGGATCGCCTGGTAAATCCACTGACGGTAATGCTAAATCC
EV547426 <-- GTGGCAAGCCAGGATCGCCTGGTAAATCCACTGACGGTAATGCTAAATCC
EY896114 <-- GTGGCAAGCCAGGATCGCCTGGTAAATCCACTGACGGTAATGCTAAATCC
FD566222 <-- GTGGCAAGCCAGGATCGCCTGGTAAATCCACTGACGGTAATGCTAAATCC
FD566501 <-- GTGGCAAGCCAGGATCGCCTGGTAAATCCACTGACGGTAATGCTAAATCC
FD981925 --> GTGGCAAGCCAGGATCGCCTGGTAAATCCACTGACGGTAATGCTAAATCC
EX771969 --> GTGGCAAGCCAGGATCGCCTGGTAAATCCACTGACGGTAATGCTAAATCC
EY900618 --> GTGGCAAGCCAGGATCGCCTGGTAAATCCACTGACGGTAATGCTAAATCC
FD548398 --> ..................................................
FD558570 --> GTGGCAAGCCAGGATCGCCTGGTAAATCCACTGACGGTAATGCTAAATCC
EV566514 --> GTGGCAAGCCAGGATCGCCTGGTAAATCCACTGACGGTAATGCTAAATCC
EV548518 --> GTGGCAAGCCAGGATCGCCTGGTAAATCCACTGACGGTAATGCTAAATCC
FD562646 --> GTGGCAAGCCAGGATCGCCTGGTAAATCCACTGACGGTAATGCTAAATCC
FD562278 --> GTGGCAAGCCAGGATCGCCTGGTAAATCCACTGACGGTAATGCTAAATCC
FY443764 --> GTGGCAAGCCAGGATCGCCTGGTAAATCCACTGACGGTAATGCTAAATCC
FY442437 --> GTGGCAAGCCAGGATCGCCTGGTAAATCCACTGACGGTAATGCTAAATCC
EV552525 --> GTGGCAAGCCAGGATCGCCTGGTAAATCCACTGACGGTAATGCTAAATCC
EW723456 --> GTGGCAAGCCAGGATCGCCTGGTAAATCCACTGACGGTAATGCTAAATCC
EX773067 --> ..................................................
401 - 451
UN22230 --> GGAGGAGGAGATCCTAGTAAACCCCAGCCTAAAAAATGGCTCTGCTGCAT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776029 <-- GGAGGAGGAGATCCTAGTAAACCCCAGCCTAAAAAATGGCTTTGCTTCAT
FD977595 <-- GGAGGAGGAGATCCTAGTAAACCCCCCCCTAAAAAATGGCTCTGCTGCAT
EX776914 <-- GGAGGAGGAGATCCTAGTAAACCCCAGCCTAAAAAATGGCTTTGCTGCAT
FD554440 <-- GGAGGAGGAGACCCTAGTAAACCCCAGCCTAAAAAATGGCTTTGCTGCAT
FD544592 <-- GGAGGAGGAGATCCTAGTAAACCCCAGCCTAAAAAATGGCTCTGCTGCAT
EV547426 <-- GGAGGAGGAGATCCTAGTAAACCCCAGCCTAAAAAATGGCTTTGCTGCAT
EY896114 <-- GGAGGAGGAGATCCTAGTAAACCCCAGCCTAAAAAATGGCTTTGCTGCAT
FD566222 <-- GGAGGAGGAGATCCTAGTAAACCCCAGCCTAAAAAATGGCTTTGCTGCAT
FD566501 <-- GGAGGAGGAGATCCTAGTAAACCCCAGCCTAAAAAATGGCTTTGCTGCAT
FD981925 --> GGAGGAGGAGATCCTAGTAAACCCCACCCTAAAAAATGGCTCTGCTGCAT
EX771969 --> GGAGGAGGAGATCATAGTAAACCCCAGCCTAAAAAATGGCTCTGCTTCAT
EY900618 --> GGAGGAGGAGATCCTAGTAAACCCCAGCCTAAAAAATGGCTCTGCTGCAT
FD548398 --> ..................................................
FD558570 --> GGAGGAGGAGACCCTAGTAAACCCCAGCCTAAAAAATGGCTCTGCTGCAT
EV566514 --> GGAGGAGGAGATCCTAGTAAACCCCAGCCTAAAAAATGGCTCTGCTGCAT
EV548518 --> GGAGGAGGAGATCCTAGTAAACCCCAGCCTAAAAAATGGCTCTGCTGCAT
FD562646 --> GGAGGAGGAGATCCTAGTAAACCCCAGCCTAAAAAATGGCTCTGCTGCAT
FD562278 --> GGAGGAGGAGATCCTAGTAAACCCCAGCCTAAAAAATGGCTCTGCTGCAT
FY443764 --> GGAGGAGGAGATCCTAGTAAACCCCAGCCTAAAAAATGGCTCTGCTGCAT
FY442437 --> GGAGGAGGAGATCCTAGTAAACCCCAGCCTAAAAAATGGCTCTGCTGCAT
EV552525 --> GGAGGAGGAGATCCTAGTAAACCCCAGCCTAAAAAATGGCTCTGCTGCAT
EW723456 --> GGAGGAGGAGATCCTAGTAAACCCCAGCCTAAAAAATGGCTCTGCTGCAT
EX773067 --> ..................................................
451 - 501
UN22230 --> GCAGTCTCCAGCAGTGGACTCTTGACGGACACCAAGATTGGATTTGCTTG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776029 <-- GCAGTCTCCAGCAGTGGACTCTTGACGGACACCAAGATTGGATTTGCTTG
FD977595 <-- GCAGTCTCCAGCAGTGGACTCTTGACGGACACCAAGATTGGATTTGCTTG
EX776914 <-- GCAGTCTCCAGCAGTGGACTCTTGACGGACACAAAGATTGGATTTGCTTG
FD554440 <-- GCAGTCTCCAGCAGTGGACTCTTGACGGACACAAAGATTGGATTTGCTTG
FD544592 <-- GCAGTCTCCAGCAGTGGACTCTTGACGGACACCAAGATTGGATTTGCTTG
EV547426 <-- GCAGTCTCCAGCAGTGGACTCTTGACGGACACCAAGATTGGATTTGCTTG
EY896114 <-- GCAGTCTCCAGCAGTGGACTCTTGACGGACACCAAGATTGGATTTGCTTG
FD566222 <-- GCAGTTTCCAGCAGTGGACTCTTGACGGACACCAAGATTGGATTTGCTTG
FD566501 <-- GCAGTCTCCAGCAGTGGACTCTTGACGGACACCAAGATTGGATTTGCTTG
FD981925 --> GCAGTCTCCAGCAGTGGACTCTTGACGGACACCAAGATTGGATTTGCTTG
EX771969 --> GCAGTCTCCAGCAGTGGACTCTTGACGGACACCAAGATTGGATTTGCTTG
EY900618 --> GCAGTCTCCAGCAGTGGACTCTTGACGGACACCAAGATTGGATTTGCTTG
FD548398 --> ..................................................
FD558570 --> GCAGTCTCCAGCAGTGGACTCTTGACGGACACAAAGATTGGATTTGCTTG
EV566514 --> GCAGTCTCCAGCAGTGGACTCTTGACGGACACCAAGATTGGATTTGCTTG
EV548518 --> GCAGTCTCCAGCAGTGGACTCTTGACGGACACCAAGATTGGATTTGCTTG
FD562646 --> GCAGTCTCCAGCAGTGGACTCTTGACGGACACCAAGATTGGATTTGCTTG
FD562278 --> GCAGTCTCCAGCAGTGGACTCTTGACGGACACCAAGATTGGATTTGCTTG
FY443764 --> GCAGTCTCCAGCAGTGGACTCTTGACGGACACCAAGATTGGATTTGCTTG
FY442437 --> GCAGTCTCCAGCAGTGGACTCTTGACGGACACCAAGATTGGATTTGCTTG
EV552525 --> GCAGTCTCCAGCAGTGGACTCTTGACGGACACCAAGATTGGATTTGCTTG
EW723456 --> GCAGTCTCCAGCAGTGGACTCTTGACGGACACCAAGATTGGATTTGCTTG
EX773067 --> ..................................................
501 - 551
UN22230 --> CTGCCAAGTAAAAAAAGAAGAAGAAGGTTACATTGCTTAGACATGTAAAG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776029 <-- CTGCCAAGTAAAAAAAGAAGAAGAAGGTTACATTGCTTAGACATGTAAAG
FD977595 <-- CTGCCAAGTAAAAAAAGAAGA---AGGTTACATTGCTTAGACATGTAAAG
EX776914 <-- CTGCCAAGTAAAAAAAGAAGAAGAAGGTTACATTGCTTAGACATGTAAAG
FD554440 <-- CTGCCAAGTAAAAAAAGAAGAAGAAGGTTACATTGCTTAGACATGTAAAG
FD544592 <-- CTGCCAAGTAAAAAAAGAAGAAGAAGGTTACATTGCTTAGACATGTAAAG
EV547426 <-- CTGCCAAGTAAAAAAAGAAGAAGAAGGTTACATTGCTTAGACATGTAAAG
EY896114 <-- CTGCCAAGTAAAAAAAGAAGAAGAAGGTTACATTGCTTAGACATGTAAAG
FD566222 <-- CTGCCAAGTAAAAAAAGAAGAAGAAGGTTACATTGCTTAGACATGTAAAG
FD566501 <-- CTGCCAAGTAAAAAAAGAAGAAGAAGGTTACATTGCTTAGACATGTAAAG
FD981925 --> CTGCCAAGTAAAAAAAGAAGAAG---GTTACATTGCTTAGACATGTAAAG
EX771969 --> CTGCCAAGTAAAAAAAGAAGAAGAAGGTTACATTGCTTAGACATGTAAAG
EY900618 --> CTGCCAAGTAAAAAAAGAAGAAGAAGGTTACATTGCTTAGACATGTAAAG
FD548398 --> ..................................................
FD558570 --> CTGCCAAGTAAAAAAAGAAGAAGAAGGTTACATTGCTTAGACATGTAAAG
EV566514 --> CTGCCAAGTAAAAAAAGAAGAAGAAGGTTACATTGCTTAGACATGTAAAG
EV548518 --> CTGCCAAGTAAAAAAAGAAGAAGAAGGTTACATTGCTTAGACATGTAAAG
FD562646 --> CTGCCAAGTAAAAAAAGAAGAAGAAGGTTACATTGCTTAGACATGTAAAG
FD562278 --> CTGCCAAGTAAAAAAAGAAGAAGAAGGTTACATTGCTTAGACATGTAAAG
FY443764 --> CTGCCAAGTAAAAAAAGAAGAAGAAGGTTACATTGCTTAGACATGTAAAG
FY442437 --> CTGCCAAGTAAAAAAAGAAGAAGAAGGTTACATTGCTTAGACATGTAAAG
EV552525 --> CTGCCAAGTAAAAAAAGAAGAAGAAGGTTACATTGCTTAGACATGTAAAG
EW723456 --> CTGCCAAGTAAAAAAAGAAGAAGAAGGTTACATTGCTTAGACATGTAAAG
EX773067 --> ............................acatTTGCTTAGACATGTAAAG
551 - 601
UN22230 --> CAATGTTCTTCTTTTTT-ATGTTTTATT-GTCTTTCTTGAAAGTATCCAC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776029 <-- CAATGTTCTTCCTTTTT-ATGTTTTATT-GTCTTTCTTGAAAGTATCCAC
FD977595 <-- CAATGTTCTTCTTTTTT-ATGTCTTATT-GTCTTTCTTGAAAGTATCCAC
EX776914 <-- CAATGTTCTTCTTTTTT-ATGTTTTATT-GTCTTTCTTGAAAGTATCCAC
FD554440 <-- CAATGTTCTTCTTTTTTTATGTTTTATT-GTCTTTCTTGAAAGTATCCAC
FD544592 <-- CAATGTTCTTCTTTTTT-ATGTTTTATT-GTCTTTCTTGAAAGTATCCAC
EV547426 <-- CAATGTTCTTCTTTTTT-ATGTTTTATT-GCCTTTCTTGAAAGTATCCAC
EY896114 <-- CAATGTTCTTCTTTTTT-ATGTTTTATT-GTCTTTCTTGAAAGTATCCAC
FD566222 <-- CAATGTTTTTCTTTTTT-ATGTTTTATT-GTCTTTCTTGAAAGTATCCAC
FD566501 <-- CAATGTTTTTCTTTTTT-ATGTTTTATT-GTCTTTCTTGAAAGTATCCAC
FD981925 --> CAATGTTCTTCTTTTTT-ATGTCTTATT-GTCTTTCTTGAAAGTATCCAC
EX771969 --> CAATGTTCTTCCTTTTT-ATGTTTTATT-GTCTTTCTTGAAAGTATCCAC
EY900618 --> CAATGTTCTTCTTTTTT-ATGTTTTATT-GTCTTTCTTGAAAGTATCCAC
FD548398 --> ..................................................
FD558570 --> CAATGTTCTTCTTTTTTTATGTTTTATT-GTCTTTCTTGAAAGTATCCAC
EV566514 --> CAATGTTCTTCTTTTTT-ATGTTTTATT-GTCTTTCTTGAAAGTATCCAC
EV548518 --> CAATGTTCTTCTTTTTT-ATGTTTTATT-GTCTTTCTTGAAAGTATCCAC
FD562646 --> CAATGTTCTTCTTTTTT-ATGTTTTATT-GTCTTTCTTGAAAGTATCCAC
FD562278 --> CAATGTTCTTCTTTTTT-ATGTTTTATT-GTCTTTCTTGAAAGTATCCAC
FY443764 --> CAATGTTCTTCTTTTTT-ATGTTTTATT-GTCTTTCTTGAAAGTATCCAC
FY442437 --> CAATGTTCTTCTTTTTT-ATGTTTTATT-GTCTTTCTTGAAAGTATCCAC
EV552525 --> CAATGTTCTTCTTTTTT-ATGTTTTATT-GCCTTTCTTGAAAGTATCCAC
EW723456 --> CAATGTTCTTCTTTTTT-ATGTTTTATT-GTCTTTCTTGAAAGTATCCAC
EX773067 --> CAATGTTCTTCTTTTTTTATGTTTTATTTGTCTTTCTTGAAAGTATCCAC
601 - 651
UN22230 --> ACAACAA-AAAAAAGTTCCTAAGATGATTTGGAGCCCCCTTTTTAGTATT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776029 <-- ACAACAA-AAAAAAGTTCCTAAGATGATTTGGAGCCCCCTTTTTAGTATT Raphanus raphanistrum subsp. landra
FD977595 <-- ACAACAA-AAAAAAGTTCCTAAGATGATTTGGAGCCCCCTTTTTAGTATT Raphanus raphanistrum subsp. raphanistrum (NY)
EX776914 <-- ACAACAA-AAAAAAGTTCCTAATATGATTTGGAGCCCCCTTTTTAGTATT Raphanus raphanistrum subsp. landra
FD554440 <-- ACAACAA-AAAAAAGTTCCTAATATGATTTGGAGCCCCCTTTTTAGTATT Raphanus raphanistrum subsp. landra
FD544592 <-- ACAACAA-AAAAAAGTTCCTAATATGATTTGGAGCCCCCTTTTTAGTATT Raphanus raphanistrum subsp. raphanistrum (NY)
EV547426 <-- ACAACAA-AAAAAAGTTCCTAAGATGATTTGGAGCCCCCTTTTTAGTATT Raphanus raphanistrum subsp. raphanistrum (NY)
EY896114 <-- ACAACAACAAAAAAGTTCCTAAGATGATTTGGAGCCCCCTTTTTAGTATT Raphanus raphanistrum subsp. maritimus
FD566222 <-- ACAACAACAAAAAAGTTCCTAAGATGATTTGGAGCCCCCTTTTTAGTATT Raphanus sativus var. oleiformis
FD566501 <-- ACAACAACAAAAAAGTTCCTAAG---ATTTGGAGCCCCCTTTTTAGTATT Raphanus sativus var. oleiformis
FD981925 --> ACAACAA-AAAAAAGTTCCTAAGATGATTTGGAGCCCCCTTTTTAGTATT Raphanus raphanistrum subsp. raphanistrum (NY)
EX771969 --> ACAACAA-AAAAAAGTTCCTAAGATGATTTGGAGCCCCCTTTTTAGTATT Raphanus raphanistrum subsp. landra
EY900618 --> ACAACAACAAAAAAGTTCCTAAGATGATTTGGAGCCCCCTTTTTAGTATT Raphanus raphanistrum subsp. maritimus
FD548398 --> .................................................. Raphanus raphanistrum subsp. raphanistrum (NY)
FD558570 --> ACAACAA-AAAAAAGTTCCTAATATGATTTGGAGCCCCCTTTTTAGTATT Raphanus raphanistrum subsp. landra
EV566514 --> ACAACAA-AAAAAAGTTCCTAAGATGATTTGGAGCCCCCTTTTTA---TT Raphanus raphanistrum subsp. landra
EV548518 --> ACAACAA-AAAAAAGTTCCTAATATGATTTGGAGCCCCCTTTTTAGTATT Raphanus raphanistrum subsp. raphanistrum (NY)
FD562646 --> ACAACAACAAAAAAGTTCCTAAGAT---TTGGAGCCCCCTTTTTAGTATT Raphanus sativus var. oleiformis
FD562278 --> ACAACAACAAAAAAGTTCCTAAGATGATTTGGAGCCCCCTTTTTAGTATT Raphanus sativus var. oleiformis
FY443764 --> ACAACAACAAAAAAGTTCCTAAGATGATTTGGAGCCCCCTTTTTAGTATT Raphanus sativus cv GSK3-1
FY442437 --> ACAACAACAAAAAAGTTCCTAAGATGATTTGGAGCCCCCTTTTTAGTATT Raphanus sativus cv GSK3-1
EV552525 --> ACAACAA-AAAAAAGTTCCTAAGATGATTTGGAGCCCCCTTTTTAGTATT Raphanus raphanistrum subsp. raphanistrum (NY)
EW723456 --> ACAACAACAAAAAAGTTCCTAAGATGATTTGGAGCCCCCTTTTTAGTATT Raphanus sativus cv Early Scarlet Globe
EX773067 --> ACAACAA-AAAAAAGTTCCTAATATGATTTGGAGCCCCCTTTTTAGTATT Raphanus raphanistrum subsp. landra
651 - 701
UN22230 --> CACGATTATGACTTTCCTTCTTCTTCTTTTGGAGTCGTTTGTTATTCTAA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776029 <-- CACGATTATGACTTTCCTTCTTCTTCTTTTGAAGTCGTTTGTTATTCTAA Raphanus raphanistrum subsp. landra
FD977595 <-- CACGATTATGACTTTCCTTCTTCTTCTTTTGGAGTCGTTTGTTATTCTAA Raphanus raphanistrum subsp. raphanistrum (NY)
EX776914 <-- CACGATTATGACTTTCCTTCTTCTTCTTTTGAAGTCGTTTGTTATTCTAg Raphanus raphanistrum subsp. landra
FD554440 <-- CACGATTATGACTTTCCTTCTTCTTCTTTTGAAGTCGTTTGTTATTCTAA Raphanus raphanistrum subsp. landra
FD544592 <-- CACGATTATGACTTTCCTTCTTCTTCTTTTGGAGTCGTTTGTTATTCTAA Raphanus raphanistrum subsp. raphanistrum (NY)
EV547426 <-- CACGATTATGACTTTCCTTCTTCTTCTTTTGGAGTCGTTTGTTATTCTAA Raphanus raphanistrum subsp. raphanistrum (NY)
EY896114 <-- CACGATTATGACTTTCTTTTTTCTTCTTTTGGAGTCGTTTGTTATTCTAA Raphanus raphanistrum subsp. maritimus
FD566222 <-- CACGATTATGACTTTCCTTTTTTTTCTTTTGGAGTCGTTTGTTATTTTAA Raphanus sativus var. oleiformis
FD566501 <-- CACGATTATGACTTTCCTTTTTTTTCTTTTGGAGTCGTTTGTTATTCTAA Raphanus sativus var. oleiformis
FD981925 --> CACGATTATGACTTTCCTTCTTCTTCTTTTGGAGTCGTTTGTTATTCTAA Raphanus raphanistrum subsp. raphanistrum (NY)
EX771969 --> CACGATTATGACTTTCCTTCTTCTTCTTTTGAAGTCGTTTGTTAT..... Raphanus raphanistrum subsp. landra
EY900618 --> CACGATTATGA....................................... Raphanus raphanistrum subsp. maritimus
FD548398 --> .................................................. Raphanus raphanistrum subsp. raphanistrum (NY)
FD558570 --> CACGATTATGACTTTCCTTCTTCTTCTTTTGAAGTCGTTTGTTATTCTAA Raphanus raphanistrum subsp. landra
EV566514 --> CACGATTATGACTTTCCTTCTTCTTCTTTTGAAGTCGTTTGTTATTCTAA Raphanus raphanistrum subsp. landra
EV548518 --> CACGATTATGACTTTCCTTCTTCTTCTTTTGGAGTCGTTTGTTATTCT.. Raphanus raphanistrum subsp. raphanistrum (NY)
FD562646 --> CACGATTATGACTTTCCTTCTTC........................... Raphanus sativus var. oleiformis
FD562278 --> CACGATTATGACTTTCCTTCTTCTTCTTTTGGAGTCGTTTGTTATTCTAA Raphanus sativus var. oleiformis
FY443764 --> CACGATTATGACTTTCCTTCTTCTTCTTTTGGAGTCGTTTGTTATTCTAA Raphanus sativus cv GSK3-1
FY442437 --> CACGATTATGACTTTCCTTCTTCTTCTTTTGGAGTCGTTTGTTATTCTAA Raphanus sativus cv GSK3-1
EV552525 --> CACGATTATGACTTTCCTTCTTCTTCTTTTGGAGTCGTTTGTTATTCTAA Raphanus raphanistrum subsp. raphanistrum (NY)
EW723456 --> CACGATTATGACTTTCCTTCTTCTTCTTTTGGAGTCGTTTGTTATTCTAA Raphanus sativus cv Early Scarlet Globe
EX773067 --> CACGATTATGACTTTCCTTCTTCTTCTTTTGAAGTCGTTTGTTATTCTAg Raphanus raphanistrum subsp. landra
701 - 751
UN22230 --> AAATGCTGTAAAATCGTGTTGCCACTTTTATTGGAAAACCAGGAAAAAAA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776029 <-- AAATGCTGTAAAATCGTGTTGCCACTTTTATTGGAAAACCAGG.......
FD977595 <-- AAATGCTGTAAAATCGTGTTGCCACTTTTATTGGAAAACCAGG.......
EX776914 <-- ..................................................
FD554440 <-- AAATGCTGTAAAATCGTGTTGCCACTTTTATTGGAAAACCAGG.......
FD544592 <-- AAATGCTGTAAAATCGTGTTGCCACTTTTATTGGAAAACCAGG.......
EV547426 <-- AAATGCTGTAAAATCGTGTTGCCACTTTTATTGGAAAACCAGG.......
EY896114 <-- AAATGCTGTAAAATCGTGTTGCCACTTTTATTGGAAAACCAGG.......
FD566222 <-- AAATGCTGTAAAATCGTGTTACCACTTTTATTGGAAAACCAGG.......
FD566501 <-- AAATGCTGTAAAATCGTGTTGCCACTTTTATTGGAAAACCAGG.......
FD981925 --> AA-TGCTGTAAAATCGTGTTGCCACTTTTATTGGAAA-CCAGG.......
EX771969 --> ..................................................
EY900618 --> ..................................................
FD548398 --> ..................................................
FD558570 --> AAATGCTGTAAAATCGTGTTGCCACTTTTATTGGAAAACCAGG.......
EV566514 --> AAATGCTGTAAAATCGTGTTGCCACTTTTATTGGAAAACCAGG.......
EV548518 --> ..................................................
FD562646 --> ..................................................
FD562278 --> AAATGCTGTAAAATCGTGTTACCACTTTTATTGGAAAACCAGG.......
FY443764 --> AAATGCTGTAAAATCGTGTTGCCACTTTTATTGGAAAACCAGG.......
FY442437 --> AAATGCTGTAAAATCGTGTTGCCACTTTTATTGGAAAACCAGG.......
EV552525 --> AAATGCTGTAAAATCGTGTTGCCACTTTTATTGGAAAACCAGG.......
EW723456 --> AAATGCTGTAAAATCGTGTTGCCACTTTTATTGGAAAACCAGGAAAAAAA
EX773067 --> ..................................................
751 - 801
UN22230 --> AAGGAAAGG
~~~~~~~~~
EX776029 <-- .........
FD977595 <-- .........
EX776914 <-- .........
FD554440 <-- .........
FD544592 <-- .........
EV547426 <-- .........
EY896114 <-- .........
FD566222 <-- .........
FD566501 <-- .........
FD981925 --> .........
EX771969 --> .........
EY900618 --> .........
FD548398 --> .........
FD558570 --> .........
EV566514 --> .........
EV548518 --> .........
FD562646 --> .........
FD562278 --> .........
FY443764 --> .........
FY442437 --> .........
EV552525 --> .........
EW723456 --> AAGGAAAGG
EX773067 --> .........
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