1      -     51
UN22243        --> GGGACTCCTTGTCCCCATATAATAGCTCTCTCTCTCTCTCTCTCTTCGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX908903       <-- ..................................................
EW721438       <-- ..................................................
EV574347       <-- ..................................................
FY441397       <-- ..................................................
FY442365       <-- ..................................................
FD967848       <-- ..................................................
EV529493       <-- ..................................................
FY442562       <-- ..................................................
EV574200       <-- ..................................................
EV540085       <-- ..................................................
FD539520       <-- ..................................................
FD583110       <-- ..................................................
EV540172       <-- ..................................................
EY903421       <-- ..................................................
EX774247       <-- ..................................................
EX886281       --> GGGACTCCTTGTCCCCATATAATAGCTCTCTCTCTCTCTCTCTCTTCGTT
EY907503       --> .GGACTCCTTGTCCCCTTATAATAGCTCTCTCTCTCTCTCT----TCGTT
FD955963       --> .GGACTCCTTGTCCCCATATAATAGATCTCTCTCTCTCTCT----TCGTT
FD971826       --> .GGACTCCTTGTCCCCTTATAATAGCTCTCTCTCTCTCT------TCGTT
FD562419       --> ..............ggATATAATAGCTCTCTCTCTCTCTCTCTCTTCGTT
EV524512       --> ...................catataatagCTCTCTCTCTCTCTCTTCGTT
EV535389       --> ..................ggatataatagCTCTCTCTCTCTCTCTTCGTT
FD533459       --> ............ccttgtccccttataatagCTCTCTCTCTCTCTTCGTT
EW717444       --> ............................................gggGTT
EV527566       --> ..................................................
EV569727       --> ..................................................
EV569920       --> ..................................................
EX905129       --> ..................................................
FD571626       --> ..................................................
FD579057       --> ..................................................
EV550362       --> ..................................................
FD979150       --> ..................................................
EV535509       --> ..................................................

               51     -    101
UN22243        --> -CTTCCAACTCCTACCGGCGCAGCTGAGAAGTTTATCTCGCGGAAGAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX908903       <-- .............ACCGGCGCAGCTGAGA-G-TTATCTCGCGGAAGAGGC
EW721438       <-- ...................................TCTCGCG-AAGAG-C
EV574347       <-- ....................................CTCGCGGAAGAGGC
FY441397       <-- ......................................CGCGGAAGAGGC
FY442365       <-- ..................................................
FD967848       <-- ..................................................
EV529493       <-- ..................................................
FY442562       <-- ..................................................
EV574200       <-- ..................................................
EV540085       <-- ..................................................
FD539520       <-- ..................................................
FD583110       <-- ..................................................
EV540172       <-- ..................................................
EY903421       <-- ..................................................
EX774247       <-- ..................................................
EX886281       --> -CTTCCAACTCCTACCGGCGCAGCTGAGAAGTTTATCTCGCGGAAGAGGC
EY907503       --> -CTTCCAACTCCTACCGGCGCAGCTGAGAAGTTTATCTCGCGGAAGAGGC
FD955963       --> -CTTCCAACTCCTACCGGCGCAGCTGAGAAGTTTATCTCGCGGAAGAGGC
FD971826       --> -CTTCCAACTCCTACCGGCGCAGCTGAGAAGTTTATCTCGCGGAAGAGGC
FD562419       --> -CTTCCAACTCCTACCGGCGCAGCTGAGAAGTTTATCTCGCGGAAGAGGC
EV524512       --> -CTTCCAACTCCTACCGTCGCAGCTGAGAAGTTTATCTCGCGGAAGAGGC
EV535389       --> -CTTCCAACTCCTACCGGCGCAGCTGAGAAGTTTATCTCGCGGAAGAGGC
FD533459       --> CCTTCCAACTCCTACCGGCGCAGCTGAGAAGTTTATCTCGCGGAAGAGGC
EW717444       --> -CTTCCAACTCCTACCGGCGCAGCTGAGAAGTTTATCTCGCGGAAGAGGC
EV527566       --> ....ggAACTCCTACCGGCGCAGCTGAGAAGTTTATCTCGCGGAAGAGGC
EV569727       --> ....ggAACTCCTACCGGCGCAGCTGAGAAGTTTATCTCGCGGAAGAGGC
EV569920       --> ....ggAACTCCTACCGGCGCAGCTGAGAAGTTTATCTCGCGGAAGAGGC
EX905129       --> ....ggAACTCCTACCGGCGCAGCTGAGAAGTTTATCTCGCGGAAGAGGC
FD571626       --> ....ggAACTCCTACCGGCGCAGCTGAGAAGTCTATCTCGCGGAAGAGGC
FD579057       --> ....ggAACTCCTACAGGCGCAGCTGAGAAGTTTATCTCGCGGAAGAGGC
EV550362       --> ...............................TTTATCTCGCGGAAGAGGC
FD979150       --> .................................TATCTCGCGGAAGAGGC
EV535509       --> ..................................................

               101    -    151
UN22243        --> AACCATGGGTATCTCTCGTGACTCCATCCACAAGAGGCGTGCCACTGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX908903       <-- AACCATGG-TATCTCTCGTGACTCCATCCACAAGAGGCGTGCCACTGGAG
EW721438       <-- AACCATGGGTATCTCTCGTGACTCCATCCACAAGAGGCGTGCCACTG-A-
EV574347       <-- AACCATGGGTATCTCTCGTGACTCCATCCACAAGAGGCGTGCCACTGGAG
FY441397       <-- AACCATGGGTATCTCTCGTGACTCCATCCACAAGAGGCGTGCCACTGGAG
FY442365       <-- .........TATCTCTCGTGACTCCATCCACAAGAGGCGTGCCACTGGAG
FD967848       <-- ...........TCTCTCGTGACTCCATCCACAAGAGGCGTGCCACTGGAG
EV529493       <-- .......................................TGCCACTGGAG
FY442562       <-- .......................................TGCCACTGGAG
EV574200       <-- ..........................................CACTGGAG
EV540085       <-- ..................................................
FD539520       <-- ..................................................
FD583110       <-- ..................................................
EV540172       <-- ..................................................
EY903421       <-- ..................................................
EX774247       <-- ..................................................
EX886281       --> AACCATGGGTATCTCTCGTGACTCCATCCACAAGAGGCGTGCCACTGGAG
EY907503       --> AACCATGGGTATCTCTCGTGACTCCATCCACAAGAGGCGTGCCACTGGAG
FD955963       --> AACCATGGGTATCTCTCGTGACTCCATCCACAAGAGGCGTGCCACTGGAG
FD971826       --> AACCATGGGTATCTCTCGTGACTCCATCCACAAGAGGCGTGCCACTGGAG
FD562419       --> AACCATGGGTATCTCTCGTGACTCCATCCACAAGAGGCGTGCCACTGGAG
EV524512       --> AACCATGGGTATCTCTCGTGACTCCATCCACAAGAGGCGTGCCACTGGAG
EV535389       --> AACCATGGGTATCTCTCGTGACTCCATCCACAAGAGACGTGCCACTGGAG
FD533459       --> AACCATGGGTATCTCTCGTGACTCCATCCACAAGAGGCGTGCCACTGGAG
EW717444       --> AACCATGGGTATCTCTCGTGACTCCATCCACAAGAGGCGTGCCACTGGAG
EV527566       --> AACCATGGGTATCTCTCGTGACTCCATCCACAAGAGGCGTGCCACTGGAG
EV569727       --> AACCATGGGTATCTCTCGTGACTCCATCCACAAGAGGCGTGCCACTGGAG
EV569920       --> AACCATGGGTATCTCTCGTGACTCCATCCACAAGAGGCGTGCCACTGGAG
EX905129       --> AACCATGGGTATCTCTCGTGACTCCATCCACAAGAGGCGTGCCACTGGAG
FD571626       --> AACCATGGGTATCTCTCGTGACTCCATCCACAAGAGGCGTGCCACTGGAG
FD579057       --> AACCATGGGTATCTCTCGTGACTCCATCCACAAGAGGCGTGCCACTGGAG
EV550362       --> AACCATGGGTATCTCTCGTGACTCCATCCACAAGAGGCGTGCCACTGGAG
FD979150       --> AACCATGGGTATCTCTCGTGACTCCATCCACAAGAGGCGTGCCACTGGAG
EV535509       --> ..................................................

               151    -    201
UN22243        --> GCAAGCAGAAGGGATGGAGGAAGAAGCGAAAGTACGAGATGGGAAGGCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX908903       <-- GCAAGCAGAAGGGATGGAGGAAGAAGCGAAAGTACGAGATGGGAAGGCAG
EW721438       <-- GCAAGCAGAAGGGATGGAGGAAGAAGCGAAAGTACGAGATGGGAAGGCAG
EV574347       <-- GCAAGCAGAAGGGATGGAGGAAGAAGCGAAAGTACGAGATGGGAAGGCAG
FY441397       <-- GCAAACAGAAGGGATGGAGGAAGAAGCGAAAGTACGAGATGGGAAGGCAG
FY442365       <-- GCAAACAGAAGGGATGGAGGAAGAAGCGAAAGTACGAGATGGGAAGGCAG
FD967848       <-- GCAAGCAGAAGGGATGGAGGAAGAAGCGAAAGTACGAGATGGGAAGGCAG
EV529493       <-- GCAAGCAGAAGGGATGGAGGAAGAAGCGAAAGTACGAGATGGGAAGGCAG
FY442562       <-- GCAAACAGAAGGGATGGAGGAAGAAGCGAAAGTACGAGATGGGAAGGCAG
EV574200       <-- GCAAGCAGAAGGGATGGAGGAAGAAGCGAAAGTACGAGATGGGAAGGCAG
EV540085       <-- ..................GGAAGAAGCGAAAGTACGAGATGGGAAGGCAG
FD539520       <-- ...............................GTACGAGATGGGAAGGCAG
FD583110       <-- ..................................................
EV540172       <-- ..................................................
EY903421       <-- ..................................................
EX774247       <-- ..................................................
EX886281       --> GCAAGCAGAAGGGATGGAGGAAGAAGCGAAAGTACGAGATGGGAAGGCAG
EY907503       --> GCAAGCAGAAGGGATGGAGGAAGAAGCGAAAGTACGAGATGGGAAGGCAG
FD955963       --> GCAAGCAGAAGGGATGGAGGAAGAAGCGAAAGTACGAGATGGGAAGGCAG
FD971826       --> GCAAGCAGAAGGGATGGAGGAAGAAGCGAAAGTACGAGATGGGAAGGCAG
FD562419       --> GCAAGCAGAAGGGATGGAGGAAGAAGCGTAAGTACGAGATGGGAAGGCAG
EV524512       --> GCAAGCAGAAGGGATGGAGGAAGAAGCGAAAGTACGAGATGGGAAGGCAG
EV535389       --> GCAAGCAGAAGGGATGGAGGAAGAAGCGAAAGTACGAGATGGGAAGGCAG
FD533459       --> GTAAGCAGAAGGGATGGAGGAAGAAGCGAAAGTACGAGATGGGAAGGCAG
EW717444       --> GCAAGCAGAAGGGATGGAGGAAGAAGCGAAAGTACGAGATGGGAAGGCAG
EV527566       --> GCAAGCAGAAGGGATGGAGGAAGAAGCGAAAGTACGAGATGGGAAGGCAG
EV569727       --> GCAAGCAGAAGGGATGGAGGAAGAAGCGAAAGTACGAGATGGGAAGGCAG
EV569920       --> GCAAGCAGAAGGGATGGAGGAAGAAGCGAAAGTACGAGATGGGAAGGCAG
EX905129       --> GCAAGCAGAAGGGATGGAGGAAGAAGCGAAAGTACGAGATGGGAAGGCAG
FD571626       --> GCAAGCAGAAGGGATGGAGGAAGAAGCGAAAGTACGAGATGGGAAGGCAG
FD579057       --> GCAAGCAGAAGGGATGGAGGAAGAAGCGAAAGTACGAGATGGGAAGGCAG
EV550362       --> GCAAGCAGAAGGGATGGAGGAAGAAGCGAAAGTACGAGATGGGAAGGCAG
FD979150       --> GCAAGCAGAAGGGATGGAGGAAGAAGCGAAAGTACGAGATGGGAAGGCAG
EV535509       --> ..................................................

               201    -    251
UN22243        --> CCAGCCAACACCAAGTTGTCAAGCAACAAGACGGTGAGAAGAATCCGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX908903       <-- CCAGCTAACACCAAGTTGTCAAGCAACAAGACGGTGAGGAGAATCCGAGT  Raphanus sativus cv Rat-Tail Radish #3870
EW721438       <-- CCAGCCAACACCAAGTTGTCAAGCAACAAGACGGTGAGAAGAATCCGAGT  Raphanus sativus var. oleiformis
EV574347       <-- CCAGCTAACACCAAGTTGTCAAGCAACAAGACGGTGAGGAGAATCCGAGT  Raphanus raphanistrum subsp. landra
FY441397       <-- CCAGCCAACACCAAGTTGTCAAGCAACAAGACGGTGAGAAGAATCCGAGT  Raphanus sativus cv GSK3-1
FY442365       <-- CCAGCCAACACCAAGTTGTCAAGCAACAAGACGGTGAGAAGAATCCGAGT  Raphanus sativus cv GSK3-1
FD967848       <-- CCAGCCAACACCAAGTTGTCAAGCAACAAGACGGTGAGAAGAATCAGAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV529493       <-- CCAGCTAACACCAAGTTGTCAAGCAACAAGACGGTGAGGAGAATCCGAGT  Raphanus raphanistrum subsp. maritimus
FY442562       <-- CCAGCCAACACCAAGTTGTCAAGCAACAAGACGGTGAGAAGAATCCGAGT  Raphanus sativus cv GSK3-1
EV574200       <-- CCAGCTAACACCAAGTTGTCAAGCAACAAGACGGTGAGGAGAATCCGAGT  Raphanus raphanistrum subsp. landra
EV540085       <-- CCAGCTAACACCAAGTTGTCAAGCAACAAGACGGTGAGGAGAATCCGTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539520       <-- CCAGCCAACACCAAGTTGTCAAGCAACAAGACGGTGAGAAGAATCCGAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD583110       <-- ...........................AAGACGGTGAGGAGAATCCGAGT  Raphanus sativus cv Rat-Tail Radish #3870
EV540172       <-- ............................................gaGAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903421       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX774247       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX886281       --> CCAGCCAACACCAAGTTGTCAAGCAACAAGACGGTGAGAAGAATCCGAGT  Raphanus sativus var. oleiformis
EY907503       --> C-AGCCAACACCAAGTTGTCAAGCAACAAGACGGTGAGAAGAATCAGAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955963       --> CCAGCCAACACGAAGTTGTCAAGCAACAAGACGGTGAGAAGAATCCGAGT  Raphanus sativus cv Rat-Tail Radish #3870
FD971826       --> CCAGCCAACACCAAGTTGTCAAGCAACAAGACGGTGAGAAGAATCAGAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD562419       --> CCAGCCAACACCAAGTTGTCAAGCAACAAGACGGTGAGAAGAATCCGAGT  Raphanus sativus var. oleiformis
EV524512       --> CCAGCTAACACCAAGTTGTCAAGCAACAAGACGGTGAGGAGAATCCGAGT  Raphanus raphanistrum subsp. maritimus
EV535389       --> CCAGCTAACACCAAGTTGTCAAGCAACAAGACGGTGAGGAGAATCCGTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD533459       --> CCAGCCAACACCAAGTTGTCAAGCAACAAGACGGTGAGAAGAATCCGAGT  Raphanus raphanistrum subsp. maritimus
EW717444       --> CCAGCCAACACCAAGTTGTCAAGCAACAAGACGGTGAGAAGAATCCGAGT  Raphanus sativus var. oleiformis
EV527566       --> CCAGCCAACACCAAGTTGTCAAGCAACAAGACGGTGAGAAGAATCCGAGT  Raphanus raphanistrum subsp. maritimus
EV569727       --> CCAGCTAACACCAAGTTGTCAAGCAACAAGACGGTGAGGAGAATCCGAGT  Raphanus raphanistrum subsp. landra
EV569920       --> CCAGCTAACACCAAGTTGTCAAGCAACAAGACGGTGAGGAGAATCCGAGT  Raphanus raphanistrum subsp. landra
EX905129       --> CCAGCTAACACCAAGTTGTCAAGCAACAAGACGGTGAGGAGAATCCGAGT  Raphanus sativus cv Rat-Tail Radish #3870
FD571626       --> CCAGCCAACACCAAGTTGTCAAGCAACAAGACGGTGAGAAGAATCCGAGT  Raphanus sativus cv Early Scarlet Globe
FD579057       --> CCAGCCAACACCAAGTTGTCAAGCAACAAGACGGTGAGGAGAATCCGAGT  Raphanus sativus cv Rat-Tail Radish #3870
EV550362       --> CCAGCCAACACCAAGTTGTCAAGCAACAAGACGGTGAGAAGAATCCGAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979150       --> CCAGCCAACACCAAGTTGTCAAGCAACAAGACGGTGAGAAGAATCCGAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV535509       --> ............................................gaGAGT  Raphanus raphanistrum subsp. raphanistrum (MS)

               251    -    301
UN22243        --> CCGTGGAGGTAACGTCAAGTGGCGCGCGTTGAGGCTCGACACCGGTAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX908903       <-- CCGTGGAGGTAACGTCAAGTGGCGTGCGCTGAGGCTCGACACCGGTAACT  Raphanus sativus cv Rat-Tail Radish #3870
EW721438       <-- CCGTGGAGGTAACGTCAAGTGGCGCGCGTTGAGGCTCGACACCGGTAACT  Raphanus sativus var. oleiformis
EV574347       <-- CCGTGGAGGTAACGTCAAGTGGCGTGCGTTGAGGCTCGACACCGGTAACT  Raphanus raphanistrum subsp. landra
FY441397       <-- CCGTGGAGGTAACGTCAAGTGGCGCGCGTTGAGGCTCGACACCGGTAACT  Raphanus sativus cv GSK3-1
FY442365       <-- CCGTGGAGGTAACGTCAAGTGGCGCGCGTTGAGGCTCGACACCGGTAACT  Raphanus sativus cv GSK3-1
FD967848       <-- CCGTGGAGGTAACGTCAAGTGGCGCGCGTTGAGGCTCGACACCGGTAACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV529493       <-- CCGTGGAGGTAACGTCAAGTGGCGTGCGTTGAGGCTCGACACCGGTAACT  Raphanus raphanistrum subsp. maritimus
FY442562       <-- CCGTGGAGGTAACGTCAAGTGGCGCGCGTTGAGGCTCGACACCGGTAACT  Raphanus sativus cv GSK3-1
EV574200       <-- CCGTGGAGGTAACGTCAAGTGGCGTGCGTTGAGGCTCGACACCGGTAACT  Raphanus raphanistrum subsp. landra
EV540085       <-- TCGTGGAGGTAACGTCAAGTGGCGCGCGTTGAGGCTCGACACCGGTAACT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539520       <-- CCGTGGAGGTAACGTCAAGTGGCGTGCGTTGAGGCTCGACACCGGTAACT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD583110       <-- CCGTGGAGGTAACGTCAAGTGGCGCGCGTTGAGGCTCGACACCGGTAACT  Raphanus sativus cv Rat-Tail Radish #3870
EV540172       <-- CCGTGGAGGTAACGTCAAGTGGCGCGCGTTGAGGCTCGACACCGGTAACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903421       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX774247       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX886281       --> CCGTGGAGGTAACGTCAAGTGGCACGCGTTGAGGCTCGACACCGGTAACT  Raphanus sativus var. oleiformis
EY907503       --> CCGTGGAGGTAACGTCAAGTGGCGCGCGTTGAGGCTCGAC--CGGTAACT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955963       --> CCGTGGAGGTAACGTCAAGTGGCGCGCGTTGAGGCTCGACACCGGTAACT  Raphanus sativus cv Rat-Tail Radish #3870
FD971826       --> CCGTGGAGGTAACGTCAAGTGGCGCGCGTTGAGGCTCGACACCGGTAACT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD562419       --> CCGTGGAGGTAACGTCAAGTGGCGCGCGTTGAGGCTCGACACCGGTAACT  Raphanus sativus var. oleiformis
EV524512       --> CCGTGGAGGTAACGTCAAGTGGCGTGCGTTGAGGCTCGACACCGGTAACT  Raphanus raphanistrum subsp. maritimus
EV535389       --> TCGTGGAGGTAACGTCAAGTGGCGCGCGTTGAGGCTCGACACCGGTAACT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD533459       --> CCGTGGAGGTAACGTCAAGTGGCGTGCGTTGAGGCTCGACACCGGTAACT  Raphanus raphanistrum subsp. maritimus
EW717444       --> CCGTGGAGGTAACGTCAAGTGGCGCGCGTTGAGGCTCGACACCGGTAACT  Raphanus sativus var. oleiformis
EV527566       --> CCGTGGAGGTAACGTCAAGTGGCGTGCGTTGAGGCTCGACACCGGTAACT  Raphanus raphanistrum subsp. maritimus
EV569727       --> CCGTGGAGGTAACGTCAAGTGGCGTGCGTTGAGGCTCGACACCGGTAACT  Raphanus raphanistrum subsp. landra
EV569920       --> CCGTGGAGGTAACGTCAAGTGGCGTGCGTTGAGGCTCGACACCGGTAACT  Raphanus raphanistrum subsp. landra
EX905129       --> CCGTGGAGGTAACGTCAAGTGGCGTGCGCTGAGGCTCGACACCGGTAACT  Raphanus sativus cv Rat-Tail Radish #3870
FD571626       --> CCGTGGAGGTAACGTCAAGTGGCGCGCGTTGAGGCTCGACACCGGTAACT  Raphanus sativus cv Early Scarlet Globe
FD579057       --> CCGTGGAGGTAACGTCAAGTGGCGCGCGTTGAGGCTCGACACCGGTAACT  Raphanus sativus cv Rat-Tail Radish #3870
EV550362       --> CCGTG-AGGTAACGTCAAGTGGCGCGCGTTGAGGCTCGACACTGGTAACT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979150       --> CCGTGGAGGTAACGTCAAGTGGCGCGCGTTGAGGCTCGACACCGGTAACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV535509       --> CCGTGGAGGTAACGTCAAGTGGCGCGCGTTGAGGCTCGACACCGGTAACT  Raphanus raphanistrum subsp. raphanistrum (MS)

               301    -    351
UN22243        --> ACTCGTGGGGAAGTGAAGCGGTGACACGCAAGACCAGGGTTCTTGATGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX908903       <-- ACTCGTGGGGAAGTGAAGCTGTTACCCGCAAGACCAGGGTTCTTGATGTC  Raphanus sativus cv Rat-Tail Radish #3870
EW721438       <-- ACTCGTGGGGAAGTGAAGCTGTTACCCGCAAGACCAGGGTTCTTGATGTC  Raphanus sativus var. oleiformis
EV574347       <-- ACTCGTGGGGAAGTGAAGCGGTGACACGCAAGACCAGGGTTCTCGATGTC  Raphanus raphanistrum subsp. landra
FY441397       <-- ACTCGTGGGGAAGTGAAGCGGTGACACGCAAGACCAGGGTTCTTGATGTC  Raphanus sativus cv GSK3-1
FY442365       <-- ACTCGTGGGGAAGTGAAGCGGTGACACGCAAGACCAGGGTTCTTGATGTC  Raphanus sativus cv GSK3-1
FD967848       <-- ACTCGTGGGGAAGTGAAGCGGTGACACGCAAGACCAGGGTTCTTGATGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV529493       <-- ACTCGTGGGGAAGTGAAGCGGTGACACGCAAGACCAGGGTTCTCGATGTC  Raphanus raphanistrum subsp. maritimus
FY442562       <-- ACTCGTGGGGAAGTGAAGCGGTGACACGCAAGACCAGGGTTCTTGATGTC  Raphanus sativus cv GSK3-1
EV574200       <-- ACTCGTGGGGAAGTGAAGCGGTGACACGCAAGACCAGGGTTCTCGATGTC  Raphanus raphanistrum subsp. landra
EV540085       <-- ACTCGTGGGGAAGTGGAGCTGTGACACGCAAGACCAGGGTTCTTGATGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539520       <-- ACTCGTGGGGAAGTGAAGCTGTTACCCGCAAGACCAGGGTTCTCGATGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD583110       <-- ACTCGTGGGGAAGTGAAGCTGTTACCCGCAAGACCAGGGTTCTTGATGTC  Raphanus sativus cv Rat-Tail Radish #3870
EV540172       <-- ACTCGTGGGGAAGTGAAGCGGTGACACGCAAGACCAGGGTCCTTGATGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903421       <-- ...............AAGCGGTGACACGCAAGACCAGGGTTCTTGATGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX774247       <-- .............................................ATGTC  Raphanus raphanistrum subsp. landra
EX886281       --> ACTCGTGGGGAAGTGAAGCTGTTACCCGCAAGACCAGGGTTCTTGATGTC  Raphanus sativus var. oleiformis
EY907503       --> ACTCGTGGGGAAGTGAAGCGGTGACACGCAAGACCAGGGTTCTTGATGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955963       --> ACTCGTGGGGAAGTGAAGCTGTTACCCGCAAGACCAGGGTTCTTGATGTC  Raphanus sativus cv Rat-Tail Radish #3870
FD971826       --> ACTCGTGGGGAAGTGAAGCGGTGACACGCAAGACCAGGGTTCTTGATGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD562419       --> ACTCGTGGGGAAGTGAAGCTGTTACCCGCAAGACCAGGGTTCTTGATGTC  Raphanus sativus var. oleiformis
EV524512       --> ACTCGTGGGGAAGTGAAGCGGTGACACGCAAGACCAGGGTTCTCGATGTC  Raphanus raphanistrum subsp. maritimus
EV535389       --> ACTCGTGGGGAAGTGGAGCTGTGACACGCAAGACCAGGGTTCTTGATGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD533459       --> ACTCGTGGGGAAGTGAAGCGGTGACACGCAAGACCAGGGTTCTCGATGTC  Raphanus raphanistrum subsp. maritimus
EW717444       --> ACTCGTGGGGAAGTGAAGCTGTTACCCGCAAGACCAGGGTTCTTGATGTC  Raphanus sativus var. oleiformis
EV527566       --> ACTCGTGGGGAAGTGAAGCGGTGACACGCAAGACCAGGGTTCTCGATGTC  Raphanus raphanistrum subsp. maritimus
EV569727       --> ACTCGTGGGGAAGTGAAGCGGTGACACGCAAGACCAGGGTTCTCGATGTC  Raphanus raphanistrum subsp. landra
EV569920       --> ACTCGTGGGGAAGTGAAGCGGTGACACGCAAGACCAGGGTTCTCGATGTC  Raphanus raphanistrum subsp. landra
EX905129       --> ACTCGTGGGGAAGTGAAGCTGTTACCCGCAAGACCAGGGTTCTTGATGTC  Raphanus sativus cv Rat-Tail Radish #3870
FD571626       --> ACTCGTGGGGAAGTGAAGCTGTTACCCGCAAGACCAGGGTTCTTGATGTC  Raphanus sativus cv Early Scarlet Globe
FD579057       --> ACTCGTGGGGAAGTGAAGCTGTTACCCGCAAGACCAGGGTTCTTGATGTC  Raphanus sativus cv Rat-Tail Radish #3870
EV550362       --> ACTCGTGGGGAAGTGAAGCTGTTACCCGCAAGACCAGGGTTCTTGATGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979150       --> ACTCGTGGGGAAGTGAAGCTGTTACCCGCAAGACCAGGGTTCTTGATGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV535509       --> ACTCGTGGGGAAGTGAAGCGGTGACACGCAAGACCAGGGTCCTTGATGTT  Raphanus raphanistrum subsp. raphanistrum (MS)

               351    -    401
UN22243        --> GTCTACAACGCTTCCAACAATGAGCTCGTCAGGACCAAGACTCTTGTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX908903       <-- GTCTACAACGCTTCCAACAATGAGCTCGTCAGGACCAAGACTCTTGTTAA  Raphanus sativus cv Rat-Tail Radish #3870
EW721438       <-- GTCTACAACGCTTCCAACAATGAGCTCGTCAGGACCAAGACTCTTGTTAA  Raphanus sativus var. oleiformis
EV574347       <-- GTTTACAACGCTTCCAACAACGAGCTCGTCAGGACCAAGACTCTTGTGAA  Raphanus raphanistrum subsp. landra
FY441397       <-- GTCTACAACGCTTCCAACAATGAGCTCGTCAGGACCAAGACTCTTGTTAA  Raphanus sativus cv GSK3-1
FY442365       <-- GTCTACAACGCTTCCAACAATGAGCTCGTCAGGACCAAGACTCTTGTTAA  Raphanus sativus cv GSK3-1
FD967848       <-- GTCTACAACGCTTCCAACAATGAGCTCGTCAGGACCAAGACTCTTGTAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV529493       <-- GTCTACAACGCTTCCAACAACGAGCTCGTCAGGACCAAGACTCTTGTGAA  Raphanus raphanistrum subsp. maritimus
FY442562       <-- GTCTACAACGCTTCCAACAATGAGCTCGTCAGGACCAAGACTCTTGTTAA  Raphanus sativus cv GSK3-1
EV574200       <-- GTCTACAACGCTTCCAACAACGAGCTCGTCAGGACCAAGACTCTTGTGAA  Raphanus raphanistrum subsp. landra
EV540085       <-- GTCTACAACGCTTCCAACAACGAGCTCGTCAGGACCAAGACTCTTGTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539520       <-- GTCTACAACGCTTCCAACAACGAGCTTGTCAGGACCAAGACCCTTGTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD583110       <-- GTCTACAACGCTTCCAACAATGAGCTCGTCAGGACCAAGACTCTTGTTAA  Raphanus sativus cv Rat-Tail Radish #3870
EV540172       <-- GTCTACAACGCTTCCAACAATGAGCTCGTCAGGACCAAGACTCTTGTAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903421       <-- GTCTACAACGCTTCCAACAATGAGCTCGTCAGGACCAAGACTCTTGTAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX774247       <-- GTCTACAACGCTTCCAACAACGAGCTCGTCAGGACCAAGACTCTTGTGAA  Raphanus raphanistrum subsp. landra
EX886281       --> GTCTACAACGCTTCCAACAATGAGCTCGTCAGGACCAAGACTCTTGTTAA  Raphanus sativus var. oleiformis
EY907503       --> GTCTACAACGCTTCCAACAATGAGCTCGTCAGGACCAAGACTCTTGTAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955963       --> GTCTACAACGCTTCCAACAATGAGCTCGTCAGGACCAAGACTCTTGTTAA  Raphanus sativus cv Rat-Tail Radish #3870
FD971826       --> GTCTACAACGCTTCCAACAATGAGCTCGTCAGGACCAAGACTCTTGTAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD562419       --> GTCTACAACGCTTCCAACAATGAGCTCGTCAGGACCAAGACTCTTGTTAA  Raphanus sativus var. oleiformis
EV524512       --> GTCTACAACGCTTCCAACAACGAGCTCGTCAGGACCAAGACTCTTGTGAA  Raphanus raphanistrum subsp. maritimus
EV535389       --> GTCTACAACGCTTCCAACAACGAGCTCGTCAGGACCAAGACTCTTGTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD533459       --> GTCTACAACGCTTCCAACAACGAGCTCGTCAGGACCAAGACTCTTGTGAA  Raphanus raphanistrum subsp. maritimus
EW717444       --> GTCTACAACGCTTCCAACAATGAGCTCGTCAGGACCAAGACTCTTGTTAA  Raphanus sativus var. oleiformis
EV527566       --> GTCTACAACGCTTCCAACGACGAGCTCGTCAGGACCAAGACTCTTGTGAA  Raphanus raphanistrum subsp. maritimus
EV569727       --> GTCTACAACGCTTCCAACAACGAGCTCGTCAGGACCAAGACTCTTGTGAA  Raphanus raphanistrum subsp. landra
EV569920       --> GTCTACAACGCTTCCAACAACGAGCTCGTCAGGACCAAGACTCTTGTGAA  Raphanus raphanistrum subsp. landra
EX905129       --> GTCTACAACGCTTCCAACAATGAGCTCGTCAGGACCAAGACTCTTGTTAA  Raphanus sativus cv Rat-Tail Radish #3870
FD571626       --> GTCTACAACGCTTCCAACAATGAGCTCGTCAGGACCAAGACTCTTGTTAA  Raphanus sativus cv Early Scarlet Globe
FD579057       --> GTCTACAACGCTTCCAACAATGAGCTCGTCAGGACCAAGACTCTTGTTAA  Raphanus sativus cv Rat-Tail Radish #3870
EV550362       --> GTCTACAACGCTTCCAACAATGAGCTCGTCAGGACCAAGACTCTTGTTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979150       --> GTCTACAACGCTTCCAACAATGAGCTCGTCAGGACCAAGACTCTTGTTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV535509       --> GTCTACAACGCTTCCAACAATGAGCTCGTCAGGACCAAGACTCTTGTAAA  Raphanus raphanistrum subsp. raphanistrum (MS)

               401    -    451
UN22243        --> GAGTGCTATTGTTCAGGTCGATGCCGCTCCTTTCAAGCAGTGGTACTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX908903       <-- GAGTGCTATTGTTCAGGTCGATGCCGCTCCTTTCAAGCAGTGGTACTTGC
EW721438       <-- GAGTGCTATTGTTCAGGTCGATGCCGCTCCTTTCAAGCAGTGGTACTTGC
EV574347       <-- GAGTGCTATTGTTCAGGTCGATGCCGCTCCTTTCAAGCAGTGGTACTTGC
FY441397       <-- GAGTGCTATTGTTCAGGTCGATGCCGCTCCTTTCAAGCAGTGGTACTTGC
FY442365       <-- GAGTGCTATTGTTCAGGTCGATGCCGCTCCTTTCAAGCAGTGGTACTTGC
FD967848       <-- GAGTGCTATTGTTCAGGTCGATGCTGCTCCTTTCAAGCAGTGGTACTTGC
EV529493       <-- GAGTGCTATTGTTCAGGTCGATGCCGCTCCTTTCAAGCAGTGGTACTTGC
FY442562       <-- GAGTGCTATTGTTCAGGTCGATGCCGCTCCTTTCAAGCAGTGGTACTTGC
EV574200       <-- GAGTGCTATTGTTCAGGTCGATGCCGCTCCTTTCAAGCAGTGGTACTTGC
EV540085       <-- GAGTGCTATTGTTCAGGTCGATGCCGCTCCTTTCAAGCAGTGGTACTTGC
FD539520       <-- GAGTGCTATTGTTCAGGTCGATGCCGCCCCTTTCAAGCAGTGGTACTTGC
FD583110       <-- GAGTGCTATTGTTCAGGTCGATGCCGCTCCTTTCAAGCAGTGGTACTTGC
EV540172       <-- GAGTGCTATTGTTCAGGTCGATGCTGCTCCTTTCAAGCAGTGGTACTTGC
EY903421       <-- GAGTGCTATTGTTCAGGTCGATGCTGCTCCTTTCAAGCAGTGGTACTTGC
EX774247       <-- GAGTGCTATTGTTCAGGTCGATGCCGCTCCTTTCAAGCAGTGGTACTTGC
EX886281       --> GAGTGCTATTGTTCAGGTCGATGCCGCTCCTTTCAAGCAGTGGTACTTGC
EY907503       --> GAGTGCTATTGTTCAGGTCGATGCTGCTCCTTTCAAGCAGTGGTACTTGC
FD955963       --> GAGTGCTATTGTTCAGGTCGATGCCGCTCCTTTCAAGCAGTGGTACTTGC
FD971826       --> GAGTGCTATTGTTCAGGTCGATGCTGCTCCTTTCAAGCAGTGGTACTTGC
FD562419       --> GAGTGCTATTGTTCAGGTCGATGCCGCTCCTTTCAAGCAGTGGTACTTGC
EV524512       --> GAGTGCTATTGTTCAGGTCGATGCCGCTCCTTTCAAGCAGTGGTACTTGC
EV535389       --> GAGTGCTATTGTTCAGGTCGATGCCGCTCCTTTCAAGCAGTGGTACTTGC
FD533459       --> GAGTGCTATTGTTCAGGTCGATGCCGCTCCTTTCAAGCAGTGGTACTTGC
EW717444       --> GAGTGCTATTGTTCAGGTCGATGCCGCTCCTTTCAAGCAGTGGTACTTGC
EV527566       --> GAGTGCTATTGTTCAGGTCGATGCCGCTCCTTTCAAGCAGTGGTACTTGC
EV569727       --> GAGTGCTATTGTTCAGGTCGATGCCGCTCCTTTCAAGCAGTGGTACTTGC
EV569920       --> GAGTGCTATTGTTCAGGTCGATGCCGCTCCTTTCAAGCAGTGGTACTTGC
EX905129       --> GAGTGCTATTGTTCAGGTCGATGCCGCTCCTTTCAAGCAGTGGTACTTGC
FD571626       --> GAGTGCTATTGTTCAGGTCGATGCCGCTCCTTTCAAGCAGTGGTACTTGC
FD579057       --> GAGTGCTATTGTTCAGGTCGATGCCGCTCCTTTCAAGCAGTGGTACTTGC
EV550362       --> GAGTGCTATTGTTCAGGTCGATGCCGCTCCTTTCAAGCAGTGGTACTTGC
FD979150       --> GAGTGCTATTGTTCAGGTCGATGCCGCTCCTTTCAAGCAGTGGTACTTGC
EV535509       --> GAGTGCTATTGTTCAGGTCGATGCTGCTCCTTTCAAGCAGTGGTACTTGC

               451    -    501
UN22243        --> AGCATTACGGAGTTGAGGTTGGTCGCAAGAAGAAGAGTGCTGCTTCTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX908903       <-- AGCATTACGGAGTTGGGGTTGGTCGCAAGAAGAAGAGTGCTGCTTCTGTC  Raphanus sativus cv Rat-Tail Radish #3870
EW721438       <-- AGCATTACGGAGTTGAGGTTGGTCGCAAGAAGAAGAGTGCTGCTTCTGTC  Raphanus sativus var. oleiformis
EV574347       <-- AGCATTACGGAGTTGAGGTTGGTCGCAAGAAAAAGAGTGCTGTTGCTGCT  Raphanus raphanistrum subsp. landra
FY441397       <-- AGCATTACGGAGTTGAGGTTGGTCGCAAGAAGAAGAGTGCTGCTTCTGTC  Raphanus sativus cv GSK3-1
FY442365       <-- AGCATTACGGAGTTGAGGTTGGTCGCAAGAAGAAGAGTGCTGCTTCTGTC  Raphanus sativus cv GSK3-1
FD967848       <-- AGCATTACGGAGTTGAGGTTGGTCGCAAGAAGAAGAGTGCTGCTTCTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV529493       <-- AGCATTACGGAGTTGAGGTTGGTCGCAAGAAGAAGAGTGCTGCTTCTGTC  Raphanus raphanistrum subsp. maritimus
FY442562       <-- AGCATTACGGAGTTGAGGTTGGTCGCAAGAAGAAGAGTGCTGCTTCTGTC  Raphanus sativus cv GSK3-1
EV574200       <-- AGCATTACGGAGTTGAGGTTGGTCGCAAGAAAAAGAGTGCTGTTGCTGCT  Raphanus raphanistrum subsp. landra
EV540085       <-- AGCACTACGGAGTTGAGGTTGGTCGCAAGAAGAAGAGTGCTGCTTCTGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539520       <-- AGCACTACGGAGTTGAGGTTGGTCGCAAGAAGAAGAGTGCTGCTTCTGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD583110       <-- AGCATTACGGAGTTGAGGTTGGTCGCAAGAAGAAGAGTGCTGCTTCTGTC  Raphanus sativus cv Rat-Tail Radish #3870
EV540172       <-- AGCATTACGGAGTTGAGGTTGGTCGCAAGAAGAAGAGTGCTGCTTCTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903421       <-- AGCATTACGGAGTTGAGGTTGGTCGCAAGAAGAAGAGTGCTGCTTCTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX774247       <-- AGCATTACGGAGTTGAGGTTGGTCGTAAGAAGAAGAGTGCTGTTGCTGCT  Raphanus raphanistrum subsp. landra
EX886281       --> AGCATTACGGAGTTGAGGTTGGTCGCAAGAAGAAGAGTGCTGCTTCTGTC  Raphanus sativus var. oleiformis
EY907503       --> AGCATTACGGAGTTGAGGTTGGTCGCAAGAAGAAGAGTGCTGCTTCTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955963       --> AGCATTACGGAGTTGAGGTTGGTCGCAAGAAGAAGAGTGCTGCTTCTGTC  Raphanus sativus cv Rat-Tail Radish #3870
FD971826       --> AGCATTACGGAGTTGAGGTTGGTCGCAAGAAGAAGAGTGCTGCTTCTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD562419       --> AGCATTACGGAGTTGAGGTTGGTCGCAAGAAGAAGAGTGCTGCTTCTGTC  Raphanus sativus var. oleiformis
EV524512       --> AGCATTACGGAGTTGAGGTTGGTCGCAAGAAGAAGAGTGCTGCTTCTGTC  Raphanus raphanistrum subsp. maritimus
EV535389       --> AGCACTACGGAGTTGAGGTTGGTCGCAAGAAGAAGAGTGCTGCTTCTGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD533459       --> AGCATTACGGAGTTGAGGTTGGTCGCAAGAAGAAGAGTGCTGTTGCTGCT  Raphanus raphanistrum subsp. maritimus
EW717444       --> AGCATTACGGAGTTGAGGTTGGTCGCAAGAAGAAGAGTGCTGCTTCTGTC  Raphanus sativus var. oleiformis
EV527566       --> AGCATTACGGAGTTGAGGTTGGTCGCAAGAAGAAGAGTGCTGTTGCTGCT  Raphanus raphanistrum subsp. maritimus
EV569727       --> AGCATTACGGAGTTGAGGTTGGTCGCAAGAAAAAGAGTGCTGTTGCTGCT  Raphanus raphanistrum subsp. landra
EV569920       --> AGCATTACGGAGTTGAGGTTGGTCGCAAGAAAAAGAGTGCTGTTGCTGCT  Raphanus raphanistrum subsp. landra
EX905129       --> AGCATTACGGAGTTGGGGTTGGTCGCAAGAAGAAGAGTGCTGCTTCTGTC  Raphanus sativus cv Rat-Tail Radish #3870
FD571626       --> AGCATTACGGAGTTGAGGTTGGTCGCAAGAAGAAGAGTGCTGCTTCTGTC  Raphanus sativus cv Early Scarlet Globe
FD579057       --> AGCATTACGGAGTTGAGGTTGGTCGCAAGAAGAAGAGTGCTGCTTCTGTC  Raphanus sativus cv Rat-Tail Radish #3870
EV550362       --> AGCATTACGGAGTTGAGGTTGGTCGCAAGAAGAAGAGTGCTGCTTCTGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979150       --> AGCATTACGGAGTTGAGGTTGGTCGCAATAAGAAGAGTGCTGCTTCTGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV535509       --> AGCATTACGGAGTTGAGGTTGGTCGCAAGAAGAAGAGTGCTGCTTCTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)

               501    -    551
UN22243        --> GCCGCCAAGAAGGACGGAGAGGAAGGTGAAGAAGCTGCTCCAGCTGCTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX908903       <-- GCCGCCAAGAAGGACGGAGAGGAAGGTGAAGAAGCTGCTCCAGCTGCTGC  Raphanus sativus cv Rat-Tail Radish #3870
EW721438       <-- GCCGCCAAGAAGGACGGAGAGGAAGGTGAAGAAGCTGCTCCAGCTGCCGC  Raphanus sativus var. oleiformis
EV574347       <-- GCGTCCAAGAAGGACGGAGAGGACGGTGAGGAAGCTGCTCCAGCTGCTGC  Raphanus raphanistrum subsp. landra
FY441397       <-- GCTGCCAAGAAAGACGGAGAGGAAGGTGATGAAGCTGCTCCAGCTGCTGC  Raphanus sativus cv GSK3-1
FY442365       <-- GCTGCCAAGAAAGACGGAGAGGAAGGTGATGAAGCTGCTCCAGCTGCTGC  Raphanus sativus cv GSK3-1
FD967848       <-- GCCGCCAAGAAGGACGGAGAGGATGGTGAAGAAGCTGCTCCAGCTGCTGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV529493       <-- GCCGCCAAGAAGGACGGAGAGGAAGGTGATGAAGCTGCTCCAGCTGCTGC  Raphanus raphanistrum subsp. maritimus
FY442562       <-- GCTGCCAAGAAAGACGGAGAGGAAGGTGATGAAGCTGCTCCAGCTGCTGC  Raphanus sativus cv GSK3-1
EV574200       <-- GCGTCCAAGAAGGACGGAGAGGACGGTGAGGAAGCTGCTCCAGCTGCTGC  Raphanus raphanistrum subsp. landra
EV540085       <-- GCCGCCAAGAAGGACGGAGAGGAAGGTGATGAAGCTGCTCCAGCTGCTAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539520       <-- GCCGCCAAGAAGGACGGAGAGGACGGTGAGGAAGCTCCTCCAGCTGCTGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD583110       <-- GCCGCCAAGAAGGACGGAGAGGAAGGTGAAGAAGCTGCTCCAGCTGCTGC  Raphanus sativus cv Rat-Tail Radish #3870
EV540172       <-- GCCGCCAAGAAGGACGGAGAGGATGGTGAAGAAGCTGCTCCAGCTGCTGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903421       <-- GCCGCCAAGAAGGACGGAGAGGATGGTGAAGAAGCTGCTCCAGCTGCTGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX774247       <-- GCGTCCAAGAAGGACGGAGAGGAAGCTGATGAAGCTGCACCAGCTGCTGC  Raphanus raphanistrum subsp. landra
EX886281       --> GCCGCCAAGAAGGACGGAGAGGAAGGTGAAGAAGCTGCTCCAGCTGCTGC  Raphanus sativus var. oleiformis
EY907503       --> GCCGCCAAGAAGGACGGAGAGGATGGTGAAGAAGCTGCTCCAGCTGCTGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955963       --> GCCGCCAAGAAGGACGGAGAGGAAGGTGAAGAAGCTGCTCCAGCTGCTGC  Raphanus sativus cv Rat-Tail Radish #3870
FD971826       --> GCCGCCAAGAAGGACGGAGAGGATGGTGAAGAAGCTGCTCCAGCTGCTGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD562419       --> GCCGCCAAGAAGGACGGAGAGGAAGGTGAAGAAGCTGCTCCAGCTGCTGC  Raphanus sativus var. oleiformis
EV524512       --> GCCGCCAAGAAGGACGGAGAGGAAGGTGATGAAGCTGCTCCAGCTGCTGC  Raphanus raphanistrum subsp. maritimus
EV535389       --> GCCGCCAAGAAGGACGGAGAGGAAGGTGATGAAGCTGCTCCAGCTGCTAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD533459       --> GCGTCCAAGAAGGACGGAGAGGACGGTGAGGAAGCTGCTCCAGCTCCTGC  Raphanus raphanistrum subsp. maritimus
EW717444       --> GCCGCCAAGAAGGACGGAGAGGAAGGTGAAGAAGCTGCTCCAGCTGCCGC  Raphanus sativus var. oleiformis
EV527566       --> GCGTCCAAGAAGGACGGAGAGGACGGTGAGGAAGCTGCTCCAGCTGCTGC  Raphanus raphanistrum subsp. maritimus
EV569727       --> GCGTCCAAGAAGGACGGAGAGGACGGTGAGGAAGCTGCTCCAGCTGCTGC  Raphanus raphanistrum subsp. landra
EV569920       --> GCGTCCAAGAAGGACGGAGAGGACGGTGAGGAAGCTGCTCCAGCTGCTGC  Raphanus raphanistrum subsp. landra
EX905129       --> GCCGCCAAGAAGGACGGAGAGGAAGGTGAAGAAGCTGCTCCAGCTGCTGC  Raphanus sativus cv Rat-Tail Radish #3870
FD571626       --> GCCGCCAAGAAGGACGGAGAGGAAGGTGAAGAAGCTGCTCCAGCTGCTGC  Raphanus sativus cv Early Scarlet Globe
FD579057       --> GCCGCCAAGAAGGACGGAGAGGAAGGTGAAGAAGCTGCTCCAGCTGCTGC  Raphanus sativus cv Rat-Tail Radish #3870
EV550362       --> GCCGCCAAGAAGGACGGAGAGGAAGGTGAAGAAGCTGCTCCAGCTGCTGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979150       --> GCCGCCAAGAAGGACGGAGAGGAAGGTGAAGAAGCTGCTCCAGCTGCTGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV535509       --> GCCGCCAAGAAGGACGGAGAGGATGGTGAAGAAGCTGCTCCAGCTGCTGC  Raphanus raphanistrum subsp. raphanistrum (MS)

               551    -    601
UN22243        --> --C-GCTCCTGAGGAGACCAAGAAGAGTAACCACGTCTTGAGGAAGATCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX908903       <-- --C-GCTCCTGAGGAGACCAAGAAGAGTAACCACGTCTTGAGGAAGATCG  Raphanus sativus cv Rat-Tail Radish #3870
EW721438       <-- --C-GCTCCTGAGGAGACCAAGAAGAGTAACCACGTCTTGAGGAAGATCG  Raphanus sativus var. oleiformis
EV574347       <-- --T-GCTCCTGAGGAGACCAAGAAGAGTAACCACGTCTTGAGGAAGATCG  Raphanus raphanistrum subsp. landra
FY441397       <-- TGCTGCTCCTGAGGAGACCAAGAAGAGTAACCACGTCTTGAGGAAGATCG  Raphanus sativus cv GSK3-1
FY442365       <-- TGCTGCTCCTGAGGAGACCAAGAAGAGTAACCACGTCTTGAGGAAGATCG  Raphanus sativus cv GSK3-1
FD967848       <-- --C-GCTCCTGAGGAGACCAAGAAGAGTAACCACGTCTTGAGGAAGATCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV529493       <-- --C-GCTCCTGAGGAGACCAAGAAGAGTAACCACGTCTTGAGGAAGATCG  Raphanus raphanistrum subsp. maritimus
FY442562       <-- TGCTGCTCCTGAGGAGACCAAGAAGAGTAACCACGTCTTGAGGAAGATCG  Raphanus sativus cv GSK3-1
EV574200       <-- --T-GCTCCTGAGGAGACCAAGAAGAGTAACCACGTCTTGAGGAAGATCG  Raphanus raphanistrum subsp. landra
EV540085       <-- --C-GCTCCTGAGGAGACCAAGAAGAGTAACCATGTCTTGAGGAAGATCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539520       <-- --T-GCTCCTGAGGAGACCAAGAAGAGTAACCACGTCTTGAGGAAGATCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD583110       <-- --C-ACTCCTGAGGAGACCAAGAAGAGTAACCACGTCTTGAGGAAGATCG  Raphanus sativus cv Rat-Tail Radish #3870
EV540172       <-- --C-GCTCTTGAGGAGACCAAGAAGAGTAACCACGTCTTGAGGAAGATCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903421       <-- --C-GCTCCTGAGGAGACCAAGAAGAGTAACCACGTCTTGAGGAAGATCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX774247       <-- --T-GCTCCTGAGGAGACCAAGAAGAGTAACCACGTCTTGAGGAAGATCG  Raphanus raphanistrum subsp. landra
EX886281       --> --C-GCTCCTGAGGAGACCAAGAAGAGTAACCACGTCTTGAGGAAGATCG  Raphanus sativus var. oleiformis
EY907503       --> --C-GCTCCTGAGGAGACCAAGAAGAGTAACCACGTCTTGAGGAAGATCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955963       --> --C-GCTCCTGAGGAGACCAAGAAGAGTAACCACGTCTTGAGGAAGATCG  Raphanus sativus cv Rat-Tail Radish #3870
FD971826       --> --C-GCTCCTGAGGAGACCAAGAAGAGTAACCACGTCTTGAGGAAGATCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD562419       --> --C-GCTCCTGAGGAGACCAAGAAGAGTAACCACGTCTTGAGGAAGATCG  Raphanus sativus var. oleiformis
EV524512       --> --C-GCTCCTGAGGAGACCAAGAAGAGTAACCACGTCTTGAGGAAGATCG  Raphanus raphanistrum subsp. maritimus
EV535389       --> --C-GCTCCTGAGGAGACCAAGAAGAGTAACCATGTCT............  Raphanus raphanistrum subsp. raphanistrum (MS)
FD533459       --> --T-GCTCCTGAGGAGAC-AAGAAGAGTAACCACGTCTTGAGGAAGATCG  Raphanus raphanistrum subsp. maritimus
EW717444       --> --C-GCTCCTGAGGAGACCAAGAAGAGTAACCACGTCTTGAGGAAGATCG  Raphanus sativus var. oleiformis
EV527566       --> --T-GCTCCTGAGGAGACCAAGAAGAGTAACCACGTCTTGAGGAAGATCG  Raphanus raphanistrum subsp. maritimus
EV569727       --> --T-GCTCCTGAGGAGACCAAGAAGAGTAACCACGTCTTGAGGAAGATCG  Raphanus raphanistrum subsp. landra
EV569920       --> --T-GCTCCTGAGGAGACCAAGAAGAGTAACCACGTCTTGAGGAAGATCG  Raphanus raphanistrum subsp. landra
EX905129       --> --C-GCTCCTGAGGAGACCAAGAAGAGTAACCACGTCTTGAGGAAGATCG  Raphanus sativus cv Rat-Tail Radish #3870
FD571626       --> --C-GCTCCTGAGGAGACCAAGAAGAGTAACCACGTCTTGAGGAAGATCG  Raphanus sativus cv Early Scarlet Globe
FD579057       --> --C-ACTCCTGAGGAGACCAAGAAGAGTAACCACGTCTTGAGGAAGATCG  Raphanus sativus cv Rat-Tail Radish #3870
EV550362       --> --C-GCTCCTGAGGAGACCAAGAAGAGTAACCACGTCTTGAGGAAGATCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979150       --> --C-GCTCCTGAGGAGACCAAGAAGAGTAACCACGTCTTGAGGAAGATCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV535509       --> --C-GCTCTTGAGGAGACCAAGAAGAGTAACCACGTCTTGAGGAAGATCG  Raphanus raphanistrum subsp. raphanistrum (MS)

               601    -    651
UN22243        --> AGAGCCGTCAAGAGGGACGCAGCCTTGATTCCCACATCGAGGATCAATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX908903       <-- AGAGCCGTCAAGAGGGACGCAGCCTTGATTCCCACATCGAGGATCAATTC
EW721438       <-- AGAGCCGTCAAGAGGGACGCAGCCTTGATTCCCACATCGAGGATCAATTC
EV574347       <-- AGAGCCGTCAAGAGGGTCGCAGCCTTGATTCCCACATCGAGGATCAATTC
FY441397       <-- AGAGCCGTCAAGAGGGACGCAGCCTTGATTCCCACATCGAGGATCAATTC
FY442365       <-- AGAGCCGTCAAGAGGGACGCAGCCTTGATTCCCACATCGAGGATCAATTC
FD967848       <-- AGAGCCGTCAAGAGGGTCGCAGCCTTGATTCCCACATCGAGGATCAATTC
EV529493       <-- AGAGCCGTCAAGAGGGACGCAGCCTTGATTCCCACATCGAGGATCAATTC
FY442562       <-- AGAGCCGTCAAGAGGGACGCAGCCTTGATTCCCACATCGAGGATCAATTC
EV574200       <-- AGAGCCGTCAAGAGGGTCGCAGCCTTGATTCCCACATCGAGGATCAATTC
EV540085       <-- AGAGCCGTCAAGAGGGACGCAGCCTTGATTCCCACATCGAGGATCAATTC
FD539520       <-- AGAGCCGTCAAGAGGGACGCAGCCTTGATTCCCACATCGAGGATCAATTC
FD583110       <-- AGAGCCGTCAAGAGGGACGCAGCCTTGATTCCCACATCGAGGATCAATTC
EV540172       <-- AGAGCCGTCAAGAGGGTCGCAGCCTTGATTCCCACATCGAGGATCAATTC
EY903421       <-- AGAGCCGTCAAGAGGGTCGCAGCCTTGA--TCCACATCGAGGATCAATTC
EX774247       <-- AGAGCCGTCAAGAGGGACGCAGCCTTGATTCCCACATCGAGGATCAATTC
EX886281       --> AGAGCCGTCAAGAGGGACGCAGCCTTGATTCCCACATCGAGGATCAATTC
EY907503       --> AGAGCCGTCAAGAGGGTCGCAGCCTTGAT--CCACATCGAGGATCAATTC
FD955963       --> AGAGCCGTCAAGAGGGACGCAGCCTTGATTCCCACATCGAGGATCAATTC
FD971826       --> AGAGCC............................................
FD562419       --> AGAGCCGTCAAGAGGGACGCAGCCTTGATTCCCACATCGAGGATCAATTC
EV524512       --> AGAGCCGTCAAGAGGGACGCAGCCTTGATTCCCACATCGAGGATCAATTC
EV535389       --> ..................................................
FD533459       --> AGAGCCGTCAAGAGGGTCGCAGCCTTGATTCCCACATCGAGGATCAATTC
EW717444       --> AGAGCCGTCAAGAGGGACGCAGCCTTGATTCCCACATCGAGGATCAATTC
EV527566       --> AGAGCCGTCAAGAGGGTCGCAGCCTTGATTCCCACATCGAGGATCAATTC
EV569727       --> AGAGCCGTCAAGAGGGTCGCAGCCTTGATTCCCACATCGAGGATCAATTC
EV569920       --> AGAGCCGTCAAGAGGGTCGCAGCCTTGATTCCCACATCGAGGATCAATTC
EX905129       --> AGAGCCGTCAAGAGGGACGCAGCCTTGATTCCCACATCGAGGATCAATTC
FD571626       --> AGAGCCGTCAAGAGGGACGCAGCCTTGATTCCCACATCGAGGATCAATTC
FD579057       --> AGAGCCGTCAAGAGGGACGCAGCCTTGATTCCCACATCGAGGATCAATTC
EV550362       --> AGAGCCATCAAGAGGGACGCAGCCTTGATTCCCACATCGAGGATCAATTC
FD979150       --> AGAGCCGTCAAGAGGGACGCAGCCTTGATTCCCACATCGAGGATCAATTC
EV535509       --> AGAGCCGTCAAGAGGGTCGCAGCCTTGATTCCCACATCGAGGATCAATTC

               651    -    701
UN22243        --> GCTAGCGGACGTCTGTTGGCTTGCATCTCATCTAGGCCAGGCCAGTGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX908903       <-- GCTAGCGGACGTCTGTTGGCTTGCATCTCATCTAGGCCAGGCCAGTGTGG
EW721438       <-- GCTAGCGGACGTCTGTTGGCTTGCATCTCATTTAGGCCAGGCCAGTGTGG
EV574347       <-- GCTAGCGGACGTCTGTTGGCTTGCATCTCATTTAGGCCAGGCCAGTGTGG
FY441397       <-- GCTAGCGGACGTCTGTTGGCTTGCATCTCATCTAGGCCAGGCCAGTGTGG
FY442365       <-- GCTAGCGGACGTCTGTTGGCTTGCATCTCATCTAGGCCAGGCCAGTGTGG
FD967848       <-- GCTAGCGGACGTCTGTTGGCTTGCATCTCATCTAGGCCTGGCCAGTGTGG
EV529493       <-- GCTAGCGGACGTCTGTTGGCTTGCATCTCATCTAGGCCAGGCCAGTGTGG
FY442562       <-- GCTAGCGGACGTCTGTTGGCTTGCATCTCATCTAGGCCAGGCCAGTGTGG
EV574200       <-- GCTAGCGGACGTCTGTTGGCTTGCATCTCATTTAGGCCAGGCCAGTGTGG
EV540085       <-- GCTAGCGGACGTCTGTTGGCTTGCATCTCATCTAGGCCTGGCCAGTGTGG
FD539520       <-- GCTAGCGGACGTCTGTTGGCTTGCATCTCATTTAGGCCAGGCCAGTGTGG
FD583110       <-- GCTAGCGGACGTCTGTTGGCTTGCATCTCATTTAGGCCAGGCCAGTGTGG
EV540172       <-- GCTAGCGGACGTCTGTTGGCTTGCATCTCATCTAGGCCTGGCCAGTGTGG
EY903421       <-- GCTAGCGGACGTCTGTTGGCTTGCATCTCATCTAGGCCTGGCCAGTGTGG
EX774247       <-- GCTAGCGGACGTCTGTTGGCTTGCATCTCATCTAGGCCAGGCCAGTGTGG
EX886281       --> GCTAGCGGACGTCTGTTGGCTTGCATCTCATCTAGGCCAGGCCAGTGTGG
EY907503       --> GCTAGCGGACGTCT....................................
FD955963       --> GCTAGCGGACGTCTGTTGGCTTGCATCTCAT...................
FD971826       --> ..................................................
FD562419       --> GCTAGCGGACGTCTGTTGGCTTGCATCTCATCTAGGCCAGGCCAGTGTGG
EV524512       --> GCTAGCGGACGTCTGTTGGCTTGCATCTCAT...................
EV535389       --> ..................................................
FD533459       --> GCTAGCGGACGTCTGTTGGCTTGCATCTCATCTAG-CCAGGCCAGTGTGG
EW717444       --> GCTAGCGGACGTCTGTTGGCTTGCATCTCATCTAGGCCAGGCCAGTGTGG
EV527566       --> GCTAGCGGACGTCTGTTGGCTTGCATCTCATCTAGGCCAGGCCAGTGTGG
EV569727       --> GCTAGCGGACGTCTGTTGGCTTGCATCTCATCTAGGCCAGGCCAGTGTGG
EV569920       --> GCTAGCGGACGTCTGTTGGCTTGCATCTCATCTAGGCCAGGCCAGTGTGG
EX905129       --> GCTAGCGGACGTCTGTTGGCTTGCATCTCATCTAGGCCAGGCCAGTGTGG
FD571626       --> GCTAGCGGACGTCTGTTGGCTTGCATCTCATCTAG-CCAGGCCAGTGTGG
FD579057       --> GCTAGCGGACGTCTGTTGGCTTGCATCTCATCTAGGCCAGGCCAGTGTGG
EV550362       --> GCTAGCGGACGTCTGTTGGCTTGCATCTCATCTAGGCCAGGCCAGTGTGG
FD979150       --> GCTAGCGGACGTCTGTTGGCTTGCATCTCATC..................
EV535509       --> GCTAGCGGACGTCTGTTGGCTTGCATCTCATCTAGGCCTGGCCAGTGTGG

               701    -    751
UN22243        --> ACGTGCCGATGGATACATTCTGGAAGGCAAAGAGCTAGAGTTCTACCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX908903       <-- ACGTGCCGATGGATACATTCTGGAAGGCAAAGAGCTAGAGTTCTACCAGA
EW721438       <-- ACGTGCCGATGGATACATTCTGGAAGGCAAAGAGCTAGAGTTCTACCAGA
EV574347       <-- ACGTGCCGATGGATACATTCTGGAAGGCAAAGAGCTAGAGTTCTACCAGA
FY441397       <-- ACGTGCCGATGGATACATTCTGGAAGGCAAAGAGCTAGAGTTCTACCAGA
FY442365       <-- ACGTGCCGATGGATACATTCTGGAAGGCAAAGAGCTAGAGTTCTACCAGA
FD967848       <-- ACGTGCCGATGGATACATTCTGGAAGGCAAAGAGCTAGAGTTCTACCAGA
EV529493       <-- ACGTGCCGATGGATACATTCTGGAAGGCAAAGAGCTAGAGTTCTACCAGA
FY442562       <-- ACGTGCCGATGGATACATTCTGGAAGGCAAAGAGCTAGAGTTCTACCAGA
EV574200       <-- ACGTGCCGATGGATACATTCTGGAAGGCAAAGAGCTAGAGTTCTACCAGA
EV540085       <-- ACGTGCCGATGGATACATTCTGGAAGGCAAAGAGCTAGAGTTCTACCAGA
FD539520       <-- ACGTGCCGATGGATACATTCTGGAAGGCAAAGAGCTAGAGTTCTACCAGA
FD583110       <-- ACGTGCCGATGGATACATTCTGGAAGGCAAAGAGCTAGAGTTTTACCAGA
EV540172       <-- ACGTGCCGATGGATACATTCTGGAAGGCAAAGAGCTAGAGTTCTACCAGA
EY903421       <-- ACGTGCCGATGGATACATTCTGGAAGGCAAAGAGCTAGAGTTCTACCAGA
EX774247       <-- ACGTGCCGATGGATACATTCTGGAAGGCAAAGAGCTAGAGTTCTACCAGA
EX886281       --> ACGTGCCGATGGATACATTCTGGAAG-CAAAGAGCTAGAGTTCT......
EY907503       --> ..................................................
FD955963       --> ..................................................
FD971826       --> ..................................................
FD562419       --> ACGTGCCGATGGATACATTCTGGAAG-CAAAGAGCTAGAGTTCTA.....
EV524512       --> ..................................................
EV535389       --> ..................................................
FD533459       --> ACGTGCCGATGGATACATTCTGGAAG-CAAAGAGCTAGAGTTCT......
EW717444       --> ACGTGCCGATGGATACATTCTG............................
EV527566       --> ACGTGCCGATGGATACATTCTGGAAAGCAAAGAGCTAGAGTTCTACCAGA
EV569727       --> ACGTGCCGATGGATACATTCTGGAAAGCAAAGAGCTAGAGTTCTACCAGA
EV569920       --> ACGTGCCGATGGATACATTCTGGAAGGCAAAGAGCTAGAGTTCTACCAGA
EX905129       --> ACGTGCCGATGGATACATTCTGGA..........................
FD571626       --> ACGTGCCGATGGATACATTCTGGAAG-CAAAGAGCTAGAGTTCTACC...
FD579057       --> ACGTGCCGATGGATACATTCTG............................
EV550362       --> ACGTGCCGATGGATACATTCTGGAA.........................
FD979150       --> ..................................................
EV535509       --> ACGTGCCGATGGATACATTCTGGAAGGCAAAGAGCTAGAGTTCTACCAGA

               751    -    801
UN22243        --> AGAAGATCCAGAAGAAGAAGGGAAAGGGTGCCGCTTAAAAGCTTCACTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX908903       <-- AGAAGATCCAGAAGAAGAAGGGAAAGGGTGCCGCTTAAAAGCTTCACTTT  Raphanus sativus cv Rat-Tail Radish #3870
EW721438       <-- AGAAGATCCAGAAGAAGAAGGGAAAGGGTGCCGCTTAAAAGCTTCACTTT  Raphanus sativus var. oleiformis
EV574347       <-- AGAAGATCCAGAAGAAGAAGGGAAAGGGTGCCGCTTAAAAGCTTCACTTT  Raphanus raphanistrum subsp. landra
FY441397       <-- AGAAGATCCAGAAGAAGAAGGGAAAGGGTGCCGCTTAAAAGCTTCACTTT  Raphanus sativus cv GSK3-1
FY442365       <-- AGAAGATCCAGAAGAAGAAGGGAAAGGGTGCCGCTTAAAAGCTTCACTTT  Raphanus sativus cv GSK3-1
FD967848       <-- AGAAGATCCAGAAGAAGAAGGGAAAGGGTGCCGCTTAAAAGCTACACTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV529493       <-- AGAAGATCCAGAAGAAGAAGGGAAAGGGTGCCGCTTAAAAGCTTCACTTT  Raphanus raphanistrum subsp. maritimus
FY442562       <-- AGAAGATCCAGAAGAAGAAGGGAAAGGGTGCCGCTTAAAAGCTTCACTTT  Raphanus sativus cv GSK3-1
EV574200       <-- AGAAGATCCAGAAGAAGAAGGGAAAGGGTGCCGCTTAAAAGCTTCACTTT  Raphanus raphanistrum subsp. landra
EV540085       <-- AGAAGATCCAGAAGAAGAAGGGAAAGGGTGCCGCTTAAAAGCTACACTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539520       <-- AGAAGATCCAGAAGAAGAAGGGAAAGGGTGCCGCTTAAAAGCTACACTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD583110       <-- AGAAGATCCAGAAGAAGAAGGGAAAGGGTGCCGCTTAAAAGCTTCACTTT  Raphanus sativus cv Rat-Tail Radish #3870
EV540172       <-- AGAAGATCCAGAAGAAGAAGGGAAAGGGTGCCGCTTAAAAGCTACACTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903421       <-- AGAAGATCCAGAAGAAGAAGGGAAAGGGTGCCGCTTAAAAGCTACACTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX774247       <-- AGAAGATCCAGAAGAAGAAGGGAAAGGGTGCCGCTTAAAAGCTTCACTTC  Raphanus raphanistrum subsp. landra
EX886281       --> ..................................................  Raphanus sativus var. oleiformis
EY907503       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955963       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD971826       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD562419       --> ..................................................  Raphanus sativus var. oleiformis
EV524512       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV535389       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD533459       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW717444       --> ..................................................  Raphanus sativus var. oleiformis
EV527566       --> AGAAGATCCAGAA.....................................  Raphanus raphanistrum subsp. maritimus
EV569727       --> AGAAGATCCAGAAG....................................  Raphanus raphanistrum subsp. landra
EV569920       --> AGAAGATCCAGAAGAAGAAGGGAAAGGGTGCCGCTTAAAAGCTTCACTTT  Raphanus raphanistrum subsp. landra
EX905129       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD571626       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD579057       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV550362       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979150       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV535509       --> AGAAGATCCAGAAGAAGAAGGGAAAGGGTGCCGCTTAAAAGCTACACTTC  Raphanus raphanistrum subsp. raphanistrum (MS)

               801    -    851
UN22243        --> TTTACTTTCAAACTTTTTTTTT--GTCTTATCATCAAA-CATGTTTTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX908903       <-- TTTACTTTCAAACTTTTTTTTT-TGTCTTATCATCAAA-CATGTTTTGAG
EW721438       <-- TTTACTTTCAAACTTTTTTTTT--GTCTTATCATCAAA-CATGTTTTGAG
EV574347       <-- TTTACTTTCAAACTTTTTTTTT-TATCTTATCATCAAA-CATGTTTTGAG
FY441397       <-- TTTACTTTCAAACTTTTTTTTT--GTCTTATCATCAAA-CATGTTTTGAG
FY442365       <-- TTTACTTTCAAACTTTTTTTTT--GTCTTATCATCAAA-CATGTTTTGAG
FD967848       <-- TTTACTTTCAAACTTTTTTTT---GTCTTATCATCAAA-CATGTTTTGAG
EV529493       <-- TTTACTTTCAAACTTTTTTTTT--GTCTTATCATCAAA-CATGTTTTGAG
FY442562       <-- TTTACTTTCAAACTTTTTTTTT--GTCTTATCATCAAA-CATGTTTTGAG
EV574200       <-- TTTACTTTCAAACTTTTTTTTT-TATCTTATCATCAAA-CATGTTTTGAG
EV540085       <-- TTTATTTTCAAACTTTTTTTTTTTGTCTTATCATCAAA-CATGTTTTGAG
FD539520       <-- TTTACTTTCAAACTTTTTTTTT--GTCTTATCATCAAA-CATGTTTTGAG
FD583110       <-- TTTACTTTCAAACTTTTTTTTT-TGTCTTATCATCAAA-CATGTTTTGAG
EV540172       <-- TTTACTTTCAAACTTTTTTTTT--GTCTTATCATCAAA-CATGTTTTGAG
EY903421       <-- TTTACTTTCAAACTTTTTTTTT--GTCTTATCATCAAA-CATGTTTTGAG
EX774247       <-- TTTACTTTCAAACTTTTTTTTT--GTTTCATCATCAAAACATGTTTTGAG
EX886281       --> ..................................................
EY907503       --> ..................................................
FD955963       --> ..................................................
FD971826       --> ..................................................
FD562419       --> ..................................................
EV524512       --> ..................................................
EV535389       --> ..................................................
FD533459       --> ..................................................
EW717444       --> ..................................................
EV527566       --> ..................................................
EV569727       --> ..................................................
EV569920       --> TTTACTTTCAAACTTTTTT...............................
EX905129       --> ..................................................
FD571626       --> ..................................................
FD579057       --> ..................................................
EV550362       --> ..................................................
FD979150       --> ..................................................
EV535509       --> TTTACTTTCAAACTTTTTTTTT--GTCTTATCATCAAA-CATGTTTTGAG

               851    -    901
UN22243        --> TTTCA------GTTTC------TACTATTGTCTGAGAACCCGAGATGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX908903       <-- TTTCA------GTTTC------TACTATTGTCTGAGAACCCGAGATGCTT
EW721438       <-- TTTCA------GTTTC------TACTATTGTCTGAGAACCCGAGATGCTT
EV574347       <-- TTTCA------GTTTC------TACTATTGTCTGAGAACCCGAGATGCTT
FY441397       <-- TTTCA------GTTTC------TACTATTGTCTGAGAACCCGAGATGCTT
FY442365       <-- TTTCA------GTTTC------TACTATTGTCTGAGAACCCGAGATGCTT
FD967848       <-- TTTCA------GTTTCAGTTTCTACTATTGTCTGAGAACCCGAGATGCTT
EV529493       <-- TTTCA------GTTTC------TACTATTGTCTGAGAACCCGAGATGCTT
FY442562       <-- TTTCA------GTTTC------TACTATTGTCTGAGAACCCGAGATGCTT
EV574200       <-- TTTCA------GTTTC------TACTATTGTCTGAGAACCCGAGATGCTT
EV540085       <-- TTTCA------GTTTT------TACTATTGTCTGAGAACCCGAGATGCTT
FD539520       <-- TTTCA------GTTTC------TACTATTGTCTGAGAACCCGAGATGCTT
FD583110       <-- TTTCA------GTTTC------TACTATTGTCTGAGAACCCGAGATGCTT
EV540172       <-- TTTCATTTTCAGTTTC------TACTATTGTCTGAGAACCCGAGATGCTT
EY903421       <-- TTTCA------GTTTCAGTTTCTACTATTGTCTGAGAACCCGAGATGCTT
EX774247       <-- TTTCA------GTTTC------TACTATTGTCTGAGAACCCGAGATGCTT
EX886281       --> ..................................................
EY907503       --> ..................................................
FD955963       --> ..................................................
FD971826       --> ..................................................
FD562419       --> ..................................................
EV524512       --> ..................................................
EV535389       --> ..................................................
FD533459       --> ..................................................
EW717444       --> ..................................................
EV527566       --> ..................................................
EV569727       --> ..................................................
EV569920       --> ..................................................
EX905129       --> ..................................................
FD571626       --> ..................................................
FD579057       --> ..................................................
EV550362       --> ..................................................
FD979150       --> ..................................................
EV535509       --> TTTCATTTTCAGTTTC------TACTATTGTCTGAGAACCCGAGATGCTT

               901    -    951
UN22243        --> TTGGATTAGCTTGCAATGATATTTCATAAACTACCCCATCAGTTAATTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX908903       <-- TTGGATTAGCTTGCAATGATATTTCATAAACTACCCCATC..........
EW721438       <-- TTGGATTAGCTTGCAATGATATTTCATAAACTACCCCATCAGTTAATTAc
EV574347       <-- TTGGATTAGCTTGCAATGATATTTCATAAACTACCCCg............
FY441397       <-- TTGGATTAGCTTGCAATGATATTc..........................
FY442365       <-- TTGGATTAGCTTGCAATG................................
FD967848       <-- TTGGATTAGCTTGCAATGATATTTCATAAACTACCCCATCAGTTAATTAT
EV529493       <-- TTGGATTAGCTTGCAATGATATTTCATAAACTACCCCATCAGTTAATTAT
FY442562       <-- TTGGATTAGCTTGCAATGATATTTCATAAACTACCCCATC..........
EV574200       <-- TTGGATTAGCTTGCAATGATATTTCATAAACTACCCCg............
EV540085       <-- TTGGATTAGCTTGCAATGATATTTCATAAACTACCCCATCAGTTAATTAT
FD539520       <-- TTGGATTAGCTTGCAATGATATTTCATAAACTACCCCATCAGTTAATTAT
FD583110       <-- TTGGATTAGCTTGCAATGATATTTCATAAACTACCCCATC..........
EV540172       <-- TTGGATTAGCTTACAATGATATTTCATAAACT..................
EY903421       <-- TTGGATTAGCTTGCAATGATATTTCATAAACTACCCCATCAGTTAATTAT
EX774247       <-- TTGGATTAGCTTGCAATGATATTTCATAAACTACCCCATC..........
EX886281       --> ..................................................
EY907503       --> ..................................................
FD955963       --> ..................................................
FD971826       --> ..................................................
FD562419       --> ..................................................
EV524512       --> ..................................................
EV535389       --> ..................................................
FD533459       --> ..................................................
EW717444       --> ..................................................
EV527566       --> ..................................................
EV569727       --> ..................................................
EV569920       --> ..................................................
EX905129       --> ..................................................
FD571626       --> ..................................................
FD579057       --> ..................................................
EV550362       --> ..................................................
FD979150       --> ..................................................
EV535509       --> TTGGATTAGCTTACAATGATATTTCATAAACT..................

               951    -   1001
UN22243        --> GCTCTACAATGTCTGTCTCTTATTTTTTTGTTTAATTTTGACATCTTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX908903       <-- ..................................................
EW721438       <-- ..................................................
EV574347       <-- ..................................................
FY441397       <-- ..................................................
FY442365       <-- ..................................................
FD967848       <-- GCTt..............................................
EV529493       <-- GCTCTAac..........................................
FY442562       <-- ..................................................
EV574200       <-- ..................................................
EV540085       <-- GCTCTACg..........................................
FD539520       <-- GCTCTACAATGTCTGTCTCTTATTTTTTTGTTTAATTTTGACATCTTTCA
FD583110       <-- ..................................................
EV540172       <-- ..................................................
EY903421       <-- GCac..............................................
EX774247       <-- ..................................................
EX886281       --> ..................................................
EY907503       --> ..................................................
FD955963       --> ..................................................
FD971826       --> ..................................................
FD562419       --> ..................................................
EV524512       --> ..................................................
EV535389       --> ..................................................
FD533459       --> ..................................................
EW717444       --> ..................................................
EV527566       --> ..................................................
EV569727       --> ..................................................
EV569920       --> ..................................................
EX905129       --> ..................................................
FD571626       --> ..................................................
FD579057       --> ..................................................
EV550362       --> ..................................................
FD979150       --> ..................................................
EV535509       --> ..................................................

               1001   -   1051
UN22243        --> TATGAATATGATATTACGAACTATGCACCTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX908903       <-- ................................
EW721438       <-- ................................
EV574347       <-- ................................
FY441397       <-- ................................
FY442365       <-- ................................
FD967848       <-- ................................
EV529493       <-- ................................
FY442562       <-- ................................
EV574200       <-- ................................
EV540085       <-- ................................
FD539520       <-- TATGAATATGATATTACGAACTATGCACCTAC
FD583110       <-- ................................
EV540172       <-- ................................
EY903421       <-- ................................
EX774247       <-- ................................
EX886281       --> ................................
EY907503       --> ................................
FD955963       --> ................................
FD971826       --> ................................
FD562419       --> ................................
EV524512       --> ................................
EV535389       --> ................................
FD533459       --> ................................
EW717444       --> ................................
EV527566       --> ................................
EV569727       --> ................................
EV569920       --> ................................
EX905129       --> ................................
FD571626       --> ................................
FD579057       --> ................................
EV550362       --> ................................
FD979150       --> ................................
EV535509       --> ................................