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Alignment for radish unigene UN22258

               1      -     51
UN22258        --> AGGATTCATGTAAAAAAAACATCATCTATCTGTAGTAATCCTCCGAGGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727839       <-- ..................................................
EX752871       <-- ..................................................
EY935802       <-- ..................................................
EX775953       <-- ..................................................
FD555389       <-- ..................................................
EV573618       <-- ..................................................
EW730424       <-- ..................................................
FD552964       <-- ..................................................
FD553813       <-- ..................................................
FD553122       <-- ..................................................
EY911191       <-- ..................................................
FD557780       --> AGGATTCATGTAAAAAAAACATCATCTATCTGTAGTAATCCTCCGAGGCG
EW723033       --> .GGATTCATGTAAAAAAAACATCATCTATCTGTAGTAATCCTCCGAGGCG
EX749089       --> .GGATTCATGTAAAAAAAACATCATCTATCTGTAGTAATCCTCCGAGGCG
EX771877       --> .GGATTCATGTAAAAAAAACATCATCTATCTGTAGTAATCCTCCGAGGCG
EY939960       --> .GGATTCATGTAAAAAAAACATCATCTATCTGTAGTAATCCTCCGAGGCG
FD556901       --> .GGATTCATGTAAAAAAAACATCATCTATCTGTAGTAATCCTCCGAGGCG
FD559736       --> .GGATTCATGTAAAAAAAACATCATCTATCTGTAGTAATCCTCCGAGGCG
FD556713       --> ..GATTCATGTAAAAAAAACATCATCTATCTGTAGTAATCCTCCGAGGCG
EY915323       --> .....ggATGTAAAAAAAACATCATCTATCTGTAGTAATCCTCCGAGGCG
EY941045       --> .....ggATGTAAAAAAAACATCATCTATCTGTAGTAATCCTCCGAGGCG
FD552148       --> ..ggatgtgaaAAAACACACATCATCTATCTTTAGTAATCCTCTGAAGCG
EW726906       --> ..................................................

               51     -    101
UN22258        --> AATCGATCATATCCATGGCTTTACCTTCTCTTTTGGTAGAAGATCGTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727839       <-- ..................................................
EX752871       <-- ..................................................
EY935802       <-- ..................................................
EX775953       <-- ..................................................
FD555389       <-- ..................................................
EV573618       <-- ..................................................
EW730424       <-- ..................................................
FD552964       <-- ..................................................
FD553813       <-- ..................................................
FD553122       <-- ..................................................
EY911191       <-- ..................................................
FD557780       --> AATCGATCATATCCATGGCTTTACCTTCTCTTTTGGTAGAAGATCGTCAA
EW723033       --> AATCGATCATATCCATGGCTTTACCTTCTCTTTTGGTAGAAGATCGTCAA
EX749089       --> AATCGATCATATCCATGGCTTTACCTTCTCTTTTGGTAGAAGATCGTCAA
EX771877       --> AATCGATCATATCCATGGCTTTACCTTCTCTTTTGGTAGAGGATCGTCAA
EY939960       --> AATCGATCATATCCATGGCTTTACCTTCTCTTTTGGTAGAAGATCGTCAA
FD556901       --> AATCGATCATATCCATGGCTTTACCTTCTCTTTTGGTAGAAGATCGTCAA
FD559736       --> AATCGATCATATCCATGGCTTTACCTTCTCTTTTGGTAGAAGATCGTCAA
FD556713       --> AATCGATCATATCCATGGCTTTACCTTCTCTTTTGGTAGAAGATCGTCAA
EY915323       --> AATCGATCATATCCATGGCTTTACCTTCTCTTTTGGTAGAAGATCGTCAA
EY941045       --> AATCGATCATATCCATGGCTTTACCTTCTCTTTTGGTAGAAGATCGTCAA
FD552148       --> ---CGATCATATCCATGGCTTTACCTCCTCTTTTGGTAGAAGATCGTCAA
EW726906       --> ..................................................

               101    -    151
UN22258        --> GTTCCGCTTGATGCTACCTCCGATCTACCTGCTTTGTTCGACGGAACCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727839       <-- .................................TTGTTCGACGGAACCAC
EX752871       <-- ..................................................
EY935802       <-- ..................................................
EX775953       <-- ..................................................
FD555389       <-- ..................................................
EV573618       <-- ..................................................
EW730424       <-- ..................................................
FD552964       <-- ..................................................
FD553813       <-- ..................................................
FD553122       <-- ..................................................
EY911191       <-- ..................................................
FD557780       --> GTTCCGCTTGATGCTACCTCCGATCTACCTGCTTTGTTCGACGGAACCAC
EW723033       --> GTTCCGCTTGATGCTACCTCCGATCTACCTGCTTTGTTCGACGGAACCAC
EX749089       --> GTTCCGCTTGATGCTACCTCCGATCTACCTGCTTTGTTCGACGGAACCAC
EX771877       --> GTTCCGCTTGATGCTACCTCCGATCTACCTGCTTTGTTCGACGGAACCAC
EY939960       --> GTTCCACTTGATGCTACCTCCGATCTACCTGCTTTGTTCGACGGAACCAC
FD556901       --> GTTCCGCTTGATGCTACCTCCGATCTACCTGCTTTGTTCGACGGAACCAC
FD559736       --> GTTCCGCTTGATGCTACCTCCGATCTACCTGCTTTGTTCGACGGAACCAC
FD556713       --> GTTCCGCTTGATGCTACCTCCGATCTACCTGCTTTGTTCGACGGAACCAC
EY915323       --> GTTCCGCTTGATGCTACCTCCGATCTACCTGCTTTGTTCGACGGAACCAC
EY941045       --> GTTCCGCTTGATGCTACCTCCGATCTACCTGCTTTGTTCGACGGAACCAC
FD552148       --> GTTCCGCTTGATGCTACCTCCGATCTACCTGCTTTATTCGACGGAACCAC
EW726906       --> ..................................gGTTCGACGGAACCAC

               151    -    201
UN22258        --> GAGGTTGTACATAAGCTACACCTGCCCATTTGCACAACGTGTTTGGATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727839       <-- GAGGTTGTACATAAGCTACACCTGCCCATTTGCACAACGTGTTTGGATTA
EX752871       <-- ..................................................
EY935802       <-- ..................................................
EX775953       <-- ..................................................
FD555389       <-- ..................................................
EV573618       <-- ..................................................
EW730424       <-- ..................................................
FD552964       <-- ..................................................
FD553813       <-- ..................................................
FD553122       <-- ..................................................
EY911191       <-- ..................................................
FD557780       --> GAGGTTGTACATAAGCTACACCTGCCCATTTGCACAACGTGTTTGGATTA
EW723033       --> GAGGTTGTACATAAGCTACACCTGCCCATTTGCACAACGTGTTTGGATTA
EX749089       --> GAGGTTGTACATAAGCTACACCTGCCCATTTGCACAACGTGTTTGGATTA
EX771877       --> GAGGTTGTACATAAGCTACACCTGCCCATTTGCACAACGTGTTTGGATTA
EY939960       --> GAGGTTGTACATAAGCTACACCTGCCCATTTGCACAACGTGTTTGGATTA
FD556901       --> GAGGTTGTACATAAGCTACACCTGCCCATTTGCACAACGTGTTTGGATTA
FD559736       --> GAGGTTGTACATAAGCTACACCTGCCCATTTGCACAACGTGTTTGGATTA
FD556713       --> GAGGTTGTACATAAGCTACACCTGCCCATTTGCACAACGTGTTTGGATTA
EY915323       --> GAGGTTGTACATAAGCTACACCTGCCCATTTGCACAACGTGTTTGGATTA
EY941045       --> GAGGTTGTACATAAGCTACACCTGCCCATTTGCACAACGTGTTTGGATTA
FD552148       --> GAGGTTGTACATAAGCTATACCTGCCCATTTGCACAACGTGTTTGGATTA
EW726906       --> GAGGTTGTACATAAGCTACACCTGCCCATTTGCACAACGTGTTTGGATTA

               201    -    251
UN22258        --> CCAGAAACCTCAAGGGTCTGCAAGAGAAGATCAAATTGGTTCCTATAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727839       <-- CCAGAAACCTCAAGGGTCTGCAAGAGAAGATCAAATTGGTTCCTATAGAC
EX752871       <-- ..................................................
EY935802       <-- ..................................................
EX775953       <-- ..................................................
FD555389       <-- ..................................................
EV573618       <-- ..................................................
EW730424       <-- ..................................................
FD552964       <-- ..................................................
FD553813       <-- ..................................................
FD553122       <-- ..................................................
EY911191       <-- ..................................................
FD557780       --> CCA-AAACCTCAAGGGTCTGCAAGAGAAGATCAAATTGGTTCCTATAGAC
EW723033       --> CCAGAAACCTCAAGGGTCTGCAAGAGAAGATCAAATTGGTTCCTATAGAC
EX749089       --> CCAGAAACCTCAAGGGTCTGCAAGAGAAGATCAAATTGGTTCCTATAGAC
EX771877       --> CCAGAAACCTCAAGGGTCTGCAAGAGAAGATCAAATTGGTTCCTATAGAC
EY939960       --> CCAGAAACCTCAAGGGTCTGCAAGAGAAGATCAAATTGGTTCCTATAGAC
FD556901       --> CCAGAAACCTCAAGGGTCTGCAAGAGAAGATCAAATTGGTTCCTATAGAC
FD559736       --> CCAGAAACCTCAAGGGTCTGCAAGAGAAGATCAAATTGGTTCCTATAGAC
FD556713       --> CCAGAAACCTCAAGGGTCTGCAAGAGAAGATCAAATTGGTTCCTATAGAC
EY915323       --> CCAGAAACCTCAAGGGTCTGCAAGAGAAGATCAAATTGGTTCCTATAGAC
EY941045       --> CCAGAAACCTCAAGGGTCTGCAAGAGAAGATCAAATTGGTTCCTATAGAC
FD552148       --> CCAGAAACCTCAAGGGTCTGCAAGAGACGATCAAATTGGTTCCTATAGAC
EW726906       --> CCAGAAACCTCGAGGGTCTGCAAGAGAAGATCAAATTGGTTCCTATAGAC

               251    -    301
UN22258        --> CTTCCTAATAGACCAGCGTGGTTCAAGGAGAAAGTGAACCCTGCAAACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727839       <-- CTTCCTAATAGACCAGCTTGGTTCAAGGAGAAAGTAAACCCTGCAAACAA  Raphanus sativus cv Early Scarlet Globe
EX752871       <-- ..TCCTAATAGACCAGCGTGGTTCAAGGAGAAAGTGAACCCTGCAAACAA  Raphanus raphanistrum subsp. maritimus
EY935802       <-- ...CCTAATAGACCAGCTTGGTTCAAGGAGAAAGTAAACCCTGCAAACAA  Raphanus sativus cv Early Scarlet Globe
EX775953       <-- ........TAGACCAGCGTGGTTCAAGGAGAAAGTGAACCCTGCAAACAA  Raphanus raphanistrum subsp. landra
FD555389       <-- ........TAGACCAGCGTGGTTCAAGGAGAAAGTGAACCCTGCAAACAA  Raphanus raphanistrum subsp. landra
EV573618       <-- .........AGACCAGCGTGGTTCAAGGAGAAAGTGAACCCTGCAAACAA  Raphanus raphanistrum subsp. landra
EW730424       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD552964       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD553813       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD553122       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY911191       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557780       --> CTTCCTAATAGACCAGCGTGGTTCAAGGAGAAAGTGAACCCTGCAAACAA  Raphanus raphanistrum subsp. landra
EW723033       --> CTTCCTAATAGACCAGCTTGGTTCAAGGAGAAAGTAAACCCTGCAAACAA  Raphanus sativus cv Early Scarlet Globe
EX749089       --> CTTCCTAATAGACCAGCGTGGTTCAAGGAGAAAGTGAACCCTGCAAACAA  Raphanus raphanistrum subsp. maritimus
EX771877       --> CTTCCTAATAGACCAGCGTGGTTCAAGGAGAAAGTGAACCCTGCAAACAA  Raphanus raphanistrum subsp. landra
EY939960       --> CTTCCTAATAGACCAGCTTGGTTCAAGGAGAAAGTAAACCCTGCAAACAA  Raphanus sativus cv Early Scarlet Globe
FD556901       --> CTTCCTAATAGACCAGCGTGGTTCAAGGAGAAAGTGAACCCTGCAAACAA  Raphanus raphanistrum subsp. landra
FD559736       --> CTTCCTAATAGACCAGCGTGGTTCAAGGAGAAAGTGAACCCTGCAAACAA  Raphanus raphanistrum subsp. landra
FD556713       --> CTTCCTAATAGACCAGCGTGGTTCAAGGAGAAAGTGAACCCTGCAAACAA  Raphanus raphanistrum subsp. landra
EY915323       --> CTTCCTAATAGACCAGCGTGGTTCAAGGAGAAAGTGAACCCTGCAAACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY941045       --> CTTCCTAATAGACCGGCTTGGTTCAAGGAGAAAGTAAACCCTGCAAACAA  Raphanus sativus cv Early Scarlet Globe
FD552148       --> CTTCCTAATAGACCAGCTTGGTTCAAGGAGAAAGTAAACCCTGCAAACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW726906       --> CTTCCTAATAGACCAGCTTGGTTCAAGGAGAAAGTAAACCCTGCAAACAA  Raphanus sativus cv Early Scarlet Globe

               301    -    351
UN22258        --> GGTGCCTGCTCTTGAACACAATGGCAAAATCATGGGGGAGAGTCTAGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727839       <-- GGTGCCTGCTCTTGAACACAATGGCAATATCATGGGGGAGAGTCTAGATT  Raphanus sativus cv Early Scarlet Globe
EX752871       <-- GGTGCCTGCTCTTGAACACAATGGCAAAATCATGGGGGAGAGTCTAGATT  Raphanus raphanistrum subsp. maritimus
EY935802       <-- GGTGCCTGCTCTTGAACACAATGGCAATATCATGGGGGAGAGTCTAGATT  Raphanus sativus cv Early Scarlet Globe
EX775953       <-- GGTGCCTGCTCTTGAATACAATGGCAAAATCATGGGGGAGAGTCTAGATT  Raphanus raphanistrum subsp. landra
FD555389       <-- GGTGCCTGCTCTTGAACACAATGGCAAAATCATGGGGGAGAGTCTAGATT  Raphanus raphanistrum subsp. landra
EV573618       <-- GGTGCCTGCTCTTGAACACAATGGCAAAATCATGGGGGAGAGTCTAGATT  Raphanus raphanistrum subsp. landra
EW730424       <-- ..gGCCTGCTCTTGAACACAATGGCAATATCATGGGGGAGAGTCTAGATT  Raphanus sativus cv Early Scarlet Globe
FD552964       <-- ...............................................ATT  Raphanus raphanistrum subsp. landra
FD553813       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD553122       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY911191       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557780       --> GGTGCCTGCTCTTGAACACAATGGCAAAATCATGGGGGAGAGTCTAGATT  Raphanus raphanistrum subsp. landra
EW723033       --> GGTGCCTGCTCTTGAACACAATGGCAATATCATGGGGGAGAGTCTAGATT  Raphanus sativus cv Early Scarlet Globe
EX749089       --> GGTGCCTGCTCTTGAACACAATGGCAAAATCATGGGGGAGAGTCTAGATT  Raphanus raphanistrum subsp. maritimus
EX771877       --> GGTGCCTGCTCTTGAATACAATGGCAAAATCATGGGGGAGAGTCTAGATT  Raphanus raphanistrum subsp. landra
EY939960       --> GGTGCCTGCTCTTGAACACAATGGCAATATCATGGGGGAGAGTCTAGATT  Raphanus sativus cv Early Scarlet Globe
FD556901       --> GGTGCCTGCTCTTGAACACAATGGCAAAATCATGGGGGAGAGTCTAGATT  Raphanus raphanistrum subsp. landra
FD559736       --> GGTGCCTGCTCTTGAACACAATGGCAAAATCATGGGGGAGAGTCTAGATT  Raphanus raphanistrum subsp. landra
FD556713       --> GGTGCCTGCTCTTGAACACAATGGCAAAATCATGGGGGAGAGTCTAGATT  Raphanus raphanistrum subsp. landra
EY915323       --> GGTGCCTGCTCTTGAACACAATGGCAAAATCATGGGGGAGAGTCTAGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY941045       --> GGTGCCTGCTCTTGAACACAATGGCAATATCATGGGGGAGAGTCTAGATT  Raphanus sativus cv Early Scarlet Globe
FD552148       --> GGTGCCTGCTCTTGAACACAATGGCAAAATCATGGGGGAGAGTCTAGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW726906       --> GGTGCCTGCTCTTGAACACAATGGCAATATCATGGGGGAGAGTCTAGATT  Raphanus sativus cv Early Scarlet Globe

               351    -    401
UN22258        --> TAATCAAATATGTGGATAGCAATTTCGAGGGACATTCACTTTACCCCCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727839       <-- TAATCAAATATGTGGATAGCAATTTCGAGGGACATTCACTTTACCCCCTG
EX752871       <-- TAATCAAATATGTGGATAGCAATTTCGAGGGACATTCACTTTACCCCCTG
EY935802       <-- TAATCAAATATGTGGATAGCAATTTCGAGGGGCATTCACTTTACCCCCTG
EX775953       <-- TAATCAAATATGTGGATAGCAATTTCGAGGGACATTCACTTTACCCCCTG
FD555389       <-- TAATCAAATATGTGGATAGCAATTTCGAGGGACATTCACTTTACCCCCTG
EV573618       <-- TAATCAAATATGTGGATAGCAATTTCGAGGGACATTCACTTTACCCCCTG
EW730424       <-- TAATCAAATATGTGGATAGCAATTTCGAGGGACATTCACTTTACCCCCTG
FD552964       <-- TAATCAAATATGTGGATAGCAATTTCGAGGGACATTCACTTTACCCCCTG
FD553813       <-- ...TCAAATATGTGGATAGCAATTTCGAGGGACATTCACTTTACCCCCTG
FD553122       <-- ..................................................
EY911191       <-- ..................................................
FD557780       --> TAATCAAATATGTGGATAGCAATTTCGAGGGACATTCACTTTACCCCCTG
EW723033       --> TAATCAAATATGTGGATAGCAATTTCGAGGGACATTCACTTTACCCCCTG
EX749089       --> TAATCAAATATGTGGATAGCAATTTCGAGGGACATTCACTTTACCCCCTG
EX771877       --> TAATCAAATATGTGGATAGCAATTTCGAGGGACATTCACTTTACCCCCTG
EY939960       --> TAATCAAATATGTGGATAGCAATTTCGAGGGGCATTCACTTTACCCCCTG
FD556901       --> TAATCAAATATGTGGATAGCAATTTCGAGGGACATTCACTTTACCCCCTG
FD559736       --> TAATCAAATATGTGGATAGCAATTTCGAGGGACATTCACTTTACCCCCTG
FD556713       --> TAATCAAATATGTGGATAGCAATTTCGAGGGACATTCACTTTACCCCCTG
EY915323       --> TAATCAAATATGTGGATAGCAATTTCGAGGGACATTCACTTTACCCCCTG
EY941045       --> TAATCAAATATGTGGATAGCAATTTCGAGGGACATTCACTTTACCCCCTG
FD552148       --> TAATCAAATATGTGGATAGCAATTTCGAGGGACATTCACTTTACCCCCTG
EW726906       --> TAATCAAATATGTGGATAGCAATTTCGAGGGACATTCACTTTACCCCCTG

               401    -    451
UN22258        --> GATCCTGAAAAGAGAGACTTTGGTGAAGACATGTTGAAATATGTTGATAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727839       <-- GATCCTGAAAAGAGAGACTTTGGTGAAGACATGTTGAAATATGTTGATAC
EX752871       <-- GATCCTGAAAAGAGAGACTTTGGTGAAGACATGTTGAAATATGTTGATAC
EY935802       <-- GATCCTGAAAAGAGAGACTTTGGTGAAGACATGTTGAAATATGTTGATAC
EX775953       <-- GATCCTGAAAAGAGAGACTTTGGTGAAGACATGTTGAAATATGTTGATAC
FD555389       <-- GATCCTGAAAAGAGAGACTTTGGTGAAGACATGTTGAAATATGTTGATAC
EV573618       <-- GATCCTGAAAAGAGAGACTTTGGTGAAGACATGTTGAAATATGTTGATAC
EW730424       <-- GATCCTGAAAAGAGAGACTTTGGTGAAGACATGTTGAAATATGTTGATAC
FD552964       <-- GATCCTGAAAAGAGAGACTTTGGTGAAGACATGTTGAAATATGTTGATAC
FD553813       <-- GATCCTGAAAAGAGAGACTTTGGTGAAGACATGTTGAAATATGTTGATAC
FD553122       <-- ....CTGAAAAGAGAGACTTTGGTGAAGACATGTTGAAATATGTTGATAC
EY911191       <-- ........aagGAGAGACTTTGGTGAAGACATGTTGAAATATGTTGATAC
FD557780       --> GATCCTGAAAAGAGAGACTTTGGTGAAGACATGTTGAAATATGTTGATAC
EW723033       --> GATCCTGAAAAGAGAGACTTTGGTGAAGACATGTTGAAATATGTTGATAC
EX749089       --> GATCCTGAAAAGAGAGACTTTGGTGAAGACATGTTGAAATATGTTGATAC
EX771877       --> GATCCTGAAAAGAGAGACTTTGGTGAAGACATGTTGAAATATGTTGATAC
EY939960       --> GATCCTGAAAAGAGAGACTTTGGTGAAGACATGTTGAAATATGTTGATAC
FD556901       --> GATCCTGAAAAGAGAGACTTTGGTGAAGACATGTTGAAATATGTTGATAC
FD559736       --> GATCCTGAAAAGAGAGACTTTGGTGAAGACATGTTGAAATATGTTGATAC
FD556713       --> GATCCTGAAAAGAGAGACTTTGGTGAAGACATGTTGAAATATGTTGATAC
EY915323       --> GATCCTGAAAGGAGAGACTTTGGTGAAGACATGTTGAAATATGTTGATAC
EY941045       --> GATCCTGAAAAGAGAGACTTTGGTGAAGACATGTTGAAATATGTTGATAC
FD552148       --> GATCCTGAAAAGAGAGACTTTGGTGAAGACATGCTGAAATATGTTGATAC
EW726906       --> GATCCTGAAAAGAGAGACTTTGGTGAAGACATGTTGAAATATGTTGATAC

               451    -    501
UN22258        --> AACATTCATTAAAGTTGTGTTTGACTCTTTCAAAGGTGATCCGGCTAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727839       <-- AACATTCATTAAAGTTGTGTTTGACTCTTTCAAAGGTGATCCGGCTAAAG
EX752871       <-- AACATTCATTAAAGTTGTGTTTGACTCTTTCAAAGGTGATCCGGCTAAAG
EY935802       <-- AACATTCATTAAAGTTGTGTTTGACTCTTTCAAAGGTGATCCGGCTAAAG
EX775953       <-- AACATTCATTAAAGTTGTGTTTGACTCTTTCAAAGGTGATCCGGCTAAAG
FD555389       <-- AACATTCATTAAAGTTGTGTTTGACTCTTTCAAAGGTGATCCGGCTAAAG
EV573618       <-- CACATTCATTAAAGTTGTGTTTGACTCTTTCAAAGGTGATCCGGCTAAAG
EW730424       <-- AACATTCATTAAAGTTGTGTTTGACTCTTTCAAAGGTGATCCGGCTAAAG
FD552964       <-- AACATTCATTAAAGTTGTGTTTGACTCTTTCAAAGGTGATCCGGCTAAAG
FD553813       <-- AACATTCATTAAAGTTGTGTTTGACTCTTTCAAAGGTGATCCGGCTAAAG
FD553122       <-- AACATTCATTAAAGTTGTGTTTGACTCTTTCAAAGGTGATCCGGCTAAAG
EY911191       <-- AACATTCATTAAAGTTGTGTTTGACTCTTTCAAAGGTGATCCGGCTAAAG
FD557780       --> AACATTCATTAAAGTTGTGTTTGACTCTTTCAAAGGTGATCCGGCTAAAG
EW723033       --> AACATTCATTAAAGTTGTGTTTGACTCTTTCAAAGGTGATCCGGCTAAAG
EX749089       --> AACATTCATTAAAGTTGTGTTTGACTCTTTCAAAGGTGATCCGGCTAAAG
EX771877       --> AACATTCATTAAAGTTGTGTTTGACTCTTTCAAAGGTGATCCGGCTAAAG
EY939960       --> AACATTCATTAAAGTTGTGTTTGACTCTTTCAAAGGTGATCCGGCTAAAG
FD556901       --> AACATTCATTAAAGTTGTGTTTGACTCTTTCAAAGGTGATCCGGCTAAAG
FD559736       --> AACATTCATTAAAGTTGTGTTTGACTCTTTCAAAGGTGATCCGGCTAAAG
FD556713       --> AACATTCATTAAAGTTGTGTTTGACTCTTTCAAAGGTGATCCGGCTAAAG
EY915323       --> AACATTCATTAAAGTTGTGTTTGACTCTTTCAAAGGTGATCCGGCTAAAG
EY941045       --> AACATTCATTAAAGTTGTGTTTGACTCTTTCAAAGGTGATCCGGCTAAAG
FD552148       --> AACATTCATTAAAGTTGTGTTTGACTCTTTCAAAGGTGATCCGGCTAAAG
EW726906       --> AACATTCATTAAAGTTGTGTTTGACTCTTTCAAAGGTGATCCGGCTAAAG

               501    -    551
UN22258        --> ATACGGCATCTGTCTTCGATCACTTGGAAAATGCTTTACAAAAGTTTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727839       <-- ATACGGCATCTGTCTTCGATCACTTGGAAAATGCATTACAAAAGTTTGAA  Raphanus sativus cv Early Scarlet Globe
EX752871       <-- ATACGGCATCTGTCTTCGATCACTTGGAAAATGCTTTACAAAAGTTTGAG  Raphanus raphanistrum subsp. maritimus
EY935802       <-- ATACGGCATCTGTCTTCGATCACTTGGAAAATGCATTACAAAAGTTTGAA  Raphanus sativus cv Early Scarlet Globe
EX775953       <-- ATACGGCATCTGTCTTCGATCACTTGGAAAATGCTTTACAAAAGTTTGAG  Raphanus raphanistrum subsp. landra
FD555389       <-- ATACGGCATCTGTCTTCGATCACTTGGAAAATGCTTTACAAAAGTTTGAG  Raphanus raphanistrum subsp. landra
EV573618       <-- ATACGGCATCTGTCTTCGATCACTTGGAAAATGCTTTACAAAAGTTTGAG  Raphanus raphanistrum subsp. landra
EW730424       <-- ATACGGCATCTGTCTTCGATCACTTGGAAAATGCATTACAAAAGTTTGAA  Raphanus sativus cv Early Scarlet Globe
FD552964       <-- ATACGGCATCTGTCTTCGATCACTTGGAAAATGCTTTACAAAAGTTTGAG  Raphanus raphanistrum subsp. landra
FD553813       <-- ATACGGCATCTGTCTTCGATCACTTGGAAAATGCTTTACAAAAGTTTGAG  Raphanus raphanistrum subsp. landra
FD553122       <-- ATACGGCATCTGTCTTCGATCACTTGGAAAATGCTTTACAAAAGTTTGAG  Raphanus raphanistrum subsp. landra
EY911191       <-- ATACGGCATCTGTCTTCGATCACTTGGAAAATGCTTTACAAAAGTTTGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557780       --> ATACGGCATCTGTCTTCGATCACTTGGAAAATGCTTTACAAAAGTTTGAG  Raphanus raphanistrum subsp. landra
EW723033       --> ATACGGCATCTGTCTTCGATCACTTGGAAAATGCATTACAAAAGTTTGAA  Raphanus sativus cv Early Scarlet Globe
EX749089       --> ATACGGCATCTGTCTTCGATCACTTGGAAAATGCTTTACAAAAGTTTGAG  Raphanus raphanistrum subsp. maritimus
EX771877       --> ATACGGCATCTGTCTTCGATCACTTGGAAAATGCTTTACAAAAGTTTGAG  Raphanus raphanistrum subsp. landra
EY939960       --> ATACGGCATCTGTCTTCGATCACTTGGAAAATGCATTACAAAAGTTTGAA  Raphanus sativus cv Early Scarlet Globe
FD556901       --> ATACGGCATCTGTCTTCGATCACTTGGAAAATGCTTTACAAAAGTTTGAG  Raphanus raphanistrum subsp. landra
FD559736       --> ATACGGCATCTGTCTTCGATCACTTGGAAAATGCTTTACAAAAGTTTGAG  Raphanus raphanistrum subsp. landra
FD556713       --> ATACGGCATCTGTCTTCGATCACTTGGAAAATGCTTTACAAAAGTTTGAG  Raphanus raphanistrum subsp. landra
EY915323       --> ATACGGCATCTGTCTTCGATCACTTGGAAAATGCTTTACAAAAGTTTGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY941045       --> ATACGGCATCTGTCTTCGATCACTTGGAAAATGCATTACAAAAGTTTGAA  Raphanus sativus cv Early Scarlet Globe
FD552148       --> ATACGGCATCTGTCTTCGATCACTTGGAAAATGCTTTACAAAAGTTTGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW726906       --> ATACGGCATCTGTCTTCGATCACTTGGAAAATGCATTACAAAAGTTTGAA  Raphanus sativus cv Early Scarlet Globe

               551    -    601
UN22258        --> GATGGTCCATTCTTCCTCGGCGACCTTAGCTTGG-TTGATGTCGCATATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727839       <-- GATGGTCCATTCTTCCTCGGCGACCTTAGCTTGG-TTGATGTCGCATATA
EX752871       <-- GATGGTCCATTCTTCCTCGGCGACCTTAGCTTGG-TTGATGTCGCATATA
EY935802       <-- GATGGTCCATTCTTCTTCGGCGACCTTAGCTTGG-TTGATGTCGCATATA
EX775953       <-- GATGGTCCATTCTTCCTCGGCGACCTTAGCTTGG-TTGATGTCGCATATA
FD555389       <-- GATGGTCCATTCTTCCTCGGCGACCTTAGCTTGG-TTGATGTCGCATATA
EV573618       <-- GATGGTCAATTCTTCCTCGGCGACCTTAGCTTGG-TTGATGTCGCATATA
EW730424       <-- GATGGTCCATTCTTCCTCGGCGACCTTAGCTTGG-TTGATGTCGCATATA
FD552964       <-- GATGGTCCATTCTTCCTCGGCGACCTTAGCTTGG-TTGATGTCGCGTATA
FD553813       <-- GATGGTCCATTCTTCCTCGGCGACCTTAGCTTGG-TTGATGTCGCATATA
FD553122       <-- GATGGTCCATTCTTCCTCGGCGACCTTAGCTTGG-TTGATGTCGCATATA
EY911191       <-- GATGGTCCATTCTTCCTCGGCGACCTTAGCTTGG-TTGATGTCGCATATA
FD557780       --> GATGGTCCATTCTTCCTCGGCGACCTTAGCTTGG-TTGATGTCGCATATA
EW723033       --> GATGGTCCATTCTTCCTCGGCGACCTTAGCTTGG-TTGATGTCGCATATA
EX749089       --> GATGGTCCATTCTTCCTCGGCGACCTTAGCTTGG-TTGATGTCGCATATA
EX771877       --> GATGGTCCATTCTTCCTCGGCGACCTTAGCTTGG-TTGATGTCGCATATA
EY939960       --> GATGGTCCATTCTTCCTCGGCGACCTTAGCTTGG-TTGATGTCGCATATA
FD556901       --> GATGGTCCATTCTTCCTCGGCGACCTTAGCTTGG-TTGATGT........
FD559736       --> GATGGTCCATTCTTCCTCGGCGACCTTAGCTTGGGTTGATGTCGCATATA
FD556713       --> GATGGTCCATTCTTCCTCGGCGACCTTAGCTTGG-TTGATGTCGCGTATA
EY915323       --> GATGGTCCATTCTTCCTCGGCGACCTTAGCTTGG-TTGATGTCGCATATA
EY941045       --> GATGGTCCATTCTTCCTCGGCGACCTTAGCTTGG-TTGATGTCGCATATA
FD552148       --> GATGGTCCATTCTTCCTCGGCGACCTTAGCTTTG-TTGATGTCGCATATA
EW726906       --> GATGGTCCATTCTTCCTCGGCGACCTTAGCTTGG-TTGATGTCGCATATA

               601    -    651
UN22258        --> TTCCATTCGTCCAACGATTTCAAGTCTTCCTCGGCGAAGTTTTCAAGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727839       <-- TTCCATTCGTCCAACGATTTCAAGTCTTCCTCGGCGAAGTTTTCAAGTAC
EX752871       <-- TTCCATTCGTCCAACGATTTCAAGTCTTCCTCGGCGAAGTTTTCAAGTAC
EY935802       <-- TTCCATTCGTCCAACGATTTCAAGTCTTCCTCGGCGAAGTTTTCAAGTAC
EX775953       <-- TTCCATTCGTCCAACGATTTCAAGTCTTCCTCGGCGAAGTTTTCAAGTAC
FD555389       <-- TTCCGTTCGTCCAACGATTTCAAGTCTTCCTCGGCGAAGTTTTCAAGTAC
EV573618       <-- TCCCATTCGTCCAACGATTTCAAGTCTTCCTCGGCGAAGTTTTCAAGTAC
EW730424       <-- TTCCATTCGTCCAACGATTTCAAGTCTTCCTCGGCGAAGTTTTCAAGTAC
FD552964       <-- TTCCATTCGTCCAACGATTTCAAGTCTTCCTCGGCGAAGTTTTCAAGTAC
FD553813       <-- TTCCATTCGTCCAACGATTTCAAGTCTTCCTCGGCGAAGTTTTCAAGTAC
FD553122       <-- TTCCATTCGTCCAACGATTTCAAGTCTTCCTCGGCGAAGTTTTCAAGTAC
EY911191       <-- TTCCATTCGTCCAACGATTTCAAGTCTTCCTCGGCGAAGTTTTCAAGTAC
FD557780       --> TTCCATTCGTCCAACGATTTCAAGTCTTCCTCGGCGAAGTTTTCAAGTAC
EW723033       --> TTCCATTCGTCCAACGATTTCAAGTCTTCCTCGGCGAAGTTTTCAAGTAC
EX749089       --> TTCCATTCGTCCAACGATTTCAAGTCTTCCTCGGCGAAGTTTTCAAGTAC
EX771877       --> TTCCATTCGTCCAACGATTTCAAGTCTTCCTCGGCGAAGTTTTCAAGTAC
EY939960       --> TTCCATTCGTCCAACGATTTCAAGTCTTCCTCGGCGAAGTTTTCAAGTAC
FD556901       --> ..................................................
FD559736       --> TTCCGTTCGTCCAACGATTTCAAGTCTTCCTCGGCGAAGTTTTCAAGTAC
FD556713       --> TTCCATTCGTCCAACGATTTCAAGTCTTCCTCGGCGAAGTTTTCAAGTAC
EY915323       --> TTCCATTCGTCCAACGATTTCAAGTCTTCCTCGGCGAAGTTTTCAAGTAC
EY941045       --> TTCCATTCGTCCA--GATTTCAAGTCTTCCTCGGCGAAGTTTTCAAGTAC
FD552148       --> TCCCATTCGTCCAACGATTTCAAGTCTTCCTCGGCGAAGTTTTCAAGTAC
EW726906       --> TTCCATTCGTCCAACGATTTCAAGTCTTCCTCGGCGAAGTTTTCAAGTAC

               651    -    701
UN22258        --> GATATTGCTGCTGGACGTCCAAAACTAGCTGCTTGGATTGAGGAAATGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727839       <-- GATATTACTGCTGGACGTCCAAAACTAGCTGCTTGGATTAAGGAAATGGA  Raphanus sativus cv Early Scarlet Globe
EX752871       <-- GATATTGCTGCTGGACGTCCAAAACTAGCTGCTTGGATTGAGGAAATGGA  Raphanus raphanistrum subsp. maritimus
EY935802       <-- GATATTACTGCTGGACGTCCAAAACTAGCTGCTTGGATTAAGGAAATGGA  Raphanus sativus cv Early Scarlet Globe
EX775953       <-- GATATTGCTGCTGGACGTCCAAAACTAGCTGCTTGGATTGAGGAAATGGA  Raphanus raphanistrum subsp. landra
FD555389       <-- GATATTGCTGCTGGACGTCCAAAACTAGCTGCTTGGATTGAGGAAATGGA  Raphanus raphanistrum subsp. landra
EV573618       <-- GATATTACTGCTGGACGTCCAAAACTAGCTGCTTGGATTGAGGAAATGGA  Raphanus raphanistrum subsp. landra
EW730424       <-- GATATTACTGCTGGACGTCCAAAACTAGCTGCTTGGATTAAGGAAATGGA  Raphanus sativus cv Early Scarlet Globe
FD552964       <-- GATATTGCTGCTGGACGTCCAAAACTAGCTGCTTGGATTGAGGAAATGGA  Raphanus raphanistrum subsp. landra
FD553813       <-- GATATTGCTGCTGGACGTCCAAAACTAGCTGCTTGGATTGAGGAAATGGA  Raphanus raphanistrum subsp. landra
FD553122       <-- GATATTGCTGCTGGACGTCCAAAACTAGCTGCTTGGATTGAGGAAATGGA  Raphanus raphanistrum subsp. landra
EY911191       <-- GATATTGCTGCTGGACGTCCAAAACTAGCTGCTTGGATTGAGGAAATGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557780       --> GATATTGCTGCTGGACGTCCAAA...........................  Raphanus raphanistrum subsp. landra
EW723033       --> GATATTACTGCTGGACGTCCAAAACTAGCTGCTTGGATT-AAGAAATGGA  Raphanus sativus cv Early Scarlet Globe
EX749089       --> GATATTGCTGCTGGACGTCCAAA-CTAGCTGCTTGGATTGAGGAA-TGGA  Raphanus raphanistrum subsp. maritimus
EX771877       --> GATATTGCTGCTGGACGTCCAAAACTAGCTGCTTGGATTGAGGAA-TGGA  Raphanus raphanistrum subsp. landra
EY939960       --> GATATTACTGCTGGACGTCCAAA-CTAGCTGCTTGGATA-AGGAA-TGGA  Raphanus sativus cv Early Scarlet Globe
FD556901       --> ..................................................  Raphanus raphanistrum subsp. landra
FD559736       --> GATATTGCTGCTGGACGTCCAAAACTAGCTGCTTGGATTGAGGAA-TGGA  Raphanus raphanistrum subsp. landra
FD556713       --> GATATTGCTGCTGGACGTCCAAAACTAGCTGCTTGGATTGAGGAAATGGA  Raphanus raphanistrum subsp. landra
EY915323       --> GATATTGCTGCTGGACGTCCAAAACTAGCTGCTTGGATTGAGGAAATGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY941045       --> GATATTACTGCTGGACGTCCAAAACTAGCTGCTTGGATTAAGGAA-TGGA  Raphanus sativus cv Early Scarlet Globe
FD552148       --> GATATTACTGCTGGACGTCCAAA...........................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW726906       --> GATATTACTGCTGGACGTCCAAAACTAGCTGCTTGGATTAAGGAAATGGA  Raphanus sativus cv Early Scarlet Globe

               701    -    751
UN22258        --> TAAGATGGTTGCATATACGCAGACCAAAACCGACTCGGAATATGTCATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727839       <-- TGAGATGGTTGCATATACGCAGACCAAAACCGACTCGGAATATGTCATTA  Raphanus sativus cv Early Scarlet Globe
EX752871       <-- TAAGATGGTTGCATATACGCAGACCAAAACCGACTCGGAATATGTCATTA  Raphanus raphanistrum subsp. maritimus
EY935802       <-- TGAGATGGTTGCATATACGCAGACCAAAACCGACTCGGAATATGTCATTA  Raphanus sativus cv Early Scarlet Globe
EX775953       <-- TAAGATGGTTGCATATACGCAGACCAAAACCGACTCGGAATATGTCATTA  Raphanus raphanistrum subsp. landra
FD555389       <-- TAAGATGGTTGCATATACGCAGACCAAAACCGACTCGGAATATGTCATTA  Raphanus raphanistrum subsp. landra
EV573618       <-- TAAGATGGTTGCATATACGCAGACCAAAACCGACTCGGAATATGTCATTA  Raphanus raphanistrum subsp. landra
EW730424       <-- TGAGATGGTTGCGTATACGCAGACCAAAACCGACTCGGAATATGTCATTA  Raphanus sativus cv Early Scarlet Globe
FD552964       <-- TAAGATGGTTGCATATACGCAGACCAAAACCGACTCGGAATATGTCATTA  Raphanus raphanistrum subsp. landra
FD553813       <-- TAAGATGGTTGCATATACGCAGACCAAAACCGACTCGGAATATGTCATTA  Raphanus raphanistrum subsp. landra
FD553122       <-- TAAGATGGTTGCATATACGCAGACCAAAACCGACTCGGAATATGTCATTA  Raphanus raphanistrum subsp. landra
EY911191       <-- TAAGATGGTTGCATATACGCAGACCAAAACCGACTCGGAATATGTCATTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557780       --> ..................................................  Raphanus raphanistrum subsp. landra
EW723033       --> TGAGATGGTTGCATATACGCAGACCAAAACCGACTCGGAATATGTCATTA  Raphanus sativus cv Early Scarlet Globe
EX749089       --> TAAGATGGTTGCATATACGCAGACCAAA-CCGACTCGGA-TATGTCATTA  Raphanus raphanistrum subsp. maritimus
EX771877       --> TAAGATGGTTGCATATACGCAGACCAAAACCGACTCGGAATATGTCATTA  Raphanus raphanistrum subsp. landra
EY939960       --> TGAGATGGTTGCATATACGCAGACCAAA-CCGACTCGGA-TATGTCATTA  Raphanus sativus cv Early Scarlet Globe
FD556901       --> ..................................................  Raphanus raphanistrum subsp. landra
FD559736       --> TAAGATGGTTGCATATACGCAGACCAAA-CCGACTCGGA-TATGTCATaa  Raphanus raphanistrum subsp. landra
FD556713       --> TAAGATGGTTGCATATACGCAGACCAAAACCGACTCGGAATATGTCATTA  Raphanus raphanistrum subsp. landra
EY915323       --> TAAGATGGTTGCATATACGCAGAC..........................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY941045       --> TGAGATGGTTGCATATACGCAGACCAAA-CCGACTCGGA-TATGTCATTA  Raphanus sativus cv Early Scarlet Globe
FD552148       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW726906       --> TGAGATGGTTGCATATACGCAGACCAAAACCGACTCGGAATATGTCATTA  Raphanus sativus cv Early Scarlet Globe

               751    -    801
UN22258        --> ATTATTTCAAGAAGTTCATGTAAAATTGTATACCGAGTCATCGCGCGGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727839       <-- GTTATTTCAAGAAGTTCATGTAAAATTGTATACCGAGTCATCGCGCGGCC  Raphanus sativus cv Early Scarlet Globe
EX752871       <-- ATTATTTCAAGAAGTTCATGTAAAATTGTATACCGAGTCATCGCGCGGCC  Raphanus raphanistrum subsp. maritimus
EY935802       <-- GTTATTTCAAGAAGTTCATGTAAAATTGTATATCGAGTCATCGCGCGGCC  Raphanus sativus cv Early Scarlet Globe
EX775953       <-- ATTATTTCAAGAAGTTCATGTAAAATTGTATACCGAGTCATCGCGCGGCC  Raphanus raphanistrum subsp. landra
FD555389       <-- ATTATTTCAAGAAGTTCATGTAAAATTGTATACCGAGTCATCGCGCGGCC  Raphanus raphanistrum subsp. landra
EV573618       <-- ATTATTTCAAGAAGTTCATGTAAAATTGTATACCGAGTCATCGTGCGGCC  Raphanus raphanistrum subsp. landra
EW730424       <-- GTTATTTCAAGAGGTTCATGTAAAATTGTATACCGAGTCATCGCGCGGCC  Raphanus sativus cv Early Scarlet Globe
FD552964       <-- ATTATTTCAAGAAGTTCATGTAAAATTGTATACCGAGTCATCGCGCGGCC  Raphanus raphanistrum subsp. landra
FD553813       <-- ATTATTTCAAGAAGTTCATGTAAAATTGTATACCGAGTCATCGCGCGGCC  Raphanus raphanistrum subsp. landra
FD553122       <-- ATTATTTCAAGAAGTTCATGTAAAATTGTATACCGAGTCATCGCGCGGCC  Raphanus raphanistrum subsp. landra
EY911191       <-- ATTATTTCAAGAAGTTCATGTAAAATTGTATACCGAGTCATCGCGCGGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557780       --> ..................................................  Raphanus raphanistrum subsp. landra
EW723033       --> GTTATTTCAAGAAGTTCATGTAAAATTGTATACCGAGTCATCGCGCGGCC  Raphanus sativus cv Early Scarlet Globe
EX749089       --> t.................................................  Raphanus raphanistrum subsp. maritimus
EX771877       --> ATTATTTCA-GAAGTTCATGTAAA--TGTATACCGAGTCATCGCGCGGCC  Raphanus raphanistrum subsp. landra
EY939960       --> GTTATT-CA-GA-GT-CATGTAAA-TTGTATATCGAGTCATCGCGCGG..  Raphanus sativus cv Early Scarlet Globe
FD556901       --> ..................................................  Raphanus raphanistrum subsp. landra
FD559736       --> tattcaga..........................................  Raphanus raphanistrum subsp. landra
FD556713       --> AT-ATTTCA-GAAGT-CATGTAAA-TTGTATACCGAGTCATCGCGCGGCC  Raphanus raphanistrum subsp. landra
EY915323       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY941045       --> GTTATTTCA-G-AGTTCATGTAAA-TTGTATACCGAGTCATCGCGCGGCC  Raphanus sativus cv Early Scarlet Globe
FD552148       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW726906       --> GTTATTTCAAGAAGTTCATGTAAAATTGTATACCGAGTCATCGCGCGGCC  Raphanus sativus cv Early Scarlet Globe

               801    -    851
UN22258        --> ATGTTGGCTTATGAAGAAGATCGTGTGTGAACGTTACTATGTACGTGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727839       <-- ATGTTGGCTTATGAAGAAGATCGTGTGTGAACGTTACTGTGTAAGTGTGT  Raphanus sativus cv Early Scarlet Globe
EX752871       <-- ATGTTGGCTTATGAAGAAGATCGTGTGTGAACGTTACTATGTACGTGTGT  Raphanus raphanistrum subsp. maritimus
EY935802       <-- ATGTTGGCTTATGAAGAAGATCGTGTGTGAACGTTACTATGTAAGTGTGT  Raphanus sativus cv Early Scarlet Globe
EX775953       <-- ATGTTGGCTTATGAAGAAGATCGTGTGTGAACGTTACTATGTACGTGTGT  Raphanus raphanistrum subsp. landra
FD555389       <-- ATGTTGGCTTATGAAGAAGATCGTGTGTGAACGTTACTATGTACGTGTGT  Raphanus raphanistrum subsp. landra
EV573618       <-- ATGTTGGCTTATGAAGAAGATCGTGTGTGAACGTTACTATGTACGTGTGT  Raphanus raphanistrum subsp. landra
EW730424       <-- ATGTTGGCTTATGAAGAAGATCGTGTGTGAACGTTACTATGTAAGTGTGT  Raphanus sativus cv Early Scarlet Globe
FD552964       <-- ATGTTGGCTTATGAAGAAGATCGTGTGTGAACGTTACTATGTACGTGTGT  Raphanus raphanistrum subsp. landra
FD553813       <-- ATGTTGGCTTATGAAGAAGATCGTGTGTGAACGTTACTATGTACGTGTGT  Raphanus raphanistrum subsp. landra
FD553122       <-- ATGTTGGCTTATGAAGAAGATCGTGTGTGAACGTTACTATGTACGTGTGT  Raphanus raphanistrum subsp. landra
EY911191       <-- ATGTTGGCTTATGAAGAAGATCGTGTGTGAACGTTACTATGTACGTGTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557780       --> ..................................................  Raphanus raphanistrum subsp. landra
EW723033       --> ATGTTGGCTT........................................  Raphanus sativus cv Early Scarlet Globe
EX749089       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX771877       --> ATGTTGGCTTATGAAGAAGATCGTGTGTGAcgt.................  Raphanus raphanistrum subsp. landra
EY939960       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD556901       --> ..................................................  Raphanus raphanistrum subsp. landra
FD559736       --> ..................................................  Raphanus raphanistrum subsp. landra
FD556713       --> ATGTTGGCTTATGAAGAAGATCGTGTGTGA-CG-TACTATGTACGTGTGT  Raphanus raphanistrum subsp. landra
EY915323       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY941045       --> ATGTTGGCTTAT......................................  Raphanus sativus cv Early Scarlet Globe
FD552148       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW726906       --> ATGTTGGCTTATGAAGAAGATCGTGTGTGA-CG-TACTATGTAAGTGTGT  Raphanus sativus cv Early Scarlet Globe

               851    -    901
UN22258        --> GTGCTACAAGTGTCTGGATTTCAACCATTTCGCATCGTTCTTAATAAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727839       <-- GTGCTACAAGTGTCTGGATTTCAACCATTTCGCATCGTTCTTAATAAATG
EX752871       <-- GTGCTACAAGTGTCTGGATTTCAACCATTTCGCATCGTTCTTAATAAATG
EY935802       <-- GTGCTACAAGTGTCTGGATTTCAACCATTTCGCATCGTTCTTAATAAATG
EX775953       <-- GTGCTACAAGTGTCTGGATTTCAACCATTTCGCATCGTTCTTAATAAATG
FD555389       <-- GCGCTACAAGTGTCTGGATTTCAACCATTTCGCATCGTTCTTAATAAATG
EV573618       <-- GTGCTACAAGTGTCTGGATTTCAACCATTTCGCATCGTTCTTAATAAATG
EW730424       <-- GTGCTACAAGTGTCTGGATTTCAACCATTTCGCATCGTTCTTAATAAATG
FD552964       <-- GTGCTACAAGTGTCTGGATTTCAACCATTTCGCATCGTTCTTAATAAATG
FD553813       <-- GTGCTACAAGTGTCTGGATTTCAACCATTTCGCATCGTTCTTAATAAATG
FD553122       <-- GTGCTACAAGTGTCTGGATTTCAACCATTTCGCATCGTTCTTAATAAATG
EY911191       <-- GTGCTACAAGTGTCTGGATTTCAACCATTTCGCATCGTTCTTAATAAATG
FD557780       --> ..................................................
EW723033       --> ..................................................
EX749089       --> ..................................................
EX771877       --> ..................................................
EY939960       --> ..................................................
FD556901       --> ..................................................
FD559736       --> ..................................................
FD556713       --> GTGCTA............................................
EY915323       --> ..................................................
EY941045       --> ..................................................
FD552148       --> ..................................................
EW726906       --> GTGCTACAAGTGTCTGGATTTCA-CCATTTCGCATCGTTCTT........

               901    -    951
UN22258        --> TTATGTGGAGCATATCATTCAAAAAAA-TGTTATGTGGAACTTTTGTATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727839       <-- TTATGTGGAGCATATCATTCAAAAAAA-TGTTATGTGGAACTTTTGTATA
EX752871       <-- TTATGTGGAGCATATCATTCAAAAAA--TGTTATGTGGAACTTTTGTATA
EY935802       <-- TTATGTGGAGCATATCATTCAAAAAAAATGTTATGTGGAACTTTTGTATA
EX775953       <-- TTATGTGGAGCATATCATTCAAAAAAA-TGTTATGTGGAACTTTTGTATA
FD555389       <-- TTATGTGGAGCATATCATTCAAAAAAA-TGTTATGTGGAACTTTTGTATA
EV573618       <-- TTATGTGGAGCATATCATTCAAAAAA--TGTTATGTGGAACTTTTGTATA
EW730424       <-- TTATGTGGAGCATATCATTCAAAAAAA-TGTTATGTGGAACTTTTGTATA
FD552964       <-- TTATGTGGAGCATATCATTCAAAAAAA-TGTTATGTGGAACTTTTGTATA
FD553813       <-- TTATGTGGAGCATATCATTCAAAAAAA-TGTTATGTGGAACTTTTGTATA
FD553122       <-- TTATGTGGAGCATATCATTCAAAAAAA-TGTTATGTGGAACTTTTGTATA
EY911191       <-- TTATGTGGAGCATATCATTCAAAAAAA-TGTTATGTGGAACTTTTGTATA
FD557780       --> ..................................................
EW723033       --> ..................................................
EX749089       --> ..................................................
EX771877       --> ..................................................
EY939960       --> ..................................................
FD556901       --> ..................................................
FD559736       --> ..................................................
FD556713       --> ..................................................
EY915323       --> ..................................................
EY941045       --> ..................................................
FD552148       --> ..................................................
EW726906       --> ..................................................

               951    -   1001
UN22258        --> CAATGTGTGTATCAGTGTATGCAAGTCTCAATGTATAGACATTTTATTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727839       <-- CAATG--------TGTGTATGCAAGTCTCAATGTATAGACCTTTTATTTT
EX752871       <-- CAATGTGTGTATCAGTGTA...............................
EY935802       <-- CAATG--------TGTGTATGCAAGTCTCAATGTATAGACATTTTATTTT
EX775953       <-- CAATGTGTGTATCAGTGTATGCAAGTCTCAATGTATAGACATTTTATTTT
FD555389       <-- CAATGTGTGTATCAGTGTATGCAAGTCTCAATGTATAGACATTTTATTTT
EV573618       <-- CAATGTGTGTATCAGTGTATGTAAGTCTCAATGTATAGACATTTTATTTT
EW730424       <-- CAATG--------TGTGTATGCAAGTCTCAATGTATAGACATTTTATTTT
FD552964       <-- CAATGTGTGTATCAGTGTATGCAAGTCTCAATGTATAGACATTTTATTTT
FD553813       <-- CAATGTGTGTATCAGTGTATGCAAGTCTCAATGTATAGACATTTTATTTT
FD553122       <-- CAATGTGTGTATCAGTGTATGCAAGTCTCAATGTATAGACATTTTATTTT
EY911191       <-- CAATGTGTGTATCAGTGTATGCAAGTCTCAATGTATAGACATTTTATTTT
FD557780       --> ..................................................
EW723033       --> ..................................................
EX749089       --> ..................................................
EX771877       --> ..................................................
EY939960       --> ..................................................
FD556901       --> ..................................................
FD559736       --> ..................................................
FD556713       --> ..................................................
EY915323       --> ..................................................
EY941045       --> ..................................................
FD552148       --> ..................................................
EW726906       --> ..................................................

               1001   -   1051
UN22258        --> TAAAAATCCGAATTGGTTCCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~
EW727839       <-- TCAAAATCCGAATTGGTTCC...
EX752871       <-- .......................
EY935802       <-- Tc.....................
EX775953       <-- TAAAAATCCGAATTGGTTCC...
FD555389       <-- T......................
EV573618       <-- TCAAAATCCGAATTGGTTCC...
EW730424       <-- TCAAAAT................
FD552964       <-- TAAAAATCCGAATTGGTTCC...
FD553813       <-- TAAAAATCCGAATTGGTTCCAGC
FD553122       <-- c......................
EY911191       <-- TAAAAATCCGAATTGGTTCC...
FD557780       --> .......................
EW723033       --> .......................
EX749089       --> .......................
EX771877       --> .......................
EY939960       --> .......................
FD556901       --> .......................
FD559736       --> .......................
FD556713       --> .......................
EY915323       --> .......................
EY941045       --> .......................
FD552148       --> .......................
EW726906       --> .......................