Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN22334

               1      -     51
UN22334        --> CGCCAGTTGAAATCATTTATAAATAACCATTATCTTCCACTACATAAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965133       <-- ..................................................
EW713519       <-- ..................................................
EW713520       <-- ..................................................
EW717430       <-- ..................................................
EV528635       <-- ..................................................
FD557498       <-- ..................................................
EX750226       <-- ..................................................
EY925315       <-- ..................................................
EX756610       <-- ..................................................
FD949334       <-- ..................................................
FD572080       <-- ..................................................
FD944991       --> CGCCAGTTGAAATCATTTATAAATAACCATTATCTTCCACTACATAAATG
EV532571       --> ..................................................
EW721723       --> ..................................................
EW721426       --> ..................................................
FD553592       --> ..................................................
EW718369       --> ..................................................
EW718629       --> ..................................................

               51     -    101
UN22334        --> GATAGTGTACTGTTACTTGGCATTTATCAAAGTGAAAAATGATCTAATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965133       <-- ..................................................
EW713519       <-- ..................................................
EW713520       <-- ..................................................
EW717430       <-- ..................................................
EV528635       <-- ..................................................
FD557498       <-- ..................................................
EX750226       <-- ..................................................
EY925315       <-- ..................................................
EX756610       <-- ..................................................
FD949334       <-- ..................................................
FD572080       <-- ..................................................
FD944991       --> GATAGTGTACTGTTACTTGGCATTTATCAAAGTGAAAAATGATCTAATGT
EV532571       --> ...........ataaataacCATTTATCAAAGTGAAAAATGATCTAATGT
EW721723       --> ........................................GATCTAATGT
EW721426       --> ..............................................ATGT
FD553592       --> ................................................gc
EW718369       --> ..................................................
EW718629       --> ..................................................

               101    -    151
UN22334        --> CCCATACTTCGTATCATTATAAAAATTGAAAACATGAC-TTCG-AGGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965133       <-- ..................................................
EW713519       <-- ..................................................
EW713520       <-- ..................................................
EW717430       <-- ..................................................
EV528635       <-- ..................................................
FD557498       <-- ..................................................
EX750226       <-- ..................................................
EY925315       <-- ..................................................
EX756610       <-- ..................................................
FD949334       <-- ..................................................
FD572080       <-- ..................................................
FD944991       --> CCCATACTTCGTATCATTATAAAAATTGAAAACATGAC-TTCGGAGGCTG
EV532571       --> CCCAAACTTCCAATCATTATAAAAATTGAAAACATGACCTTGG-AGGCTG
EW721723       --> CCCATACTTCGTATCATTATAAAAATTGAAAACATGAC-TTCG-AGGCTG
EW721426       --> CCCATACTTCGTATCATTATAAAAATTGAAAACATGAC-TTCGGAGGCTG
FD553592       --> CCCATACTTCGTATCATTATAAAAATTGAAAACATGAC-TTCG-AGGCTG
EW718369       --> ..................................................
EW718629       --> ..................................................

               151    -    201
UN22334        --> ATACAAAAAA-AAAAACAACACTTCTAAGCTCAAATGAA--T-ATATCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965133       <-- .gaggctgatacAAAAAAACACT-CTAAGCTCAA-TGAA-GT-ATATCC-
EW713519       <-- ......................................ggtT-ATATCCC
EW713520       <-- .....................................gggtT-ATATCCC
EW717430       <-- ...........................aaaaacaatctagctcaatgagt
EV528635       <-- ..................................................
FD557498       <-- ..................................................
EX750226       <-- ..................................................
EY925315       <-- ..................................................
EX756610       <-- ..................................................
FD949334       <-- ..................................................
FD572080       <-- ..................................................
FD944991       --> ATACAAAAAA-AAAA-CAA---TTCTAAGCTCAAATGAG--TTATATCCC
EV532571       --> ATACAAAAAA-AA------CACTTCTAAGCTCAAATGAAGTT-ATATCCC
EW721723       --> ATACAAAAAATAAAAACAACACTTCTAAGCTCAAATGAA--T--TATCCC
EW721426       --> ATACAAAAAA-A----CAA---TTCTAAGCTCAAATGAG--TTATATCCC
FD553592       --> ATACAAAAAATAAAAACAACACTTCTAAGCTCAAATGAA--T--TATCCC
EW718369       --> .....................................gggtT-ATATCCC
EW718629       --> .....................................gggtT-ATATCCC

               201    -    251
UN22334        --> TACTTGGAAATTCTTATTGATTCGCTTCTGTTTTT-CTTTCTCCAACAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965133       <-- TACT-GGAAAT-CT-AT-GAT-CG-TTCTGTTTT--CTT-CTCCAACAAA
EW713519       <-- TACTTGGAAATTCTTATTGATTCGCTTCTGTTTT--C-TTCTCCAACAAA
EW713520       <-- TACTTGGAAATTCTTATTGATTCGCTTCTGTTTTT-CTTTCTCCAACAAA
EW717430       <-- atatcctactgaaatctatgaTCGCTTCTGTTTT--CTT-CTCCAACAAA
EV528635       <-- .......................gtTTCTGTTTT--CTTTCTCCAACAAA
FD557498       <-- ..............................................acAA
EX750226       <-- ..................................................
EY925315       <-- ..................................................
EX756610       <-- ..................................................
FD949334       <-- ..................................................
FD572080       <-- ..................................................
FD944991       --> TACTTGGAAATTCTTATTGATTCGCTTCTGTTTTT-CTTTCTCCAACAAA
EV532571       --> TACTTGGAAATTCTTATTGATTCGTTTCTGTTTTT-CTTTCTCCAACAAA
EW721723       --> TACTTGGAAATTCTTATTGAATCGTTTTTGTTTTTTCTTACTCCAACAAA
EW721426       --> TACTTGGAAATTCTTATTGATTCGCTTCTGTTTTT-CTTTCTCCAACAAA
FD553592       --> TACTTGGAAATTCTTATTGAATCGTTTTTGTTTTTTCTTACTCCAACAAA
EW718369       --> TACTTGGAAATTCTTATTGATTCGCTTCTGTTTTT-CTTTCTCCAACAAA
EW718629       --> TACTTGGAAATTCTTATTGATTCGCTTCTGTTTTT-CTTTCTCCAACAAA

               251    -    301
UN22334        --> TCCTCTCAA-GCCGACCCAATTCATTCTCCAAAAACATTAAACTTACTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965133       <-- TCCTCTCAAAGCTGACCCAATTCATTCTC-AAAAACATTAAACTTACTTT  Raphanus raphanistrum subsp. maritimus
EW713519       <-- TCCTCTCAA-GCCGACCCAATTCATTC-CCAAAAACATTAAACTTACTTT  Raphanus sativus var. oleiformis
EW713520       <-- TCCTCTCAA-GCCGACCCAATTCATTC-CCAAAAACATTAAACTTACTTT  Raphanus sativus var. oleiformis
EW717430       <-- TCCCCTCAA-GCCGACCCAATTCAT-CT--CAAAACATTAAACTTACTTT  Raphanus sativus var. oleiformis
EV528635       <-- TCCTCTCAAAGCTGACGCAATTCAT-CT-CAAAAACATTAAACTTACTTT  Raphanus raphanistrum subsp. maritimus
FD557498       <-- TCCTCTCAA-GCTGACCCAATTCATTCTCAAAAAACATTAAACTTACTTT  Raphanus raphanistrum subsp. landra
EX750226       <-- ........................catctCAAAAACATTAAACTTACTTT  Raphanus raphanistrum subsp. maritimus
EY925315       <-- ...............................AAAACATTAAACTTACTTT  Raphanus raphanistrum subsp. landra
EX756610       <-- ..................................ACATTAAGCTTACTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD949334       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD572080       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD944991       --> TCCTCTCAA-GCCGACCCAATTCATTCTC-AAAAACATTAAACTTACTTT  Raphanus sativus cv Early Scarlet Globe
EV532571       --> TCCTCTCAAAGCTGACCCAATTCATTCTC-AAAAACATTAAACTTACTTT  Raphanus raphanistrum subsp. maritimus
EW721723       --> TCCTCTCAA-GCTGACCCAATTCATTCTCAAAAAACATTAAACTTACTTT  Raphanus sativus var. oleiformis
EW721426       --> TCCCCTCAA-GCCGACCCAATTCATTCTC-AAAAACATTAAACTTACTTT  Raphanus sativus var. oleiformis
FD553592       --> TCCTCTCAA-GCTGACCCAATTCATTCTCAAAAAACATTAAACTTACTTT  Raphanus raphanistrum subsp. landra
EW718369       --> TCCTCTCAA-GCCGACCCAATTCATTC-CCAAAAACATTAAACTTACTTT  Raphanus sativus var. oleiformis
EW718629       --> TCCTCTCAA-GCCGACCCAATTCATTC-CCAAAAACATTAAACTTACTTT  Raphanus sativus var. oleiformis

               301    -    351
UN22334        --> GCTCTAGGATGCTTGGTCACTTTTCTTGTAAACGCAAACTCTCCAAACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965133       <-- GCTCTAGGATGCTTGGTCACTTTTCTTGTAAACGCAAACTCTCCAAACTT
EW713519       <-- GCTCTAGGATGCTTGGTCACTTTTCTTGTAAACGCAAACTCTCCAAACTT
EW713520       <-- GCTCTAGGATGCTTGGTCACTTTTCTTGTAAACGCAAACTCTCCAAACTT
EW717430       <-- GCTCTAGGATGCTTGGTCACTTTTCTTGTAAACGCAAACTCTCCAAGCTT
EV528635       <-- GCTCTAGGATGCTTGGTCACTTTTCTTGTAAACGCAAACTCTCCAAACTT
FD557498       <-- GCTCTAGGATGCTTGGTCACTTTTCTTGTAAACGCAAACTCTCCAAACTT
EX750226       <-- GCTCTAGGATGCTTGGTCACTTTTCTTGTAAACGCAAACTCTCCAAACTT
EY925315       <-- GCTCTAGGATGCTTGGTCACTTTTCTTGTAAACGCAAACTCTCCAAACTT
EX756610       <-- GCTCTCGGATGCTTGGTCACTTTTCTTGTAAACACAAACTCTCCAAACTT
FD949334       <-- ............................TAAACGCAAACTCTCCAAACTT
FD572080       <-- ..................................................
FD944991       --> GCTCTAGGATGCTTGGTCACTTTTCTTGTAAACGCAAACTCTCCAAACTT
EV532571       --> GCTCTAGGATGCTTGGTCACTTTTCTTGTAAACGCAAACTCTCCAAACTT
EW721723       --> GCTCTAGGATGCTTGGTCACTTTTCTTGTAAACGCAAACTCTCCAAACTT
EW721426       --> GCTCTAGGATGCTTGGTCACTTTTCTTGTAAACGCAAACTCTCCAAGCTT
FD553592       --> GCTCTAGGATGCTTGGTCACTTTTCTTGTAAACGCAAACTCTCCAAACTT
EW718369       --> GCTCTAGGATGCTTGGTCACTTTTCTTGTAAACGCAAACTCTCCAAACTT
EW718629       --> GCTCTAGGATGCTTGGTCACTTTTCTTGTAAACGCAAACTCTCCAAACTT

               351    -    401
UN22334        --> ATGCCCAACTTTCCCCTCTGTGATCTTACAACGCACATGAGTTTTGCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965133       <-- ATGCCCAACTTTCCCCTCTGCGATCTTACAACGCACATGAGTTTTGCCAT
EW713519       <-- ATGCCCAACTTTCCCCTCTGTGATCTTACAACGCACATGAGTTTTGCCAT
EW713520       <-- ATGCCCAACTTTCCCCTCTGTGATCTTACAACGCACATGAGTTTTGCCAT
EW717430       <-- ATGCCCAACTTTCCCCTCTGTGATCTTACAACGCACATGAGTTTTGCCAT
EV528635       <-- ATGCCCAACTTTCCCCTCTGTGATCTTACAACGCACATGAGTTTTGCCAT
FD557498       <-- ATGCCCAACTTTCCCCTCTGTGATCTTACAACGCACATGAGTTTTGCCAT
EX750226       <-- ATGCCCAACTTTCCCCTCTGTGATCTTACAACGCACATGAGTTTTGCCAT
EY925315       <-- ATGCCCAACTTTCCCCTCTGTGATCTTACAACGCACATGAGTTTTGCCAT
EX756610       <-- GTGCCCGACTTTCCCCTCTGTGATCTTACAACGCACATGAGTTTTGCCAT
FD949334       <-- ATGCCCAACTTTCCCCTCTGTGATCTTACAACGCACATGAGTTTTGCCAT
FD572080       <-- ..................................................
FD944991       --> ATGCCCAACTTTCCCCTCTGTGATCTTACAACGCACATGATTTTTGCCAT
EV532571       --> ATGCCCAACTTTCCCCTCTGTGATCTTACAACGCACATGAGTTTTGCCAT
EW721723       --> ATGCCCAACTTTCCCCTCTGTGATCTTACAACGCACATGAGTTTTGCCAT
EW721426       --> ATGCCCAACTTTCCCCTCTGTGATCTTACAACGCACATGAGTTTTGCCAT
FD553592       --> ATGCCCAACTTTCCCCTCTGTGATCTTACAACGCACATGAGTTTTGCCAT
EW718369       --> ATGCCCAACTTTCCCCTCTGTGATCTTACAACGCACATGAGTTTTGCCAT
EW718629       --> ATGCCCAACTTTCCCCTCTGTGATCTTACAACGCACATGAGTTTTGCCAT

               401    -    451
UN22334        --> TGTAGATCCTCACCGACGAATCAACATACTCTGGCAGAATCGTCGACCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965133       <-- TGTAGATCCTCACCGACGAATCAACATACTCTGGCAGAATCGTCGACCTC
EW713519       <-- TGTAGATCCTCGCCGACGAATCAACATACTCTGGCAGAATCGTCGACCTC
EW713520       <-- TGTAGATCCTCGCCGACGAATCAACATACTCTGGCAGAATCGTCGACCTC
EW717430       <-- TGTAGATCCTCACCGACGAATCAACATACTCTGGCAGAATCGTCGACCTC
EV528635       <-- TGTAGATCCTCACCGACGAATCAACATACTCTGGCAGAATCGTCGACCTC
FD557498       <-- TGTAGATCCTCACCGACGAATCAACATACTCTGGCAGAATCGTCGACCTC
EX750226       <-- TGTAGATCCTCACCGACGAATCAACATACTCTGGCAGAATCGTCGACCTC
EY925315       <-- TGTAGATCCTCACCGACGAATCAACATACTCTGGCAGAATCGTCGACCTC
EX756610       <-- TGTAGATCCTCACCGACGAATCAACATACTCTGGCAGGATCGTCGACCTC
FD949334       <-- TGTAGATCCTCACCGACGAATCAACATACTCTGGCAGAATCGTCGACCTC
FD572080       <-- ..................................................
FD944991       --> TGTAAATCCTCACCGACAAATCAACATACTCTGGCAAAATCGTCGACCTC
EV532571       --> TGTAGATCCTCACCGACGAATCAACATACTCTGGCAGAATCGTCGACCTC
EW721723       --> TGTAGATCCTCACCGACGAATCAACATACTCTGGCAGAATCGTCGACCTC
EW721426       --> TGTAGATCCTCACCGACGAATCAACATACTCTGGCAGAATCGTCGACCTC
FD553592       --> TGTAGATCCTCACCGACGAATCAACATACTCTGGCAGAATCGTCGACCTC
EW718369       --> TGTAGATCCTCGCCGACGAATCAACATACTCTGGCAGAATCGTCGACCTC
EW718629       --> TGTAGATCCTCGCCGACGAATCAACATACTCTGGCAGAATCGTCGACCTC

               451    -    501
UN22334        --> CTTGACCATATTTTCCTGTTCAGAGCTGCGTTTTTCTTCTTCATCAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965133       <-- CTTGACCATATTTTCCTGTTCAGAGCTGCGTTTTTCTTCTTCATCAAGAA
EW713519       <-- CTTGACCATATTTTCCTGTTCAGAGCTGCGTTTTTCTTCTTCATCAAGAA
EW713520       <-- CTTGACCATATTTTCCTGTTCAGAGCTGCGTTTTTCTTCTTCATCAAGAA
EW717430       <-- CTTGACCATATTTTCCTGTTCAGAGCTGCGTTTTTCTTCTTCATCAGGAA
EV528635       <-- CTTGACCATATTTTCCTGTTCAGAGCTGCGTTTTTCTTCTTCATCAAGAA
FD557498       <-- CTTGACCATATTTTCCTGTTCAGAGCTGCGTTTTTCTTCTTCATCAAGAA
EX750226       <-- CTTGACCATATTTTCCTGTTCAGAGCTGCGTTTTTCTTCTTCATCAAGAA
EY925315       <-- CTTGACCATATTTTCCTGTTCAGAGCTGCGTTTTTCTTCTTCATCAAGAA
EX756610       <-- CTTGACCATATTTTCCTGTTCAGAGCTGCGTTTTTCTTCTTCATCAAGAA
FD949334       <-- CTTGACCATATTTTCCTGTTCAGAGCTGCGTTTTTCTTCTTCATCAAGAA
FD572080       <-- ..................................................
FD944991       --> CTTGACCATATTTTCCTGTTCAGAGCTGCGTTTTTCTTCTTCATCAAGAA
EV532571       --> CTTGACCATATTTTCCTGTTCAGAGCTGCGTTTTTCTTCTTCATCAAGAA
EW721723       --> CTTGACCATATTTTCCTGTTCAGAGCTGCGTTTTTCTTCTTCATCAAGAA
EW721426       --> CTTGACCATATTTTCCTGTTCAGAGCTGCGTTTTTCTTCTTCATCAGGAA
FD553592       --> CTTGACCATATTTTCCTGTTCAGAGCTGCGTTTTTCTTCTTCATCAAGAA
EW718369       --> CTTGACCATATTTTCCTGTTCAGAGCTGCGTTTTTCTTCTTCATCAAGAA
EW718629       --> CTTGACCATATTTTCCTGTTCAGAGCTGCGTTTTTCTTCTTCATCAAGAA

               501    -    551
UN22334        --> GGCGTCAACGAACGGATCTTTCCATACAGATCGGCTCACCATCTTATTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965133       <-- GGCGTCAACGAACGGATCTTTCCATACAGATCGGCTCACCATCTTATTGC
EW713519       <-- GGCGTCAACGAACGGATCTTTCCATACAGATCGGCCCACCATCTTATTGC
EW713520       <-- GGCGTCAACGAACGGATCTTTCCATACAGATCGGCCCACCATCTTATTGC
EW717430       <-- GGCGTCAACGAACGGATCTTTCCATACAGATCGGCCCACCATCTTATTGC
EV528635       <-- GGCGTCAACGAACGGATCTTTCCATACAGATCGGCTCACCATCTTATTGC
FD557498       <-- GGCGTCAACGAACGGATCTTTCCATACAGATCGGCTCACCATCTTATTGC
EX750226       <-- GGCGTCAACGAACGGATCTTTCCATACAGATCGGCTCACCATCTTATTGC
EY925315       <-- GGCGTCAACGAACGGATCTTTCCATACAGATCGGCTCACCATCTTATTGC
EX756610       <-- GGCGTCAACGAACGGATCTTTCCATACAGATCGGCTCACCATCTTATTGC
FD949334       <-- GGCGTCAACGAACGGATCTTTCCATACAGATCGGCTCACCATCTTATTGC
FD572080       <-- ..................................................
FD944991       --> GGCGTCAACGAACGGATCTTTCCATACAGATCGGCTCACCATCTTATTGC
EV532571       --> GGCGTCAACGAACGGATCTTTCCATACAGATCGGCTCACCATCTTATTGC
EW721723       --> GGCGTCAACGAACGGATCTTTCCATACAGATCGGCTCACCATCTTATTGC
EW721426       --> GGCGTCAACGAACGGATCTTTCCATACAGATCGGCCCACCATCTTATTGC
FD553592       --> GGCGTCAACGAACGGATCTTTCCATACAGATCGGCTCACCATCTTATTGC
EW718369       --> GGCGTCAACGAACGGATCTTTCCATACAGATCGGCCCACCATCTTATTGC
EW718629       --> GGCGTCAACGAACGGATCTTTCCATACAGATCGGCCCACCATCTTATTGC

               551    -    601
UN22334        --> CTTTCTTCTCATCTTCTGTACCTTCGACCAAAGATAACGGCAAGCTTGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965133       <-- CTTTCTTCTCATCTTCTGTACCTTCGACCAAAGATAACGGCAAGCTTGGC  Raphanus raphanistrum subsp. maritimus
EW713519       <-- CTTTCTTCTCATCTTCTTTACCTTCAACCAAAGATAACGGCAAGCTTGGC  Raphanus sativus var. oleiformis
EW713520       <-- CTTTCTTCTCATCTTCTTTACCTTCAACCAAAGATAACGGCAAGCTTGGC  Raphanus sativus var. oleiformis
EW717430       <-- CTTTCTTCTCATCTTCTGTACCTTCAACCAAAGATAACGGCAAGCTTGGC  Raphanus sativus var. oleiformis
EV528635       <-- CTTTCTTCTCATCTTCTGTACCTTCGACCAAAGATAACGGCAAGCTTGGC  Raphanus raphanistrum subsp. maritimus
FD557498       <-- CTTTCTTCTCATCTTC--TACCTTCGACCAAAGATAACGGCAAGCTTGGC  Raphanus raphanistrum subsp. landra
EX750226       <-- CTTTCTTCTCATCTTCTGTACCTTCGACCAAAGATAACGGCAAGCTTGGC  Raphanus raphanistrum subsp. maritimus
EY925315       <-- CTTTCTTCTCATCTTC--TACCTTCGACCAAAGATAACGGCAAGCTTGGC  Raphanus raphanistrum subsp. landra
EX756610       <-- CTTTCTTCTCATCTTCTGTACCTTCAACCAAAGATAACGGCAAGCTTGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD949334       <-- CTTTCTTCTCATCTTCTGTACCTTCGACCAAAGATAACGGCAAGCTTGGC  Raphanus sativus cv Early Scarlet Globe
FD572080       <-- ..........................ACCAAAGATAACGGCAAGCTTGGC  Raphanus sativus cv Early Scarlet Globe
FD944991       --> CTTTCTTCTCATCTTCTGTACCTT..........................  Raphanus sativus cv Early Scarlet Globe
EV532571       --> CTTTCTTCTCATCTTCTGTACCTTCGACCAAAGATAACGGCAAGCTTGGC  Raphanus raphanistrum subsp. maritimus
EW721723       --> CTTTCTTCTCATCTTCTGTACCTTCGACCAAAGATAACGGCAAGCTTGGC  Raphanus sativus var. oleiformis
EW721426       --> CTTTCTTCTCATCTTCTGTACCTTCAACCAAAGATAACGGCAAGCTTGGC  Raphanus sativus var. oleiformis
FD553592       --> CTTTCTTCTCATCTTCT--ACCTTCGACCAAAGATAACGGCAAGCTTGGC  Raphanus raphanistrum subsp. landra
EW718369       --> CTTTCTTCTCATCTTCTTTACCTTCAACCAAAGATAACGGCAAGCTTGGC  Raphanus sativus var. oleiformis
EW718629       --> CTTTCTTCTCATCTTCTTTACCTTCAACCAAAGATAACGGCAAGCTTGGC  Raphanus sativus var. oleiformis

               601    -    651
UN22334        --> CATTCTTTTGCAGCATCCACACGGATGTTACACCCATTCAACTCCTGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965133       <-- CATTCTTTTGCAGCATCCACACGGATGTTACACCCATTCAACTCCTGTCC
EW713519       <-- CATTCTTTTGCAGCATCCACACGGATGTTACACCCATTCAACTCCTGTCC
EW713520       <-- CATTCTTTTGCAGCATCCACACGGATGTTACACCCATTCAACTCCTGTCC
EW717430       <-- CATTCTTTTGCAGCATCCACACGGATGTTACACCCATTCAACTCCTGTCC
EV528635       <-- CATTCTTTTGCAGCATCCACACGGATGTTACACCCATTCAACTCCTGTCC
FD557498       <-- CATTCTTTTGCAGCATCCACACGGATGTTACACCCATTCAACTCCTGTCC
EX750226       <-- CATTCTTTTGCAGCATCCACACGGATGTTACACCCATTCAACTCCTGTCC
EY925315       <-- CATTCTTTTGCAGCATCCACACGGATGTTACACCCATTCAACTCCTGTCC
EX756610       <-- CATTCTTTTGCAGCATCCACACGGATGTTACACCCATTCAACTCCTGTCC
FD949334       <-- CATTCTTTTGCAGCATCCACACGGATGTTACACCCATTCAACTCCTGTCC
FD572080       <-- CATTCTTCTGCAGCATCCACACGGATGTTACACCCATTCAACTCCTGTCC
FD944991       --> ..................................................
EV532571       --> CATTCTTTTGCAGCATCCACACGGATGTTACACCCATTCAACTCCTGTCC
EW721723       --> CATTCTTTTGCAGCATCCACACGGATGTTACACCCATTCAACTCCTGTCC
EW721426       --> CATTCTTTTGCAGCATCCACACGGATGTTACACCCATTCAACTCCTGTCC
FD553592       --> CATTCTTTTGCAGCATCCACACGGATGTTACACCCATTCAACTCCTGTCC
EW718369       --> CATTCTTTTGCAGCATCCACACGGATGTTACACCCATTCAACTCCTGTCC
EW718629       --> CATTCTTTTGCAGCATCCACACGGATGTTACACCCATTCAACTCCTGTCC

               651    -    701
UN22334        --> ATCCATAGCTGAAATAGCAGACTTGGCAGACTCCTCACTTGTGAAATTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965133       <-- ATCCATAGCTGAAATAGCAGACTTGGCAGGCTCCTCACTTGTGAAATTGA
EW713519       <-- ATCCATAGCTGAAATAGCAGACTTGGCAGACTCCTCACTTGTGAAATTGA
EW713520       <-- ATCCATAGCTGAAATAGCAGACTTGGCAGACTCCTCACTTGTGAAATTGA
EW717430       <-- ATCCATAGCTGAAATAGCAGACTTGGCAGACTCCTCACTTGTGAAATTGA
EV528635       <-- ATCCATAGCTGAAATAGCAGACTTGGCAGACTCCTCACTTGTGAAATTGA
FD557498       <-- ATCCATAGCTGAAATAGCAGACTTGGCAGACTCCTCACTTGTGAAATTGA
EX750226       <-- ATCCATAGCTGAAATAGCAGACTTGGCGGACTCCTCACTTGTGAAATTGA
EY925315       <-- ATCCATAGCTGAAATAGCAGACTTGGCAGACTCCTCACTTGTGAAATTGA
EX756610       <-- ATTCATAGCTGAAATAGCAGACTTGGCAGACTCCTCACTTGTGAAATTGA
FD949334       <-- ATCCATAGCTGAAATAGCAGACTTGGTAGACTCCTCACTTGTGAAATTGA
FD572080       <-- ATCCATAGCTGAAATAGCAGACTTGGCAGACTCCTCACTTGTGAAATTGA
FD944991       --> ..................................................
EV532571       --> ATCCATAGCTGAAATAGCAGACTTGGCAGACTCCTCACTTGTGAAATTGA
EW721723       --> ATCCATAGCTGAAATAGCAGACTTGGCAGACTCCTCACTTGTGAAATTGA
EW721426       --> ATCCATAGCTGAAATAGCAGACTTGGCAGACTCCTCACTTGTGAAATTGA
FD553592       --> ATCCATAGCTGAAATAGCAGACTTGGCAGACTCCTCACTTGTGAAATTGA
EW718369       --> ATCCATAGCTGAAATAGCAGACTTGGCAGACTCCTCACTTGTGAAATTGA
EW718629       --> ATCCATAGCTGAAATAGCAGACTTGGCAGACTCCTCACTTGTGAAATTGA

               701    -    751
UN22334        --> CAAATCCATAACCCCTTGACCTTCCTGTCACTTTGTTTGTCATGACTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965133       <-- CAAATCCATAACCCCTTGACCTTCCTGTCACTTTGTTTGTCATGACTCTT
EW713519       <-- CAAATCCATAACCCCTTGACCTTCCTGTCACTTTGTTTGTCATGACTCTT
EW713520       <-- CAAATCCATAACCCCTTGACCTTCCTGTCACTTTGTTTGTCATGACTCTT
EW717430       <-- CAAATCCATAACCCCTTGACCTTCCTGTCACTTTGTTTGTCATGACTCTT
EV528635       <-- CAAATCCATAACCCCTTGACCTTCCTGTCACTTTGTTTGTCATGACTCTT
FD557498       <-- CAAATCCATAACCCCTTGACCTTCCTGTCACTTTGTTTGTCATGACTCTT
EX750226       <-- CAAATCCATAACCCCTTGACCTTCCTGTCACTTTGTTTGTCATGACTCTT
EY925315       <-- CAAATCCATAACCCCTTGACCTTCCTGTCACTTTGTTTGTCATGACTCTT
EX756610       <-- CAAATCCATAACCCCTTGACCTTCCTGTCACTTTGTTTTTCATGACTCTT
FD949334       <-- CAAATCCATAACCCCTTGACCTTCCTGTCACTTTGTTTGTCATGACTCTT
FD572080       <-- CAAATCCATAACCCCTTGACCTTCCTGTCACTTTGTTTGTCATGACTCTT
FD944991       --> ..................................................
EV532571       --> CAAATCCATAACCCCTTGACCTTCCTGTCACTTTGTTTGTCATGACTCTT
EW721723       --> CAAATCCATAACCCCTTGACCTTCCTGTCACTTTGTTTGTCATGACTCTT
EW721426       --> CAAATCCATAACCCCTTGACCTTCCTGTCACTTTGTTTGTCATGACTCTT
FD553592       --> CAAATCCATAACCCCTTGACCTTCCTGTCACTTTGTTTGTCATGACTCTT
EW718369       --> CAAATCCATAACCCCTTGACCTTCCTGTCACTTTGTTTGTCATGACTCTT
EW718629       --> CAAATCCATAACCCCTTGACCTTCCTGTCACTTTGTTTGTCATGACTCTT

               751    -    801
UN22334        --> GCCTCTGTCACTCCATTGAAGGTAGAGAAAGCATCCTTCAAGGAATGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965133       <-- GCCTCTGTCACTCCATTGAAGGTAGAGAAAGCATCCTTCAAGGAATGGTC
EW713519       <-- GCCTCTGTCACTCCATTGAAGGTAGAGAAAGCATCCTTCAAGGAATGGTC
EW713520       <-- GCCTCTGTCACTCCATTGAAGGTAGAGAAAGCATCCTTCAAGGAATGGTC
EW717430       <-- GCCTCTGTCACTCCATTGAAGGTAGAGAAAGCATCCTTCAAGGAATGGTC
EV528635       <-- GCCTCTGTCACTCCATTGAAGGTAGAGAAAGCATCCTTCAAGGAATGGTC
FD557498       <-- GCCTCTGTCACTCCATTGAAGGTAGAGAAAGCATCCTTCAAGGAATGGTC
EX750226       <-- GCCTCTGTCACTCCATTGAAGGTAGAGAAAGCATCCTTCAAGGAATGGTC
EY925315       <-- GCCTCTGTCACTCCATTGAAGGTAGAGAAAGCATCCTTCAAGGAATGGTC
EX756610       <-- GCCTCTGTCACTCCATTGAAGGTAGAGAAAGCATCCTTCAAGGAATGGTC
FD949334       <-- GCCTCTGTCACTCCATTGAAGGTAGAGAAAGCATCCTTCAAGGAATGGTC
FD572080       <-- GCCTCTGTCACTCCATTGAAGGTAGAGAAAGCATCCTTCAAGGAATGGTC
FD944991       --> ..................................................
EV532571       --> GCCTCTGTCACTCCATTGAAGGTAGAGAAAGCATCCTTCAAGGAATGGTC
EW721723       --> GCCTCTGTCACTCCATTGAAGGTAGAGAAAGCATCCTTCAAGGAATGGTC
EW721426       --> GCCTCTGTCACTCCATTGAAGGTAGAGAAAGCATCCTTCAAGGAATGGTC
FD553592       --> GCCTCTGTCACTCCATTGAAGGTAGAGAAAGCATCCTTCAAGGAATGGTC
EW718369       --> GCCTCTGTCACTCCATTGAAGGTAGAGAAAGCATCCTTCAAGGAATGGTC
EW718629       --> GCCTCTGTCACTCCATTGAAGGTAGAGAAAGCATCCTTCAAGGAATGGTC

               801    -    851
UN22334        --> GTCAGTTCCGGGCGACAGGCCACCAATGAAAAGTTTTGTGGACATGTAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965133       <-- GTCAGTTCCTGGCGATAGGCCACCAATGAAAAGTTTTGTGGACATGTAGC  Raphanus raphanistrum subsp. maritimus
EW713519       <-- GTCAGTTCCGGGCGACAGGCCACCAATGAAAAGTTTTGTGGACATGTAGC  Raphanus sativus var. oleiformis
EW713520       <-- GTCAGTTCCGGGCGACAGGCCACCAATGAAAAGTTTTGTGGACATGTAGC  Raphanus sativus var. oleiformis
EW717430       <-- GTCAGTTCCGGGCGACAGGCCACCAATGAAAAGTTTTGTGGACATGTAGC  Raphanus sativus var. oleiformis
EV528635       <-- GTCAGTTCCTGGCGATAGGCCACCAATGAAAAGTTTTGTGGACATGTAGC  Raphanus raphanistrum subsp. maritimus
FD557498       <-- GTCAGTTCCGGGCGACAGGCCACCAATGAAAAGTTTTGTGGACATGTAGC  Raphanus raphanistrum subsp. landra
EX750226       <-- GTCAGTTCCTGGCGATTGGCCACCAATGAAAAGTTTTGTGGACATGTAGC  Raphanus raphanistrum subsp. maritimus
EY925315       <-- GTCAGTTCCGGGCGACAGGCCACCAATGAAAAGTTTTGTGGACATGTAGC  Raphanus raphanistrum subsp. landra
EX756610       <-- GTCAGTTCCGGGCGATAGGCCACCAATGAAAAGTTTTGTGGACATGTAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD949334       <-- GTCAGTTCCGGGCGACAGGCCACCAATGAAAAGTTTTGTGGACATGTAGC  Raphanus sativus cv Early Scarlet Globe
FD572080       <-- GTCAGTTCCGGGCGACAGGCCACCAATGAAAAGTTTTGTGGACATGTAGC  Raphanus sativus cv Early Scarlet Globe
FD944991       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV532571       --> GTCAGTTCCTGGCGATAGGCCACCAATGAAAAGTTTTGTGGACATGTAGC  Raphanus raphanistrum subsp. maritimus
EW721723       --> GTCAGTTCCTGGCGATAGGCCACCAATGAAAAGTTTTGTGGACATGTAGC  Raphanus sativus var. oleiformis
EW721426       --> GTCAGTTCCGGGCGACAGGCCACCAATGAAAAGTTTTGTGGACATGTAGC  Raphanus sativus var. oleiformis
FD553592       --> GTCAGTTCCGGGCGACAGGCCACCAAT.......................  Raphanus raphanistrum subsp. landra
EW718369       --> GTCAGTTCCGGGCGACAGGCCACCAATGAAAAGTTTTGTGGACATGTAGC  Raphanus sativus var. oleiformis
EW718629       --> GTCAGTTCCGGGCGACAGGCCACCAATGAAAAGTTTTGTGGACATGTAGC  Raphanus sativus var. oleiformis

               851    -    901
UN22334        --> GGAGCATTGATGTCACTGGAACATTTCTGTTCTGTAAAACCCCGAGTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965133       <-- GGAGCATTGATGTCACTGGAACATTTCTGTTCTGTAAACTCCCGAGTTTG  Raphanus raphanistrum subsp. maritimus
EW713519       <-- GGAGCATTGATGTCACTGGAACATTTCTGTTCTGTAAAACCCCGAGTTTG  Raphanus sativus var. oleiformis
EW713520       <-- GGAGCATTGATGTCACTGGAACATTTCTGTTCTGTAAAACCCCGAGTTTG  Raphanus sativus var. oleiformis
EW717430       <-- GGAGCATTGATGTCACTGGAACATTTCTGTTCTGTAAAACCCCGAGTTTG  Raphanus sativus var. oleiformis
EV528635       <-- GGAGCATTGATGTCACTGGAACATTTCTGTTCTGTAAACTCCCGAGTTTG  Raphanus raphanistrum subsp. maritimus
FD557498       <-- GGAGCATTGATGTCACTGGAACATTTCTGTTCTGTAAAACCCCGAGTTTG  Raphanus raphanistrum subsp. landra
EX750226       <-- GGAGCATTGATGTCACTGGAACATTTCTGTTCTGTAAACTCCCGAGTTTG  Raphanus raphanistrum subsp. maritimus
EY925315       <-- GGAGCATTGATGTCACTGGAACATTTCTGTTCTGTAAAACCCCGAGTTTG  Raphanus raphanistrum subsp. landra
EX756610       <-- GGAGCATTGATGTCACTGGAACATTTCTGTTCTGTAAAATCCCGAGTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD949334       <-- GGAGCATTGATGTCACTGGAACATTTCTGTTCTGTAAAACCCCGAGTTTG  Raphanus sativus cv Early Scarlet Globe
FD572080       <-- GGAGCATTGATGTCACTGGAACATTTCTGTTCTGTAAAACCCCGAGTTTG  Raphanus sativus cv Early Scarlet Globe
FD944991       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV532571       --> GGAGCATTGATGTCACTGGAACATTTCTGTTCTGTAAACTCCCGAGTTTG  Raphanus raphanistrum subsp. maritimus
EW721723       --> GGAGCATTGATGTCACTGGAACATTTCTGTTCTGTAAA-CCCCGAGTTTG  Raphanus sativus var. oleiformis
EW721426       --> GGAGCATTGATGTCACTGGAACATTTCTGTTCTGTAAA-CCCCGAGTTTG  Raphanus sativus var. oleiformis
FD553592       --> ..................................................  Raphanus raphanistrum subsp. landra
EW718369       --> GGAACATTGATGTCACTGGAACATTTCTGTTCTGTAAAACCCCGAGTTTG  Raphanus sativus var. oleiformis
EW718629       --> GGAGCATTGATGTCACTGGAACATTTCTGTTCTGTAAAACCCCGAGTTTG  Raphanus sativus var. oleiformis

               901    -    951
UN22334        --> GCGCAGACAGCCATTTTTTCGATGTCTGGAAATCGATAGCTGAGATCACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965133       <-- GCGCAGACAGCCATTTTTTCGATGTCTGGAAATCGATAGCTGAGATCACc
EW713519       <-- GTGCAGACAGCCATTTTTTCGATGTCTGGAAATCGATAGCTGAGATCACG
EW713520       <-- GTGCAGACAGCCATTTTTTCGATGTCTGGAAATCGATAGCTGAGATCACG
EW717430       <-- GTGCAGACAGCCATTT--TCGATGTCTGGAAATCGATAGCTGAGATCACG
EV528635       <-- GCGCAGACAGCCATTTTTTCGATGTCTGGAAATCGATAGCTGAGATCACG
FD557498       <-- GCGCAGACAGCCATTTTTTCGATGTCTGGAAATCGATAGCTGAGATCACG
EX750226       <-- GCGCAGACAGCCATTTTTTCGATGTCTGGAAATCGATAGCTAAGATCACG
EY925315       <-- GCGCAGACAGCCATTTTTTCGATGTCTGGAAATCGATAGCTGAGATCACG
EX756610       <-- GTGCAGACAGCCATTTTTTCGATGTCTGGAAATCGATAGCTGAGATCACG
FD949334       <-- GCGCAGACAGCCATTTTTTCGATGTCTGGAAATCGATAGCTGAGATCACG
FD572080       <-- GCGCAGACGGCCATTTTTTCGATGTCTGGAAATCGATAGCTGAGATCACG
FD944991       --> ..................................................
EV532571       --> GCGCAGACAGCCATTTTTTCGATGTCTGGAAATCGATAGCTGAGATCACG
EW721723       --> GCGCAGACAGC-ATTTTTcgat............................
EW721426       --> GTGCAGACAGCCATTTT--CGATGTCTGGAA-TCGATAGCTGAGATCACG
FD553592       --> ..................................................
EW718369       --> GTGCAGACAGCCATTTTTTCGATGTCTGGAAATCGATAGCTGAGATCACG
EW718629       --> GTGCAGACAGCCATTTTTTCGATGTCTGGAAATCGATAGCTGAGATCACG

               951    -   1001
UN22334        --> TTCGTCGTCGATTTTTGGGGGCAGATGGGTGACAACAAGTTTACACTCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965133       <-- c.................................................
EW713519       <-- TTCGTCGTCGATTTTTGGGGGCAGATGGtaaccc................
EW713520       <-- TTCGTCGTCGATTTTTGGGGGCAGATGGtaacccccc.............
EW717430       <-- TTCGTCGTCGATTTTTGcc...............................
EV528635       <-- TTCGTCGTCGATTTTTGGGGGCAGATGGGTAACAACAAGTTTACACTCGT
FD557498       <-- TTCGTCGTCcc.......................................
EX750226       <-- TTCGTCGTCcgcc.....................................
EY925315       <-- TTCGTCGTCcc.......................................
EX756610       <-- TTCGTCGTCGcc......................................
FD949334       <-- TTCGTCGTCcc.......................................
FD572080       <-- TTCGTCGTCGATTTTTGGGGGCAGATGGGTGACAACAAGTTTACACTCGT
FD944991       --> ..................................................
EV532571       --> TTCGTCGTCGATTTTGGGG...............................
EW721723       --> ..................................................
EW721426       --> TTCGTCGTCGATTTTgc.................................
FD553592       --> ..................................................
EW718369       --> TTCGTCGT..........................................
EW718629       --> TTCGTCGTCGATTTTTGGGGGCAGATGGtaaccc................

               1001   -   1051
UN22334        --> TAGGGCTTGTCGCGATCTGAACCAAGCCCGGTTCTATCAACAGGTCTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965133       <-- ..................................................
EW713519       <-- ..................................................
EW713520       <-- ..................................................
EW717430       <-- ..................................................
EV528635       <-- TAGGGCTTGTCGCGATCTGAAACAAGCCCGGTTCTcc.............
FD557498       <-- ..................................................
EX750226       <-- ..................................................
EY925315       <-- ..................................................
EX756610       <-- ..................................................
FD949334       <-- ..................................................
FD572080       <-- TAGGGCTTGTCGCGATCTGAACCAAGCCCGGTTCTATCAACAGGTCTCAT
FD944991       --> ..................................................
EV532571       --> ..................................................
EW721723       --> ..................................................
EW721426       --> ..................................................
FD553592       --> ..................................................
EW718369       --> ..................................................
EW718629       --> ..................................................

               1051   -   1101
UN22334        --> CTGTCTCCCTATTTTCAATTGGTTTCTACCGGTCTTGTCTTTTTTTGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965133       <-- ..................................................
EW713519       <-- ..................................................
EW713520       <-- ..................................................
EW717430       <-- ..................................................
EV528635       <-- ..................................................
FD557498       <-- ..................................................
EX750226       <-- ..................................................
EY925315       <-- ..................................................
EX756610       <-- ..................................................
FD949334       <-- ..................................................
FD572080       <-- CTGTCTCCCTATTTTCAATTGGTTTCTACCGGTCTTGTCTTTTTTTGGTT
FD944991       --> ..................................................
EV532571       --> ..................................................
EW721723       --> ..................................................
EW721426       --> ..................................................
FD553592       --> ..................................................
EW718369       --> ..................................................
EW718629       --> ..................................................

               1101   -   1151
UN22334        --> TACGTATAATCAACCCAGCTATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~
FD965133       <-- ........................
EW713519       <-- ........................
EW713520       <-- ........................
EW717430       <-- ........................
EV528635       <-- ........................
FD557498       <-- ........................
EX750226       <-- ........................
EY925315       <-- ........................
EX756610       <-- ........................
FD949334       <-- ........................
FD572080       <-- TACGTATAATCAACCCAGCTATCC
FD944991       --> ........................
EV532571       --> ........................
EW721723       --> ........................
EW721426       --> ........................
FD553592       --> ........................
EW718369       --> ........................
EW718629       --> ........................