Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN22393

               1      -     51
UN22393        --> GGATCACCATTTTATTTGCTGCTCAACGAAATCAAAAGAAGGTTTTAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY943912       <-- .....................gcgAACGAAATCAAAAGAAGGTTTTAAAG
FD951728       <-- ......................................AAGGTTTTAAAG
FD983441       <-- ..................................................
FD968283       <-- ..................................................
FD554718       <-- ..................................................
FD529505       <-- ..................................................
FD937569       --> GGATCACCATTTTATTTGCTGCTCAACGAAATCAAAAGAAGGTTTTAAAG
EY948159       --> .....................gcgAACGAAATCAAAAGAAGGTTTTAAAG
FD955696       --> ......................................AAGGTTTTAAAG
FD564064       --> .....................................ggAGGTTTTAAAG
EV526976       --> ..................................................
FD962764       --> ..................................................
FD962902       --> ..................................................
FD987370       --> ..................................................
EX894856       --> ..................................................

               51     -    101
UN22393        --> GCCGGAGAAGTTGGGTAGTGGTCTGGATCCGCCGGCGAACAACAAGCACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY943912       <-- GCCGGAGAAGTTGGGTAGTGGTCTGGATCCGCCGGCGAACAACAAGCACC
FD951728       <-- GCCGGAGAAGTTGGGTAGTGGTCTGGATCCGCCGGCGAACAACAAGCACC
FD983441       <-- ........................GGATCCGCCGGCGAACAACAAGCACC
FD968283       <-- ...........................tctGCCGGCGAACAACAAGCACC
FD554718       <-- ................................................ca
FD529505       <-- ..................................................
FD937569       --> GCCGGAGAAGTTGGGTAGTGGTCTGGATCCGCCGGCGAACAACAAGCACC
EY948159       --> GCCGGAGAAGTTGGGTAGTGGTCTGGATCCGCCGGCGAACAACAAGCACC
FD955696       --> GCCGGAGAAGTTGGGTAGTGGTCTGGATCCGCCGGCGAACAACAAGCACC
FD564064       --> GCCGGAGAAGTTGGGTAGTGGTCTGGATCCGC-GGCGAACAACAAGCACC
EV526976       --> .......................gGGATCCGCCGGCGAACAACAAGCACC
FD962764       --> .....................gcgGGATCCGCCGGCGAACAACAAGCACC
FD962902       --> .....................gcgGGATCCGCCGGCGAACAACAAGCACC
FD987370       --> ........................GGATCCGCCGGCGAACAACAAGCACC
EX894856       --> ..................................GCGAACAGCAAGCACC

               101    -    151
UN22393        --> GTCACATTAGTCCTCTTTTCATTTCGCTGGTAATCAAGACAGGTAACTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY943912       <-- GTCACATTAGTCCTCTTTTCATTTCGCTGGTAATC----AAGGTAACTCT  Raphanus sativus cv Rat-Tail Radish #3870
FD951728       <-- GTCACATTAGTCCTCTTTTCATTTCGCTGGTAATC----AAGGTAACTCT  Raphanus sativus cv Rat-Tail Radish #3870
FD983441       <-- GCCACATTAGTCCTCTTTTCATTTCGCTGGAAATCAAGACAGGTAACTCT  Raphanus raphanistrum subsp. landra
FD968283       <-- GTCACATTAGTCCTCTTTTCATTTCGTTGGAAATCAAGACAGGTAATTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD554718       <-- acaagcaccGTCCTCTTTTCTTTTCGCTGGAAATCAAGACAGGTAACTCT  Raphanus raphanistrum subsp. landra
FD529505       <-- .................................tttAGACAGGTAACTCT  Raphanus raphanistrum subsp. maritimus
FD937569       --> GTCACATTAGTCGTCTTTTCATTTCGCTGGTAATCAAGACAGGTAATTCT  Raphanus sativus var. oleiformis
EY948159       --> GTCACATTAGTCCTCTTTTCATTTCGCTGGTAATCAAG----GTAACTCT  Raphanus sativus cv Rat-Tail Radish #3870
FD955696       --> GTCACATTAGTCCTCTTTTCATTTCGCTGGTAATCAAG----GTAACTCT  Raphanus sativus cv Rat-Tail Radish #3870
FD564064       --> GTCACATTAGTCCTCTTTTCATTTCGCTG---------ACAGGTAACTCT  Raphanus sativus var. oleiformis
EV526976       --> GTCACATTAGTCCTCTTTTCATTTCGCTGGTAGTCAAGACAGGTAACTCT  Raphanus raphanistrum subsp. maritimus
FD962764       --> GTCACATTAGTCCTCTTTTCATTTCGCTGGTAATCAAGACAGGTAACTCT  Raphanus raphanistrum subsp. maritimus
FD962902       --> GTCACATTAGTCCTCTTTTCATTTCGCTGGTAATCAAGACAGGTAACTCT  Raphanus raphanistrum subsp. maritimus
FD987370       --> GCCACATTAGTCCTCTTTTCATTTCGCTGGAAATCAAGACAGGTAACTCT  Raphanus raphanistrum subsp. landra
EX894856       --> GTCACATTAGTCGTCTTTTCATTTCGCTGGTAATCAAGACAGGTAACTCT  Raphanus sativus cv Early Scarlet Globe

               151    -    201
UN22393        --> TGTGGCAAGCAGAAAAA-CACGGGAAGATGGAAGCCAAGTTCTTTAGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY943912       <-- TGTGGCAAGCAGAAAAA-CACGGGAAGATGGAAGCCAAGTTCTTTAGGTT
FD951728       <-- TGTGGCAAGCAGAAAAA-CACGGGAAGATGGAAGCCAAGTTCTTTAGGTT
FD983441       <-- TGTGGCAAGCAGAAAAA-CACGGGAAGATGGAAGCCAAGTTCTTTAGGTT
FD968283       <-- TGTGGCAAGCAGAAAAAAAACGGGAAGATGGAAGCCAAGTTCTTTAGGTT
FD554718       <-- TGTGGCAAGCAGAACAA-CACGGGAAGATGGAAGCCAAGTTCTTTAGGTT
FD529505       <-- TGTGGCAAGCAGAACAA-CACGGGAAGATGGAAGCCAAGTTCTTTAGGTT
FD937569       --> TGTGGCAAGCAGAAAAA-CACGGGAAGATGGAAGCCAAGTTCTTTAGGTT
EY948159       --> TGTGGCAAGCAGAAAAA-CACGGGAAGATGGAAGCCAAGTTCTTTAGGTT
FD955696       --> TGTGGCAAGCAGAAAAA-CACGGGAAGATGGAAGCCAAGTTCTTTAGGTT
FD564064       --> TGTGGCAAGCAGAACAA-CACGGGAAGATGGAAGCCAAGTTCTTTAGGTT
EV526976       --> TGTGGCAAGCAGAACAA-CACGGGAAGATGGAAGCCAAGTTCTTTAGGTT
FD962764       --> TGTGGCAAGCAGAACAA-CACGGGAAGATGGAAGCCAAGTTCTTTAGGTT
FD962902       --> TGTGGCAAGCAGAACAA-CACGGGAAGATGGAAGCCAAGTTCTTTAGGTT
FD987370       --> TGTGGCAAGCAGAAAAA-CACGGGAAGATGGAAGCCAAGTTCTTTAGGTT
EX894856       --> TGTGGCAAGCAGAACAA-CACGGGAAGATGGAAGCCAAGTTCTTTAGGTT

               201    -    251
UN22393        --> CTTGAAGATTGTTGGAGTTGGATACAAAGCCAGAGCTGAGGAGGCTGGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY943912       <-- CTTGAAGATTGTTGGAGTTGGATACAAAGCCAGAGCTGAGGAGGCAGGCC  Raphanus sativus cv Rat-Tail Radish #3870
FD951728       <-- CTTGAAGATTGTTGGAGTTGGATACAAAGCCAGAGCTGAGGAGGCAGGCC  Raphanus sativus cv Rat-Tail Radish #3870
FD983441       <-- CTTGAAGATTGTTGGAGTTGGATACAAAGCCAGAGCTGAGGAAGCTGGCC  Raphanus raphanistrum subsp. landra
FD968283       <-- CTTGAAGATTGTTGGAGTTGGATACAAAGCCAGAGCTGAGGAAGCTGGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD554718       <-- CTTGAAGATTGTTGGAGTTGGATACAAAGCCAGAGCTGAGGAAGCTGGCC  Raphanus raphanistrum subsp. landra
FD529505       <-- CTTGAAGATTGTTGGAGTTGGATACAAAGCCAGAGCTGAGGAGGCTGGCC  Raphanus raphanistrum subsp. maritimus
FD937569       --> CTTGAAGATTGTTGGAGTTGGATACAAAGCCAGAGCTGAGGAAGCTGGCC  Raphanus sativus var. oleiformis
EY948159       --> CTTGAAGATTGTTGGAGTTGGATACAAAGCCAGAGCTGAGGAGGCAGGCC  Raphanus sativus cv Rat-Tail Radish #3870
FD955696       --> CTTGAAGATTGTTGGAGTTGGATACAAAGCCAGAGCTGAGGAGGCAGGCC  Raphanus sativus cv Rat-Tail Radish #3870
FD564064       --> CTTGAAGATTGTTGGAGTTGGATACAAAGCCAGAGCTGAGGAGGCTGGCC  Raphanus sativus var. oleiformis
EV526976       --> CTTGAAGATTGTTGGAGTTGGATACAAAGCCAGAGCTGAGGAGGCTGGCC  Raphanus raphanistrum subsp. maritimus
FD962764       --> CTTGAAGATTGTTGGAGTTGGATACAAAGCCAGAGCTGAGGAGGCTGGCC  Raphanus raphanistrum subsp. maritimus
FD962902       --> CTTGAAGATTGTTGGAGTTGGATACAAAGCCAGAGCTGAGGAGGCTGGCC  Raphanus raphanistrum subsp. maritimus
FD987370       --> CTTGAAGATTGTTGGAGTTGGATACAAAGCCAGAGCTGAGGAAGCTGGCC  Raphanus raphanistrum subsp. landra
EX894856       --> CTTGAAGATTGTTGGAGTTGGATACAAAGCCAGAGCTGAGGAGGCTGGCC  Raphanus sativus cv Early Scarlet Globe

               251    -    301
UN22393        --> GTTTCTTATACCTTAAGCTGGGTTACAGTCACGAAGTCGAACTCGCGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY943912       <-- GTTTCTTATACCTTAAGCTGGGTTACAGTCACGAAGTCGAACTCGCGGTT
FD951728       <-- GTTTCTTATACCTTAAGCTGGGTTACAGTCACGAAGTCGAACTCGCGGTT
FD983441       <-- GTTTCTTATACCTTAAGCTGGGTTACAGTCACGAAGTTGAACTCGCGGTT
FD968283       <-- GTTTCTTATACCTCAAGCTGGGTTACAGTCACGAAGTCGAACTCGCGGTT
FD554718       <-- GTTTCTTATACCTTAAGCTGGGTTACAGTCACGAAGTTCAGCTCGCGGTT
FD529505       <-- GTTTCTTATACCTTAAGCTGGGTTACAGTCACGAAGTCGAACTCGCGGTT
FD937569       --> GTTTCTTATACCTTAAGCTGGGTTACAGTCACGAAGTCGAACTCGCGGTT
EY948159       --> GTTTCTTATACCTTAAGCTGGGTTACAGTCACGAAGTCGAACTCGCGGTT
FD955696       --> GTTTCTTATACCTTAAGCTGGGTTACAGTCACGAAGTCGAACTCGCGGTT
FD564064       --> GTTTCTTATACCTTAAGCTGGGTTACAGTCACGAAGTCGAACTCGCGGTT
EV526976       --> GTTTCTTATACCTTAAGCTGGGTTACAGTCACGAAGTCGAACTCGCGGTT
FD962764       --> GTTTCTTATACCTTAAGCTGGGTTACAGTCACGAAGTCGAACTCGCGGTT
FD962902       --> GTTTCTTATACCTTAAGCTGGGTTACAGTCACGAAGTCGAACTCGCGGTT
FD987370       --> GTTTCTTATACCTTAAGCTGGGTTACAGTCACGAAGTTGAACTCGCGGTT
EX894856       --> GTTTCTTATACCTTAAGCTGGGTTACAGTCACGAAGTCGAACTCGCGGTT

               301    -    351
UN22393        --> CCTCCGGCTGTTCGTGTCTTCTGTTTCAAGAACAATGTGGTTTGCTGCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY943912       <-- CCTCCGGCTGTTCGTGTCTTCTGTTTCAAGAACAATGTAGTTTGCTGCAC  Raphanus sativus cv Rat-Tail Radish #3870
FD951728       <-- CCTCCGGCTGTTCGTGTCTTCTGTTTCAAGAACAATGTAGTTTGCTGCAC  Raphanus sativus cv Rat-Tail Radish #3870
FD983441       <-- CCTCCGGCTGTTCGTGTCTTCTGTTTCAAGAACAATGTGGTTTGCTGCAC  Raphanus raphanistrum subsp. landra
FD968283       <-- CCTCCGGCTGTTCGTGTCTTCTGTTTCAAGAACAATGTGGTTTGCTGCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD554718       <-- CCTCCGGCTGTTCGTGTCTTCTGTTTCAAGAACAATTTGGTTTGCTGCAC  Raphanus raphanistrum subsp. landra
FD529505       <-- CCTCCGGCTGTTCGTGTCTTCTGTTTCAAGAACAATGTGGTTTGCTGCAC  Raphanus raphanistrum subsp. maritimus
FD937569       --> CCTCCGGCTGTTCGTGTCTTCTGTTTCAAGAACAATGTGGTTTGCTGCAC  Raphanus sativus var. oleiformis
EY948159       --> CCTCCGGCTGTTCGTGTCTTCTGTTTCAAGAACAATGTAGTTTGCTGCAC  Raphanus sativus cv Rat-Tail Radish #3870
FD955696       --> CCTCCGGCTGTTCGTGTCTTCTGTTTCAAGAACAATGTAGTTTGCTGCAC  Raphanus sativus cv Rat-Tail Radish #3870
FD564064       --> CCTCCGGCTGTTCGTGTCTTCTGTTTCAAGAACAATGTGGTTTGCTGCAC  Raphanus sativus var. oleiformis
EV526976       --> CCTCCGGCTGTTCGTGTCTTCTGTTTCAAGAACAATGTGGTTTGCTGCAC  Raphanus raphanistrum subsp. maritimus
FD962764       --> CCTCCGGCTGTTCGTGTCTTCTGTTTCAAGAACAATGTGGTTTGCTGCAC  Raphanus raphanistrum subsp. maritimus
FD962902       --> CCTCCGGCTGTTCGTGTCTTCTGTTTCAAGAACAATGTGGTTTGCTGCAC  Raphanus raphanistrum subsp. maritimus
FD987370       --> CCTCCGGCTGTTCGTGTCTTCTGTTTCAAGAACAATGTGGTTTGCTGCAC  Raphanus raphanistrum subsp. landra
EX894856       --> CCTCCGGCTGTTCGTGTCTTCTGTTTCAAGAACAATGTGGTTTGCTGCAC  Raphanus sativus cv Early Scarlet Globe

               351    -    401
UN22393        --> TGGGATTGACAAGGACAGGGTGCATCAGTTTGCTGCCACAGTCAGGAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY943912       <-- TGGGATTGACAAGGACAGGGTGCATCAGTTTGCTGCCACAGTCAGGAGTT  Raphanus sativus cv Rat-Tail Radish #3870
FD951728       <-- TGGGATTGACAAGGACAGGGTGCATCAGTTTGCTGCCACAGTCAGGAGTT  Raphanus sativus cv Rat-Tail Radish #3870
FD983441       <-- CGGGATCGACAAGGACAGGGTGCATCAGTTTGCTGCCACAGTCAGGAGTT  Raphanus raphanistrum subsp. landra
FD968283       <-- TGGGATTGACAAGGACAGGGTGCATCAGTTTGCTGCCACAGTCAGGAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD554718       <-- CGGGATCGACAAGGACAGGGTGCATCAGTTTGCTGCCACAGTCAGGAGTT  Raphanus raphanistrum subsp. landra
FD529505       <-- TGGGATTGACAAGGACAGGGTGCATCAGTTTGCTGCCACAGTCAGGAGTT  Raphanus raphanistrum subsp. maritimus
FD937569       --> CGGGATCGACAAGGACAGGGTGCATCAGTTTGCTGCCACAGTCAGGAGTT  Raphanus sativus var. oleiformis
EY948159       --> TGGGATTGACAAGGACAGGGTGCATCAGTTTGCTGCCACAGTCAGGAGTT  Raphanus sativus cv Rat-Tail Radish #3870
FD955696       --> TGGGATTGACAAGGACAGGGTGCATCAGTTTGCTGCCACAGTCAGGAGTT  Raphanus sativus cv Rat-Tail Radish #3870
FD564064       --> TGGGATTGACAAGGACAGGGTGCATCAGTTTGCTGCCACAGTCAGGAGTT  Raphanus sativus var. oleiformis
EV526976       --> TGGGATTGACAAGGACAGGGTGCATCAGTTTGCTGCCACAGTCAGGAGTT  Raphanus raphanistrum subsp. maritimus
FD962764       --> TGGGATTGACAAGGACAGGGTGCATCAGTTTGCTGCCACAGTCAGGAGTT  Raphanus raphanistrum subsp. maritimus
FD962902       --> TGGGATTGACAAGGACAGGGTGCATCAGTTTGCTGCCACAGTCAGGAGTT  Raphanus raphanistrum subsp. maritimus
FD987370       --> CGGGATCGACAAGGACAGGGTGCATCAGTTTGCTGCCACAGTCAGGAGTT  Raphanus raphanistrum subsp. landra
EX894856       --> TGGGATTGACAAGGACAGGGTGCATCAGTTTGCTGCCACAGTCAGGAGTT  Raphanus sativus cv Early Scarlet Globe

               401    -    451
UN22393        --> GCAAACCTCCTGAAGTTTACAAGGGAAAAGGCATCATGTACATCGACGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY943912       <-- GCAAACCTCCTGAAGTTTACAAGGGAAAAGGCATCATGTACATCGACGAA
FD951728       <-- GCAAACCTCCTGAAGTTTACAAGGGAAAAGGCATCATGTACATCGACGAA
FD983441       <-- GCAAACCTCCTGAAGTTTACAAGGGAAAAGGCATCATGTACATCGACGAA
FD968283       <-- GCAAACCTCCTGAAGTTTACAAGGGAAAAGGCATCATGTACATCGACGAA
FD554718       <-- GCAAACCTCCTGAAGTTTACAAGGGAAAAGGCATCATGTACATCGACGAA
FD529505       <-- GCAAACCTCCTGAAGTTTACAAGGGAAAAGGCATCATGTACATCGACGAA
FD937569       --> GCAAACCTCCTGAAGTTTACAAGGGAAAAGGCATCATGTACATCGACGAA
EY948159       --> GCAAACCTCCTGAAGTTTACAAGGGAAAAGGCATCATGTACATCGACGAA
FD955696       --> GCAAACCTCCTGAAGTTTACAAGGGAAAAGGCATCATGTACATCGACGAA
FD564064       --> GCAAACCTCCTGAAGTTTACAAGGGAAAAGGCATCATGTACATCGACGAA
EV526976       --> GCAAACCTCCTGAAGTTTACAAGGGAAAAGGCATCATGTACATCGACGAA
FD962764       --> GCAAACCTCCTGAAGTTTACAAGGGAAAAGGCATCATATACATCGACGAA
FD962902       --> GCAAACCTCCTGAAGTTTACAAGGGAAAAGGCATCATATACATCGACGAA
FD987370       --> GCAAACCTCCTGAAGTTTACAAGGGAAAAGGCATCATGTACATCGACGAA
EX894856       --> GCAAACCTCCTGAAGTTTACAAGGGAAAAGGCATCATGCACATCGACGAA

               451    -    501
UN22393        --> GTCGTCAAGAAGAAGGTTGGAAAGAAGTCGAAATAATCTTTCTTTTTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY943912       <-- GTCGTCAAGAAGAAGGTTGGAAAGAAGTCGAGATAATCTTTCTTTTTCTT
FD951728       <-- GTCGTCAAGAAGAAGGTTGGAAAGAAGTCGAAATAATCTTTCTTTTTCTC
FD983441       <-- GTCGTCAAGAAGAAGGTTGGAAAGAAGTCCAAATAATCTTTCTTTTTCTT
FD968283       <-- GTCGTCAAGAAGAAGGTCGGAAAGTAATCGAAATAATCTTTC---TTCTT
FD554718       <-- GTCGTCAAGAAGAAGGTTGGAAAGAAGTCGAAATAATCTTTCTTTTTCTT
FD529505       <-- GTCGTCAAGAAGAAGGTCGGAAAGAAGTCGAAATAATCTTTCTTTTTCTT
FD937569       --> GTCGTCAAGAAGAAGGTTGGAAAGAAGTCGAAATAATCTTTCTTTTTCTT
EY948159       --> GTCGTCAAGAAGAAGGTTGGAAAGAAGTCGAGATAATCTTTCTTTTTCTT
FD955696       --> GTCGTCAAGAAGAAGGTTGGAAAGAAGTCGAAATAATCTTTCTTTTTCTC
FD564064       --> GTCGTCAAGAAGAAGGTTGGAAAGAAGTCGAAATAATCTTTCTTTTTCTT
EV526976       --> GTCGTCAAGAAGAAGGTTGGAAAGAAGTCGAAATAATCTTTCTTTTTCTT
FD962764       --> GTCGTCAAGAAGAAGGTTGGAAAGAAGTCGAAATAATCTTTCTTTTTCTT
FD962902       --> GTCGTCAAGAAGAAGGTTGGAAAGAAGTCGAAATAATCTTTCTTTTTCTT
FD987370       --> GTCGTCAAGAAGAAGGTTGGAAAGAAGTCCAAATAATCTTTCTTTTTCTT
EX894856       --> GTCGTCAAGAAGAAGGTTGGAAAGAAGTCGAAATAATCTTTCTTTTTCTT

               501    -    551
UN22393        --> TCTCTATGCTTCTTTTGCATTTTGGTTTGCGGAGAACTTGGGTGTTAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY943912       <-- TCTCTATGCTTCTTTTTCATTTTGGTTTGCGGAGAACTTGGGTGTTAAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD951728       <-- TCTCTATGCTTCTTTTGCATTTTGGTTTGCGGAGAACTTGGGTGTTAAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD983441       <-- TCTCTATGCTTCTTTTGCATTTTGGTTTGCGGAGAACTTGGGTGAT-AGA  Raphanus raphanistrum subsp. landra
FD968283       <-- TCTCTATGCTTCTTTTGCATTTTGGTTTGCGGAGAACTTGGGTGAT-AGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD554718       <-- TCTCTATGCTTCTTTTGCATTTTGGTTTGCGGAGAACTTGGGTGAT-AGA  Raphanus raphanistrum subsp. landra
FD529505       <-- TCTCTATGCTTCTTTTGCATTTTGGTTT-CGGAGAACTTGGGTGTTAAGA  Raphanus raphanistrum subsp. maritimus
FD937569       --> TCTCTATGCTTCTTTTGCATTTTGGTTTGCGGAGAACTTGGGTGTTAAGA  Raphanus sativus var. oleiformis
EY948159       --> TCTCTATGCTTCTTTTTCATTTTGGTTTGCGGAGAACTTGGGTGTTAAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD955696       --> TCTCTATGCTTCTTTTGCATTTTGGTTTGCGGAGAACTTGGGTGTTAAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD564064       --> TCTCTATGCTTCTTTTGCATTTTGGTTTGCGGAGAACTTGGGTGTTAAGA  Raphanus sativus var. oleiformis
EV526976       --> TCTCTATGCTTCTTTTGCATTTTGGTTTGCGGAGAACTTGGGTGTTAAGA  Raphanus raphanistrum subsp. maritimus
FD962764       --> TCTCTATGCTTCTTTTGCATTTTGGTTTGCGGAGAACTTGGGTGTTAAGA  Raphanus raphanistrum subsp. maritimus
FD962902       --> TCTCTATGCTTCTTTTGCATTTTGGTTTGCGGAGAACTTGGGTGTTAAGA  Raphanus raphanistrum subsp. maritimus
FD987370       --> TCTCTATGCTTCTTTTGCATTTTGGTTTGCGGAGAACTTGGGTGAT-AGA  Raphanus raphanistrum subsp. landra
EX894856       --> TCTCTATGCTTCTTTTGCATTTTGGTTTGCGGAGAACTTGGGTGTTAAGA  Raphanus sativus cv Early Scarlet Globe

               551    -    601
UN22393        --> CTTGGGATTTGCTTGTTATAATAAGTTTTTTA-CTCTGATGTATGAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY943912       <-- CTTGGGATTTGCTTGTTATAATAAGTTTTCTA-Cac..............
FD951728       <-- CTTGGGATTTGCTTGTTATAATAAGTTTTCTA-CTTTGATGTATGAAACA
FD983441       <-- CTTGGGATTTGCTTGTTATAATAAGTTTTTTAACTCTGATGTATGAAACA
FD968283       <-- CTTGGGATTTGCTTGTTATAATAAGTTTTTTA-CTCTGATGTATGAAACA
FD554718       <-- CTTGGGATTTGCTTGTTATAATAAGTTTTTTAACTCTGATGTATGAAACA
FD529505       <-- CTTGGGATTTGCTTGTTATAATAAGTTTTTTA-CTCTGATGTATGAAACA
FD937569       --> CTTGGGATTTGCTTGTTATAATAAGTTTTCTA-C................
EY948159       --> CTTGGGATTTGCTTGTTATAATAAGTTTTCTA-Cac..............
FD955696       --> CTTGGGATTTGCTTGTTATAATAAGTTTTCTA-CTCTGATGTATGAAACA
FD564064       --> CTTGGGATTTGCTTGTTATAATAAGTTTTTTA-CTCTGATGTATGAAGCA
EV526976       --> CTTGGGATTTGCTTGTTATAATAAGTTTTTTA-CTCTGATGTATGAAACA
FD962764       --> CTTGGGATTTGCTTGTTATAATAAGTTTTTTA-CTCTGATGTATGAAACA
FD962902       --> CTTGGGATTTGCTTGTTATAATAAGTTTTTTA-CTCTGATGTATGAAACA
FD987370       --> CTTGGGATTTGCTTGTTATAATAAGTTTTTTAACTCTGATGTATGAAACA
EX894856       --> CTTGGGATTTGCTTGTTATAATAAGTTTTTTA-CTCTGATGTATGAAACA

               601    -    651
UN22393        --> TCATTTTGAGGTTAAGTCAGTTTTTATCAAACAAGATTAGAAGATTTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY943912       <-- ..................................................
FD951728       <-- TCATTT-GGGGTTAAGTCA-TTTTTATCAAACAAGATTAGAAGATTTTGT
FD983441       <-- TCATTTTGAGGTTAAGTCAGTTTTTATCAAACAAGATTAGAAGATTTTGT
FD968283       <-- TCATTTTGAGGTTAAGTCAGTTTTTAcc......................
FD554718       <-- TCATTTTGAGGTTAAGTCAGTTTTTATCAAACAAGATTAGAAGATTTTGT
FD529505       <-- TCATTTTGAGGTTAAGTCAGTTTTTATCAAACAAGATTAGAAGATTTTGT
FD937569       --> ..................................................
EY948159       --> ..................................................
FD955696       --> TCATTT-GGGGTTAAGTCA-TTTTTATCAAACAAGATTAGAAGATTTTGT
FD564064       --> TCATTTTGAGGTTAAGTCAGTTTTTATCAAACAAGATTAGAA........
EV526976       --> TCATTTTGAGGTT.....................................
FD962764       --> TCATTTTGAGGTTAAGTCAGTTTTT.........................
FD962902       --> TCATTTTGAGGTTAAGTCAGTTTTT.........................
FD987370       --> TCATTTTGAGGTTAAGTCAGTTTTTATCAAACAAGATTAGAAGATTTTGT
EX894856       --> TCATTTTGAGGTTA....................................

               651    -    701
UN22393        --> CTTGAAACTTTGATGTATGTTTTTAGAATCATTGTTTACACTATGTGGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY943912       <-- ..................................................
FD951728       <-- CTTGAAACTTTGATGTATGTTTTTAGAATCATTGTTTACACTATGTGGTA
FD983441       <-- CTTG..............................................
FD968283       <-- ..................................................
FD554718       <-- CTTGAAACTTTGATGTATGTTTTTAGAATCATTGTTTACACTATGTGGTA
FD529505       <-- CTTGAAACTTTGATGTATGTTTTTAGAATCATTGTTTACACT........
FD937569       --> ..................................................
EY948159       --> ..................................................
FD955696       --> CTTGAAACTTTGATGTATGTTTTTAGAATCATTGTTTACACTATGTGGTA
FD564064       --> ..................................................
EV526976       --> ..................................................
FD962764       --> ..................................................
FD962902       --> ..................................................
FD987370       --> CTTG..............................................
EX894856       --> ..................................................

               701    -    751
UN22393        --> ATAAATGGCCAGGCTCGATCTGGAATTTGATGTGCC....
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY943912       <-- ........................................
FD951728       <-- ATAAATGGCCAGGCTCGATCTGGAATTTGAcg........
FD983441       <-- ........................................
FD968283       <-- ........................................
FD554718       <-- ATATATGGCCAGGCTCGATCTGGAATTTGATGTGCC....
FD529505       <-- ........................................
FD937569       --> ........................................
EY948159       --> ........................................
FD955696       --> ATAAATGGCCAGGCTCGATCTGGAATTTGAcgaaaaaaaa
FD564064       --> ........................................
EV526976       --> ........................................
FD962764       --> ........................................
FD962902       --> ........................................
FD987370       --> ........................................
EX894856       --> ........................................