1      -     51
UN22439        --> CCAACTATTCATTTGCATATAAGTTATCTTTAATATAATAATTGAAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551797       <-- ...............................AATATAATAAT-GAAGAAG
FD570545       <-- ..................................................
EV566808       <-- ..................................................
EY913710       <-- ..................................................
EY937890       <-- ..................................................
FD569446       <-- ..................................................
FD573657       --> CCAACTATTCATTTGCATATAAGTTATCTTTAATATAATAATTGAAGAAG
EV546832       --> ..............GCATATAAGTTATCTTTAATATAATAATTGAAGAAG
EV571854       --> ..............GCATATAAGTTATCTTTAATATAATAATTGAAGAAG
FD961310       --> ..............GCATATAAGTTATCTTTAATATAATAATTGAAGAAG
EY934131       --> ...............................AATATAATAATTGAAGAAG
FD960515       --> ..................................................

               51     -    101
UN22439        --> GAAGACTTAAAAGTTGGTGTAAATAAGCACGAAAGAAATAAATGATGGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551797       <-- GAAGACTTAAAAGTTGGTGTAAATAAGCACGAAAGAAATAAATGATGGCG
FD570545       <-- ..................................................
EV566808       <-- ..................................................
EY913710       <-- ..................................................
EY937890       <-- ..................................................
FD569446       <-- ..................................................
FD573657       --> GAAGACTTAAAAGTTGGTGTAAATAAGCACGAATAAAATAAATGATGGCC
EV546832       --> GAAGACTTAAAAGTTGGTGTAAATAAGCACGAAAGAAATAAATGATGGCC
EV571854       --> GAAGACTTAAAAGTTGGTGTAAATAAGCACGAA-GAAATAAATGATGGCC
FD961310       --> GAAGACTTAAAAGTTGGTGTAAATAAGCACGAAAGAAATAAATGATGGCC
EY934131       --> GAAGACTTAAAAGTTGGTGTAAATAAGCACGAATAAAATAAATGATGGCC
FD960515       --> ..........................GCACGAAAGAAATAAATGATGGCC

               101    -    151
UN22439        --> TTACACCCGCATAATTTACATAAGTCGCAATGGAGAATAGAGTAAGAGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551797       <-- TTACACCCGCATAATTTACATAAGTCGCAATGGAGAATAGAGTAAGAGGG
FD570545       <-- ...CACCCGCATAATTTACATAAGTCGCAATGGAGAATAGAGTAAGAGGG
EV566808       <-- .......CGCATAATTTACATAAGTCGCAATGGAGAATAGAGTAAGAGGG
EY913710       <-- .................ACATAAGTCGCAATGGAGAATAGAGTAAGAGGG
EY937890       <-- .................................AGAATAGAGTAAGAGGG
FD569446       <-- ..................................................
FD573657       --> TTACACCCGCATAATTTACATAAGTCGCAATGGAGAATAGAGTAAGAGGG
EV546832       --> TTACACCCGCATAATTTACATAAGTCGCAATGGAGAATAGAGTAAGAGGG
EV571854       --> TTACACCCGCATAATTTACATAAGTCGCAATGGAGAATAGAGTAAGAGGG
FD961310       --> TTACACCCGCATAATTTACATAAGTCGCAATGGAGAATAGAGTAAGAGGG
EY934131       --> TTACACCCGCATAATTTACATAAGTCGCAATGGAAAATAGAGTAAGAGGG
FD960515       --> TTACACCCGCATAATTTACATAAGTCGCAATGGAGAATAGAGTAAGAGAG

               151    -    201
UN22439        --> AAGAGCTGTGATTCTACCACCACACCTCCAAAACCTATAAGAAGTATTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551797       <-- AAGAGCTGTGATTCTACCACCACACCTCCAAAACCTATAAGAAGTATTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570545       <-- AAGAGCTGTGATTCTACCACCACAC-TCCAAAACCTATAAGAAGTATTTC  Raphanus sativus cv Early Scarlet Globe
EV566808       <-- AAGAGCTATGATTCTACCACCACACCTCCAAAACCTATAAGAAGTATTTC  Raphanus raphanistrum subsp. landra
EY913710       <-- AAGAGCTGTGATTCTACCACCACACCTCCAAAACCTATAAGAAGTATTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY937890       <-- AAGAGCTGTGATTCTACCACCACACCTCCAAAAC-TATAAGAAGTATTTC  Raphanus sativus cv Early Scarlet Globe
FD569446       <-- ......................................AAGAAGTATTTC  Raphanus sativus cv Early Scarlet Globe
FD573657       --> AAGAGCTGTGATTCTACCACCACACCTCCAAAACCTATAAGAAGTATTTC  Raphanus sativus cv Early Scarlet Globe
EV546832       --> AAGAGCTGTGATTCTACCACCACACCTCCAAAACCTATAAGAAGTATTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571854       --> AAGAGCTATGATTCTACCACCACACCTCCAAAACCTATAAGAAGTATTTC  Raphanus raphanistrum subsp. landra
FD961310       --> AAGAGCTATGATTCTACCACCACACCTCCAAAACCTATAAGAAGTATTTC  Raphanus raphanistrum subsp. maritimus
EY934131       --> AAGAGCTGTGATTCTACCACCACACCTCCAAAACCTATAAGAAGTATTTC  Raphanus sativus cv Early Scarlet Globe
FD960515       --> AAGAGCTATGATTCTACCACCACACCTCCAAAACCTATAAGAAGTATTTC  Raphanus raphanistrum subsp. maritimus

               201    -    251
UN22439        --> ATTCTTTCGTCTCTCCTCATTGCATTATACACTGCTTGAACCTGTTCGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551797       <-- ATTCTTTCGTCTCTCCTCATTGCATTATACACTGCTTGAACCTGTTCGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570545       <-- ATTCTTTCGTCTCTTCTCATTGCATTATACACTGCTTGAACCTGTTCGCT  Raphanus sativus cv Early Scarlet Globe
EV566808       <-- ATTCTTTCGTCTCTCCTCATTGCATTATACACTGCTTGAACCTGTTCGCT  Raphanus raphanistrum subsp. landra
EY913710       <-- ATTCTTTCGTCTCTCCTCATTGCATTATACACTGCTTGAACCTGTTCGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY937890       <-- ATTCTTTCGTCTCTTCTCATTGCATTATACACTGCTTGAACCTGTTCGCT  Raphanus sativus cv Early Scarlet Globe
FD569446       <-- ATTCTTTCGTCTCTTCTCATTGCATTATACACTGCTTGAAC-TGTTCGCT  Raphanus sativus cv Early Scarlet Globe
FD573657       --> ATTCTTTCGTCTCTTCTCATTGCATTATACACTGCTTGAACCTGTTCGCT  Raphanus sativus cv Early Scarlet Globe
EV546832       --> ATTCTTTCGTCTCTCCTCATTGCATTATACACTGCTTGAACCTGTTCGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571854       --> ATTCTTTCGTCTCTCCTCATTGCATTATACACTGCTTGAACCTGTTCGCT  Raphanus raphanistrum subsp. landra
FD961310       --> ATTCTTTCGTCTCTCCTCATTGCATTATACACTGCTTGAACCTGTTCGCT  Raphanus raphanistrum subsp. maritimus
EY934131       --> ATTCTTTCGTCTCTTCTCATTGCATTATACACTGCTTGAACCTGTTCGCT  Raphanus sativus cv Early Scarlet Globe
FD960515       --> ATTCTTTCGTCTCTCCTCATTGCATTATACACTGCTTGAACCTGTTCGCT  Raphanus raphanistrum subsp. maritimus

               251    -    301
UN22439        --> AGAGACAACTCGGATAGGGCCAATGTTCACCGATACATATTTGCCTTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551797       <-- AGAGACAACTCGGATAGGGCCAATGTTCACCGATACATATTTGCCTTTGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570545       <-- AGAGACAACTCGGATAGGGCCAATATTCACCGATACATATTTGCCTTTGC  Raphanus sativus cv Early Scarlet Globe
EV566808       <-- AGAGACAACTCGGATAGGGCCAATGTTCACCGATACATATTTGCCTTTGC  Raphanus raphanistrum subsp. landra
EY913710       <-- AGAGACAACTCGGATAGGGCCAATGTTCACCGATACATATTTGCCTTTGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY937890       <-- AGAGACAACTCGGATAGGGCCAATATTCACCGATACATATTTGCCTTTGC  Raphanus sativus cv Early Scarlet Globe
FD569446       <-- AGAGACAACTCGGATAGGGCCAATATTCACCGATACATATTTGCCTTTGC  Raphanus sativus cv Early Scarlet Globe
FD573657       --> AGAGACAACTCGGATAGGGCCAATATTCACCGATACATATTTGCCTTTGC  Raphanus sativus cv Early Scarlet Globe
EV546832       --> AGAGACAACTCGGATAGGGCCAATGTTCACCGATACATATTTGCCTTTGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571854       --> AGAGACAACTCGGATAGGGCCAATGTTCACCGATACATATTTGCCTTTGC  Raphanus raphanistrum subsp. landra
FD961310       --> AGAGACAACTCGGATAGGGCCAATGTTCACCGATACATATTTGCCTTTGC  Raphanus raphanistrum subsp. maritimus
EY934131       --> AGAGACAACTCGGATAGGGCCAATATTCACCGATACATATTTGCCTTTGC  Raphanus sativus cv Early Scarlet Globe
FD960515       --> AGAGACAACTCGGATAGGGCCAATGTTCACCGATACATATTTGCCTTTGC  Raphanus raphanistrum subsp. maritimus

               301    -    351
UN22439        --> TTGATAATGTCTGCTTTACACAATCCTCAGGAATTTGGCGTTGAATAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551797       <-- TTGATAATGTCTGCTTTACACAATCCTCAGGAATTTGGCGTAGAATAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570545       <-- TTGATAAGGTCTGCTTTACACAATCCTCTGGAATATGGCGTTGAATAACA  Raphanus sativus cv Early Scarlet Globe
EV566808       <-- TTGATAATGTCTGCTTTACACAATCCTCAGGAATTTGGCGTTGAATAACA  Raphanus raphanistrum subsp. landra
EY913710       <-- TTGATAATGTCTGCTTTACACAATCCTCAGGAATTTGGCGTAGAATAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY937890       <-- TTGATAAGGTCTGCTTTACACAATCCTCTGGAATATGGCGTTGAATAACA  Raphanus sativus cv Early Scarlet Globe
FD569446       <-- TTGATAAGGTCTGCTTTACACAATCCTCTGGAATATGGCGTTGAATAACA  Raphanus sativus cv Early Scarlet Globe
FD573657       --> TTGATAAGGTCTGCTTTACACAATCCTCTGGAATATGGCGTTGAATAACA  Raphanus sativus cv Early Scarlet Globe
EV546832       --> TTGATAATGTCTGCTTTACACAATCCTCAGGAATTTGGCGTAAAATAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571854       --> TTGATAATGTCTGCTTTACACAATCCTCAGGAATTTGGCGTTGAATAACA  Raphanus raphanistrum subsp. landra
FD961310       --> TTGATAATGTCTGCTTTACACAATCCTCAGGAATTTGGCGTTGAATAACA  Raphanus raphanistrum subsp. maritimus
EY934131       --> TTGATAAGGTCTGCTTTACACAATCCTCTGGAATATGGCGTTGAATAACA  Raphanus sativus cv Early Scarlet Globe
FD960515       --> TTGATAATGTCTGCTTTACACAATCCTCAGGAATTTGGCGTTGAATAACA  Raphanus raphanistrum subsp. maritimus

               351    -    401
UN22439        --> GATTCAACAGCAAGGACCATAGCATGAACAAAGTCATCTCCACCAGTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551797       <-- GATTCAACAGCAAGGACCATAGCATGAACAAAGTCATCTCCACCAGTCCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570545       <-- GATTCAACAGCAAGGACCATAGCGTGAACAAAGTCATCTCCACCGGTTCC  Raphanus sativus cv Early Scarlet Globe
EV566808       <-- GATTCAACAGCAAGGACCATAGCATGAACAAAGTCATCTCCACCAGTCCC  Raphanus raphanistrum subsp. landra
EY913710       <-- GATTCAACAGCAAGGACCATAGCATGAACAAAGTCATCTCCACCAGTCCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY937890       <-- GATTCAACAGCAAGGACCATAGCGTGAACAAAGTCATCTCCACCGGTTCC  Raphanus sativus cv Early Scarlet Globe
FD569446       <-- GATTCAACAGCAAGGACCATAGCGTGAACAAAGTCATCTCCACCGGTTCC  Raphanus sativus cv Early Scarlet Globe
FD573657       --> GATTCAACAGCAAGGACCATAGCGTGAACAAAGTCATCTCCACCGGTTCC  Raphanus sativus cv Early Scarlet Globe
EV546832       --> GATTCAACAGCAAGGACCATAGCATGAACAAAGTCATCTCCACCAGTCCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571854       --> GATTCAACAGCAAGGACCATAGCATGAACAAAGTCATCTCCACCAGTCCC  Raphanus raphanistrum subsp. landra
FD961310       --> GATTCAACAGCAAGGACCATAGCATGAACAAAGTCATCTCCACCAGTCCC  Raphanus raphanistrum subsp. maritimus
EY934131       --> GATTCAACAGCAAGGACCATAGCGTGAACAAAGTCATCTCCACCGGTTCC  Raphanus sativus cv Early Scarlet Globe
FD960515       --> GATTCAACAGCAAGGACCATAGCATGAACAAAGTCATCTCCACCAGTCCC  Raphanus raphanistrum subsp. maritimus

               401    -    451
UN22439        --> TATTGCAGTAAACCCTCTCTCTGTAGGGTATGTATTTACCTTTTGGTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551797       <-- TATTGCAGTAAACCCTCTCTCTGTAGGGTATGTACTTACCTTTTGGTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570545       <-- TATTGCAGTAAACCCTCTCTCTGTAGGGTATGTATTTACCTTTTGGTCAA  Raphanus sativus cv Early Scarlet Globe
EV566808       <-- AATTGCAGTAAACCCTCTCTCTGTAGGGTATGTATTTACCTTTTGGTCAA  Raphanus raphanistrum subsp. landra
EY913710       <-- TATTGCAGTAAACCCTCTCTCTGTAGGGTATGTATTTACCTTTTGGTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY937890       <-- TATTGCAGTAAACCCTCTCTCTGTAGGGTATGTATTTACCTTTTGGTCAA  Raphanus sativus cv Early Scarlet Globe
FD569446       <-- TATTGCAGTAAACCCTCTCTCTGTAGGGTATGTATTTACCTTTTGGTCAA  Raphanus sativus cv Early Scarlet Globe
FD573657       --> TATTGCAGTAAACCCTCTCTCTGTAGGGTATGTATTTACCTTTTGGTCAA  Raphanus sativus cv Early Scarlet Globe
EV546832       --> TATTGCAGTAAACCCTCTCTCTGTAGGGTATGTACTTACCTTTTGGTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571854       --> AATTGCAGTAAACCCTCTCTCTGTAGGGTATGTATTTACCTTTTGGTCAA  Raphanus raphanistrum subsp. landra
FD961310       --> AATT--AGTAAACCCTCTCTCTGTAGGGTATGTATTTACCTTTTGGTCAA  Raphanus raphanistrum subsp. maritimus
EY934131       --> TATTGCAGTAAACCCTCTCTCTGTAGGGTATGTATTTACCTTTTGGTCAA  Raphanus sativus cv Early Scarlet Globe
FD960515       --> AATTGCAGTAAACCCTCTCTCTGTAGGGTATGTATTTACCTTTTGGTCAA  Raphanus raphanistrum subsp. maritimus

               451    -    501
UN22439        --> GTTCAAGCCAATCTTGAGCAGAATCATCAGCGACAGTGCCACCAATAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551797       <-- GTTCAAGCCAATCTTGAGCAGAATCATCAGCGACAGTGCCTCCAATAATG
FD570545       <-- GTTCAAGCCAATCTTGAGCAGAATCATCAGCGACAGTGCCACCAATAATG
EV566808       <-- GTTCAAGCCAATCTTGAGCAGAATCATCAGCGACAGTGCCACCAATAATG
EY913710       <-- GTTCAAGCCAATCTTGAGCAGAATCATCAGCGACAGTGCCTCCAATAATG
EY937890       <-- GTTCAAGCCAATCTTGAGCAGAATCATCAGCGACAGTGCCACCAATAATG
FD569446       <-- GTTCAAGCCAATCTTGAGCAGAATCATCAGCGACAGTGCCACCAATAATG
FD573657       --> GTTCAAGCCAATCTTGAGCAGAATCATCAGCGACAGTGCCACCAATAATG
EV546832       --> GTTCAAGCCAATCTTGAGCAGAATCATCAGCGACAGTGCCTCCAATAATG
EV571854       --> GTTCAAGCCAATCTTGAGCAGAATCATCAGCGACAGTGCCACCAATAATG
FD961310       --> GTTCAAGCCAATCTTGAGCAGAATCATCAGCGACAGTGCCACCAATAATG
EY934131       --> GTTCAAGCCAATCTTGAGCAGAATCATCAGCGACAGTGCCACCAATAATG
FD960515       --> GTTCAAGCCAATCTTGAGCAGAATCATCAGCGACAGTGCCACCAATAATG

               501    -    551
UN22439        --> ACATTAGTAGTCTTCCCAACTCTCCCATCAGTCTTGGACACTTCTGAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551797       <-- ACATTAGTAGTCTTCCCAACTCTCCCATCAGTCTTGGACACTTCTGAAAT
FD570545       <-- ACATTAGTAGTCTTCCCAACTCTCCCATCAGTCTTGGACACTTCTGAAAT
EV566808       <-- ACATTAGTAGTCTTCCCAACTCTCCCATCAGTCTTGGACACTTCTGAAAT
EY913710       <-- ACATTAGTAGTCTTCCCAACTCTCCCATCAGTCTTGGACACATCTGAAAT
EY937890       <-- ACATTAGTAGTCTTCCCAACTCTCCCATCAGTCTTGGACACTTCTGAAAT
FD569446       <-- ACATTAGTAGTCTTCCCAACTCTCCCATCAGTCTTGGACACTTCTGAAAT
FD573657       --> ACATTAGTAGTCTTCCCAACTCTCCCATCAGTCTTGGACACTTCTGAAAT
EV546832       --> ACATTAGTAGTCTTCCCAACTCTCCCATCAGTCTTGGACACTTCTGAAAT
EV571854       --> ACATTAGTAGTCTTCCCAACTCTCCCATCAGTCTTGGACACTTCTGAAAT
FD961310       --> ACATTAGTAGTCTTCCCAACTCTCCCATCAGTCTTGGACACTTCTGAAAT
EY934131       --> ACATTAGTAGTCTTCCCAACTCTCCCATCAGTCTTGGACACTTCTGAAAT
FD960515       --> ACATTAGTAGTCTTCCCAACTCTCCCATCAGTCTTGGACACTTCTGAAAT

               551    -    601
UN22439        --> CGCCTTGAGAACAGCTTCTTGAGGCGGACCTTGCTCCGATTGATCGTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551797       <-- CGCCTTGAGAGCAGCTTCTTGAGGCGGACCTTGCTCCGATTGATCGTTGT
FD570545       <-- CGCCTTGAGAACAGCTTCTTGAGGCGGACCTTGCTCCGATTGATCGTTGT
EV566808       <-- CGCCTTGAGAACAGCTTCTTGAGGCGGACCTTGCTCCGATTGATCGTTGT
EY913710       <-- CGCCTTGAGAACAGCTTCTTGAGGCGGACCTTGCTCCGATTGATCGTTGT
EY937890       <-- CGCCTTGAGAACAGCTTCTTGAGGCGGACCTTGCTCCGATTGATCGTTGT
FD569446       <-- CGCCTTGAGAACAGCTTCTTGAGGCGGACCTTGCTCCGATTGATCGTTGT
FD573657       --> CGCCTTGAGAACAGCTTCTTGAGGCGGACCTTGCTCCGATTGATCGTTGT
EV546832       --> CGCCTTGAGAGCAGCTTCTTGAGGCGGACCTTGCTCCGATTGATCGTTGT
EV571854       --> CGCCTTGAGAACAGCTTCTTGAGGCGGACCTTGCTCCGATTGATCGTTGT
FD961310       --> TGCCTTGAGAACAGCTTCTTGAGGCGGACCTTGCTCCGATTGATCGTTGT
EY934131       --> CGCCTTGAGAACAGCTTCTTGAGGCGGACCTTGCTCCGATTGATCGTTGT
FD960515       --> CGCCTTGAGAACAGCTTCTTGAGGCGGACCTTGCTCCGATTGATCGTTGT

               601    -    651
UN22439        --> GACTGCAATTGAGACGAGGGAGCCGGTCCGGAACTGAGGCGAAACCGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551797       <-- GACTGCAATTCAGACGAGGTAGCCGGTCCGGGACAGAGGCGAAACCACTG
FD570545       <-- GACTGCAATTGAGACGAGGGAGCCGGTCCGGAACTGAGGCGAAACCGCTG
EV566808       <-- GACTGCAATTGAGACGAGGGAGCCGGTCCGGAACTGAGGCGAAACCGCTG
EY913710       <-- GACTGCAATTCAGACGAGGTAGCCGGTCCGGGACAGAGGCGAAACCACTG
EY937890       <-- GACTGCAATTGAGACGAGGGAGCCGGTCCGGAAATGAG............
FD569446       <-- GACTGCAATTGAGACGAGGGAGCCGGTCCGGAACTGAGGCGAAACCGCTG
FD573657       --> GACTGCAATTGAGACGAGGGAGCCGGTCCGGAACTGAGGCGAAACCGCTG
EV546832       --> GACTGCAATTCAGACGA.................................
EV571854       --> GACTGCAATTGAGACGAGGGAGCCGGTCCGGAACTGAGGCGAAACCGCTG
FD961310       --> GACTGCAATTG.......................................
EY934131       --> GACTGCAATTG.......................................
FD960515       --> GACTGCAATTGAGACGAGGGAGCCGGTCCGGAACTGAGGCGAAACCGCTG

               651    -    701
UN22439        --> AAGCTTAGTCTCTTCGCCGCCGGGAACAAACCATGGACCGTAACAGACGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551797       <-- AAACTTAGTCTCTTCGCCGCCGGGAACAAACCATGGACCGTAACAGACGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570545       <-- AAGCTTAGTCTCTTCGCCGCCGGGAACAAACCATGGACCGTAACAGACAC  Raphanus sativus cv Early Scarlet Globe
EV566808       <-- AAGCTTAGTCTCTTCGCCGCCGGGAACAAACCATGGACTGTAACAGACGC  Raphanus raphanistrum subsp. landra
EY913710       <-- AAACTTAGTTTCTTCGCCGCCGGGAACAAACCATGGACCGTAACAGACGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY937890       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD569446       <-- AAGCTTAGTCTCTTCGCCGCCGGGAACAAACCATGGACCGTAACAGACAC  Raphanus sativus cv Early Scarlet Globe
FD573657       --> AAGCTTAGTCTCTTCGCCGCCGGGAACAAACCATGGACCGTAACAGACAC  Raphanus sativus cv Early Scarlet Globe
EV546832       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571854       --> AAGCTTAGTCTCTTCGCCGCCGGGAACAAACCATGGACTGTAACAGACGC  Raphanus raphanistrum subsp. landra
FD961310       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY934131       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD960515       --> AAGCTTAGTCTCTTCGCCGCCGGGAACAAACCATGGACTGTAACAGACGC  Raphanus raphanistrum subsp. maritimus

               701    -    751
UN22439        --> CGGAGAAG---GAGG---GAAGAAGAAGCATCTTCTTCCTGCGGCGGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551797       <-- CGGAGAAG---GAGGAGGGAAGAAGAAGCATCTTCTTCCTGCGGCGGAGG
FD570545       <-- CGGAGAAG---GAGG---GAAGAAGAAGCATCTTCTTCCTGCGGCGGAGG
EV566808       <-- CGGAGAAG---TTGG---GAAGAAGAAGCATCTTCTTCCTGCGGCGGAGG
EY913710       <-- CGGAGAAGAAGGAGG---GAAGAAGAAGCATCTTCTTCCTGCGGCGGAGG
EY937890       <-- ..................................................
FD569446       <-- CGGAGAAG---GAGG---GAAGAAGAAGCATCTTCTTCCTGCGGCGGAGG
FD573657       --> CGGAGAAG---GAGG---GAAGAAGAAGCAT...................
EV546832       --> ..................................................
EV571854       --> CGGAGAAG---TTGG---GAAGAAGAAGCATCTTCTTCCTGCGGCGGAGG
FD961310       --> ..................................................
EY934131       --> ..................................................
FD960515       --> CGGA..............................................

               751    -    801
UN22439        --> TCCGGCGTGATTCCGATAGAAATACGGAGCGCAGAATCGTCTTGCAAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551797       <-- TCCGGCGTGATTCCGATAGAAATACGGAGCGCAGAATCGTCTTGCAAGCC
FD570545       <-- TCCGGCGTGATTCCGATAGAAATACGGAGCGCAGAATCGTCTTGCAAGCC
EV566808       <-- TCCGGCGTGATTCCGATAGAAATACGGAGCGCAGAATCGT-ATGCAAGCC
EY913710       <-- TCCGGCGTGATTCCGATAGAAATACGGAGCGCAGAATCGTCTTGCAAGCC
EY937890       <-- ..................................................
FD569446       <-- TCCGGCGTGATTCCGATAGAAATACGGAGCGCAGAATCGTCTTGCAAGCC
FD573657       --> ..................................................
EV546832       --> ..................................................
EV571854       --> TCCGGCGTGATTCCGATAGAAA............................
FD961310       --> ..................................................
EY934131       --> ..................................................
FD960515       --> ..................................................

               801    -    851
UN22439        --> ATTTTCTCGAGCTTCTCTCTCTGTTTGGAGACCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551797       <-- ATTTTCTCGAGCTTCTCTCTCTGTTTGGAGACCC
FD570545       <-- ATTTTCTCGAGCTTCTCTCTCTGTTTGGAGACCC
EV566808       <-- ATTCTCTCtctctctgtttggagaccc.......
EY913710       <-- ATTTTCTCGAGCTTCTCTCTCTGTTTGGAGACCC
EY937890       <-- ..................................
FD569446       <-- ATTTTCTCGAGCTTCTCTCTCTGTTTGGAGACCC
FD573657       --> ..................................
EV546832       --> ..................................
EV571854       --> ..................................
FD961310       --> ..................................
EY934131       --> ..................................
FD960515       --> ..................................