RadishBase

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Alignment for radish unigene UN22469

               1      -     51
UN22469        --> AGGGAAAGCAACAATAATTGACAAGTCTCTTTCCTTCATCTTTATCTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW738834       <-- ..................................................
FD539477       <-- ..................................................
EX766628       <-- ..................................................
FD959752       <-- ..................................................
FD537441       <-- ..................................................
EY945602       <-- ..................................................
FD977569       <-- ..................................................
FD982507       <-- ..................................................
FD977053       <-- ..................................................
FD983873       <-- ..................................................
FD981896       --> AGGGAAAGCAACAATAATTGACAAGTCTCTTTCCTTCATCTTTATCTCTT
EX762356       --> ...GAAAGCAACAATAATTGACAAGTCTCTTTCCTTCATCTTTATCTCTT
EY950253       --> ..............TAATTGACAAGTCTCTTTCCTTCATCTTTATCTCTT
EW734503       --> ..................................................
FD963443       --> ..................................................
FD972308       --> ..................................................
FD541074       --> ..................................................
EX750337       --> ..................................................
FD543699       --> ..................................................
EY915725       --> ..................................................
FD987915       --> ..................................................
EX755876       --> ..................................................
EY916482       --> ..................................................
FY446208       --> ..................................................
FD981272       --> ..................................................

               51     -    101
UN22469        --> ATCAAGAACATTGAGCTCTGTTCTTCTTCTTCTGACTCTTGGTCTGATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW738834       <-- ..................................................
FD539477       <-- ..................................................
EX766628       <-- ..................................................
FD959752       <-- ..................................................
FD537441       <-- ..................................................
EY945602       <-- ..................................................
FD977569       <-- ..................................................
FD982507       <-- ..................................................
FD977053       <-- ..................................................
FD983873       <-- ..................................................
FD981896       --> ATCAAGAACATTGAGCTCTGTTCTTCTTCTTCTGACTCTTGGTCTGATCT
EX762356       --> ATCAAGAACATTGAGCTCTGTTCTTCTTCTTCTGACTCTTGGTCTGATCT
EY950253       --> ATCAAGAACATTGAGCTCTGTTCTTCTTCTTCTGACTCTTGGTCTGATCT
EW734503       --> .ggAAGAACATTGAGCTCTGTTCTTCTTCTTCTGACTCTTGGTCTGATCT
FD963443       --> .......ggATTGAGCTCTGTTCTTCTTCTTCTGACTCTTGGTCTGATCT
FD972308       --> ..........ggGAGCTCTGTTCTTCTTCTTCTGGCTCTTGGTCTGATCT
FD541074       --> .................ggGTTCTTCTTCTTCTGGCTCTTGGTCTGATCT
EX750337       --> .............................TTCTGACTCTTGGTCTGATCT
FD543699       --> ...........................ggTTCTGACTCTTGGTCTGATCT
EY915725       --> ...............................ggGACTCTTGGTCTGATCT
FD987915       --> ...............................ggGACTCTTGGTCTGATCT
EX755876       --> ..................................................
EY916482       --> ..................................................
FY446208       --> ..................................................
FD981272       --> ..................................................

               101    -    151
UN22469        --> CTTACAAGAAACAGCACAAAAATGGCGTTCGCAGGAACAACAC----AGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW738834       <-- ..................................................
FD539477       <-- ..................................................
EX766628       <-- ..................................................
FD959752       <-- ..................................................
FD537441       <-- ..................................................
EY945602       <-- ..................................................
FD977569       <-- ..................................................
FD982507       <-- ..................................................
FD977053       <-- ..................................................
FD983873       <-- ..................................................
FD981896       --> CTTACAAGAAAGAGCACAAAAATGGCGTTCGCAGGAACAACCC----AGA
EX762356       --> CTTACAAGAAAGAGCACAAAAATGGCGTTCGCAGGAACAACAC----AGA
EY950253       --> CTTACAAGAAACAGCACAAAAATGGCGTTCGCAGGAACAACAC----AGA
EW734503       --> CTTACAAGAAACAGCACAAAAATGGCGTTCGCAGGAACAACAC----AGA
FD963443       --> CTTACAAGAAACAGCACAAAAATGGCGTTCGCAGGAACAACAC----AGA
FD972308       --> CTTACAAGAAACAGCACAAAAATGGCGTTCGCAGGAACAACAC----AGA
FD541074       --> CTTACAAGAAACAGCACAAAAATGGCGTTCGCAGGAACAACAC----AGA
EX750337       --> CTTACAAGAAACAGCACAAAAATGGCGTTCGCAGGAACAACAC----AGA
FD543699       --> CTTACAAGAAAGAGCACAAAAATGGCGTTCGCAGGAACAACAC----AGA
EY915725       --> CTTACAAGAAACAGCACAAAAATGGCGTTCGCAGGAACAACAC----AGA
FD987915       --> CTTACAAGAAAGAGCACAAAAATGGCGTCCGCAGGAACAACAC----AGA
EX755876       --> CTTACAAGAAACAGCACAAAAATGGCGTTCGCAGGAACAACAC----AGA
EY916482       --> ...ggAAGAAACAGCACAAAAATGGCGTTCGCAGGAACAACACGCACAGA
FY446208       --> ........................GCGTTCGCAGGAACA-CAC----AGA
FD981272       --> ..................................................

               151    -    201
UN22469        --> AATGCATGGCCTGTGACAAAACCGTTTATCTCGTCGACAAGTTAACCGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW738834       <-- ..............GACAAAACCGTTTATCTCGTCGACAAGTTAACCGCA
FD539477       <-- .........................TTATCTCGTCGACAAGCTAACCGCA
EX766628       <-- .....................................CAAGCTAACCGCA
FD959752       <-- ..................................................
FD537441       <-- ..................................................
EY945602       <-- ..................................................
FD977569       <-- ..................................................
FD982507       <-- ..................................................
FD977053       <-- ..................................................
FD983873       <-- ..................................................
FD981896       --> AATGCATGGCCTGTGACAAAACCGTTTATCTCGTCGACAAGCTAACCGCA
EX762356       --> AATGCATGGCCTGTGACAAAACCGTTTATCTCGTCGACAAGCTAACCGCA
EY950253       --> AATGCATGGCCTGTGACAAAACCGTTTATCTCGTCGACAAGTTAACCGCA
EW734503       --> AATGCATGGCCTGTGACAAAACCGTTTATCTCGTCGACAAGTTAACCGCA
FD963443       --> AATGCATGGCCTGTGACAAAACCGTTTATCTCGTCGACAAGTTAACCGCA
FD972308       --> AATGCATGGCCTGTGACAAAACCGTTTATCTCGTCGACAAGTTAACCGCA
FD541074       --> AATGCATGGCCTGTGACAAAACCGTTTATCTCGTCGACAAGTTGACCGCA
EX750337       --> AATGCATGGCCTGTGACAAAACCGTTTATCTCGTCGACAAGTTAACCGCA
FD543699       --> AATGCATGGCCTGTGACAAAACCGTTTATCTCGTCGACAAGCTAACCGCA
EY915725       --> AATGCATGGCCTGTGACAAAACCGTTTATCTCGTCGACAAGTTAACCGCA
FD987915       --> AATGCATGGCCTGTGACAAAACCGTTTATCTCGTCGACAAGCTAACCGCA
EX755876       --> AATGCATGGCCTGTGACAAAACCGTTTATCTCGTCGACAAGTTAACCGCA
EY916482       --> AATGCATGGCCTGTGACAAAACCGTTTATCTCGTCGACAAGTTAACCGCA
FY446208       --> AATGCATGGCCTGTGACAAAACCGTTTATCTCGTCGACAAGTTAACCGCA
FD981272       --> ..................................................

               201    -    251
UN22469        --> GATAACCGGGTTTACCACAAAGCTTGTTTCCGTTGTCACCATTGCAAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW738834       <-- GATAACCGGGTCTACCACAAAGCTTGTTTCCGTTGTCACCATTGCAAAGG  Raphanus sativus cv Rat-Tail Radish #3870
FD539477       <-- GATAACCGGGTTTACCATAAAGCCTGTTTCCGTTGTCACCATTGCAAAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766628       <-- GATAACCGGGTTTACCATAAAGCCTGTTTCCGTTGTCACCATTGCAAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD959752       <-- .........................GTTTCCGTTGTCACCATTGCAAAGG  Raphanus raphanistrum subsp. maritimus
FD537441       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945602       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD977569       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982507       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD977053       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983873       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD981896       --> GATAACCGGGTTTACCATAAAGCCTGTTTCCGTTGTCACCATTGCAAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX762356       --> GATAACCGGGTTTACCATAAAGCCTGTTTCCGTTGTCACCATTGCAAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY950253       --> GATAACCGGGTCTACCACAAAGCTTGTTTCCGTTGTCACCATTGCAAAGG  Raphanus sativus cv Rat-Tail Radish #3870
EW734503       --> GATAACCGGGTCTACCACAAAGCTTGTTTCCGTTGTCACCATTGCAAAGG  Raphanus sativus cv Rat-Tail Radish #3870
FD963443       --> GATAACCGGGTCTACCACAAAGCTTGTTTCCGTTGTCACCATTGCAAAGG  Raphanus raphanistrum subsp. maritimus
FD972308       --> GATAACCGGGTTTACCACAAAGCATGTTTCCGTTGTCACCATTGCAAAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541074       --> GATAACTGGGTTTACCACAAAGCATGTTTCCGTTGTCACCATTGCAAAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX750337       --> GATAACCGGGTCTACCACAAAGCTTGTTTCCGTTGTCACCATTGCAAAGG  Raphanus raphanistrum subsp. maritimus
FD543699       --> GATAACCGGGTTTACCATAAAGCCTGTTTCCGTTGTCACCATTGCAAAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY915725       --> GATAACCGGGTCTACCACAAAGCTTGTTTCCGTTGTCACCATTGCAAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD987915       --> GATAACCGGGTTTACCACAAAGCATGTTTCCGTTGTCACCATTGCAAAGG  Raphanus raphanistrum subsp. landra
EX755876       --> GATAACCGGGTTTACCACAAAGCATGTTTCCGTTGTCACCATTGCAAAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY916482       --> GATAACCGGGTCTACCACAAAGCTTGTTTCCGTTGTCACCATTGCAAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY446208       --> GATAACCGGGTCTACCACAAAGCTTGTTTCCGTTGTCACCATTGCAAAGG  Raphanus sativus cv GSK3-1
FD981272       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               251    -    301
UN22469        --> AACTCTCAAGCTTAGCAACTATAACTCTTTTGAGGGAGTTCTCTACTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW738834       <-- AACTCCCAAGCTTAGCAACTATAACTCTTTCGAGGGAGTTCTCTACTGCA  Raphanus sativus cv Rat-Tail Radish #3870
FD539477       <-- AACTCTCAAGCTTAGCAACTATAACTCTTTTGAGGGAGTTCTCTACTGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766628       <-- AACCCTCAAGCTTAGCAACTATAACTCTTTTGAGGGAGTTCTCTACTGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD959752       <-- AACTCTCAAGCTTAGCAACTATAACTCTTTCGAGGGAGTTCTCTACTGCA  Raphanus raphanistrum subsp. maritimus
FD537441       <-- ..............................................TGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945602       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD977569       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982507       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD977053       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983873       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD981896       --> AACTCTCAAGCTTAGCAACTATAACTCTTTTGAGGGAGTTCTTTACTGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX762356       --> AACCCTCAAGCTTAGCAACTATAACTCTTTTGAGGGAGTTCTCTACTGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY950253       --> AACTCTCAAGCTTAGCAACTATAACTCTTTCGAGGGAGTTCTCTACTGCA  Raphanus sativus cv Rat-Tail Radish #3870
EW734503       --> AACTCCCAAGCTTAGCAACTATAACTCTTTCGAGGGAGTTCTCTACTGCA  Raphanus sativus cv Rat-Tail Radish #3870
FD963443       --> AACTCTCAAGCTTAGCAACTATAACTCTTTCGAGGGAGTTCTCTACTGCA  Raphanus raphanistrum subsp. maritimus
FD972308       --> AACTCTCAAGCTTAGCAACTATAACTCATTTGAGGGAGTTCTCTACTGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541074       --> AACTCTCAAGCTTAGCAACTATAACTCATTTGAGGGAGTTCTCTACTGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX750337       --> GACTCTCAAGCTTAGCAACTATAACTCTTTCGAGGGAGTTCTCTACTGCA  Raphanus raphanistrum subsp. maritimus
FD543699       --> AACTCTCAAGCTTAGCAACTATAACTCTTTTGAGGGAGTTCTCTACTGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY915725       --> AACTCTCAAGCTTAGCAACTATAACTCTTTCGAGGGAGTTCTCTACTGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD987915       --> AACTCTCAAGCTTAGCAACTATAACTCATTTGAGGGAGTTCTCTACTGCA  Raphanus raphanistrum subsp. landra
EX755876       --> AACTCTCAAGCTTAGCAACTATAACTCATTTGAGGGAGTTCTCTACTGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY916482       --> AACTCTCAAGCTTAGCAACTATAACTCTTTCGAGGGAGTTCTCTACTGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY446208       --> AACTCTCAAGCTTAGCAACTATAACTCTTTCGAGGGAGTTCTCTACTGCA  Raphanus sativus cv GSK3-1
FD981272       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               301    -    351
UN22469        --> GACCACATTTTGATCAGAACTTCAAGAGAACTGGAAGTCTTGAGAAGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW738834       <-- GACCACATTTTGATCAGAACTTCAAGAGAACTGGAAGTCTTGAGAAGAGC
FD539477       <-- GACCACATTTTGATCAGAACTTCAAGAGAACTGGAAGTCTTGAGAAGAGC
EX766628       <-- GACCACATTTTGATCAGAACTTCAAGAGAACTGGAAGTCTTGAGAAGAGC
FD959752       <-- GACCACATTTTGATCAGAACTTCAAGAGAACTGGAAGTCTTGAGAAGAGC
FD537441       <-- GACCACATTTTGATCAGAACTTCAAGAGAACTGGAAGTCTTGAGAAGAGC
EY945602       <-- ................................GGAAGTCTTGAGAAGAGC
FD977569       <-- ..................................................
FD982507       <-- ..................................................
FD977053       <-- ..................................................
FD983873       <-- ..................................................
FD981896       --> GACCACATTTTGATCAGAACTTCAAGAGAACTGGAAGTCTTGAGAAGAGC
EX762356       --> GACCACATTTTGATCAGAACTTCAAGAGAACTGGAAGTCTTGAGAAGAGC
EY950253       --> GACCACATTTTGATCAGAACTTCAAGAGAACTGGAAGTCTTGAGAAGAGC
EW734503       --> GACCACATTTTGATCAGAACTTCAAGAGAACTGGAAGTCTTGAGAAGAGC
FD963443       --> GACCACATTTTGATCAGAACTTCAAGAGAACTGGAAGTCTTGAGAAGAGC
FD972308       --> GACCACATTTTGATCAGAACTTCAAGAGAACTGGAAGTCTTGAGAAGAGC
FD541074       --> GACCACATTTTGATCAGAACTTCAAGAGAACTGGAAGTCTTGAGAAGAGC
EX750337       --> GACCACATTTTGATCAGAACTTCAAGAGAACTGGAAGTCTTGAGAAGAGC
FD543699       --> GACCACATTTTGATCAGAACTTCAAGAGAACTGGAAGTCTTGAGAAGAGC
EY915725       --> GACCACATTTTGATCAGAACTTCAAGAGAACTGGAAGTCTTGAGAAGAGC
FD987915       --> GACCACATTTTGATCAGAACTTCAAGAGAACTGGAAGTCTTGAGAAGAGC
EX755876       --> GACCACATTTTGATCAGAACTTCAAGAGAACTGGAAGTCTTGAGAAGAGC
EY916482       --> GACCACATTTTGATCAGAACTTCAAGAGAACTGGAAGTCTTGAGAAGAGC
FY446208       --> GACCACATTTTGATCAGAACTTCAAGAGAACTGGAAGTCTTGAGAAGAGC
FD981272       --> ..................................................

               351    -    401
UN22469        --> TTCGAGGGGACACCAAAGATCGGAAAACCGGATAGACCTTTGGAGGGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW738834       <-- TTCGAGGGGACACCAAAGATCGGAAAACCGGACAGACCTTTGGAGGGAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD539477       <-- TTCGAGGGGACACCAAAGATCGGAAAACCGGATAGACCTTTGGAGGGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766628       <-- TTCGAGGGGACACCAAAGATCGGAAAACCGGATAGACCTTTGGAGGGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD959752       <-- TTCGAGGGGACACCAAAGATCGGAAAACCGGACAGACCTTTGGAGGGAGA  Raphanus raphanistrum subsp. maritimus
FD537441       <-- TTGGAGGGGACACCAAAGATCGGAAAACCGGATTGACCTTTGGAGGGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945602       <-- TTCGAGGGGACACCAAAGATCGGAAAACCGGACAGACCTTTGGAGGGAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD977569       <-- ....................................CCTTTGGAGGGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982507       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD977053       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983873       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD981896       --> TTCGAGGGGACACCAAAGATCGGAAAACCGGATAGACCTTTGGAGGGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX762356       --> TTCGAGGGGACACCAAAGATCGGAAAACCGGATAGACCTTTGGAGGGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY950253       --> TTCGAGGGGACACCAAAGATCGGAAAACCGGACAGACCTTTGGAGGGAGA  Raphanus sativus cv Rat-Tail Radish #3870
EW734503       --> TTCGAGGGGACACCAAAGATCGGAAAACCGGACAGACCTTTGGAGGGAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD963443       --> TTCGAGGGGACACCAAAGATCGGAAAACCGGACAGACCTTTGGAGGGAGA  Raphanus raphanistrum subsp. maritimus
FD972308       --> TTCGAGGGGACACCAAAGATCGGAAAACCGGATAGACCTTTGGAGGGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541074       --> TTCGAGGGGACACCAAAGATCGGAAAACCGGATAGACCTTTGGAGGGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX750337       --> TTCGAGGGGACACCAAAGATCGGAAAACCGGACAGACCTTTGGAGGGAGA  Raphanus raphanistrum subsp. maritimus
FD543699       --> TTCGAGGGGACACCAAAGATCGGAAAACCGGATAGACCTTTGGAGGGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY915725       --> TTCGAGGGGACACCAAAGATCGGAAAACCGGACGGACCTTTGGAGGGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD987915       --> TTCGAGGGGACACCAAAGATCTGAAAACCGGATAGACCTTTGGAGGGAGA  Raphanus raphanistrum subsp. landra
EX755876       --> TTCGAGGGGACACCAAAGAACGGAAAACCGGATAGACCTTTGGAGGGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY916482       --> TTCGAGGGGACACCAAAGATCGGAAAACCGGACAGACCTTTGGAGGGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY446208       --> TTCGAGGGGACACCAAAGATCGGAAAACCGGACAGACCTTTGGAGGGAGA  Raphanus sativus cv GSK3-1
FD981272       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               401    -    451
UN22469        --> GAGACCAGCTGGTACCAAAGTGTCTAATATGTTTGGTGGAACACGAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW738834       <-- GAGACCAGCTGGTACCAAAGTGTCTAATATGTTTGGTGGAACACGAGAAA
FD539477       <-- GAGACCAGCTGGTACCAAAGTGTTTAATATGTTTGGTGGAACACGAGAAA
EX766628       <-- GAGACCAGCTGGTACCAAAGTGTTTAATATGTTTGGTGGAACACGAGAAA
FD959752       <-- GAGACCAGCTGGTACCAAAGTGTTTAATATGTTTGGTGGAACACGAGAAA
FD537441       <-- GAGACCAGCTGGTACCAAAGTGTCTAATATGTTTGGTGGAACACGAGAAA
EY945602       <-- GAGACCAGCTGGTACCAAAGTGTCTAATATGTTTGGTGGAACACGAGAAA
FD977569       <-- GAGACCAGCTGGTACCAAAGTGTCTAATATGTTTGGTGGAACACGAGAAA
FD982507       <-- ..........................ATATGTTTGGTGGAACACGAGAAA
FD977053       <-- ..................................................
FD983873       <-- ..................................................
FD981896       --> GAGACCAGCTGGTACCAAAGTGTCTAATATGTTTGGTGGAACACGAGAAA
EX762356       --> GAGACCAGCTGGTACCAAAGTGTCTAATATGTTTGGTGGAACACGAGAAA
EY950253       --> GAGACCAGCTGGTACCAAAGTGTCTAATATGTTTGGTGGAACACGAGAAA
EW734503       --> GAGACCAGCTGGTACCAAAGTGTCTAATATGTTTGGTGGAACACGAGAAA
FD963443       --> GAGACCAGCTGGTACCAAAGTGTCTAATATGTTTGGTGGAACACGAGAAA
FD972308       --> GAGACCAGCTGGTACCAAAGTGTCTAATATGTTTGGTGGAACACGAGAAA
FD541074       --> GAGACCAGCTGGTACCAAAGTGTCTAATATGTTTGGTGGAACACGAGAAA
EX750337       --> GAGACCAGCTGGTACCAAAGTGTCTAATATGTTTGGTGGAACACGAGAAA
FD543699       --> GAGACCAGCTGGTACCAAAGTGTCTAATATGTTTGGTGGAACACGAGAAA
EY915725       --> GAGACCAGCTGGTACCAAAGTGTCTAATATGTTTGGTGGAACACGAGAAA
FD987915       --> GAGACCAGCTGGTACCAAAGTGTCTAATATGTTTGGTGGAACACGAGAAA
EX755876       --> GAGACCAGCTGGTACCAAAGTGTCTAATATGTTTGGTGGAACACGAGAAA
EY916482       --> GAGACCAGCTGGTACCAAAGTGTCTAATATGTTTGGTGGAACACGAGAAA
FY446208       --> GAGACCAGCTGGTACCAAAGTGTCTAATATGTTTGGTGGAACACGAGAAA
FD981272       --> ..................................................

               451    -    501
UN22469        --> AATGCGTTGGTT-GTGACAAAACCGTGTATCCAATT-GAGAAGGTGTCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW738834       <-- AATTCGTTGGTT-GTGACAAAACCGTGTATCCAATT-GAGAAGGTGTCGG
FD539477       <-- AATGCGTTGGTT-GTGACAAAACCGTGTATCCAATT-GAGAAGGTGTCGG
EX766628       <-- AATGCGTTGGTT-GTGACAAAACCGTGTATCCAATT-GAGAAGGTGTCGG
FD959752       <-- AATGCGTTGGTT-GTGACAAAACCGTGTATCCAATT-GAGAAGGTGTCGG
FD537441       <-- AATGCGTTGGTT-GTGACAAAACCGTGTATCCAATT-GAGAAGGTGTCGG
EY945602       <-- AATGCGTTGGTT-GTGACAAAACCGTGTATCCAATT-GAGAAGGTGTCGG
FD977569       <-- AATGCGTTGGTT-GTGACAAAACCGTGTATCCAATT-GAGAAGGTGTCGG
FD982507       <-- AATGCGTTGGTT-GTGACAAAACCGTGTATCCAATT-GAGAAGGTGTCGG
FD977053       <-- ................................................GG
FD983873       <-- ..................................................
FD981896       --> AATGCGTTGGTT-GTGACAAAACCGTGTATCCAATT-GAGAAGGTGTCGG
EX762356       --> AATGCGTTGGTT-GTGACAAAACCGTGTATCCAATT-GAGAAGGTGTCGG
EY950253       --> AATGCGTTGGTT-GTGACAAAACCGTGTATCCAATT-GAGAAGGTGTCGG
EW734503       --> AATTCGTTGGTT-GTGACAAAACCGTGTATCCAATT-GAGAAGGTGTCGG
FD963443       --> AATGCGTTGGTT-GTGACAAAACCGTGTATCCAATT-GAGAAGGTGTCGG
FD972308       --> AATGCGTTGGTT-GTGACAAAACCGTGTATCCAATT-GAGAAGGTGTCGG
FD541074       --> AATGCGTTGGTT-GTGACAAAACCGTGTATCCAATT-GAGAAGGTGTCGG
EX750337       --> AATGCGTTGGTTTGTGACAAAACCGTGTATCCAATTTGAGAAGGTGTCGG
FD543699       --> AATGCGTTGGTT-GTGACAAAACCGTGTATCCAATT-GAGAAGGTGTCGG
EY915725       --> AATGCGTTGGTT-GTGACAAAACCGTGTATCCAATT-GAGAAGGTGTCGG
FD987915       --> AATGCGTTGGTT-GTGACAAAACCGTGTATCCAATT-GAGAAGGTGTCGG
EX755876       --> AATGCGTTGGTT-GTGACAAAACCGTGTATCCAATT-GAGAAGGTGTCGG
EY916482       --> AATGCGTTGGTT-GTGACAAAACCGTGTATCCAATT-GAGAAGGTGTCGG
FY446208       --> AATGCGTTGGTT-GTGACAAAACCGTGTATCCAATT-GAGAAGGTGTCGG
FD981272       --> ................................................GG

               501    -    551
UN22469        --> TGAATGGGACATTGTACCACAAGAGCTGCTTCAAGTGTACACATGGTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW738834       <-- TGAACGGGACATTGTACCACAAGAGCTGCTTCAAGTGTACACATGGAGGA  Raphanus sativus cv Rat-Tail Radish #3870
FD539477       <-- TGAATGGGACATTGTACCACAAGAGCTGCTTCAAGTGTACACATGGTGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766628       <-- TGAATGGGACATTGTACCACAAGAGCTGCTTCAAGTGTACACATGGTGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD959752       <-- TGAACGGGACATTGTACCACAAGAGCTGCTTCAAGTGTACACATGGAGGA  Raphanus raphanistrum subsp. maritimus
FD537441       <-- TGAATGGGACATTGTACCACAAGAGCTGCTTCAAGTGTACACATGGTGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945602       <-- TGAACGGGACATTGTACCACAAGAGCTGCTTCAAGTGTACACATGGAGGA  Raphanus sativus cv Rat-Tail Radish #3870
FD977569       <-- TGAATGGGACATTGTACCACAAGAGCTGCTTCAAGTGTACACATGGTGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982507       <-- TGAATGGGACATTGTACCACAAGAGCTGCTTCAAGTGTACACATGGTGGA  Raphanus raphanistrum subsp. landra
FD977053       <-- TGAACGGGACATTGTACCACGAGAGCTGCTTCAAGTGTACACATGGAGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983873       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD981896       --> TGAATGGGACATTGTACCACAAGAGCTGCTTCAAGTGTACACATGGTGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX762356       --> TGAATGGGACATTGTACCACAAGAGCTGCTTCAAGTGTACACATGGTGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY950253       --> TGAACGGGACATTGTACCACAAGAGCTGCTTCAAGTGTACACATGGAGGA  Raphanus sativus cv Rat-Tail Radish #3870
EW734503       --> TGAACGGGACATTGTACCACAAGAGCTGCTTCAAGTGTACACATGGAGGA  Raphanus sativus cv Rat-Tail Radish #3870
FD963443       --> TGAACGGGACATTGTACCACAAGAGCTGCTTCAAGTGTACACATGGAGGA  Raphanus raphanistrum subsp. maritimus
FD972308       --> TGAATGGGACATTGTACCACAAGAGCTGCTTCAAGTGTACACATGGTGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541074       --> TGAATGGGACATTGTACCACAAGAGCTGCTTCAAGTGTACACATGGTGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX750337       --> TGAACGGGACATTGTACCACAAGAGCTGCTTCAAGTGTACACATGGAGGA  Raphanus raphanistrum subsp. maritimus
FD543699       --> TGAATGGGACATTGTACCACAAGAGCTGCTTCAAGTGTACACATGGTGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY915725       --> TGAACGGGACATTGTACCACAAGAGCTGCTTCAAGTGTACACATGGAGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD987915       --> TGAATGGGACATTGTACCACAAGAGCTGCTTCAAGTGTACACATGGTGGA  Raphanus raphanistrum subsp. landra
EX755876       --> TGAATGGGACATTGTACCACAAGAGCTGCTTCAAGTGTACACATGGTGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY916482       --> TGAACGGGACATTGTACCACAAGAGCTGCTTCAAGTGTACACATGGAGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY446208       --> TGAACGGGACATTGTACCACAAGAGCTGCTTCAAGTGTACACATGGAGGA  Raphanus sativus cv GSK3-1
FD981272       --> TGAACGGGACATTGTACCACGAGAGCTGCTTCAAGTGTACACATGGAGGA  Raphanus raphanistrum subsp. raphanistrum (NY)

               551    -    601
UN22469        --> TGCACGATAAGTCCTTCGAATTACATAGCTCACGAGGGGAAGCTTTATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW738834       <-- TGCACGATAAGTCCTTCGAATTACATAGCTCACGAGGGGAAGCTTTATTG
FD539477       <-- TGCACGATAAGTCCTTCGAATTACATAGCTCACGAGGGGAAGCTTTATTG
EX766628       <-- TGCACGATAAGTCCTTCGAATTTCATAGCTCACGAGGGGAAGCTTTATTG
FD959752       <-- TGCACGATAAGTCCTTCGAATTACATAGCTCACGAGGGGAAGCTTTATTG
FD537441       <-- TGCACGATAAGTCCTTTGAATTACATAGCTCACGAGGGGAAGCTTTATTG
EY945602       <-- TGCACGATAAGTCCTTCGAATTACATAGCTCACGAGGGGAAGCTTTATTG
FD977569       <-- TGCACGATAAGTCCTTGGAATTACATAGCTCACGAGGGGAAGCTTTATTG
FD982507       <-- TGCACGATAAGTCCTTCGAATTACATAGCTCACGAGGGGAAGCTTTATTG
FD977053       <-- TGCACGATAAGTCCTTCGAATTACATAGCTCACGAGGGGAAGCTTTATTG
FD983873       <-- ..................................................
FD981896       --> TGCACGATAAGTCCTTCGAATTACATAGCTCACGAGGGGAAGCTTTATTG
EX762356       --> TGCACGATAAGTCCTTCGAATTTCATAGCTCACGAGGGGAAGCTTTATTG
EY950253       --> TGCACGATAAGTCCTTCGAATTACATAGCTCA..................
EW734503       --> TGCACGATAAGTCCTTCGAATTACATAGCTCACGAGGGGAAGCTTTATTG
FD963443       --> TGCACGATAAGTCCTTCGAATTACATAGCTCACGAGGGGAAGCTTTATTG
FD972308       --> TGCACGATAAGTCCTTCGAATTACATAGCTCACGAGGGGAAGCTTTATTG
FD541074       --> TGCACGATAAGTCCTTCGAATTACATAGCTCACGAGGGGAAGCTTTATTG
EX750337       --> TGCACGATAAGTCCTTCGAATTACATAGCTCACGAGGGGAAGCTTTATTG
FD543699       --> TGCACGATAAGTCCTTCGAATTACATAGCTCACGAGGGGAAGCTTTATTG
EY915725       --> TGCACGATAAGTCCTTCGAATTACATAGCTCACGAGGGGAAGCTTTATTG
FD987915       --> TGCACGATAAGTCCTTCGAATTACATAGCTCACGAGGGGAAGCTTTATTG
EX755876       --> TGCACGATAAGTCCTTCGAATTACATAGCTCACGAGGGGAAGCTTTATTG
EY916482       --> TGCACGATAAGTCCTTCGAATTACATAGCTCACGAGGGGAAGCTTTATTG
FY446208       --> TGCACGATAAGTCCTTCGAATTACATAGCTCACGAGGGGAAGCTTTATTG
FD981272       --> TGCACGATAAGTCCTTCGAATTACATAGCTCACGAGGGGAAGCTTTATTG

               601    -    651
UN22469        --> CAAGCATCATCATATTCAGCTTATCAAGGAGAAAGGAAACTTGAGCCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW738834       <-- CAAGCATCATCATATTCAGCTTATCGAGGAGAAAGGAAACTTGAGCCAGC
FD539477       <-- CAAGCATCATCATATTCAGCTTATCAAGGAGAAAGGAAGCTTGAGCCAGC
EX766628       <-- CAAGCATCATCATATTCAGCTTATCAAGGAGAAAGGAAACTTGAGCCAGC
FD959752       <-- CAAGCATCATCATATTCAGCTTATCAAGGAGAAAGGAAACTTGAGCCAGC
FD537441       <-- CAAGCATCATCATATTCAGCTTATCAAGGAGAAAGGAAACTTGAGCCAGC
EY945602       <-- CAAGCATCATCATATTCAGCTTATCAAGGAGAAAGGAAACTTGAGCCAGC
FD977569       <-- CAAGCATCATCATATTCAGCTTATCAAGGAGAAAGGAAACTTGAGCCAGC
FD982507       <-- CAAGCATCATCATATTCAGCTTATCGAGGAGAAAGGAAACTTGAGCCAGC
FD977053       <-- CAAGCATCATCATATTCAGCTTATCAAGGAGAAAGGAAACTTGAGCCAGC
FD983873       <-- ..................................................
FD981896       --> CAAGCATCATCATATTCAGCTTATCAAGGAGAAAGGAAACTTGAGCCAGC
EX762356       --> CAAGCATCATCATATTCAGCTTATCAAGGAGA..................
EY950253       --> ..................................................
EW734503       --> CAAGCATCATCATATTCAGCTTATCGAGGAGAAAGGAAACTTGAGCCAGC
FD963443       --> CAAGCATCATCATATTCAGCTTATCAAGGAGAAAGGAAACTTGAGCCAGC
FD972308       --> CAATCATCATCATATTCAGCTTATCAAGGAGAAAGGAAACTTGAGCCAGC
FD541074       --> CAAGCATCATCATATTCAGCTTATCAAGGAGAAAGGAAACTTGAGCCAGC
EX750337       --> CAAGCATCATCATATTCAGCTTATCAAGGAGAAAGGAAACTTGAGCCAGC
FD543699       --> CAAGCATCATCATATTCAGCTTATCAAGGAGAAAGGAAGCTTGAGCCAGC
EY915725       --> CAAGCATCATCATATTCAGCTTATCAAGGAGAAAGGAAACTTGAGCCAGC
FD987915       --> CAAGCATCATCATATTCAGCTTATCGAGGAGAAAGGAAACTTGAGCCAGC
EX755876       --> CAAGCATCATCATATTCAGCTTATCAAGGAGAAAGGAAACTTGAGCCAGC
EY916482       --> CAAGCGTCATCATATTCAGCTTATCAAGGAGAAAGGAAACTTGAGCCAGC
FY446208       --> CAAGCATCATCATATTCAGCTTATCAAGGAGAAAGGAAACTTGAGCCAGC
FD981272       --> CAAGCATCATCATATTCAGCTTATCAAGGAGAAAGGAAACTTGAGCCAGC

               651    -    701
UN22469        --> TCGAAGGAGGAGATAATACCGCTAAGGACAAAGTGGACGCTGCTTGAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW738834       <-- TCGAAGGAGGAGATAATACCGCTAAGGACAAAGTGGACGCTGCTTGA---  Raphanus sativus cv Rat-Tail Radish #3870
FD539477       <-- TCGAAGGAGGAGATAATACCGCAAAGGACAAAGTGGACGCTGCTTGAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766628       <-- TCGAAGGAGGAGATAATACCGCAAAGGACAAAGTGGACGCTGCTTGAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD959752       <-- TCGAAGGAGGAGATAATACCGCTAAGGACAAAGTGGACGCTGCTTGA---  Raphanus raphanistrum subsp. maritimus
FD537441       <-- TCGAAGGAGGAGATAATACCGCAAAGGACAAAGTGG..............  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945602       <-- TCGAAGGAGGAGATAATACCGCTAAGGACAAAGTGGACGCTGCTTGA---  Raphanus sativus cv Rat-Tail Radish #3870
FD977569       <-- TCGAAGGAGGAGATAATACCGCAAAGGACAAAGTGGACGCTGCCTGAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982507       <-- TCGAAGGAGGAGATAATACCGCAAAGGACAAAGTGGACGCTGCTTGAAAA  Raphanus raphanistrum subsp. landra
FD977053       <-- TCGAAGGAGGAGATAATACCGCTAAGGACAAAGTGGACGCTGCTTGA---  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983873       <-- .............................................aAAAA  Raphanus raphanistrum subsp. landra
FD981896       --> TCGAAGGAGGAGATAATACCGCAAAGGACAAAGTGGACGCTGCCTGAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX762356       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY950253       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW734503       --> TCGAAGGAGGAGATAATACCGCTAAGGACAAAGTGGACGCTGCTTGAAAA  Raphanus sativus cv Rat-Tail Radish #3870
FD963443       --> TCGAAGGAGGAGATAATACCGCTAAGGACAAAGTGGACGCTGCTTGAAAA  Raphanus raphanistrum subsp. maritimus
FD972308       --> TCGAAGGAGGAGATAATACCGCAAAGGACAAAGTGGACGCTGCTTGAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541074       --> TCGAAGGAGGAGATAATACCGCAAAGGACAAAGTGGACGCTGCTTG....  Raphanus raphanistrum subsp. raphanistrum (MS)
EX750337       --> TCGAAAGAGGAGATAATACCGCTAAAGACAAAGTGGACGCTGCTTTAAAG  Raphanus raphanistrum subsp. maritimus
FD543699       --> TC................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY915725       --> TCGAAGGAGGAGATAATACCGCTAAGGACAAAGTGGACTCTGCTTGAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD987915       --> TCGAAGGAGGAGATAATACCGCAAAGGACAAAGTGGACGCTGCTTGAAAA  Raphanus raphanistrum subsp. landra
EX755876       --> TCGAAag...........................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY916482       --> TCGAAGGAGGAGATAATACCGCTAAGGACAAAGTGGACGCTGCTTGAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY446208       --> TCGAAGGAGGAGATAATACCGCTAAGGACAAAGTGGACGCTGCTTGAAAA  Raphanus sativus cv GSK3-1
FD981272       --> TCGAAGGAGGAGATAATACCGCTAAGGACAAAGTGGACGCTGCTTGAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)

               701    -    751
UN22469        --> A-AAA--GAA-AAAGAGAAACAGTTCATTTTGACCCTTGAAGAACCAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW738834       <-- --AAA--GAA-AAAGAGAAACAGTTCATTTTGACCCTTGAAGAACCAATA  Raphanus sativus cv Rat-Tail Radish #3870
FD539477       <-- AGAAA--AAAGAAAAAAAAACAGTTCATTTTGACCCTTGAAGAACCGATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766628       <-- A-AAAATGAA-AAAAAAAAACAGTTCATTTTGACCCTTGAAGAACCAATA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD959752       <-- --AAA--GAA-AAAGAGAAACAGTTCATTTTGACCCTTGAAGAACCAATA  Raphanus raphanistrum subsp. maritimus
FD537441       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945602       <-- --AAA--GAA-AAAGAGAAACAGTTCATTTTGACCCTTGAAGAACCAATA  Raphanus sativus cv Rat-Tail Radish #3870
FD977569       <-- A-AAAATGAA-AAAAAAAAACAGTTCATTTTGACCCTTGAAGAACCAATA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982507       <-- A-AAAATGAA-AAAAA-AAACAGTTCATTTTGACCCTTGAAGAACCAATA  Raphanus raphanistrum subsp. landra
FD977053       <-- --AAA--GAA-AAAGAGAAACAGTTCATTTTGACCCTTGAAGAACCAATA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983873       <-- A-AAT--GAA-AAA-AAAAACAGTTCATTTTGACCCTTGAAGAACCAATA  Raphanus raphanistrum subsp. landra
FD981896       --> A-AAA-TGAA-AAA....................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX762356       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY950253       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW734503       --> -------G-A-AAAGAGAAACAGTTCATTTTGACCCTTGAAGAACCAATA  Raphanus sativus cv Rat-Tail Radish #3870
FD963443       --> -------G-A-AAAGAGAAACAGTTCATTTTGACCCTTGAAGAACCAATA  Raphanus raphanistrum subsp. maritimus
FD972308       --> A.................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541074       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX750337       --> A-AAA--GA.........................................  Raphanus raphanistrum subsp. maritimus
FD543699       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY915725       --> -------GAA-AAAGAGAAACAGTTCATTTTGACCCTTGAAGAACCAATA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD987915       --> A-AAA-TGAA-AAA-A-AAACAGTTCATTTTGACCCTTGAAGAACCAATA  Raphanus raphanistrum subsp. landra
EX755876       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY916482       --> -------GAA-AAAGAGAAACAGTTCATTTTGACCCTTGAAGAACCAATA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY446208       --> -------GAA-AAAGAGAAACAGTTCATTTTGACCCTTGAAGAACCAATA  Raphanus sativus cv GSK3-1
FD981272       --> -------GAA-AAAGAGAAACAGTTCATTTTGACCCTTGAAGAACCAATA  Raphanus raphanistrum subsp. raphanistrum (NY)

               751    -    801
UN22469        --> GTGTCACTACCCTCGATCGATCCATAACATATAAATTGGTTTTGTTCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW738834       <-- GTGTCACTACCCTCGATCGATCCATAACATATAAATTGGTTTTGTTCTTC  Raphanus sativus cv Rat-Tail Radish #3870
FD539477       <-- GTGTCACCACCCTCGATCGATCCATAATATAAAAATTGGTTTTGTTCTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766628       <-- GTGTCACTACCCTCGATCGATCCATAATATAAAAATTGGTTTTGTTCTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD959752       <-- GTGTCACTACCCTCGATCGATCCATAACATATAAATTGGTTTTGTTCTTC  Raphanus raphanistrum subsp. maritimus
FD537441       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945602       <-- GTGTCACTACCCTCGATCGATCCATAACATATAAATTGGTTTTGTTCTTC  Raphanus sativus cv Rat-Tail Radish #3870
FD977569       <-- GTGTCACTACCCTCGATCGATCCATACTATAAAAATTGGTTTTGTTCTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982507       <-- GTGTCACTACCCTCGATCGATCCATAATATAAAAATTGGTTTTGTTCTTC  Raphanus raphanistrum subsp. landra
FD977053       <-- GTGTCACTACCCTCGATCGATCCATAACATATAAATTGGTTTTGTTCTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983873       <-- GTGTCACTACCCTCGATCGATCCATAATATAAAAATTGGTTTTGTTCTTC  Raphanus raphanistrum subsp. landra
FD981896       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX762356       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY950253       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW734503       --> GTGTCACTACCCTCGATCGATCCATAACATATAAATTGGTTTTGTTCTTC  Raphanus sativus cv Rat-Tail Radish #3870
FD963443       --> GTGTCACTACCCTCGATCGATCCATAACATATAAATTGGTTT-GTTCTTC  Raphanus raphanistrum subsp. maritimus
FD972308       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541074       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX750337       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD543699       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY915725       --> GTGTCACTACCCTCGATCGATCCATAACATATAAATTGGTTTTGT-CTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD987915       --> GTGTCACTACCCTCGATCGATCCATAATATA-AAATTGGTTTTGTTCT-C  Raphanus raphanistrum subsp. landra
EX755876       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY916482       --> GTGTCACTACCCTCGATCGATCCATAACATATAAATTGGTTTTGTTCTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY446208       --> GTGTCACTACCCTCGATCGATCCATAACATATAAATTGGTTTTGTTCTTC  Raphanus sativus cv GSK3-1
FD981272       --> GTGTCACTACCCTCGATCGATCCATAACATATAAATTGGTTTTGTTCTTC  Raphanus raphanistrum subsp. raphanistrum (NY)

               801    -    851
UN22469        --> TTAAGTTTATGTTCTTTCTTTTGGGATCTTTGTTGTCTCCTATGGTGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW738834       <-- TTAAGTTTATGTTCTTTCTTTTGGGATCTTTGTTGTCTCCTATGGTGATC
FD539477       <-- TTAAGTTTATGTTCTTTCTTTTGGGATCTTTATTGTCTCCTAGGGTGATC
EX766628       <-- TTAAGTTTATGTTCTTTCTTTTGGGATCTTTATTGTCTCCTAGGGTGATC
FD959752       <-- TTAAGTTTATGTTCTTTCTTTTGGGATCTTTGTTGTCTCCTATGGTGATC
FD537441       <-- ..................................................
EY945602       <-- TTAAGTTTATGTTCTTTCTTTTGGGATCTTTGTTGTCTCCTATGGTGATC
FD977569       <-- Tc................................................
FD982507       <-- TTAAGTTTATGTTCTTTCTTTTGGGATCTTTGTTGTCTCCTATGGTGATC
FD977053       <-- TTAAGTTTATGTTCTTTCTTTTGGGATCTTTGTTGTCTCCc.........
FD983873       <-- TTAAGTTTATGTTCTTTCTTTTGGGATCTTTGTTGTCTCCTATGGTGATC
FD981896       --> ..................................................
EX762356       --> ..................................................
EY950253       --> ..................................................
EW734503       --> TTAAGTT-ATGTTCTTTCTTTggg..........................
FD963443       --> TTAAGTT-ATG-TCTTTCTTT-GGGATCTTTGT-GTCTCCTATGGTGATC
FD972308       --> ..................................................
FD541074       --> ..................................................
EX750337       --> ..................................................
FD543699       --> ..................................................
EY915725       --> TTAAGTT-ATGTTCTTTCTTT-GGGATCTTTGT-GTCTCCTATGGTGATC
FD987915       --> TTAAGTT-ATGTTCT...................................
EX755876       --> ..................................................
EY916482       --> TTAAGTT-ATGTTCTTTCTTTTGGGATCTTTGTTGTCTCCTATGGTGATC
FY446208       --> TTAAGTTTATGTTCTTTCTTTTGGGATCTTTGTTGTCTCCTATGGTGATC
FD981272       --> TTAAGTTTATGTTCTTTCTTTTGGGATCTTTGTTGTCTCCc.........

               851    -    901
UN22469        --> TTGTTCACTCTTCGTTGGGTTTCTTGAGATGAAACAAAGAAACATATAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW738834       <-- TTGTTCACTCTTCGTTGGCTTTCTTGAGATGAAACAAAGAAACATATAAA
FD539477       <-- TTGTTCACTCTTCGTTGGGTTTCTTGAGATGAAACAAAGAAACAAATAAA
EX766628       <-- TTGTTCACTCTTCGTTGGGTTCCTTGAGATGAAACAAAGAAACAAATAAA
FD959752       <-- TTGTTCACTCTTCGTTGGGTTTCTTGAGATGAAACAAAGAAACATATAAA
FD537441       <-- ..................................................
EY945602       <-- TTGTTCACTCTTCGTTGGCTTTCTTGAGATGAAACAAAGAAACATATAA.
FD977569       <-- ..................................................
FD982507       <-- TTGTTCACTCTTCGTTGGGTTTCTTGAGATGAAACAAAGAAACATATAAA
FD977053       <-- ..................................................
FD983873       <-- TTGTTCACTCTTCGTTGGGTTTCTTGAGATGAAACAAAGAAACATATAAA
FD981896       --> ..................................................
EX762356       --> ..................................................
EY950253       --> ..................................................
EW734503       --> ..................................................
FD963443       --> T-GTTCACTCTTCGTTGGGTT-CTTGAGATGAAAaa..............
FD972308       --> ..................................................
FD541074       --> ..................................................
EX750337       --> ..................................................
FD543699       --> ..................................................
EY915725       --> T-GTTCACTCTTCGTTGG-CTTCTTGAGATGAA.................
FD987915       --> ..................................................
EX755876       --> ..................................................
EY916482       --> TTGTTCACTCTTCGTTGGGTTTCTTGAGA.....................
FY446208       --> TTGTTCACTCTTCGTTGGCTTTCTTGAGA.....................
FD981272       --> ..................................................

               901    -    951
UN22469        --> TAATGGATATTTGCTTATGAGAATATACGTATCACGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW738834       <-- TAATGGATATTTGCTTATGAG..................
FD539477       <-- TAATGGATATT-GCTTATGAGAATATACGTATCACGTTC
EX766628       <-- TAATG..................................
FD959752       <-- TAATGGgt...............................
FD537441       <-- .......................................
EY945602       <-- .......................................
FD977569       <-- .......................................
FD982507       <-- TAATGGATATTTGCTTATGAGAATATACGTATCACGTTC
FD977053       <-- .......................................
FD983873       <-- TAATGGATATTTGCTTATGAGAATATACGTATCACGTTC
FD981896       --> .......................................
EX762356       --> .......................................
EY950253       --> .......................................
EW734503       --> .......................................
FD963443       --> .......................................
FD972308       --> .......................................
FD541074       --> .......................................
EX750337       --> .......................................
FD543699       --> .......................................
EY915725       --> .......................................
FD987915       --> .......................................
EX755876       --> .......................................
EY916482       --> .......................................
FY446208       --> .......................................
FD981272       --> .......................................