RadishBase

| | | |
Alignment for radish unigene UN22522

               1      -     51
UN22522        --> GGATTAAGAAAAACAAAAAAAAA-CTACAAAAAA-TATAAATTTTTCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943824       <-- ..................................................
FD944361       <-- ..................................................
FD943695       <-- ..................................................
FD538863       <-- ..................................................
EX774467       <-- ..................................................
EY896485       <-- ..................................................
FD553899       <-- ..................................................
FD967204       <-- ..................................................
FD959991       <-- ..................................................
FD974884       <-- ..................................................
EX761368       <-- ..................................................
EX754401       --> GGATTAAGAAAAACAAAAAAAAAACTATAAAAAA-TATAAATTTTTCTTT
EX757905       --> GGATTAAGAAAAACAAAAAAAAA-CTACAAAAAA-TATAAATTTTTCTTT
FD970962       --> GGATTAAGAAAAACAAAAAAAAAACTACAAAAAAATATAAATTTTTCTTT
FD972683       --> GGATTAAGAAAAACAAAAAAAAA-CTACAAAAAAATATAAATTTTTCTTT
EX757598       --> .GATTAAGAAAAACAAAAAAAA--CTACAAAAAA-TATAAATTTTTCTTT
EY931851       --> ...ggAAGAAAAACAAAAAAAAAACTACAAAAAA-TATAAATTTTTCTTT
FD542917       --> ...ggAAGAAAAACAAAAAAAAA-CTACAAAAAAATATAAATTTTTCTTT
FD947975       --> ...ggAAGAAAAACAAAAAAAA--CTACAAAAA--TATAAAATTTTCTTT
FY428414       --> ..................................................
EX770231       --> ..................................................
FD557877       --> ..................................................
EV552055       --> ..................................................
EY901099       --> ..................................................
FD947823       --> ..................................................
FD941194       --> ..................................................
FY430462       --> ..................................................
EV552400       --> ..................................................

               51     -    101
UN22522        --> TTAATTTTAATAAAACAAAAAAA-TAAAACAAAAATAAAACAATGAGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943824       <-- ..................................................
FD944361       <-- ..................................................
FD943695       <-- ..................................................
FD538863       <-- ..................................................
EX774467       <-- ..................................................
EY896485       <-- ..................................................
FD553899       <-- ..................................................
FD967204       <-- ..................................................
FD959991       <-- ..................................................
FD974884       <-- ..................................................
EX761368       <-- ..................................................
EX754401       --> TTAATTTTAATAAAACAAAAAAAATAAAACAAAAATAAAACAATGAGACG
EX757905       --> TTAATTTTAATAAAACAAAAAAAATAAAACAAAAATAAAACAATGAGATG
FD970962       --> TTAATTTTAATAAAACAAAAAAA-TAAAACAAAAATAAAACAATGAGATG
FD972683       --> TTAATTTTAATAAAACAAAAAAA-TAAAACAAAAATAAAACAATGAGATG
EX757598       --> TTAATTTTAATAAAACAAAAAAA-TAAAACAAAAATAAAACAATGAGATG
EY931851       --> TTAATTTTAATAAAACAAAAAA--TAAAACAAAAATAAAACAATGAGATG
FD542917       --> TTAATTTTAATAAAACAAAAAAA-TAAAACAAAAATAAAACAATGAGATG
FD947975       --> TTAATTTTAATAAAACAAAAAAA-TAAAACAAAAATAAAACAATGAGATG
FY428414       --> ..........atAAACAAAAAAA-TAAAACAAAAATAAAACAATGAGATG
EX770231       --> ..................................................
FD557877       --> ..................................................
EV552055       --> ..................................................
EY901099       --> ..................................................
FD947823       --> ..................................................
FD941194       --> ..................................................
FY430462       --> ..................................................
EV552400       --> ..................................................

               101    -    151
UN22522        --> CACAAACGTGTCCATTTTATTAGCCTTGGTGATGGTGTTTGTTACACCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943824       <-- ..................................................
FD944361       <-- ..................................................
FD943695       <-- ..................................................
FD538863       <-- ..................................................
EX774467       <-- ..................................................
EY896485       <-- ..................................................
FD553899       <-- ..................................................
FD967204       <-- ..................................................
FD959991       <-- ..................................................
FD974884       <-- ..................................................
EX761368       <-- ..................................................
EX754401       --> CACAAACGTGTCCATTTTGTTAGCCTTGGTGATGGTGTTTGTTACACCGA
EX757905       --> CACAAACGTGTCCATTTTATTAGCCTTGGTGATGGTGTTTGTTACACCGA
FD970962       --> CACAAACGTGTCCATTTTATTAGCCTTGGTGATGGTGTTTGTTACACCGA
FD972683       --> CACAAACGTGTCCATTTTATTAGCCTTGGTGATGGTGTTTGTTACACCGA
EX757598       --> CACAAACGTGTCCATTTTATTAGCCTTGGTGATGGTGTTTGTTACACCGA
EY931851       --> CACAAACGTGTCCATTTTATTAGCCTTGGTGATGGTGTTTGTTACACCGA
FD542917       --> CACAAACGTGTCCATTTTATTAGCCTTGGTGATGGTGTTTGTTACACCGA
FD947975       --> CACAAACGTGTCCATATTATTAGCCTTGGTGATGGTGTTTGTCACGCAGA
FY428414       --> CACAAACGTGTCCATATTATTAGCCTTCGTGATGGTGTTTGTTACACCGA
EX770231       --> ..................................................
FD557877       --> ..................................................
EV552055       --> ..................................................
EY901099       --> ..................................................
FD947823       --> ..................................................
FD941194       --> ..................................................
FY430462       --> ..................................................
EV552400       --> ..................................................

               151    -    201
UN22522        --> TGGTGTTGGCAGATGATGTAACACCAATTCCAGAGGCCAAAGTTCAAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943824       <-- ..................................................
FD944361       <-- ..................................................
FD943695       <-- ..................................................
FD538863       <-- ..................................................
EX774467       <-- ..................................................
EY896485       <-- ..................................................
FD553899       <-- ..................................................
FD967204       <-- ..................................................
FD959991       <-- ..................................................
FD974884       <-- ..................................................
EX761368       <-- ..................................................
EX754401       --> TGGTGTTGGCAGATGATGTAACACCAATTCCAGAGGCCAAAGTTCAAGTG
EX757905       --> TGGTGTTGGCAGATGATGTAACACCAATTCCAGAGGCCAAAGTTCAAGTG
FD970962       --> TGGTGTTGGCAGATGATGTAACACCAATTCCAGAGGCCAAAGTTCAAGTG
FD972683       --> TGGTGTTGGCAGATGATGTAACACCAATTCCAGAGGCCAAAGTTCAAGTG
EX757598       --> TGGTGTTGGCAGATGATGTAACACCAATTCCAGAGGCCAAAGTTCAAGTG
EY931851       --> TGGTGTTGGCAGATGATGTAACACCAATTCCAGAGGCCAAAGTTCAAGTG
FD542917       --> TGGTGTTGGCAGATGATGTAACACCAATTCCAGAGGCCAAAGTTCAAGTG
FD947975       --> TGGTGTTGGCAGATGATGTAACACCAATTCCAGAGGCCAAAGTTCAAGTG
FY428414       --> TGGTGTTGGCAGATGATGTAACACCAATTCCAGAGGCCAAAGTTCAAGTG
EX770231       --> ..................................................
FD557877       --> ..................................................
EV552055       --> ..................................................
EY901099       --> ..................................................
FD947823       --> ..................................................
FD941194       --> ..................................................
FY430462       --> ..................................................
EV552400       --> ..................................................

               201    -    251
UN22522        --> GAGCAGTGGTTCAAGACCAACGTAGCTCCTTTGCCTTCGCGTAAAGGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943824       <-- ..................................................
FD944361       <-- ..................................................
FD943695       <-- ..................................................
FD538863       <-- ..................................................
EX774467       <-- ..................................................
EY896485       <-- ..................................................
FD553899       <-- ..................................................
FD967204       <-- ..................................................
FD959991       <-- ..................................................
FD974884       <-- ..................................................
EX761368       <-- ..................................................
EX754401       --> GAGCAGTGGTTCAAGACCAACGTAGCTCCTTTGCCTTCGCGTAAAGGTCT
EX757905       --> GAGCAGTGGTTCAAGACCAACGTAGCTCCTTTGCCTTCGCGTAAAGGTCT
FD970962       --> GAGCAGTGGTTCAAGACCAACGTAGCTCCTTTGCCTTCGCGTAAAGGTCT
FD972683       --> GAGCAGTGGTTCAAGACCAACGTAGCTCCTTTGCCTTCGCGTAAAGGTCT
EX757598       --> GAGCAGTGGTTCAAGACCAACGTAGCTCCTTTGCCTTCGCGTAAAGGTCT
EY931851       --> GAGCAGTGGTTCAAGACCAACGTAGCTCCTTTGCCATCGCGTAAAGGTCT
FD542917       --> GAGCAGTGGTTCAAGACCAACGTAGCTCCTTTGCCTTCGCGTAAAGGTCT
FD947975       --> GATCAGTGGTCCAAGACCAACGTAGCTCCTTTGCCTTCGCGTAAAGGTCT
FY428414       --> GAGCAGTGGTTCAAGACCAACGTAGCTCCTTTGCCTTCGCGTAAAGGTCT
EX770231       --> ..................................................
FD557877       --> ..................................................
EV552055       --> ..................................................
EY901099       --> ..................................................
FD947823       --> ..................................................
FD941194       --> ..................................................
FY430462       --> ..................................................
EV552400       --> ..................................................

               251    -    301
UN22522        --> AGATCCTGCTCTCGTAGCTGCTGAGGCTGAGCCACGTACCATCACCGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943824       <-- ..................................................
FD944361       <-- ..................................................
FD943695       <-- ..................................................
FD538863       <-- ..................................................
EX774467       <-- ..................................................
EY896485       <-- ..................................................
FD553899       <-- ..................................................
FD967204       <-- ..................................................
FD959991       <-- ..................................................
FD974884       <-- ..................................................
EX761368       <-- ..................................................
EX754401       --> AGATCCTGCTCTCGTAGCTGCTGAGGCTGAGCCACGTACCATCACCGTGG
EX757905       --> AGATCCTGCTCTCGTAGCTGCTGAGGCTGAGCCACGTACCATCACCGTGG
FD970962       --> AGATCCTGCTCTCGTAGCTGCTGAGGCTGAGCCACGTACCATCACCGTGG
FD972683       --> AGATCCTGCTCTCGTAGCTGCTGAGGCTGAGCCACGTACCATCACCGTGG
EX757598       --> AGATCCTGCTCTCGTAGCTGCTGAGGCTGAGCCACGTACCATCACCGTGG
EY931851       --> AGATCCTGCTCTCGTAGCTGCTGAGGCTGAGCCACGTACCATCACCGTGG
FD542917       --> AGATCCTGCTCTCGTAGCTGCTGAGGCTGAGCCACGTACCATCACCGTGG
FD947975       --> AGATCCTGCTCTCGTAGCTGCTGAGGCTGAGCCACGTACCATCACCGTGG
FY428414       --> AGATCCTGCTCTCGTAGCTGCTGAGGCTGAGCCACGTACCATCACCGTGG
EX770231       --> ..................................................
FD557877       --> ..................................................
EV552055       --> ..................................................
EY901099       --> ..................................................
FD947823       --> ..................................................
FD941194       --> ..................................................
FY430462       --> ..................................................
EV552400       --> ..................................................

               301    -    351
UN22522        --> ATCCAAAGGGAGGTGAATTCAAAACACTAACGGACGCAATAAAGAGCGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943824       <-- ..................................................
FD944361       <-- ..................................................
FD943695       <-- ..................................................
FD538863       <-- ..................................................
EX774467       <-- ..................................................
EY896485       <-- ..................................................
FD553899       <-- ..................................................
FD967204       <-- ..................................................
FD959991       <-- ..................................................
FD974884       <-- ..................................................
EX761368       <-- ..................................................
EX754401       --> ATCCAAAGGGAGGTGAATTCAAAACACTAACGGACGCAATAAAGAGCGTT
EX757905       --> ATCCAAAGGGAGGTGAATTCAAAACACTAACGGACGCAATAAAGAGCGTT
FD970962       --> ATCCAAAGGGAGGTGAATTCAAAACACTAACGGACGCAATAAAGAGCGTT
FD972683       --> ATCCAAAGGGAGGTGAATTCAAAACACTAACGGACGCAATAAAGAGCGTT
EX757598       --> ATCCAAAGGGAGGTGAATTCAAAACACTAACGGACGCAATAAAGAGCGTT
EY931851       --> ATCCAAAGGGAGGTGAATTCAAAACACTAACGGACGCAATAAAGAGCGTT
FD542917       --> ATCCAAAGGGAGGTGAATTCAAAACACTAACGGACGCAATAAAGAGCGTT
FD947975       --> ATCCAAAGGGAGGTGAATTCAAAACACTAACGGACGCAATAAAGAGCGTT
FY428414       --> ATCCAAAGGGAGGTGAATTCAAAACACTAACGGACGCAATAAAGAGCGTT
EX770231       --> ..................................................
FD557877       --> ..................................................
EV552055       --> ..................................................
EY901099       --> ..................................................
FD947823       --> ..................................................
FD941194       --> ..................................................
FY430462       --> ..................................................
EV552400       --> ..................................................

               351    -    401
UN22522        --> CCTGCAGCGAACACAAAGCGTGTGATCATCAAGATAGCCCCTGGCGAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943824       <-- ..................................................
FD944361       <-- ..................................................
FD943695       <-- ..................................................
FD538863       <-- ..................................................
EX774467       <-- ..................................................
EY896485       <-- ..................................................
FD553899       <-- ..................................................
FD967204       <-- ..................................................
FD959991       <-- ..................................................
FD974884       <-- ..................................................
EX761368       <-- ..................................................
EX754401       --> CCTGCAGCGAACACAAAGCGTGTGATCATCAAGATAGCCCCTGGCGAATA
EX757905       --> CCTGCAGCGAACACAAAGCGTGTGATCATCAAGATAGCCCCTGGCGAATA
FD970962       --> CCTGCAGCGAACACAAAGCGTGTGATCATCAAGATAGCCCCTGGCGAATA
FD972683       --> CCTGCAGCGAACACAAAGCGTGCGATCATCAAGATAGCCCCTGGCGAATA
EX757598       --> CCTGCAGCGAACACAAAGCGTGTGATCATCAAGATAGCCCCTGGCGAATA
EY931851       --> CCTGCAGCGAACACAAAGCGTGTGATCATCAAGATAGCCCCTGGCGAATA
FD542917       --> CCTGCAGCGAACACAAAGCGTGTGATCATCAAGATAGCCCCTGGCGAATA
FD947975       --> CCTGCAGCGAACACAAAGCGTGTGATCATCAAGATAGCCCCTGGCGAATA
FY428414       --> CCTGCAGCGAACACAAAGCGTGTGATCATCAAGATAGCCCCTGGCGAATA
EX770231       --> ..................................................
FD557877       --> ..................................................
EV552055       --> ..................................................
EY901099       --> ..................................................
FD947823       --> ..................................................
FD941194       --> ..................................................
FY430462       --> ..................................................
EV552400       --> ..................................................

               401    -    451
UN22522        --> CAGAGAGAAGGTCACCATCGACAGAAACAAACCCTTCATTACATTGATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943824       <-- ..................................................
FD944361       <-- ..................................................
FD943695       <-- ..................................................
FD538863       <-- ..................................................
EX774467       <-- ..................................................
EY896485       <-- ..................................................
FD553899       <-- ..................................................
FD967204       <-- ..................................................
FD959991       <-- ..................................................
FD974884       <-- ..................................................
EX761368       <-- ..................................................
EX754401       --> CAGAGAGAAGGTCACCATCGACAGAAACAAACCCTTCATTACATTGATGG
EX757905       --> CAGAGAGAAGGTCACCATCGACAGAAACAAACCCTTCATTACATTGATGG
FD970962       --> CAGAGAGAAGGTCACCATCGACAGAAACAAACCCTTCATTACATTGATGG
FD972683       --> CAGAGAGAAGGTCACCATCGACAGAAACAAACCCTTCATTACATTGATGG
EX757598       --> CAGAGAGAAGGTCACCATCGACAGAAACAAACCCTTCATTACATTGATGG
EY931851       --> CAGAGAGAAGGTCACCATCGACAGAAACAAACCCTTCATTACATTGATGG
FD542917       --> CAGAGAGAAGGTCACCATCGACAGAAACAAACCCTTCATTACATTGATGG
FD947975       --> CAGAGAGAAGGTCACCATCGACAGAAACAAACCCTTCATTACATTGATGG
FY428414       --> CAGAGAGAAGGTCACCATCGACAGAAACAAACCCTTCATTACATTGATGG
EX770231       --> ..................................................
FD557877       --> ..................................................
EV552055       --> ..................................................
EY901099       --> ..................................................
FD947823       --> ..................................................
FD941194       --> ..................................................
FY430462       --> ..................................................
EV552400       --> ..................................................

               451    -    501
UN22522        --> GAGATCCCAAGGCCATGCCGGTTATTACTTTCGACGGTACTGCCGCAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943824       <-- ..................................................
FD944361       <-- ..................................................
FD943695       <-- ..................................................
FD538863       <-- ..................................................
EX774467       <-- ..................................................
EY896485       <-- ..................................................
FD553899       <-- ..................................................
FD967204       <-- ..................................................
FD959991       <-- ..................................................
FD974884       <-- ..................................................
EX761368       <-- ..................................................
EX754401       --> GAGATCCCAAGGCCATGCCGGTTATTACTTTCGACGGTACTGCCGCAAAG
EX757905       --> GAGATCCCAAGGCCATGCCGGTTATTACTTTCGACGGTACTGCCGCAAAG
FD970962       --> GAGATCCCAAGGCCATGCCGGTTATTACTTTCGACGGTACTGCCGCAAAG
FD972683       --> GAGATCCCAAGGCCATGCCGGTTATTACTTTCGACGGTACTGCCGCAAAG
EX757598       --> GAGATCCCAAGGCCATGCCGGTTATTACTTTCGACGGTACTGCCGCAAAG
EY931851       --> GAGATCCCAAGGCCATGCCGGTTATTACTTTCGACGGTACTGCCGCAAAG
FD542917       --> GAGATCCCAAGGCCATGCCGGTTATTACTTTCGACGGTACTGCCGCAAAG
FD947975       --> GAGATCCCAAGGCCATGCCGGTTATTACTTTCGACGGTACTGCCGCAAAG
FY428414       --> GAGATCCCAAGGCCATGCCGGTTATTACTTTCGACGGTACTGCCGCAAAG
EX770231       --> ..................................................
FD557877       --> ..................................................
EV552055       --> ..................................................
EY901099       --> ..................................................
FD947823       --> ..................................................
FD941194       --> ..................................................
FY430462       --> ..................................................
EV552400       --> ..................................................

               501    -    551
UN22522        --> TTCGGTACCGTAGATAGTGCCACACTCATTATCTTATCCGACTATTTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943824       <-- ..................................................
FD944361       <-- ..................................................
FD943695       <-- ..................................................
FD538863       <-- ..................................................
EX774467       <-- ..................................................
EY896485       <-- ..................................................
FD553899       <-- ..................................................
FD967204       <-- ..................................................
FD959991       <-- ..................................................
FD974884       <-- ..................................................
EX761368       <-- ..................................................
EX754401       --> TTCGGTACCGTAGATAGTGCCACACTCATTATCTTATCCGACTATTTCAT
EX757905       --> TTCGGTACCGTAGATAGTGCCACACTCATTATCTTATCCGACTATTTCAT
FD970962       --> TTCGGTACCGTAGATAGTGCCACACGCATTATCTTATCCGACTATTTCAT
FD972683       --> TTCGGTACCGTAGATAGTGCCACACTCATTATCTTATCCGACTATTTCAT
EX757598       --> TTCGGTACCGTAGATAGTGCCACACTCATTATCTTATCCGACTATTTCAT
EY931851       --> TTTGGTACCGTAGATAGTGCCACACTCATTATCTTATCCGACTATTTCAT
FD542917       --> TTCGGTACCGTAGATAGTGCCACACTCATTATCTTATCCGACTATTTCAT
FD947975       --> TTTGGTACCGTAGATAGTGCCACACTCATTATCTTATCCGACTATTTCAT
FY428414       --> TTTGGTACCGTAGATAGTGCCACACTCATTATCTTATCCGACTATTTCAT
EX770231       --> ..................................................
FD557877       --> ..................................................
EV552055       --> ..................................................
EY901099       --> ..................................................
FD947823       --> ..................................................
FD941194       --> ..................................................
FY430462       --> ..................................................
EV552400       --> ..................................................

               551    -    601
UN22522        --> GGCTGTCAACATCGTCGTTAAGAATACAGCGCCGGCACCGGATGGTAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943824       <-- ..................................................
FD944361       <-- ..................................................
FD943695       <-- ..................................................
FD538863       <-- ..................................................
EX774467       <-- ..................................................
EY896485       <-- ..................................................
FD553899       <-- ..................................................
FD967204       <-- ..................................................
FD959991       <-- ..................................................
FD974884       <-- ..................................................
EX761368       <-- ..................................................
EX754401       --> GGCTGTCAACATCGTCGTTAAGAATACAGCGCCGGCACCGGATGGTAAAG
EX757905       --> GGCTGTCAACATCGTCGTTAAGAATACAACGCCGGCACCGGATGGTAAAG
FD970962       --> GGCTGTCAACATCGTCGTTAAGAATACAGCGCCGGCACCGGATGGTAAAG
FD972683       --> GGCTGTCAACATCGTCGTTAAGAATACAGCGCCGGCACCGGATGGTAAAG
EX757598       --> GGCTGTCAACATCGTCGTTAAGAATACAGCGCCGGCACCGGATGGTAAAG
EY931851       --> GGCTGTCAATATCGTCGTTAAGAATACAGCGCCGGCACCGGATGGTAAAG
FD542917       --> GGCTGTCAACATCGTCGTTAAG-------CGCCGGCACCGGATGGTAAAG
FD947975       --> GGCTGTCAACATCGTCGTTAAGAATACAGCGCCGGCACCGGATGGTAAAG
FY428414       --> GGCTGTCAACATCGTCGTTAAGAATACAGCGCCGGCACCGGATGGTAAAG
EX770231       --> ..................................................
FD557877       --> ..................................................
EV552055       --> ..................................................
EY901099       --> ..................................................
FD947823       --> ..................................................
FD941194       --> ..................................................
FY430462       --> ..................................................
EV552400       --> ..................................................

               601    -    651
UN22522        --> CGAAGGGAGCACAAGCTTTATCTATGAGAATCTCTGGAAACAAGGCTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943824       <-- ..................................................
FD944361       <-- ..................................................
FD943695       <-- ..................................................
FD538863       <-- ..................................................
EX774467       <-- ..................................................
EY896485       <-- ..................................................
FD553899       <-- ..................................................
FD967204       <-- ..................................................
FD959991       <-- ..................................................
FD974884       <-- ..................................................
EX761368       <-- ..................................................
EX754401       --> CGAAGGGAGCACAAGCTTTATCTATGAGAATCTCTAGAAACAAG-CTGCT
EX757905       --> CGAAGGGAGCACAAGCTTTATCTATGAGAATCTCTGGAAACAAGGCTGCT
FD970962       --> CGAAGGGAGCACAAGCTTTATCTATGAGAATCTCTGGA............
FD972683       --> CGAAGGGAGCACAAGCTTTATCTATGAGAATCTCTGGAA...........
EX757598       --> CGAAGGGAGCACAAGCTTTATCTATGAGAATCTCTGGAAACAAG-CTGCT
EY931851       --> CGAAGGGAGCACAAGCTTTATCTATGAGAATCTCTGGA............
FD542917       --> CGAAGGGAGCACAAGCTTTATCTATGAGAATCTCTGGAAACAAGGCTGCT
FD947975       --> CGAAGGGAGCACAAGCTTTATCTATGAGAATCTCTGGAAACAAAGCTGCT
FY428414       --> CGAAGGGAGCACAAGCTTTATCTATGAGAATCTCTGGAAACAAGGCTGCT
EX770231       --> .....GGAGCACAAGCTTTATCTATGAGAATCTCTGGAAACAAGGCTGCT
FD557877       --> ..................................................
EV552055       --> ..................................................
EY901099       --> ..................................................
FD947823       --> ..................................................
FD941194       --> ..................................................
FY430462       --> ..................................................
EV552400       --> ..................................................

               651    -    701
UN22522        --> TTCTACAACTGTAAATTCTACGGATTCCAAGACACAATTTGTGACGATAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943824       <-- ..CTACAACTGTAAATTCTACGGATTCCAAGACACAATTTGTGACGATAC
FD944361       <-- ..................................................
FD943695       <-- ..................................................
FD538863       <-- ..................................................
EX774467       <-- ..................................................
EY896485       <-- ..................................................
FD553899       <-- ..................................................
FD967204       <-- ..................................................
FD959991       <-- ..................................................
FD974884       <-- ..................................................
EX761368       <-- ..................................................
EX754401       --> TTCTACAGCTGTAA-TTCTACGGATTCCAAGACACAATTTGTGACGATAC
EX757905       --> TTCTACAACTGTAAATTCTACGGATTCCAAGACACAATTTGTGACGATAC
FD970962       --> ..................................................
FD972683       --> ..................................................
EX757598       --> TTCTACAACTGTAAATTCTACGAATTCCAAGACACAATTTGTGACGATAC
EY931851       --> ..................................................
FD542917       --> TTCTACAACTGTAAATTCTACGGATTCCAAGACACAATTTGTGACGATAC
FD947975       --> TTCTACAACTGTAAATTCTACGGATTCCAAGACACAATTTGTGACGATAC
FY428414       --> TTCTACAACTGTAAATTCTACGGATTCCAAGACACAATTTGTGACGATAC
EX770231       --> TTCTACAACTGTAAATTCTACGGATTCCAAGACACAATTTGTGACGATAC
FD557877       --> ...........................................gCGATAC
EV552055       --> ..................................................
EY901099       --> ..................................................
FD947823       --> ..................................................
FD941194       --> ..................................................
FY430462       --> ..................................................
EV552400       --> ..................................................

               701    -    751
UN22522        --> CGGAAACCATTTCTTCAAGGATTGTTACGTCGAAGGGACATTCGATTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943824       <-- CGGAAACCATTTCTTCGAGGATTGTTACGTCGAAGGGACATTCGATTTCG
FD944361       <-- ....AACCACTTCTTCAAGGATTGTTACGTCGAAGGGACATTCGATTTCA
FD943695       <-- ...........................CGTCGAAGGGACATTCGATTTCA
FD538863       <-- ..............................CGAAGGGACATTCGATTTCA
EX774467       <-- ..................................................
EY896485       <-- ..................................................
FD553899       <-- ..................................................
FD967204       <-- ..................................................
FD959991       <-- ..................................................
FD974884       <-- ..................................................
EX761368       <-- ..................................................
EX754401       --> CGGAA-CCATTTCTTCAAG-A-TGTTACGTCGAAGG-ACA-TCGATTca.
EX757905       --> CGGAAACCATTTCTTCAAGGATTGTTACGTCGAAGG-ACATT........
FD970962       --> ..................................................
FD972683       --> ..................................................
EX757598       --> CGGAAAC-ATTTCTTCA-GGATTGTTACGTCGAAGG-ACATTCGATTTCA
EY931851       --> ..................................................
FD542917       --> CGGAAACCATTTCTTCAAGGATTGTTACGTCGAAGG-ACATTCGATTTCA
FD947975       --> CGGAAcc...........................................
FY428414       --> CGGAAACCATTTCTTCAAGGACTGTTACGTCGAAGGGACATTCGATTTCA
EX770231       --> CGGAAACCATTTCTTCAAGGATTGTTACGTCGAAGGGACATTCGATTTCA
FD557877       --> CGGAAACCATTTCTTCAAGGATTGTTACGTCGAAGGGACATTCGATTTCA
EV552055       --> ........................gTACGTCGAAGGGACATTCGATTTCA
EY901099       --> ..................................................
FD947823       --> ..................................................
FD941194       --> ..................................................
FY430462       --> ..................................................
EV552400       --> ..................................................

               751    -    801
UN22522        --> TCTTCGGAAGCGGGACCTCTCTTTACTTGGGTACACAATTGCACGTGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943824       <-- TCTTCGGAAGCGGGACCTCTCTTTACT-CGGTACACAATTGCACGTGGTG  Raphanus sativus cv Early Scarlet Globe
FD944361       <-- TCTTCGGAAGCGGGACCTCTCTTTACTTGGGTACACAATTGCACGTGGTG  Raphanus sativus cv Early Scarlet Globe
FD943695       <-- TCTTCGGAAGCGGGACCTCTCTTTACTTGGGTACACAATTGCACGTGGTG  Raphanus sativus cv Early Scarlet Globe
FD538863       <-- TCTTCGGAAGCGGGACCTCTCTTTACTTGGGTACACAATTGCACGTGGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX774467       <-- ...........................TGGGTACACAATTGCACGTGGTG  Raphanus raphanistrum subsp. landra
EY896485       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD553899       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD967204       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD959991       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD974884       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761368       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754401       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757905       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD970962       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972683       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757598       --> TCTTCG-AAGCGGGACt.................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY931851       --> ..................................................  Raphanus sativus var. oleiformis
FD542917       --> TCTTCGGA-GCGGGACCTCTCTTTACTTGGGTACACAATTGCACGTGGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD947975       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY428414       --> TCTTCGGAAGTGGGACCTCTCTTTACTTGGGTACACAATTGCACGTGGTG  Raphanus sativus cv GSK3-1
EX770231       --> TCTTCGGAAGTGGGACCTCTCTTTACTTGGGTACACAATTGCACGTGGTG  Raphanus raphanistrum subsp. landra
FD557877       --> TCCTCGGAAGTGGGACCTCTCTTTACTTGGGTACACAATTGCACGTGGTG  Raphanus raphanistrum subsp. landra
EV552055       --> TCTTCGGAAGTGGGACCTCTCTTTACTTGGGTACACAATTGCACGTGGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901099       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD947823       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD941194       --> ..................................................  Raphanus sativus var. oleiformis
FY430462       --> ..................................................  Raphanus sativus cv GSK3-1
EV552400       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               801    -    851
UN22522        --> GGAGATGGCATTAGAGTGATAACAGCGCATGCGGGAAAGACCGCAGACGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943824       <-- GGAGATGGCATTAGAGTGATAACAGCGCATGCGGGAAAGACCGCAGACGA
FD944361       <-- GGAGATGGCATTAGAGTGATAACAGCGCATGCGGGAAAGACCGCAGACGA
FD943695       <-- GGAGATGGCATTAGAGTGATAACAGCGCATGCGGGAAAGACCGCAGACGA
FD538863       <-- GGAGATGGCATTAGAGTGATAACAGCGCATGCGGGAAAGACCGCAGACGA
EX774467       <-- GGAGATGGCATTAGAGTGATAACAGCGCATGCGGGAAAGACCGCAGACGA
EY896485       <-- .....................................gGACCGCAGACGA
FD553899       <-- ..................................................
FD967204       <-- ..................................................
FD959991       <-- ..................................................
FD974884       <-- ..................................................
EX761368       <-- ..................................................
EX754401       --> ..................................................
EX757905       --> ..................................................
FD970962       --> ..................................................
FD972683       --> ..................................................
EX757598       --> ..................................................
EY931851       --> ..................................................
FD542917       --> GGAGATGGCAT-AGAGTGATA-CAGCGCATGCGGGAA-GA-CGCAGACGA
FD947975       --> ..................................................
FY428414       --> GGAGATGGCATTAGAGTGATAACAGCGCATGCGGGAAAGACCGCAGACGA
EX770231       --> GGAGATGGCATTAGAGTGATAACAGCGCATGCGGGAAAGACCGCAGACGA
FD557877       --> GGAGATGGCATTAGAGTGATAACAGCGCATGCGGGAAAGACCGCAGACGA
EV552055       --> GGAGATGGCATTAGAGTGATAACAGCGCATGCGGGAAAGACCGCAGACGA
EY901099       --> .....................................gGACCGCAGACGA
FD947823       --> ..................................................
FD941194       --> ..................................................
FY430462       --> ..................................................
EV552400       --> ..................................................

               851    -    901
UN22522        --> GAAGACCGGATACTCTTTCGTGCATTGCAAGGTGACTGGAGTTGGTCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943824       <-- GAAGACCGGATACTCTTTCGTGCATTGCAAGGTGACTGGAGTTGGTCAAG
FD944361       <-- GAAGACCGGATACTCTTTCGTGCATTGCAAGGTGACTGGAGTTGGTCAAG
FD943695       <-- GAAGACCGGATACTCTTTCGTGCATTGCAAGGTGACTGGAGTTGGTCAAG
FD538863       <-- GAAGACCGGATACTCTTTCGTGCATTGCAAGGTGACTGGAGTTGGTCAAG
EX774467       <-- GAAGACCGGATACTCTTTCGTGCAGTGCAAGGTGACTGGAGTTGGTCAAG
EY896485       <-- GAAGACCGGATACTCTTTCGTGCATTGCAAGGTGACTGGAGTTGGTCAAG
FD553899       <-- .............TCTTTCGTGCATTGCAAGGTGACTGGAGTTGGTCAAG
FD967204       <-- ..................................................
FD959991       <-- ..................................................
FD974884       <-- ..................................................
EX761368       <-- ..................................................
EX754401       --> ..................................................
EX757905       --> ..................................................
FD970962       --> ..................................................
FD972683       --> ..................................................
EX757598       --> ..................................................
EY931851       --> ..................................................
FD542917       --> GA-GACCG-ATACTCTT-CGTGCAT.........................
FD947975       --> ..................................................
FY428414       --> AAAGACCGGATACTCTTTCGTGCATTGCAAGGTGACTGGAGTTGGTCAAG
EX770231       --> GAAGACCGGATACTCTTTCGTGCAGTGCAAGGTGACTGGAGTTGGTCAAG
FD557877       --> GAAGACCGGATACTCTTTCGTGCATTGCAAGGTGACTGGAGTTGGTCAAG
EV552055       --> GAAGACCGGATACTCTTTCGTGCATTGCAAGGTGACTGGAGTTGGTCAAG
EY901099       --> GAAGACCGGATACTCTTTCGTGCATTGCAAGGTGACTGGAGTTGGTCAAG
FD947823       --> ....aaCGGATACTCTTTCGTGCATTGCAAGGTGACTGGAGTTGGTCAAG
FD941194       --> ..................................................
FY430462       --> ..................................................
EV552400       --> ..................................................

               901    -    951
UN22522        --> GAATCTATTTGGGTAGGGCATGGATGAGCCACCCTAAGGTTGTCTACGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943824       <-- GAATCTATTTGGGTAGGGCATGGATGAGCCACCCTAAGGTTGTTTACGCC
FD944361       <-- GAATCTATTTGGGTAGGGCATGGATGAGCCACCCTAAGGTTGTCTACGCC
FD943695       <-- GAATCTATTTGGGTAGGGCATGGATGAGCCACCCTAAGGTTGTCTACGCC
FD538863       <-- GAATCTATTTGGGTAGGGCATGGATGAGTCACCCTAAGGTTGTCTACGCC
EX774467       <-- GAATCTATTTGGGTAGGGCATGGATGAGCCACCCTAAGGTTGTCTACGCC
EY896485       <-- GAATTTATTTGGGTAGGGCATGGATGAGCCACCCTAAGGTTGTTTACGCC
FD553899       <-- GAATCTATTTGGGTAGGGCATGGATGAGCCACCCTAAGGTTGTCTACGCC
FD967204       <-- ..................................................
FD959991       <-- ..................................................
FD974884       <-- ..................................................
EX761368       <-- ..................................................
EX754401       --> ..................................................
EX757905       --> ..................................................
FD970962       --> ..................................................
FD972683       --> ..................................................
EX757598       --> ..................................................
EY931851       --> ..................................................
FD542917       --> ..................................................
FD947975       --> ..................................................
FY428414       --> GAATCTATTTGGGTAGGGCATGGATGAGCCACCCTAAGGTTGTCTACGCC
EX770231       --> GAATCTATTTGGGTAGGGCATGGATGAGCCACCCTAAGGTTGTCTACGCC
FD557877       --> GAATCTATTTGGGTAGGGCATGGATGAGCCACCCTAAGGTTGTCTACGCC
EV552055       --> GAATCTATTTGGGTAGGGCATGGATGAGCCACCCTAAGGTTGTCTACGCC
EY901099       --> GAATCTATTTGGGTAGGGCATGGATGAGCCACCCTAAGGTTGTCTACGCC
FD947823       --> GAATCTATTTGGGTAGGGCATGGATGAGCCACCCTAAGGTTGTCTACGCC
FD941194       --> ..................................................
FY430462       --> ..................................................
EV552400       --> ..................................................

               951    -   1001
UN22522        --> TACACCGAGATGACCAGCGTAGTCAACCCATCTGGATGGCAAGAAAACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943824       <-- TACACCGAGATGACCAGCGTAGTCAACCCATCTGGATGGCAAGAAAACAA
FD944361       <-- TACACCGAGATGACCAGCGTAGTCAACCCATCTGGATGGCAAGAAAACAA
FD943695       <-- TACACCGAGATGACCAGCGTAGTCAACCCATCTGGATGGCA--AAAACAA
FD538863       <-- TACACCGAGATGACCAGCGTAGTCAACCCATCTGGATGGCAAGAAAACAA
EX774467       <-- TACACCGAGATGACCAGCGTAGTCAACCCATCTGGATGGCAAGAAAACAA
EY896485       <-- TACACCGAGATGACCAGCGTAGTCAACCCATTTGGATGGCAAGAAAACAA
FD553899       <-- TACACCGAGATGACCAGCGTTGTCAACCCATTTGGATGGCAAGAAAACAA
FD967204       <-- .............CCAGCGTAGTCAACCCATCTGGATGGCAAGAAAACAA
FD959991       <-- ..................................................
FD974884       <-- ..................................................
EX761368       <-- ..................................................
EX754401       --> ..................................................
EX757905       --> ..................................................
FD970962       --> ..................................................
FD972683       --> ..................................................
EX757598       --> ..................................................
EY931851       --> ..................................................
FD542917       --> ..................................................
FD947975       --> ..................................................
FY428414       --> TA................................................
EX770231       --> TACACCGAGATGACCAGCGTAGTCAACCCATCTGGATGGCAAGAAAACAA
FD557877       --> TACACCGAGATGACCAGCGTTGTCAACCCATCTGGATGGCAAGAAAACAA
EV552055       --> TACACAGAGATGACCAGCGTAGTCAACCCATCTGGATGGCAAGAAAACAA
EY901099       --> TACACCGAGATGACCAGCGTAGTCAACCCATCTGGATGGCAAGAAAACAA
FD947823       --> TACACCGAGATGACCAGCGTAGTCAACCCATCTGGATGGCAA--AAACAA
FD941194       --> ........................................AAGAAAACAA
FY430462       --> ..................................................
EV552400       --> ..................................................

               1001   -   1051
UN22522        --> GATAGCCGCACATGACAAGACCGTGTTCTATGGAGAGTACAAGTGCGTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943824       <-- GATAGCCGCACATGACAAGACCGTGTTCTATGGAGAGTACAAGTGCGTAG
FD944361       <-- GATAGCCGCACATGACAAGACCGTGTTCTATGGAGAGTACAAGTGCGTAG
FD943695       <-- GATAGCCGCACATGACAAGACCGTGTTCTATGGAGAGTACAAGTGCGTAG
FD538863       <-- GATAGCCGCACATGACAAGACCGTGTTCTATGGAGAGTACAAGTGCGTAG
EX774467       <-- GATAGCCGCACATGACAAGACCGTGTTCTATGGAGAGTACAAGTGCGTAG
EY896485       <-- GATAGCCGCACATGACAAGACCGTGTTTTATGGAGAGTACAAGTGCGTAG
FD553899       <-- GATAGCCGCACATGACAAGACCGTGTTTTATGGAGAGTACAAGTGCGTAG
FD967204       <-- GATAGCCGCACATGACAAGACCGTGTTTTATGGAGAGTACAAGTGCGTAG
FD959991       <-- ...............................GGAGAGTACAAGTGCGTGG
FD974884       <-- ...............................................TAG
EX761368       <-- ..................................................
EX754401       --> ..................................................
EX757905       --> ..................................................
FD970962       --> ..................................................
FD972683       --> ..................................................
EX757598       --> ..................................................
EY931851       --> ..................................................
FD542917       --> ..................................................
FD947975       --> ..................................................
FY428414       --> ..................................................
EX770231       --> GATAGCCGCACATGACAAGACCGTGTTCTATGGAGAGTACAAGTGCGTAG
FD557877       --> GATAGCCGCACATGACAAGACCGTGTTCTATGGAGAGTACAAGTGCGTAG
EV552055       --> GATAGCCGCACATGACAAGACCGTGTTCTATGGAGAGTACAAGTGCGTAG
EY901099       --> GATAGCCGCACATGACAAGACCGTGTTCTATGGAGAGTACAAGTGCGTAG
FD947823       --> GATAGCCGCACATGACAAGACCGTGTTCTATGGAGAGTACAAGTGCGTAG
FD941194       --> GATAGCCGCACATGACAAGACCGTGTTCTATGGAGAGTACAAGTGCGTAG
FY430462       --> ..................................................
EV552400       --> ..................................................

               1051   -   1101
UN22522        --> GAGAAGGAGCACAGACAGACAAGAGAGTTCCATTTACACAAAAGATTGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943824       <-- GAGAAGGAGCACAGACAGACAAGAGAGTTCCATTTACACAAAAGATTGAC
FD944361       <-- GAGAAGGAGCACAGACAGACAAGAGAGTTCCATTTACACAAAAGATTGAC
FD943695       <-- GAGAAGGAGCACAGACAGACAAGAGAGTTCCATTTACACAAAAGATTGAC
FD538863       <-- GAGAAGGAGCACAGACAGACAAGAGAGTTCCATTTACACAAAAGATTGAC
EX774467       <-- GAGAAGGAGCACAGACAGACAAGAGAGTTCCATTTACACAAAAGATTGAC
EY896485       <-- GAGAAGGAGCACAGACAGACAAGAGAGTTCCATTTACACAAAAGATTGAC
FD553899       <-- GAGAAGGAGCACAGACAGACAAGAGAGTTCCATTTACACAAAAGATTGAC
FD967204       <-- GAGAAGGAGCACAGACAGACAAGAGAGTTCCATTTACACAAAAGATTGAC
FD959991       <-- GAGAAGGAGCACAGACAGATAAGAGAGTTCCATTTACACAAAAGATTGAC
FD974884       <-- GAGAAGGAGCACAGACAGACAAGAGAGTTCCATTTACACAAAAGATTGAC
EX761368       <-- ..................................................
EX754401       --> ..................................................
EX757905       --> ..................................................
FD970962       --> ..................................................
FD972683       --> ..................................................
EX757598       --> ..................................................
EY931851       --> ..................................................
FD542917       --> ..................................................
FD947975       --> ..................................................
FY428414       --> ..................................................
EX770231       --> GAGAAGGAGCACAGACAGACAAGAGAGTTCCATTTACACAAAAGATTGAC
FD557877       --> GAGAAGGAGCACAGACAGACAAGAGAGTTCCATTTACACAAAAGATTGAC
EV552055       --> GAGAAGGAGCACAGACAGACAAGAGAGTTCCATTTACACAAAAGATTGAC
EY901099       --> GAGAAGGAGCACAGACAGACAAGAGAGTTCCATTTACACAAAAGATTGAC
FD947823       --> GAGAAGGAGCACAGACAGACAAGAGAGTTCCATTTACACAAAAGATTGAC
FD941194       --> GAGAAGGAGCACAGACAGACAAGAGAGTTCCATTTACACAAAAGATTGAC
FY430462       --> ......................GAGAGTTCCATTTACACAAAAGATTGAC
EV552400       --> ..................................................

               1101   -   1151
UN22522        --> ACTACTGTAGCTAACCGTTTCCTTACCCTCGGCTACATTGAAGGATCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943824       <-- ACTACTGTAGCTAACCGTTTCCTTACCCTCGGCTACATTGAAGGATCCAA
FD944361       <-- ACTACTGTAGCTAACCGTTTCCTTACCCTCGGCTACATTGAAGGATCCAA
FD943695       <-- ACTACTGTAGCTAACCGTTTCCTTACCCTCGGCTACATTGAAGGATCCAA
FD538863       <-- ACTACTGTAGCTAACCGTTTCCTTACCCTCGGCTACATTGAAGGATCCAA
EX774467       <-- ACTACTGTAGCTAACCGTTTCCTTACCCTCGGCTACATTGAAGGATCCAA
EY896485       <-- ACTACTGTAGCTAACCGTTTCCTTACCCTCGGCTACATTGAAGGATCCAA
FD553899       <-- ACTACTGTAGCTAACCGTTTCCTTACCCTCGGCTACATTGAAGGATCCAA
FD967204       <-- ACTACTGTAGCTAACCGTTTCCTTACCCTCGGCTACATTGAAGGATCCAA
FD959991       <-- ACTACTGTAGCTAACCGTTTCCTTACCCTCGGCTACATTGAAGGATCCAA
FD974884       <-- ACTACTGTAGCTAACCGTTTCCTTACCCTCGGCTACATTGAAGGATCCAA
EX761368       <-- ..................................................
EX754401       --> ..................................................
EX757905       --> ..................................................
FD970962       --> ..................................................
FD972683       --> ..................................................
EX757598       --> ..................................................
EY931851       --> ..................................................
FD542917       --> ..................................................
FD947975       --> ..................................................
FY428414       --> ..................................................
EX770231       --> ACTACTGTAGCTAACCGTTTCCTTACCCTCGGCTACATTGAAGGATCCAA
FD557877       --> ACTACTGTAGCTAACCGTTTCCTTACCCTCGGCTACATTGAAGGATCCAA
EV552055       --> ACTACTGTAGCTAACCGTTTCCTTACCCTCGGCTACATTGAAGGATCCAA
EY901099       --> ACTACTGTAGCTAACCGTTTCCTTACCCTCGGCTACATTGAAGGATCCAA
FD947823       --> ACTACTGTAGCTAACCGTTTCCTTACCCTCGGCTACATTGAAGGATCCAA
FD941194       --> ACTACTGTAGCTAACCGTTTCCTTACCCTCGGCTACATTGAAGGATCCAA
FY430462       --> ACTACTGTAGCTAACCGTTTCCTTACCCTCGGCTACATTGAAGGATCCAA
EV552400       --> ..................................................

               1151   -   1201
UN22522        --> GTGGCTTCTCCCACCTCCCGCTGTTGCGGCTTCAATATGAATCTAGTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943824       <-- GTGGCTTCTCCCCCCTCCCGCTGTTGCGGCTTCAATATGAATCTAGTTTA
FD944361       <-- GTGGCTTCTCCCACCTCCCGCTGTTGCGGCTTCAATATGAATCTAGTTTA
FD943695       <-- GTGGCTTCTCCCACCTCCCGCTGTTGCGGCTTCAATATGAATCTAGTTTA
FD538863       <-- GTGGCTTCTCCCACCTCCCGCTGTTGCGGCTTCAATATGAATCTAGTTTA
EX774467       <-- GTGGCTTCTCCCACCTCCCGCTGTTGCGGCTTCAATATGAATCTAGTTTA
EY896485       <-- GTGGCTTCTCCCACCTCCCGCTGTTGCGGCTTCAATATGAATTTAGTTTA
FD553899       <-- GTGGCTTCTCCCACCTCCCGCTGTTGCGGCTTCAATATGAATCTAGTTTA
FD967204       <-- GTGGCTTCTCCCACCTCCCGCTGTTGCGGCTTCAATATGAATCTAGTTTA
FD959991       <-- GTGGCTTCTCCCACCTCCCGCTGTTGCGGCTTCAATATGAATTTAGTTTA
FD974884       <-- GTGGCTTCTCCCACCTCCCGCTGTTGCGGCTTCAATATGAATCTAGTTTA
EX761368       <-- .........CCCACCTCCCGCTGTTGCGGCTTCAATATGAATCTAGTTTA
EX754401       --> ..................................................
EX757905       --> ..................................................
FD970962       --> ..................................................
FD972683       --> ..................................................
EX757598       --> ..................................................
EY931851       --> ..................................................
FD542917       --> ..................................................
FD947975       --> ..................................................
FY428414       --> ..................................................
EX770231       --> GTGGCTTCTCCCACCTCCCGCTGTT.........................
FD557877       --> GTGGCTTCTCCCACCTCCCGCTGTTGCGGCTTCA-TATGAATCTAGTTTA
EV552055       --> GTGGCTTCTCCCACCTCCCGCTGTTGCGGCTTCAATATGAATCTAGTTTA
EY901099       --> GTGGCTTCTCCCACCTCCCGCTGTTGCGGCTTCAATATGAATCTAGTTTA
FD947823       --> GTGGCTTCTCCCACCTCCCGCTGTTGCGGCTTCAATATGAATCTAGTTTA
FD941194       --> GTGGCTTCTCCCACCTCCCGCTGTTGCGGCTTCAATATGAATCTAGTTTA
FY430462       --> GTGGCTTCTCCCACCTCCAGCTGTTGCGGCTTCAATATGAATCTAGTTTA
EV552400       --> ..................................................

               1201   -   1251
UN22522        --> AAACTAAAAACTATATACGTATATACTTATTCACCGAGAGAATGTATATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943824       <-- AAACTAAAAACTATATACGTATATACTTATTCACCGAGAGAATGTATATC
FD944361       <-- AAACTAAAAACTATATACGTATATACTTATTCACCGAGAGAATGTATATC
FD943695       <-- AAACTAAAAACTATATACGTACATACTTATTCACCGAGAGAACGTATATC
FD538863       <-- AAACTAAAAAATATATACGTATATACTTATTCACCGAGAGAATGTATATC
EX774467       <-- AAACTAAAAACTATATACGTATATACTTATTCACCGAGAGAATGTATATC
EY896485       <-- AAACTAAAAACTATATACGTATATACTTATTCACCGAGAGAATGTATATC
FD553899       <-- AAACTAAAAACTATATACGTATATACTTATTCACCGAGAGAATGTATATC
FD967204       <-- AAACTAAAAAATATATACGTATATACTTATTCACCGAGAGAATGTATATC
FD959991       <-- AAACTAAAAACTATATACGTATATACTTATTCACCGAGAGAATGTATATC
FD974884       <-- AAACTAAAAACTATTTACGTATATACTTATTCACCGAGAGAATGTATCTC
EX761368       <-- AAACTAAAAACTATATACGTATATACTTATTCACCGAGAGAATGTATATC
EX754401       --> ..................................................
EX757905       --> ..................................................
FD970962       --> ..................................................
FD972683       --> ..................................................
EX757598       --> ..................................................
EY931851       --> ..................................................
FD542917       --> ..................................................
FD947975       --> ..................................................
FY428414       --> ..................................................
EX770231       --> ..................................................
FD557877       --> AAACTAAAAA........................................
EV552055       --> AAACTAAAAACTATATACGTATATACTTATTCACCGAGAGAATGTATCTC
EY901099       --> AAACTAAAAACTATATACGTATATACTTATTCACCGAGAGAATGTATATC
FD947823       --> AAACTAAAAACTATATACGTACATACTTATTCACCGAGAGAACGTATATC
FD941194       --> AAACTAAAAACTATATACGTATATACTTATTCACCGAGAGAATGTATATC
FY430462       --> AAACTAAAAACTTTATACGTATATACTTATTCACCGAGAGAATGTATATC
EV552400       --> ..................................................

               1251   -   1301
UN22522        --> GGTGTATTTTTT-GCTATTTGCGTTGGTTATATTTTTCCAAGAGTCCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943824       <-- GGTGTATTTTTT-GCTATTTGCGTTGGTTATATTTTTCCAAGAGTCCTCT
FD944361       <-- GGTGTATTTTTT-GCTATTTGCGTTGGTTATATTTTTCCAAGAGTCCTCT
FD943695       <-- GGTGTATTTTTT-GCTATTTGCGTTGGTTATATTTTTCCAAGAGTCCTCT
FD538863       <-- GGTGTTTTTTTT-GCTATTTGCGTTGGTTATATTTTTCCAAGAGTCCTCT
EX774467       <-- GGTGTATTTTTT-GCTATTTGCGTTGGTTATATTTTTCCAAGAGTCCTCT
EY896485       <-- GGTGTATTTTTT-GCTATTTGCGTTGGTTATATTTTTCCAAGAGTCCTCT
FD553899       <-- GGTGTATTTTTT-GCTATTTGCGTTGGTTATATTTTTCCAAGAGTCCTCT
FD967204       <-- GGTGTTTTTTTT-GCTATTTGCGTTGGTTATATTTTTCCAAGAGTCCTCT
FD959991       <-- GGTGTATTTTTT-GCTATTTGCGTTGGTTATATTTTTCCAAGAGTCCTCT
FD974884       <-- GGTGTATTTTTT-GCTATTTGCGTTGGTTATATTTTTCCAAGAGTCCTCT
EX761368       <-- GGTGTTTTTTTTTGCTATTTGCGTTGGTTAT...................
EX754401       --> ..................................................
EX757905       --> ..................................................
FD970962       --> ..................................................
FD972683       --> ..................................................
EX757598       --> ..................................................
EY931851       --> ..................................................
FD542917       --> ..................................................
FD947975       --> ..................................................
FY428414       --> ..................................................
EX770231       --> ..................................................
FD557877       --> ..................................................
EV552055       --> GGTGTATTTTTT-GCTATTTGCGTTGGTTATATTTTTCCAAGAGTCCTCT
EY901099       --> GGTGTATTTTTT-GCTATTTGCGTTGGTTATATTTTTCCAAGAGTCCTCT
FD947823       --> GGTGTATTTTTT-GCTATTTGCGTTGGTTATA..................
FD941194       --> GGTGTATTTTTT-GCTATTTGCGTTGGTTATATTTTTCCAAGAGTCCTCT
FY430462       --> GGTGTATTTTTT-GCTGTTTGCGTTGGTTATATTTTTCCAAGCGTCCTCT
EV552400       --> .............GCTGTTTGCGTTGGTTATATTTTTCCAAGAGTCCTCT

               1301   -   1351
UN22522        --> CTTCTTAGATGAGACTTGCGTAATTTTGGTTTCATTACGATAATTCATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943824       <-- CTTCTTAGATGCGACTTGCGTAATTTTGGTTTCATTACGATAATTCATAA  Raphanus sativus cv Early Scarlet Globe
FD944361       <-- CTTCTTAGATGAGACTTGCGTAATTTTGGTTTCATTACGATAATTCATAA  Raphanus sativus cv Early Scarlet Globe
FD943695       <-- CTTCTTAGATGAGACTTGCGTAATTTTGGTTTCATTACGATAATTCATAA  Raphanus sativus cv Early Scarlet Globe
FD538863       <-- CTTTTTAGATGAGACTTGCGTAATTTTGGTTTCATTACGACAATTCATAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX774467       <-- CTTTTTAGATGAGACTTGCGTAATTTTGGTTTCATTACGATAATTCATAA  Raphanus raphanistrum subsp. landra
EY896485       <-- CTTTTTAGATGAGACTTGCGTAATTTTGGTTTCATTACGATAATTCATAA  Raphanus raphanistrum subsp. maritimus
FD553899       <-- CTCCTTAGATGAGACTTGCGTAATTTTGGTTTCATTAacccttgtacctt  Raphanus raphanistrum subsp. landra
FD967204       <-- CTTTTTAGATGAGACTTGCGTAATTTTGGTTTCATTACGACAATTCATAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD959991       <-- CTTTTTAGATGAGACTTGCGTAATTTTGGTTTCATTACGATAATTCATAA  Raphanus raphanistrum subsp. maritimus
FD974884       <-- CTTTTTAGATGAGACTTGCGTAATTTTGGTTTCATTACGACAATTCATAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761368       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754401       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757905       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD970962       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972683       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757598       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY931851       --> ..................................................  Raphanus sativus var. oleiformis
FD542917       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD947975       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY428414       --> ..................................................  Raphanus sativus cv GSK3-1
EX770231       --> ..................................................  Raphanus raphanistrum subsp. landra
FD557877       --> ..................................................  Raphanus raphanistrum subsp. landra
EV552055       --> CTTCTTAGATGAGACTTGCGTAATTTTGGTTTCATTACGACAATTCATAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901099       --> CTTCTTAGATGAGACTTGCGTAATTTTGGTTTCATTACGATAATTCATAA  Raphanus raphanistrum subsp. maritimus
FD947823       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD941194       --> CTTCTT............................................  Raphanus sativus var. oleiformis
FY430462       --> CTTCTTAGATGAGACTTGCGTAATTTTGGTTTCATTACGATAATTCATAA  Raphanus sativus cv GSK3-1
EV552400       --> CTTCTTAGATGAGACTTGCGTAATTTTGGTTTCATTACGATAATTCATAA  Raphanus raphanistrum subsp. raphanistrum (NY)

               1351   -   1401
UN22522        --> CCCTTGTATCTTGTCCTAGGGGTCCCAGTTCCCTTTAATTAATTATATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943824       <-- CCCTTGTATCTTGTCCTAGGGGTCCCAGTTCCCTTTAATTAATTATATAT  Raphanus sativus cv Early Scarlet Globe
FD944361       <-- CCCTTGTATCTTGTCCTAGGGGTCCCAGTTCCCTTTAATTAATTATATAT  Raphanus sativus cv Early Scarlet Globe
FD943695       <-- CCCTTGTATCTTGTCCTAGGGGTCCCAGTTCCCTTTAATTAATTATATAT  Raphanus sativus cv Early Scarlet Globe
FD538863       <-- CCCTTGTATCTTGTTC-AGGGGTCCCAGTTCCCTTTAATTAATTAT....  Raphanus raphanistrum subsp. raphanistrum (MS)
EX774467       <-- CCCTTGTATCTTGTCCTAGGGGTCCCAGTTCCCTTTAATTAATTATATAT  Raphanus raphanistrum subsp. landra
EY896485       <-- CCCTTGTATCTTGTCCTAGGGGTCCCAGTTCCCTTTAATTAATTATATAT  Raphanus raphanistrum subsp. maritimus
FD553899       <-- gtcctagggctcacaa..................................  Raphanus raphanistrum subsp. landra
FD967204       <-- CCCTTGTATCTTGTTC-AGGGGTCCCAGTTCCCTTTAATTAATTATATAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD959991       <-- CCCTTGTATCTTGTCCTAGGGGTCCCAGTTCCCTTTAATTAATTAT....  Raphanus raphanistrum subsp. maritimus
FD974884       <-- CCCTTGTATCTTGTCC-AGGGGTCCCAGTTCCCTT...............  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761368       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754401       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757905       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD970962       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972683       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757598       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY931851       --> ..................................................  Raphanus sativus var. oleiformis
FD542917       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD947975       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY428414       --> ..................................................  Raphanus sativus cv GSK3-1
EX770231       --> ..................................................  Raphanus raphanistrum subsp. landra
FD557877       --> ..................................................  Raphanus raphanistrum subsp. landra
EV552055       --> CCCTTGTATCTTGTCC-AGGGGTCCCAGTTCCCTTTAATTAATTATATAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901099       --> CCCTTGTATCTTGTCCTAGGGGTCCCAGTTCCCTTTAATTAATTATATAT  Raphanus raphanistrum subsp. maritimus
FD947823       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD941194       --> ..................................................  Raphanus sativus var. oleiformis
FY430462       --> CCCTTGTATCTTG.....................................  Raphanus sativus cv GSK3-1
EV552400       --> CCCTTGTATCTTTTCCTAGGGGTCCCAGTTCCCTTTAACTAATTATATAT  Raphanus raphanistrum subsp. raphanistrum (NY)

               1401   -   1451
UN22522        --> TATTATTATGATTGAAAGATCGTATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943824       <-- TATTATTATGATTGAAAGATCG....
FD944361       <-- TATTATTATGATTGAAAGATCGTATT
FD943695       <-- TATTATTATGAct.............
FD538863       <-- ..........................
EX774467       <-- TATTATTATGATgg............
EY896485       <-- TATTATTAcg................
FD553899       <-- ..........................
FD967204       <-- TATTATTATGATTGAAAGATCG....
FD959991       <-- ..........................
FD974884       <-- ..........................
EX761368       <-- ..........................
EX754401       --> ..........................
EX757905       --> ..........................
FD970962       --> ..........................
FD972683       --> ..........................
EX757598       --> ..........................
EY931851       --> ..........................
FD542917       --> ..........................
FD947975       --> ..........................
FY428414       --> ..........................
EX770231       --> ..........................
FD557877       --> ..........................
EV552055       --> TATTATTATGATTGAAAGATCGTA..
EY901099       --> TATTATTAcg................
FD947823       --> ..........................
FD941194       --> ..........................
FY430462       --> ..........................
EV552400       --> TATTATTATGATTG............