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Alignment for radish unigene UN22540

               1      -     51
UN22540        --> GAGAGACGATAGAAACTGTATTTGGATAACACGCCACACGACATGAGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904235       <-- GAGAGACGATAGAAACTGTATTTGGATAACACGCCACACGACATGAGTCT
FD974642       <-- ..................................................
FD967201       <-- ..................................................
EX758832       <-- ..................................................
EY918164       <-- ..................................................
EV540118       <-- ..................................................
FD967197       <-- ..................................................
FD960575       <-- ..................................................
FD583414       <-- ..................................................
FD966609       <-- ..................................................
EX908169       --> GAGAGACGATAGAAACTGTATTTGGATAACACGCCACACGACATGAGTCT
EY906650       --> ..................................................
EY922146       --> ..................................................
FD970954       --> ..................................................
FD970959       --> ..................................................
EX754522       --> ..................................................
FD948062       --> ..................................................
FD978386       --> ..................................................
EV535437       --> ..................................................
FD964621       --> ..................................................
FD563271       --> ..................................................
EV551294       --> ..................................................
EY915451       --> ..................................................
FD579432       --> ..................................................
FD559252       --> ..................................................
FD970186       --> ..................................................

               51     -    101
UN22540        --> TATGGAATATTCAAAGTGCATGCAAACGAGAGAAGGGATTCAAATCTTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904235       <-- TATGGAATATTCAAAGTGCATGCAAACGAGAGAAGGGATTCAAATCTTAT
FD974642       <-- ..................................................
FD967201       <-- ..................................................
EX758832       <-- ..................................................
EY918164       <-- ..................................................
EV540118       <-- ..................................................
FD967197       <-- ..................................................
FD960575       <-- ..................................................
FD583414       <-- ..................................................
FD966609       <-- ..................................................
EX908169       --> TATGGAATATTCAAAGTGCATGCAAACGAGAGAAGGGATTCAAATCTTAT
EY906650       --> ..................................................
EY922146       --> ..................................................
FD970954       --> ..................................................
FD970959       --> ..................................................
EX754522       --> ..................................................
FD948062       --> ..................................................
FD978386       --> ..................................................
EV535437       --> ..................................................
FD964621       --> ..................................................
FD563271       --> ..................................................
EV551294       --> ..................................................
EY915451       --> ..................................................
FD579432       --> ..................................................
FD559252       --> ..................................................
FD970186       --> ..................................................

               101    -    151
UN22540        --> ATTATAAAATGATGATAAACTGTAGTCTCGCCTCGCCACCAGCAAAAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904235       <-- ATTATAAAATGATGATAAACTGTAGTCTCGCCTCGCCACCAGCAAAAGTT
FD974642       <-- ..................................................
FD967201       <-- ..................................................
EX758832       <-- ..................................................
EY918164       <-- ..................................................
EV540118       <-- ..................................................
FD967197       <-- ..................................................
FD960575       <-- ..................................................
FD583414       <-- ..................................................
FD966609       <-- ..................................................
EX908169       --> ATTATAAAATGATGATAAACTGTAGTCTCGCCTCGCCACCAGCAAAAGTT
EY906650       --> ..................................................
EY922146       --> ..................................................
FD970954       --> ..................................................
FD970959       --> ..................................................
EX754522       --> ..................................................
FD948062       --> ..................................................
FD978386       --> ..................................................
EV535437       --> ..................................................
FD964621       --> ..................................................
FD563271       --> ..................................................
EV551294       --> ..................................................
EY915451       --> ..................................................
FD579432       --> ..................................................
FD559252       --> ..................................................
FD970186       --> ..................................................

               151    -    201
UN22540        --> TGGTTGACTATATATATACCCAAGACATCCAGAGAGAGAGAGTTTGCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904235       <-- TGGTTGACTATATATATACCCAAGACATCCAGAGAGAGAGAGTTTGCAGC
FD974642       <-- ..................................................
FD967201       <-- ..................................................
EX758832       <-- ..................................................
EY918164       <-- ..................................................
EV540118       <-- ..................................................
FD967197       <-- ..................................................
FD960575       <-- ..................................................
FD583414       <-- ..................................................
FD966609       <-- ..................................................
EX908169       --> TGGTTGACTATATATATACCCAAGACATCCAGAGAGAGAGAGTTTGCAGC
EY906650       --> ..................................................
EY922146       --> ..................................................
FD970954       --> ..................................................
FD970959       --> ..................................................
EX754522       --> ..................................................
FD948062       --> ..................................................
FD978386       --> ..................................................
EV535437       --> ..................................................
FD964621       --> ..................................................
FD563271       --> ..................................................
EV551294       --> ..................................................
EY915451       --> ..................................................
FD579432       --> ..................................................
FD559252       --> ..................................................
FD970186       --> ..................................................

               201    -    251
UN22540        --> TCAGAGAATAGTGCAGCATGAATTCGTTTTCTTTGCTTGCTTGTAGAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904235       <-- TCAGAGAATAGTGCAGCATGAATTCGTTTTCTTTGCTTGCTTGTAGAACA
FD974642       <-- ..................................................
FD967201       <-- ..................................................
EX758832       <-- ..................................................
EY918164       <-- ..................................................
EV540118       <-- ..................................................
FD967197       <-- ..................................................
FD960575       <-- ..................................................
FD583414       <-- ..................................................
FD966609       <-- ..................................................
EX908169       --> TCAGAAAATAGTGCAGCATGAATTCGTTTTCTTTGCTTGCTTGTAGAACA
EY906650       --> ..................................................
EY922146       --> ..................................................
FD970954       --> ..................................................
FD970959       --> ..................................................
EX754522       --> ..................................................
FD948062       --> ..................................................
FD978386       --> ..................................................
EV535437       --> ..................................................
FD964621       --> ..................................................
FD563271       --> ..................................................
EV551294       --> ..................................................
EY915451       --> ..................................................
FD579432       --> ..................................................
FD559252       --> ..................................................
FD970186       --> ..................................................

               251    -    301
UN22540        --> TCTGGGATGCCATGCTCAAATCAGAGCTTTTCTCGACTAGGCTGTCCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904235       <-- TCTGGGATGCCATGCTCAAATCAGAGCTTTTCTCGACTAGGCTGTCCAGC
FD974642       <-- ..................................................
FD967201       <-- ..................................................
EX758832       <-- ..................................................
EY918164       <-- ..................................................
EV540118       <-- ..................................................
FD967197       <-- ..................................................
FD960575       <-- ..................................................
FD583414       <-- ..................................................
FD966609       <-- ..................................................
EX908169       --> TCTGGGATGCCATGCTCAAATCAGAGCTTTTCTCGACTAGGCTGTCCAGC
EY906650       --> ..................................................
EY922146       --> ..................................................
FD970954       --> ..................................................
FD970959       --> ..................................................
EX754522       --> ..................................................
FD948062       --> ..................................................
FD978386       --> ..................................................
EV535437       --> ..................................................
FD964621       --> ..................................................
FD563271       --> ..................................................
EV551294       --> ..................................................
EY915451       --> ..................................................
FD579432       --> ..................................................
FD559252       --> ..................................................
FD970186       --> ..................................................

               301    -    351
UN22540        --> TTCTCACCACGGGCTAGAACGCTATCAATGGTCTTAAGGATAATCTTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904235       <-- TTCTCACCACGGGCTAGAACGCTATCAATGGTCTTAAGGATAATCTTGGT
FD974642       <-- ..................................................
FD967201       <-- ..................................................
EX758832       <-- ..................................................
EY918164       <-- ..................................................
EV540118       <-- ..................................................
FD967197       <-- ..................................................
FD960575       <-- ..................................................
FD583414       <-- ..................................................
FD966609       <-- ..................................................
EX908169       --> TTCTCACCACGGGCTAGAACGCTATCAATGGTCTTAAGGATAATCTTGGT
EY906650       --> ..................................................
EY922146       --> ..................................................
FD970954       --> ..................................................
FD970959       --> ..................................................
EX754522       --> ..................................................
FD948062       --> ..................................................
FD978386       --> ..................................................
EV535437       --> ..................................................
FD964621       --> ..................................................
FD563271       --> ..................................................
EV551294       --> ..................................................
EY915451       --> ..................................................
FD579432       --> ..................................................
FD559252       --> ..................................................
FD970186       --> ..................................................

               351    -    401
UN22540        --> CTCATCCAACTCCCTCTGGATTTTCAACAGCTTATCAGCCTCTGCTGGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904235       <-- CTCATCCAACTCCCTCTGGATTTTCAACAGCTTATCAGCCTCTGCTGGGT
FD974642       <-- ..................................................
FD967201       <-- ..................................................
EX758832       <-- ..................................................
EY918164       <-- ..................................................
EV540118       <-- ..................................................
FD967197       <-- ..................................................
FD960575       <-- ..................................................
FD583414       <-- ..................................................
FD966609       <-- ..................................................
EX908169       --> CTCATCCAACTCCCTCTGGATTTTCAACAGCTTATCAGCCTCTGCTGGGT
EY906650       --> ..................................................
EY922146       --> ..................................................
FD970954       --> ..................................................
FD970959       --> ..................................................
EX754522       --> ..................................................
FD948062       --> ..................................................
FD978386       --> ..................................................
EV535437       --> ..................................................
FD964621       --> ..................................................
FD563271       --> ..................................................
EV551294       --> ..................................................
EY915451       --> ..................................................
FD579432       --> ..................................................
FD559252       --> ..................................................
FD970186       --> ..................................................

               401    -    451
UN22540        --> CCTGGAATTTGGTAAGAGCTTCGGCTAAGTAAGGCCAGGGCTGAGAGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904235       <-- CCTGGAATTTGGTAAGAGCTTCGGCTAAGTAAGGCCAGGGCTGAGAGGAG
FD974642       <-- ..................................................
FD967201       <-- ..................................................
EX758832       <-- ..................................................
EY918164       <-- ..................................................
EV540118       <-- ..................................................
FD967197       <-- ..................................................
FD960575       <-- ..................................................
FD583414       <-- ..................................................
FD966609       <-- ..................................................
EX908169       --> CCTGGAATTTGGTAAGAGCTTCGGCTAAGTAAGGCCAGGGCTGAAAGGAG
EY906650       --> ..................................................
EY922146       --> ..................................................
FD970954       --> ..................................................
FD970959       --> ..................................................
EX754522       --> ..................................................
FD948062       --> ..................................................
FD978386       --> ..................................................
EV535437       --> ..................................................
FD964621       --> ..................................................
FD563271       --> ..................................................
EV551294       --> ..................................................
EY915451       --> ..................................................
FD579432       --> ..................................................
FD559252       --> ..................................................
FD970186       --> ..................................................

               451    -    501
UN22540        --> TCTTCTTTAGCAGACCTCCATGTCTCACCAAAACTCTTCTGGTACTCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904235       <-- TCTTCTTTAGCAGACCTCCATGTCTCACCAAAACTCTTCTGGTACTCATC
FD974642       <-- ..................................................
FD967201       <-- ..................................................
EX758832       <-- ..................................................
EY918164       <-- ..................................................
EV540118       <-- ..................................................
FD967197       <-- ..................................................
FD960575       <-- ..................................................
FD583414       <-- ..................................................
FD966609       <-- ..................................................
EX908169       --> TCTTCTTTAGCAGACCTCCATGTCTCACCAAAACTCTTCTGGTACTCATC
EY906650       --> ..................................................
EY922146       --> ..................................................
FD970954       --> ..................................................
FD970959       --> ..................................................
EX754522       --> ..................................................
FD948062       --> ..................................................
FD978386       --> ..................................................
EV535437       --> ..................................................
FD964621       --> ..................................................
FD563271       --> ..................................................
EV551294       --> ..................................................
EY915451       --> ..................................................
FD579432       --> ..................................................
FD559252       --> ..................................................
FD970186       --> ..................................................

               501    -    551
UN22540        --> TATCACCTGACAAGCCATCAACACAACACACAGAGAAACCAAGAAAAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904235       <-- TATCACCTGACAAGCCATCAACACAACACACAGAGAAACCAAGAAAAATC
FD974642       <-- .............................................ggATC
FD967201       <-- ..................................................
EX758832       <-- ..................................................
EY918164       <-- ..................................................
EV540118       <-- ..................................................
FD967197       <-- ..................................................
FD960575       <-- ..................................................
FD583414       <-- ..................................................
FD966609       <-- ..................................................
EX908169       --> TATCACCTGACAAGCCATCAACACAACACACAGAGAAACCAAGAAAAATC
EY906650       --> .......gGACAAGCCATCAACACAACACACAGAGAAACCAAGAAAAATC
EY922146       --> .......gGACAAGCCAT-AACACAACACACAGAGAAACCAAGAAAAATC
FD970954       --> ........GACAAGCCATCAACACAACACACAGAGAAACCAAGAAAAATC
FD970959       --> .......gGACAAGCCATCAACACAACACACAGAGAAACCAAGAAAAATC
EX754522       --> .agggctccACAAGCCATCAACACAACACACAGAGAAACCAAGAAAAATC
FD948062       --> .......................CAACACACAGAGAAACCAAGAAAAATC
FD978386       --> .............................................ggATC
EV535437       --> ..................................................
FD964621       --> ..................................................
FD563271       --> ..................................................
EV551294       --> ..................................................
EY915451       --> ..................................................
FD579432       --> ..................................................
FD559252       --> ..................................................
FD970186       --> ..................................................

               551    -    601
UN22540        --> CTCAAATTCTCTAAAAAAAA-CAAAAGAAATGGCTTCCACAGCTCTCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904235       <-- CTCAAATTCTCTAAAAAAAA-CAAAAGAAATGGCTTCCACAGCTCTCTCA
FD974642       <-- CTCAAATTCTCTAAAAAAA--CAAAAGAGATGGCTTCCACAGCTCTCTCA
FD967201       <-- ....AATTCTCTAAAAAAAA-CAAAAGAAATGGCTTCCACAGCTCTCTCA
EX758832       <-- ..................................................
EY918164       <-- ..................................................
EV540118       <-- ..................................................
FD967197       <-- ..................................................
FD960575       <-- ..................................................
FD583414       <-- ..................................................
FD966609       <-- ..................................................
EX908169       --> CTCAAATTCTCTAAAAAAAA-CAAAAGAAATGGCTTCCACAGCTCTCTCA
EY906650       --> CTCAAATTCTCTAAAAAAAA-CAAAAGAAATGGCTTCCACAGCTCTCTCA
EY922146       --> CTCAGATTCTCTAAAAAAA--CAAAAGAAATGGCTTCCACAGCTCTCTCA
FD970954       --> CTCAAATTCTCTAAAAAAAA-CAAAAGAAATGGCCTCCACAGCTCTCTCA
FD970959       --> CTCAAATTCTCTAAAAAAAA-CAAAAGAAATGGCTTCCACAGCTCTCTCA
EX754522       --> CTCAAATTCTCTAAAAAAAAACAAAAGAAATGGCTTCCACAGCTCTCTCA
FD948062       --> CTCAAATTCTCTAAAAAAAA-CAAAAGAAATGGCTTCCACAGCTCTCTCA
FD978386       --> CTCAAATTCTCTAAAAAAA--CAAAAGAGATGGCTTCCACAGCTCTCTCA
EV535437       --> ......ggCTCTAAAAAAAA-CAAAAGAAATGGCTTCCACAGCTCTCTCA
FD964621       --> ..................................................
FD563271       --> ..................................................
EV551294       --> ..................................................
EY915451       --> ..................................................
FD579432       --> ..................................................
FD559252       --> ..................................................
FD970186       --> ..................................................

               601    -    651
UN22540        --> AGCGCCGTCGTCGGAACTTCCTTCCTCCGCCGTCAAACATCTCCCATCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904235       <-- AGCGCCGTCGTCGGAACTTCCTTC..........................
FD974642       <-- AGCGCCGTCGTCGGAACTTCCTTCCTCCGCCGTCAAACATCTCCCATCAG
FD967201       <-- AGCGCCGTCGTCGGAACTTCCTTCCTCCGCCGTCAAACATCTCCCATCAG
EX758832       <-- ..........................CCGCCGTCAAACATCTCCCATCAG
EY918164       <-- .................................CAAACATCTCCCATCAG
EV540118       <-- ..................................................
FD967197       <-- ..................................................
FD960575       <-- ..................................................
FD583414       <-- ..................................................
FD966609       <-- ..................................................
EX908169       --> AGCGCCGTCGTCGGAACTTCCTTC..........................
EY906650       --> AGCGCCGTCGTCGGAACTTCCTTCCTCCGCCGTCAAACATCTCCCATCAG
EY922146       --> AGCGCCATCGTCGGAACATCCTTCATCCGCCGTCAAACATCTCCCATCAG
FD970954       --> AGCGCCGTCGTCGGAACTTCCTTCCTCCGCCGTCAAACATCTCCCATCAG
FD970959       --> AGCGCCGTCGTCGGAACTTCCTTCCTCCGCCGTCAAACATCTCCCATCAG
EX754522       --> AGCGCCGTCGTCGGAACTTCCTTCCTCCGCCGTCAAACATCTCCCATCAG
FD948062       --> AGCGCCGTCGTCGGAACTTCCTTCCTCCGCCGTCAAACATCTCCCATCAG
FD978386       --> AGCGCCGTCGTCGGAACTTCCTTCCTCCGCCGTCAAACATCTCCCATCAG
EV535437       --> AGCGCCGTCGTCGGAACTTCCTTCCTCCGCCGTCAAACATCTCCCATCAG
FD964621       --> ..................................................
FD563271       --> ..................................................
EV551294       --> ..................................................
EY915451       --> ..................................................
FD579432       --> ..................................................
FD559252       --> ..................................................
FD970186       --> ..................................................

               651    -    701
UN22540        --> CCTCCGTTCCCTCCCCTTAGCCAACACCCAGACCCTCTTCGGTCTCAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904235       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD974642       <-- CCTCCGTTCCCTCCCCTTAGCCAACACTCAGACCCTTTTCGGTCTCAAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD967201       <-- CCTCCGTTCCCTCCCCTTAGCCAACACCCAGACCCTCTTCGGTCTCAAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX758832       <-- CCTCCGTTCCCTCCCCTTAGCCAACACCCAGACCCTTTTCGGTCTCAAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY918164       <-- CCTCCGTTCCCTCCCCTTAGCCAACACTCAGACCATCTTCGGTCTCAAGT  Raphanus raphanistrum subsp. landra
EV540118       <-- .....................................TTCGGTCTCAAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967197       <-- ..........................................TCTCAAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960575       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD583414       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD966609       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX908169       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY906650       --> CCTCCGTTCCCTCCCCTTAGCCAACACCCAGACCCTCTTCGGTCTCAAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY922146       --> CCTCCGTTCCCTCCCCTTAGCCAACACTCAGACCATCTTCGGTCTCAAGT  Raphanus raphanistrum subsp. landra
FD970954       --> CCTCCGTTCCCTCCCCTTAGCCAACACCCAGACCCTCTTCGGTCTCAAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD970959       --> CCTCCGTTCCCTCCCCTTAGCCAACACCCAGACCCTCTTCGGTCTCAAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754522       --> CCTCCGTTCCCTCCCCTTAGCCAACACCCAGACCCTCTTCGGTCTCAAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD948062       --> CCTCCGTTCCCTCCCCTTAGCCAACACTCAGACCATCTTCGGTCTCAAGT  Raphanus sativus cv Early Scarlet Globe
FD978386       --> CCTCCGTTCCCTCCCCTTAGCCAACACTCAGACCCTCTTCGGTCTCAAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV535437       --> CCTCCGTTCCCTCCCCTTAGCCAACACCCAGACCCTCTTCGGTCTCAAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD964621       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD563271       --> ..................................................  Raphanus sativus var. oleiformis
EV551294       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915451       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579432       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD559252       --> ..................................................  Raphanus raphanistrum subsp. landra
FD970186       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               701    -    751
UN22540        --> CAGGAACCGCACGTGGTGGACGCGTCACAGCCATGGCCACATACAAGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904235       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD974642       <-- CAGGAACCGCACGTGGCGGACGCGTCACAGCCATGGCCACATACAAGGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD967201       <-- CAGGAACCGCACGTGGTGGACGCGTCACAGCCATGGCCACATACAAGGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX758832       <-- CAGGAACCGCACGTGGTGGACGCGTCACAGCCATGGCCACATACAAGGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY918164       <-- CAGGAACCGCACGCGGCGGACGCGTCACTGCCATGGCCACATACAAGGTC  Raphanus raphanistrum subsp. landra
EV540118       <-- CAGGAACCGCACGTGGTGGACGCGTCACAGCCATGGCCACATACAAGGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967197       <-- CAGGAACCGCACGTGGTGGACGCGTCACAGCCATGGCCACATACAAGGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960575       <-- ...........................gtGCCATGGCCACATACAAGGTC  Raphanus raphanistrum subsp. maritimus
FD583414       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD966609       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX908169       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY906650       --> CAGGAACCGCACGTGGTGGACGCGTCACAGTCATGGCCACATACAAGGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY922146       --> CAGGAACCGCACGCGGCGGACGCGTCACTGCCATGGCCACATACAAGGTC  Raphanus raphanistrum subsp. landra
FD970954       --> CAGGAACCGCACGTGGTGGACGCGTCACAGCCATGGCCACATACAAGGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD970959       --> CAGGAACCGCACGTGGTGGACGCGTCACAGCCATGGCCACATACAAGGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754522       --> CAGGAACCGCACGTGGTGGACGCGTCACAGCCATGGCCACATACAAGGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD948062       --> CAGGAACCGCACGCGGCGGACGCGTCACTGCCATGGCCACATACAAGGTC  Raphanus sativus cv Early Scarlet Globe
FD978386       --> CAGGAACCGCACGTGGCGGACGCGTCACAGCCATGGCCACATACAAGGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV535437       --> CAGGAACCGCACGTGGTGGACGCGTCACAGCCATGGCCACATACAAGGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD964621       --> ...........................gtGCCATGGCCACATACAAGGTC  Raphanus raphanistrum subsp. maritimus
FD563271       --> ..................................................  Raphanus sativus var. oleiformis
EV551294       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915451       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579432       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD559252       --> ..................................................  Raphanus raphanistrum subsp. landra
FD970186       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               751    -    801
UN22540        --> AAGTTCGTCACTCCAGAAGGAGAGCAAGTGGTTGAGTGCGACGACGACGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904235       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD974642       <-- AAGTTCGTCACTCCAGAAGGAGAGCAAGTGGTTGAGTGCGACGACGACGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD967201       <-- AAGTTCGTCACTCCAGAAGGAGAGCAAGTGGTTGAGTGCGACGACGACGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX758832       <-- AAGTTCGTCACTCCAGAAGGAAAGCAAGTGGTTGAGTGCGACGACGACGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY918164       <-- AAGTTCGTCACTCCAGAAGGAGAGCAAGAGGTTGAGTGCGACGACGACGT  Raphanus raphanistrum subsp. landra
EV540118       <-- AAGTTCGTCACTCCAGAAGGAGAGCAAGTGGTTGAGTGCGACGACGACGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967197       <-- AAGTTCGTCACTCCAGAAGGAGAGCAAGTGGTTGAGTGCGACGACGACGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960575       <-- AAGTTCATCACTCCAGAAGGAGAGCAGGAGGTTGAGTGCGACGACGACGT  Raphanus raphanistrum subsp. maritimus
FD583414       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD966609       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX908169       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY906650       --> AAGTTCGTCACTCCAGAAGGAGAGCAAGTGGTTGAGTGCGACGACGACGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY922146       --> AAGTTCGTCACTCCAGAAGGAGAGCAAGAGGTTGAGTGCGACGACGACGT  Raphanus raphanistrum subsp. landra
FD970954       --> AAGTTCGTCACTCCAGAAGGAGAGCAAGTGGTTGAGTGCGACGACGACGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD970959       --> AAGTTCGTCACTCCAGAAGGAGAGCAAGTGGTTGAGTGCGACGACGACGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754522       --> AAGTTCGTCACTCCAGAAGGAAAGCAAGTGGTTGAGTGCGACGACGACGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD948062       --> AAGTTCATCACTCCAGAAGGAGAGCAAGAGGTTGAGTGCGACGACGACGT  Raphanus sativus cv Early Scarlet Globe
FD978386       --> AAGTTCGTCACTCCAGAAGGAGAGCAAGTGGTTGAGTGCGACGACGACGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV535437       --> AAGTTCGTCACTCCAGAAGGAGAGCAAGTGGTTGAGTGCGACGACGACGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD964621       --> AAGTTCATCACTCCAGAAGGAGAGCAGGAGGTTGAGTGCGACGACGACGT  Raphanus raphanistrum subsp. maritimus
FD563271       --> .......gCACTCCAGAAGGAGAGCAAGTGGTTGAGTGCGACGACGACGT  Raphanus sativus var. oleiformis
EV551294       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915451       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579432       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD559252       --> ..................................................  Raphanus raphanistrum subsp. landra
FD970186       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               801    -    851
UN22540        --> TTACGTCCTCGACGCTGCTGAGGAGGCCGGGCTCGACTTGCCTTACTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904235       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD974642       <-- TTACGTCCTCGACGCTGCTGAGGAGGCCGGGCTCGACTTGCCTTACTCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD967201       <-- TTACGTCCTCGACGCTGCTGAGGAGGCCGGGCTCGACTTGCCTTACTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX758832       <-- TTACGTCCTCGACGCTGCTGAGGAGGCCGGGCTCGACTTGCCTTACTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY918164       <-- TTACGTCCTCGACGCTGCGGAGGAAGCAGGGATCGACTTGCCTTACTCTT  Raphanus raphanistrum subsp. landra
EV540118       <-- TTACGTCCTCGACGCTGCTGAGGAGGCCGGGCTCGACTTGCCTTACTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967197       <-- TTACGTCCTCGACGCTGCTGAGGAGGCCGGGCTCGACTTGCCTTACTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960575       <-- TTACGTCCTCGACGCTGCGGAGGAAGCAGGGATCGACTTGCCTTACTCTT  Raphanus raphanistrum subsp. maritimus
FD583414       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD966609       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX908169       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY906650       --> TTACGTCCTCGACGCTGCTGAGGAGGCCGGGCTCGACTTGCCTTACTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY922146       --> TTACGTCCTCGACGCTGCGGAGGAAGCAGGGATCGACTTGCCTTACTCTT  Raphanus raphanistrum subsp. landra
FD970954       --> TTACGTCCTCGACGCTGCTGAGGAGGCCGGGCTCGACTTGCCTTACTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD970959       --> TTACGTCCTCGACGCTGCTGAGGAGGCCGGGCTCGACTTGCCTTACTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754522       --> TTACGTCCTCGACGCTGCTGAGGAGGCCGGGCTCGACTTGCCTTACTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD948062       --> TTACGTCCTCGACGCTGCTGAGGAGGCCGGGATCGGCTTGCCTTACTCTT  Raphanus sativus cv Early Scarlet Globe
FD978386       --> TTACGTCCTCGACGCTGCTGAGGAGGCCGGGCTCGACTTGCCTTACTCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV535437       --> TTACGTCCTCGACGCTGCTGAGGAGGCCGGGCTCGACTTGCCTTACTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD964621       --> TTACGTCCTCGACGCTGCGGAGGAAGCAGGGATCGACTTGCCTTACTCTT  Raphanus raphanistrum subsp. maritimus
FD563271       --> TTACGTCCTCGACGCTGCTGAGGAGGCCGGGCTCGACTTGCCTTACTCTT  Raphanus sativus var. oleiformis
EV551294       --> ...............................gTCGACTTGCCTTACTCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915451       --> ...............................aTCGACTTGCCTTACTCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579432       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD559252       --> ..................................................  Raphanus raphanistrum subsp. landra
FD970186       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               851    -    901
UN22540        --> GCCGTGCCGGTTCTTGCTCGAGCTGTGCAGGTAAAGTTGTGTCTGGTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904235       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD974642       <-- GCCGTGCCGGTTCTTGCTCGAGCTGTGCAGGTAAAGTTGTGTCTGGTTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD967201       <-- GCCGTGCCGGTTCTTGCTCGAGCTGTGCAGGTAAAGTTGTGTCTGGTTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX758832       <-- GCCGTGCCGGTTCTTGCTCGAGCTGTGCAGGTAAAGTTGTGTCTGGTTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY918164       <-- GCCGTGCCGGTTCTTGCTCGAGCTGCGCAGGTAAAGTTGTGTCTGGTACC  Raphanus raphanistrum subsp. landra
EV540118       <-- GCCGTGCCGGTTCTTGCTCGAGCTGTGCAGGTAAAGTTGTGTCTGGTTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967197       <-- GCCGTGCCGGTTCTTGCTCGAGCTGTGCAGGTAAAGTTGTGTCTGGTTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960575       <-- GCCGTGCTGGTTCTTGCTCGAGCTGCGCAGGTAAAGTTGTGTCTGGTACC  Raphanus raphanistrum subsp. maritimus
FD583414       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD966609       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX908169       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY906650       --> GCCGTGCCGGTTCTTGCTCGAGCTGTGCAGGTAAAGTTGTGTCTGGTTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY922146       --> GCCGTGCCGGTTCTTGCTCGAGCTGCGCAGGTAAAGTTGTGTCTGGTACC  Raphanus raphanistrum subsp. landra
FD970954       --> GCCGTGCCGGTTCTTGCTCGAGCTGTGCAGGTAAAGTTGTGTCTGGTTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD970959       --> GCCGTGCCGGTTCTTGCTCGAGCTGTGCAGGTAAAGTTGTGTCTGGTTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754522       --> GCCGTGCCGGTTCTTGCTCGAGCTGTGCAGGTAAAGTTGTGTCTGGTTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD948062       --> GCCGTGCCGGTTCTTGCTCGAGCTGCGCAGGTAAAGTTG...........  Raphanus sativus cv Early Scarlet Globe
FD978386       --> GCCGTGCCGGTTCTTGCTCGAGCTGTGCAGGTAAAGTTGTGTCTGGTTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV535437       --> GCCGTGCCGGTTCTTGCTCGAGCTGTGCAGGTAAAGTTGTGTCTGGTTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD964621       --> GCCGTGCTGGTTCTTGCTCGAGCTGCGCAGGTAAAGTTGTGTCTGGTACC  Raphanus raphanistrum subsp. maritimus
FD563271       --> GCCGTGCCGGTTCTTGCTCGAGCTGTGCAGGTAAAGTTGTGTCTGGTTCC  Raphanus sativus var. oleiformis
EV551294       --> GCCGTGCCGGTTCTTGCTCGAGCTGCGCAGGTAAAGTTGTGTCTGGTACC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915451       --> GCCGTGCCGGTTCTTGCTCGAGCTGCGCAGGTAAAGTTGTGTCTGGTACC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579432       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD559252       --> ..................................................  Raphanus raphanistrum subsp. landra
FD970186       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               901    -    951
UN22540        --> GTTGACCAGTCTGACCAGAGTTTCCTCGATGATGACCAGATTGCTGAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904235       <-- ..................................................
FD974642       <-- GTTGACCAGTCTGACCAGAGCTTCCTCGATGATGACCAGATTGCTGAAGG
FD967201       <-- GTTGACCAGTCTGACCAGAGTTTCCTCGATGATGACCAGACTGCTGAAGG
EX758832       <-- GTTGACCAGTCTGACCAGAGTTTCCTCGATGATGACCAGATTGCTGAAGG
EY918164       <-- GTTGACCAGTCTGACCAGAGTTTCCTCGATGATGACCAGATTGCTGAAGG
EV540118       <-- GTTGACCAGTCTGACCAGAGTTTCCTCGATGATGACCAGATTGCTGAAGG
FD967197       <-- GTTGACCAGTCTGACCAGAGTTTCCTCGATGATGACCAGATTGCTGAAGG
FD960575       <-- GTTGACCAGTCTGACCAGAGTTTCCTCGATGATGACCAGATTGCTGAAGG
FD583414       <-- ................................gGACCAGATTGCTGAAGG
FD966609       <-- ..................................................
EX908169       --> ..................................................
EY906650       --> GTTGACCAGTCTGACCAGAGTTTCCTCGATGATGACCAGATTGCTGAAGG
EY922146       --> GTTGACCAGTCTGACCAGAGTTTCCTCGATGATGACCAGATTGCTGAAGG
FD970954       --> GTTGACCAGTCTGACCAGAGTTTCCTCGATGATGACCAGATTGCTGAAGG
FD970959       --> GTTGACCAGTCTGACCAGAGTTTCCTCGATGATGACCAGACTGCTGAAGG
EX754522       --> GTTGACCAGTCTGACCAGAGTTTCCTCGATGATGACCAGATTGCTGAAGG
FD948062       --> ..................................................
FD978386       --> GTTGACCAGTCTGACCAGAGCTTCCTCGATGATGACCAGATTGCTGAAGG
EV535437       --> GTTGACCAGTCTGACCAGAGTTTCCTCGATGATGACCAGATTGCTGAAGG
FD964621       --> GTTGACCAGTCTGACCAGAGTTTCCTCGATGATGACCAGATTGCTGAAGG
FD563271       --> GTTGACCAGTCTGACCAGAGCTTCCTCGATGATGACCAGATTGCTGAAGG
EV551294       --> GTTGACCAGTCTGACCAGAGTTTCCTCGATGATGACCAGATTGCTGAAGG
EY915451       --> GTTGACCAGTCTGACCAGAGTTTCCTCGATGATGACCAGATTGCTGAAGG
FD579432       --> ................................gGACCAGATTGCTGAAGG
FD559252       --> ..................................................
FD970186       --> ..................................................

               951    -   1001
UN22540        --> GTTTGTCCTGACTTGTGCGGCTTATCCTACTTCTGATGTTACCATTGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904235       <-- ..................................................
FD974642       <-- GTTTGTTTTGACTTGTGCGGCTTATCCTACTTCTGATGTTACCATTGAGA
FD967201       <-- GTTTGTCCTGACTTGTGCGGCTTATCCTACTTCTGATGTTACCATTGAGA
EX758832       <-- GTTCGTCCTGACTTGTGCGGCTTATCCTACTTCTGATGTTACCATTGAGA
EY918164       <-- GTTTGTCCTGACTTGTGCGGCTTATCCTACTTCTGATGTTACCATTGAGA
EV540118       <-- GTTTGTCCTGACTTGTGCGGCTTATCCTACTTCTGATGTTACCATTGAGA
FD967197       <-- GTTCTTCCTGACTTGTGCGGCTTATCCTACTTTTGATGTTACCATTGAGA
FD960575       <-- GTTTGTCCTGACTTGTGCGGCTTATCCTACTTCTGATGTTACCATTGAGA
FD583414       <-- GTTTGTTTTGACTTGTGCGGCTTATCCTACTTCTGATGTTACCATTGAGA
FD966609       <-- ..................................................
EX908169       --> ..................................................
EY906650       --> GTTTGTCCTGACTTGTGCGGCTTATCCTACTTCTGATGTTACCATTGAGA
EY922146       --> GTTTGTCCTGACTTGTGCGGCTTATCCTACTTCTGATGTTACCATTGAGA
FD970954       --> GTTCTTCCTGACTTGTGCGGCTTATCCTACTTCTGATGTTACCATTGAGA
FD970959       --> GTTTGTCCTGACTTGTGCGGCTTATCCTACTTCTGATGTTACCATTGAGA
EX754522       --> GTTCGTCCTGACTTGTGCGGCTTATCCTACTTCTGATGTTACCATTGAGA
FD948062       --> ..................................................
FD978386       --> GTTTGTTTTGACTTGTGCGGCTTATCCTACTTCTGATGTTACCATTGAGA
EV535437       --> GTTTGTCCTGACTTGTGCGGCTTATCCTACTTCTGATGTTACCATTGAGA
FD964621       --> GTTTGTCCTGACTTGTGCGGCTTATCCTACTTCTGATGTTACCATTGAGA
FD563271       --> GTTTGTTTTGACTTGTGCGGCCTATCCTACTTCTGATGTTACCATTGAGA
EV551294       --> TTTTGTCCTGACTTGTGCGGCTTATCCTACTTCTGATGTTACCATTGAGA
EY915451       --> GTTTGTCCTGACTTGTGCGGCTTATCCTACTTCTGATGTTACCATTGAGA
FD579432       --> GTTTGTTTTGACTTGTGCGGCTTATCCTACTTCTGATGTTACCATTGAGA
FD559252       --> ..................................................
FD970186       --> ..................................................

               1001   -   1051
UN22540        --> CCCACAAAGAAGAAGACATGGTTTAAGACAAAAGCTCCGTAACATGCTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904235       <-- ..................................................
FD974642       <-- CCCACAAAGAAGAAGACATGGTTTAAGACAAAAGCTCCGTAACATGCTGC
FD967201       <-- CCCACAAAGAAGAAGACATGGTTTAAGACAAAAGCTCCGTAACATGCTGC
EX758832       <-- CCCACAAAGAAGAAGACATGGTTTAAGACAAAAGCTCCGTAACATGCTGC
EY918164       <-- CCCACAAAGAAGAAGACATGGTTTAAGACAAAAGCTCCGTAACATGCTGC
EV540118       <-- CCCACAAAGAAGAAGACATGGTTTAAGACAAAAGCTCCGTAACATGCTGC
FD967197       <-- CCCACAAAGAAGAAGACATGGTTTAAGACAAAAGCTCCGTAACATGCTGC
FD960575       <-- CCCACAAAGAAGAAGACATGGTTTAAGACAAAAGCTCCGTAACATGCTGC
FD583414       <-- CCCACAAAGAAGAAGACATGGTTTAAGACAAAAGCTCCGTAACATGCTGC
FD966609       <-- ....gAAAGAAGAAGACATGGTTTAAGACAAAAGCTCCGTAACATGCTGC
EX908169       --> ..................................................
EY906650       --> CCCACAAAGAAGAAGACATGGTTTAAGACAAAAGCTCCGTAACATGCTGC
EY922146       --> CCCACAAAGAAGAAGACATGGTTTAAGACAAAAGCTCCGTAACATGCTGC
FD970954       --> CCCACAAAGAAGAAGACATGGTTTAAGACAAAAGCTCCGTAACATGCTGC
FD970959       --> CCCACAAAGAAGAAGACATGGTTTAAGACAAAAGCTCCGTAACATGCTGC
EX754522       --> CCCACAAAGAAGAAGACATGGTTTAAGACAAAAGCTCCGTAACATGCTGC
FD948062       --> ..................................................
FD978386       --> CCCACAAAGAAGAAGACATGGTTTAAGACAAAAGCTCCGTAACATGCTGC
EV535437       --> CCCACAAAGAAGAAGACATGGTTTAAGACAAAAGCTCCGTAACATGCTGC
FD964621       --> CCCACAAAGAAGAAGACATGGTTTAAGACAAAAGCTCCGTAACATGCTGC
FD563271       --> CCCACAAAGAAGAAGACATGGTTTAAGACAAAAGTTCCGTAACATGCTGC
EV551294       --> CCCACAAAGAAGAAGACATGGTTTAAGACAAAAGCTCCGTAACATGCTGC
EY915451       --> CCCACAAAGAAGAAGACATGGTTTAAGACAAAAGCTCCGTAACATGCTGC
FD579432       --> CCCACAAAGAAGAAGACATGGTTTAAGACAAAAGCTCCGTAACATGCTGC
FD559252       --> ..................................................
FD970186       --> ..................................................

               1051   -   1101
UN22540        --> TTTTGATGGTTTCGTAATCATTCATGTCTTTACATTTTGAGTTGAGTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904235       <-- ..................................................
FD974642       <-- TTTTGATGGTTTCGTAATCATTCATGTCTTTACATTTTGAGTTGAGTTTG
FD967201       <-- TTTTGATGGTTTCGTAATCATTCATGTCTTTACATTTTGAGTTGAGTTTG
EX758832       <-- TTTTGATGGTTTCGTAATCATTCATGTCTTTACATTTTGAGTTGAGTTTG
EY918164       <-- TTTTGATGGTTTCGTAATCATTCATGTCTTTACATTTTGAGTTGAGTTTG
EV540118       <-- TTTTGATGGTTTCGTAATCATTCATGTCTTTACATTTTGAGTTGAGTTTG
FD967197       <-- TTTTGATGGTTTCGTAATCATTCATGTCTTTACATTTTGAGTTGAGTTTG
FD960575       <-- TTTTGATGGTTTCGTAATCATTCATGTCTTTACATTTTGAGTTGAGTTTG
FD583414       <-- TTTTGATGGTTTCGTAATCATTCATGTCTTTACATTTTGAGTTGAGTTTG
FD966609       <-- TTTTGATGGTTTCGTAATCATTCATGTCTTTACATTTTGAGTTGAGTTTG
EX908169       --> ..................................................
EY906650       --> TTTTGATGGTTTCGTAATCATTCATGTCTTTACATTTTGAGTTGAGTTTG
EY922146       --> TTTTGATGGTTTCGTAATCATTCATGTCTTTACATTTTGAGTTGAGTTTG
FD970954       --> TTTTGATGGTTTCGTAATCATTCATGTCTTTACATTTTGAGTTGAGTTTG
FD970959       --> TTTTGATGGTTTCGTAATCATTCATGTCTTTACATTTTGAGTTGAGTTTG
EX754522       --> TTTTGATGGTTTCGTAATCATTCATGTCTTTACATTTTGAGTTGAGTTTG
FD948062       --> ..................................................
FD978386       --> TTTTGATGGTTTCGTAATCATTCATGTCTTTACATTTTGAGTTGAGTTTG
EV535437       --> TTTTGATGGTTTCGTAATCATTCATGTCTTTACATTTTGAGTTGAGTTTG
FD964621       --> TTTTGATGGTTTCGTAATCATTCATGTCTTTACATTTTGAGTTGAGTTTG
FD563271       --> TTTTGATGGTTTCGTAATCATTCATGTCTTTACATTTTGAGTTGAGTTTG
EV551294       --> TTTTGATGGTTTCGTAATCATTCATGTCTTTACATTTTGAGCTGAGTTTG
EY915451       --> TTTTGATGGTTTCGTAATCATTCATGTCTTTACATTTTGAGCTGAGTTTG
FD579432       --> TTTTGATGGTTTCGTAATCATTCATGTCTTTACATTTTGAGTTGAGTTTG
FD559252       --> ............gGTAATCATTCATGTCTTTACATTTTGAGTTGAGTTTG
FD970186       --> ..................................................

               1101   -   1151
UN22540        --> TTGTTTACTTTAGTATAATCTATTGTTGTCTGCTGTAATTGTTCTTGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904235       <-- ..................................................
FD974642       <-- TTGTTTACTTTAGTATAATCTATTGTTGTCTGCTGTAATTGTTCTTGGTT
FD967201       <-- TTGTTTACTTTAGTATAATCTATTGTTGTCTGCTGTAATTGTTCTTGGTT
EX758832       <-- TTGTTTACTTTAGTATAATCTATTGTTGTCTGCTGTAATTGTTCTTGGTT
EY918164       <-- TTGTTTACTTTAGTATAATCTATTGTTGTCTGCTGTAATTGTTCTTGGTT
EV540118       <-- TTGTTTACTTTAGTATAATCTATTGTTGTCTGCTGTAATTGTTCTTGGTT
FD967197       <-- TTGTTTACTTTAGTATAATCTATTGTTGTCTGCTGTAATTGTTCTTGGTT
FD960575       <-- TTGTTTACTTTAGTATAATCTATTGTTGTCTGCTGTAATTGTTCTTGGTT
FD583414       <-- TTGTTTACTTTAGTATAATCTATTGTTGTCTGCTGTAATTGTTCTTGGTT
FD966609       <-- TTGTTTACTTTAGTATAATCTATTGTTGTCTGCTGTAATTGTTCTTGGTT
EX908169       --> ..................................................
EY906650       --> TTGTTTACTTTAGTATAATCTATTGTTGTCTGCTGTAATTGTTCTTGGTT
EY922146       --> TTGTTTACTTTAGTATAATCTATTGTTGTCTGCTGTAATTGTTCTTGGTT
FD970954       --> TTGTTTACTTTAGTATAATCTATTGTTGTCTGCTGTAATTGTTCTTGGTT
FD970959       --> TTGTTTACTTTAGTATAATCTATTGTTGTCTGCTGTAATTGTTCTTGGTT
EX754522       --> TTGTTTACTTTAGTATAATCTATTGTTGTCTGCTGTAATTGTTCTTGGTT
FD948062       --> ..................................................
FD978386       --> TTGTTTACTTTAGTATAATCTATTGTTGTCTGCTGTAATTGTTCTTGGTT
EV535437       --> TTGTTTACTTTAGTATAATCTATTGTTGTCTGCTGTAATTGTTCTTGGTT
FD964621       --> TTGTTTACTTTAGTATAATCTATTGTTGTCTGCTGTAATTGTTCTTGGTT
FD563271       --> TTGTTTACTTTAGTATAATCTATTGTTGTCTGCTGTAATTGTTCTTGGTT
EV551294       --> TTGTTTACTTTAGTATAATCTATTGTTGTCTGCTGTAATTGTTCTTGGTT
EY915451       --> TTGTTTACTTTAGTATAATCTATTGTTGTCTGCTGTAATTGTTCTTGGTT
FD579432       --> TTGTTTACTTTAGTATAATCTATTGTTGTCTGCTGTAATTGTTCTTGGTT
FD559252       --> TTGTTTACTTTAGTATAATCTATTGTTGTCTGCTGTAATTGTTCTTGGTT
FD970186       --> .................ATCTATTGTTGTCTGCTGTAATTGTTCTTGGTT

               1151   -   1201
UN22540        --> TTGAACATCTTTT-GGTGAGATCAATGGATAACTGTTTTAAACTTATGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904235       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD974642       <-- TTGAACATCTTTT-GGTGAGATCAATGGATAACTGTTTTAAACT......  Raphanus raphanistrum subsp. raphanistrum (NY)
FD967201       <-- TTGAACATCTTTT-GGTGAGATCAATGGATAACTGTTTTAAACTTATGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX758832       <-- TTGAACATCTTTT-GGTGAGATCAATGGATAACTGTTTTAAACTTATGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY918164       <-- TGGAACATCTTTT-GGTGAGATCAATGGATAACTGTTTTAAACc......  Raphanus raphanistrum subsp. landra
EV540118       <-- TTGAACATCTTTT-GGTGAGATCAATGGATAACTGTTTTAAACTTATGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967197       <-- TTGAACATCTTTT-GGTGAGATCAATGGATAACTGTTTTAAACTT.....  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960575       <-- TGGAACATCTTTT-GGTGAGATCAATGGGTAACTGTTTTAAACT......  Raphanus raphanistrum subsp. maritimus
FD583414       <-- TTGAACATCTTTT-GGTAAGATCAATGGATAACTGTTTTAAACTc.....  Raphanus sativus cv Rat-Tail Radish #3870
FD966609       <-- TTGAACATCTTTT-GGTGAGATCAATGGATAACTGTTTTAAACTTATGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX908169       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY906650       --> TTGAACATCTTTT-GGTGAGATCA..........................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY922146       --> TGGAACATCTTTT-GGTGAGATCAATGGATAACTGTTTTAAACc......  Raphanus raphanistrum subsp. landra
FD970954       --> TTGAACATCTTTT-GGTGAGATCAATGGATAACTGTTTTAAAC.......  Raphanus raphanistrum subsp. raphanistrum (MS)
FD970959       --> TTGAACATCTTTT-GGTGAGATCAATGGATAACTGTTTTAAACTTATGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754522       --> TTGAACATCTTTT-GGTGAGATCAATGGATAACTGTTTTAA-CTTATGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD948062       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD978386       --> TTGAACATCTTTTTGGTGAGATCAATGGATAACTGTTTTAAACT......  Raphanus raphanistrum subsp. raphanistrum (NY)
EV535437       --> TTGAACATCTTTT-GGTGAGATCAATGGATAACTGTTTTAAACTTATGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD964621       --> TGGAACATCTTTT-GGTGAGATCAATGGGTAACTGTTTTAAACT......  Raphanus raphanistrum subsp. maritimus
FD563271       --> TTGAACATCTTTT-GGTGAGATCAATGGATAACTGTTTTAAACT......  Raphanus sativus var. oleiformis
EV551294       --> TGGAACATCTTTT-GGTAAGATCAATAGATAACTGTTTTAAACTT.....  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915451       --> TGGAACATCTTTT-GGTAAGATCAATAGATAACTGTTTTAAACTT.....  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579432       --> TTGAACATCTTTT-GGTAAGATCAATGGATAACTGTTTTAAACTc.....  Raphanus sativus cv Rat-Tail Radish #3870
FD559252       --> TGGAACATCTTTT-GGTGAGATCAATGGATAACTGTTTTAAACT......  Raphanus raphanistrum subsp. landra
FD970186       --> TTGAACATCTTTT-GGTGAGATCAATGGATAACTGTTTTAAACTTATGGT  Raphanus raphanistrum subsp. raphanistrum (MS)

               1201   -   1251
UN22540        --> AATGCATGTTATGAATAAAGTTTGATGAGAATCTAAACGTTATCTTTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904235       <-- ..................................................
FD974642       <-- ..................................................
FD967201       <-- AATGCATGTTATGAATAAAGTTTGATGAGg....................
EX758832       <-- AATGCATGTTATGAATAAAGTTTGATGAGAATCTAAACGTTATCTTTGAG
EY918164       <-- ..................................................
EV540118       <-- AATGCATGTTATGAATAAAGTTTGATGAGAATC.................
FD967197       <-- ..................................................
FD960575       <-- ..................................................
FD583414       <-- ..................................................
FD966609       <-- AATGCATGTTATGAATAAAGTTTGATGAGAATCTt...............
EX908169       --> ..................................................
EY906650       --> ..................................................
EY922146       --> ..................................................
FD970954       --> ..................................................
FD970959       --> AATGCATGTTATGAATAAAGTTTGATGAG.....................
EX754522       --> AATGCATGTTATGAATAAAGTTTGATGAGAATCTAAACGTTATCTTTGAG
FD948062       --> ..................................................
FD978386       --> ..................................................
EV535437       --> AATGCATGTTATGAATAAAGTTTGATGAGAATC.................
FD964621       --> ..................................................
FD563271       --> ..................................................
EV551294       --> ..................................................
EY915451       --> ..................................................
FD579432       --> ..................................................
FD559252       --> ..................................................
FD970186       --> AATGCATGTTATGAATAAAGTTTGATGAGAATCTt...............

               1251   -   1301
UN22540        --> C
                   ~
EX904235       <-- .
FD974642       <-- .
FD967201       <-- .
EX758832       <-- C
EY918164       <-- .
EV540118       <-- .
FD967197       <-- .
FD960575       <-- .
FD583414       <-- .
FD966609       <-- .
EX908169       --> .
EY906650       --> .
EY922146       --> .
FD970954       --> .
FD970959       --> .
EX754522       --> C
FD948062       --> .
FD978386       --> .
EV535437       --> .
FD964621       --> .
FD563271       --> .
EV551294       --> .
EY915451       --> .
FD579432       --> .
FD559252       --> .
FD970186       --> .