RadishBase

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Alignment for radish unigene UN22550

               1      -     51
UN22550        --> GGATATTATATAAATAGTACTTTACGTCGACGAAACTTAAAAAGAAAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759267       <-- ..................................................
EV544670       <-- ..................................................
EV542235       <-- ..................................................
EY904154       <-- ..................................................
FD528921       <-- ..................................................
EV549135       --> GGATATTATATAAATAGTACTTTACGTCGACGAAACTTAAAAAGAAAACT
EX754973       --> GGATATTATATAAATAGTACTTTACGTCGACGAAACTTAAAAAGAAAACT
FD938335       --> ggaagTTATATAAATAGTACTTTACGTCGACGAAATTTAAAAAGAAAACT
FD981388       --> .....ggATATAAATAGTACTTTACGTCGACGAAACTTAAAAAGAAAACT
FD532454       --> ..................ttTTTACGTCGACGAAACTTAAAAAGAAAACT
FY431837       --> ..................................................
EX755108       --> ..................................................
EV538159       --> ..................................................
EX887296       --> ..................................................
EY908465       --> ..................................................
EX765197       --> ..................................................

               51     -    101
UN22550        --> GGTTTATGATATGGCTCCTATCATCCTAAGAAATAGTTACACCATCGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759267       <-- ..................................................
EV544670       <-- ..................................................
EV542235       <-- ..................................................
EY904154       <-- ..................................................
FD528921       <-- ..................................................
EV549135       --> GGTTTATGATATGGCTCCTATCATCCTAAGAAATAGTTACACCATCGTAC
EX754973       --> GGTTTATGATATGGCTCCTATCATCCTAAGAAATAGTTACACCATCGTAC
FD938335       --> GGTTTATGATATGGCTCCTATCATCCTAAGAAATAGTTACACCATCGTAC
FD981388       --> GGTTTATGATATGGCTCCTATCATCCTAAGAAATAGTTACACCATCGTAC
FD532454       --> GGTTTATGATATGGCTCCTATCATCCTAAGAAATATTTACACCATCGTAC
FY431837       --> .......GATATGGCTCCTATCATCCTAAGAAATAGTTACACCATCGTAC
EX755108       --> ..................................................
EV538159       --> ..................................................
EX887296       --> ..................................................
EY908465       --> ..................................................
EX765197       --> ..................................................

               101    -    151
UN22550        --> CCTCTGAACCTACATGGGCTGGTTGTTTTCCATTAGCCGAATGGGATCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759267       <-- ..................................................
EV544670       <-- ..................................................
EV542235       <-- ..................................................
EY904154       <-- ..................................................
FD528921       <-- ..................................................
EV549135       --> CCTCTGAACCTACATGGGCTGGTTGTTTTCCATTAGCCGAATGGGATCTA
EX754973       --> CCTCTGAACCTACATGGGCTGGTTGTTTTCCATTAGCCGAATGGGATCTA
FD938335       --> CCTCCGAACCTACATGGGCCGGTTGTTTTCCATTAGCCGAATGGGATCTA
FD981388       --> CCTCTGAACCTACATGGGCTGGTTGTTTTCCATTAGCCGAATGGGATCTA
FD532454       --> CCTCTGAACCTACATGGGCTGGTTGCTTTCCATTAGCCGAATGGGATCTA
FY431837       --> CCTCTGAACCTACATGGGCTGGTTGTTTTCCATTAGCCGAATGGGATCTA
EX755108       --> .............ggGGGCTGGTTGTTTTCCATTAGCCGAATGGGATCTA
EV538159       --> ..................................................
EX887296       --> ..................................................
EY908465       --> ..................................................
EX765197       --> ..................................................

               151    -    201
UN22550        --> GTTGGTACTATAACTCACGTTCCTACCGTTTACTTCTACAACAAGCCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759267       <-- ..................................................
EV544670       <-- ..................................................
EV542235       <-- ..................................................
EY904154       <-- ..................................................
FD528921       <-- ..................................................
EV549135       --> GTTGGTACTATAACTCACGTTCCTACCGTTTACTTCTACAACAAGCCATC
EX754973       --> GTTGGTACTATAACTCACGTTCCTACCGTTTACTTCTACAACAAGCCATC
FD938335       --> GTTGGTACTATAACTCACGTTCCTACCGTTTACTTCTACAACAAGCCATC
FD981388       --> GTTGGTACTATAACTCACGTTCCTACCGTTTACTTCTACAACAAGCCATC
FD532454       --> GTTGGTACTATAACTCACGTTCCTACCGTTTACTTTTACAACAAGCCATC
FY431837       --> GTTGGTACTATAACTCACGTTCCTACCGTTTACTTCTACAACAAGCCATC
EX755108       --> GTTGGTACTATAACTCACGTTCCTACCGTTTACTTCTACAACAAGCCATC
EV538159       --> ..................................................
EX887296       --> ..................................................
EY908465       --> ..................................................
EX765197       --> ..................................................

               201    -    251
UN22550        --> TGAATCGTTCCAGGGCAATGTAGTCGAAACCCTAAGAAACTCGTTGAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759267       <-- ..................................................
EV544670       <-- ..................................................
EV542235       <-- ..................................................
EY904154       <-- ..................................................
FD528921       <-- ..................................................
EV549135       --> TGAATCGTTCCAGGGCAATGTAGTCGAAACCCTAAGAAACTCGTTGAGCC
EX754973       --> TGAATCGTTCCAGGGCAATGTAGTCGAAACCCTAAGAAACTCGTTGAGCC
FD938335       --> TGAATCGTTCCAGGGCAATGTAGTCGAAACCCTAAGAAACTCGTTGAGCC
FD981388       --> TGAATCGTTCCAGGGCAATGTAGTCGAAACCCTAAGAAACTCGTTGAGCC
FD532454       --> TGAATCGTTCCAGGGCAATGTAGTCGAAACCCTAAGAAACTCGTTGAGCC
FY431837       --> TGAATCGTTCCAGGGCAATGTAGTGGAAACCCTAAGAAACTCGTTGAGCC
EX755108       --> TGAATCGTTCCAGGGCAATGTAGTCGAAACCCTAAGAAACTCGTTGAGCC
EV538159       --> ..................................................
EX887296       --> ..................................................
EY908465       --> ..................................................
EX765197       --> ..................................................

               251    -    301
UN22550        --> GTGCGCTTTTTCACTTCTACCCTATGGCCGGCCGTCTTAGGTGGCTCCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759267       <-- ..................................................
EV544670       <-- ..................................................
EV542235       <-- ..................................................
EY904154       <-- ..................................................
FD528921       <-- ..................................................
EV549135       --> GTGCGCTTTTTCACTTCTACCCTATGGCCGGCCGTCTTAGGTGGCTCCCT
EX754973       --> GTGCTCTTTTTCACTTCTACCCTATGGCCGGCCGTCTTAGGTGGCTCCCT
FD938335       --> GTGCGCTTTTTCACTTCTACCCTATGGCCAGCCGTCTTAGGTGGCTCCCT
FD981388       --> GTGCGCTTTTTCACTTCTACCCTATGGCCGGCCGTCTTAGGTGGCTCCCT
FD532454       --> GTGCGCTTTTTCACTTCTACCCTATGGCCGGCCGTCTTAGGTGGCTCCCT
FY431837       --> GTGCGCTTTTTCACTTCTACCCTATGGCCGGCCGTCTTAGGTGGCTCCCT
EX755108       --> GTGCTCTTTTTCACTTCTACCCTACGGCCGGCCGTCTTAGGTGGCTCCCT
EV538159       --> ..................................................
EX887296       --> ..................................................
EY908465       --> ..................................................
EX765197       --> ..................................................

               301    -    351
UN22550        --> CGGGGCCGGTTAGAGCTCGATTGTAACGCCGAGGGAGTGTCATTCATGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759267       <-- ..................................................
EV544670       <-- ..................................................
EV542235       <-- ..................................................
EY904154       <-- ..................................................
FD528921       <-- ..................................................
EV549135       --> CGGGGCCGGTTAGAGCTCGATTGTAACGCCGAGGGAGTGTCATTCATGGA
EX754973       --> CGGGGCCGGTTAGAGCTAGATTGTAACGCCGAGGGAGTGTCATTCATGGA
FD938335       --> CGGGGCCGGTTAGAGCTCGATTGTAACGCCGAGGGAGTGTCATTCATGGA
FD981388       --> CGGGGCCGGTTAGAGCTCGATTGTAACGCCGAGGGAGTGTCATTCATGGA
FD532454       --> CGGGGCCGGTTAGAGCTCGATTGTAACGCCGAGGGAGTGTCACTCGTAGA
FY431837       --> CGGGGCCGGTTAGAGCTCGATTGTAACGCCGAGGGAGTGTCATTCATGGA
EX755108       --> CGGGGCCGGTTAGAGCTAGATTGTAACGCCGAGGGAGTGTCATTCATGGA
EV538159       --> ..................................................
EX887296       --> ..................................................
EY908465       --> ..................................................
EX765197       --> ..................................................

               351    -    401
UN22550        --> AGCCGAGTCCGAGGCAAAGCTTTCAGATTTCAACGATTTCTCTCCAACGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759267       <-- ..................................................
EV544670       <-- ..................................................
EV542235       <-- ..................................................
EY904154       <-- ..................................................
FD528921       <-- ..................................................
EV549135       --> AGCCGAGTCCGAGGCAAAGCTTTCAGATTTCAACGATTTCTCTCCTACGC
EX754973       --> AGCCGAGTCCGAGGCAAAGCTTTCAAATTTCAACGATT-CTCTCCAACGC
FD938335       --> AGCCGAGTCCGAGGCAAAGCTTGCAGATTTCAACGATTTCTCTCCAACGC
FD981388       --> AGCCGAGTCCGAGGCAAAGCTTTCAGATTTCAACGATTTCTCTCCTACGC
FD532454       --> AGCCGATTCCGAGGCAAAGCTTTCAGATTTCAACGATTTCTCTCCAACTC
FY431837       --> AGCCGAGTCCGAGGCAAAGCTTTCAGATTTCAACGATTTCTCTCCAACGC
EX755108       --> AGCCGAGTCCGAGGCAAAGCTTTCAGATTTCAACGATTTCTCTCCAACGC
EV538159       --> ........................gGATTTCAACGATTTCCCTCCAACGC
EX887296       --> ..................................................
EY908465       --> ..................................................
EX765197       --> ..................................................

               401    -    451
UN22550        --> CAGAATTTGAGAAACTTGTTCCGCAAGTTGACTACAAACACCCTATTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759267       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV544670       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542235       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904154       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD528921       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV549135       --> CAGAATTTGAGAAACTTGTTCCGCAAGTTGACTACAAACACCCTATTGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX754973       --> CAGAATTTGAAAAACTTGTTCCGCAAGTTGACTACAAACACCCTATTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD938335       --> CAGAATTTGAAAAACTTGTTCCTCAAGTTGACTACAAACACCCTATTGAA  Raphanus sativus var. oleiformis
FD981388       --> CAGAATTTGAGAAACTTGTTCCGCAAGTTGACTACAAACACCCTATTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD532454       --> CAGAATTTGAGAAACTTGTTCCGCAAGTTGACTACAAACACCCTATTGAA  Raphanus raphanistrum subsp. maritimus
FY431837       --> CAGAATTTGAGAAACTTGTTCCGCAAGTTGACTACAAACACCCTATTGAA  Raphanus sativus cv GSK3-1
EX755108       --> CAGAATTTGAAAAACTTGTTCCGCAAGTTGACTACAAACACCCTATTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538159       --> CAGAATTTGAAAAACTTGTTCCGCAAGTTGACTACAAACACCCTATTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887296       --> ..................................................  Raphanus sativus var. oleiformis
EY908465       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX765197       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               451    -    501
UN22550        --> ACGATCCCTCTCTTCTTAGCTCAGGTCACCAGATTTAAATGCGGCGGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759267       <-- ..................................................
EV544670       <-- ..................................................
EV542235       <-- ..................................................
EY904154       <-- ..................................................
FD528921       <-- ..................................................
EV549135       --> ACGATCCCTCTCTTCTTAGCTCAGGTCACCAGATTTAAATGCGGGGGAAT
EX754973       --> ACGATCCCTCTCTTCTTAGCTCAGGTCACCAGATTTAAATGCGGCGGGAT
FD938335       --> ACGATCCCTCTCTTCTTAGCTCAGGTTACTAGATTTAAATGTGGCGGAAT
FD981388       --> ACGATCCCTCTCTTCTTAGCTCAGGTCACCATATTTAAATGCGGGGGAAT
FD532454       --> ATGATCCCTCTCTTCTTAGCTCAGGTCACTAGATTTAAATGTGGCGGAAT
FY431837       --> ACGATCCCTCTCTTCTTAGCTCAGGTCACCAGATTTAAATGCGGCGGAAT
EX755108       --> ACGATCCCTCTCTTCTTAGCTCAGGTCACCAGATTTAAATGCGGCGGGAT
EV538159       --> ACGATCCCTCTCTTCTTAGCTCAGGTCACCAGATTTAAATGCGGCGGAAT
EX887296       --> ..................................................
EY908465       --> ..................................................
EX765197       --> ..................................................

               501    -    551
UN22550        --> AAGCCTCGGCGTCAGCATTTCACACGCTGTGGTCGATGGACAAAGCGCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759267       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV544670       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542235       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904154       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD528921       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV549135       --> AAGCCTCGGCGTCAGCATTTCACACGCTGTGGTCGATGGACAAAGCGCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX754973       --> AAGCCTCGGCGTCAGCATTTCACACGCTGTGGTCGATGGACAAAGCGCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD938335       --> AAGCCTCGGCGTCAGCATTTCACACGCGGTGGTCGACGGACAAAGCGCGT  Raphanus sativus var. oleiformis
FD981388       --> AAGCCTCGGCGTCAGCATTTCACACGCTGTGGTCGATGGACAAAGCGCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD532454       --> AAGCCTCGGCGTCAGCATTTCACACGCTGTGGTCGATGGACAAAGCGCGT  Raphanus raphanistrum subsp. maritimus
FY431837       --> AAGCCTCGGCGTCAGCATTTCACACGCGGTGGTCGACGGACAAAGCGCGT  Raphanus sativus cv GSK3-1
EX755108       --> AAGCCTCGGCGTCAGCATTTCACACGCTGTGGTCGATGGACAAAGCGCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538159       --> AAGCCTCGGCGTCAGCATTTCACACGCGGTGGTCGACGGACAAAGCGCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887296       --> .....gCGGCGTCAGCATTTCACACGCGGTGGTCGACGGACAAAGCGCGT  Raphanus sativus var. oleiformis
EY908465       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX765197       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               551    -    601
UN22550        --> TTCACTTCTTGTCGGAATGGGGAAGAATCGCTCGTGGGGAACCTCTTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759267       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV544670       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542235       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904154       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD528921       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV549135       --> TTCACTTCTTGTCGGAATGGGGAAGAATCGCTCGTGGGGAACCTCTTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX754973       --> TTCACTTCTTGTCGGAATGGGGAAGAATCGCTCGTGGGGAACCTCTTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD938335       --> TTCACTTCTTGTCGGAATGGGGAAGAATCGCTCGCGGGGAACCTCTTGAA  Raphanus sativus var. oleiformis
FD981388       --> TTCACTTCTTGTCGGAATGGGGAAGAATCGCTCGTGGGGAACCTCTTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD532454       --> TTCACTTCTTGTCGGAATGGGGAAGAATCGCTCGCGGGGAACCTCTTGAA  Raphanus raphanistrum subsp. maritimus
FY431837       --> TTCACTTCTTGTCGGAATGGGGAAGAATCGCTCGCGGGGAACCTCTTGAA  Raphanus sativus cv GSK3-1
EX755108       --> TTCACTTCTTGTCGGAATGGGGAAGAATCGCTCGTGGGGAACCTCTTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538159       --> TTCACTTCTTGTCGGAATGGGGAAGAATCGCTCGTGGGGAACCTCTTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887296       --> TTCACTTCTTGTCGGAATGGGGAAGAATCGCTCGCGGGGA-TCTCTTGAA  Raphanus sativus var. oleiformis
EY908465       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX765197       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               601    -    651
UN22550        --> ACCATTCCAATTCTCGACCGCAAAATCCTCTGGACTGGTGAACCGCTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759267       <-- ..................................................
EV544670       <-- ..................................................
EV542235       <-- ..................................................
EY904154       <-- ..................................................
FD528921       <-- ..................................................
EV549135       --> ACCATTCCAATTCTCGACCGCAAAATCCTCTGGACTGGTGAACCGCTTCC
EX754973       --> ACCATTCCAATTCTCGACCGCAAAATCCTCTGGACTGGTGAACCGCTTCC
FD938335       --> ACCATTCCAATTCTCGACCGCAAAATCCTCTGGACTGGTGAACCGCTTCC
FD981388       --> ACCATTCCAATTCTCGACCGCAAAATCCTCTGGACTGGTGAACCGCTTC.
FD532454       --> ACCATCCCAATTCTCGACCGCAAAATCCTCTGGACTGGTGAACCGCTTCC
FY431837       --> ACCATTCCAATTCTCGACCGCAAAATCCTCTGGACTGGTGAACCGCTTCC
EX755108       --> ACCATTCCAATTCTCGACCGCAAAATCCTCTGGACTGGTGAACCGCTTCC
EV538159       --> ACCATTCCAATTCTCGACCGCAAAATCCTCTGGACTGGTGAACCGCTTCC
EX887296       --> ACCATTCCAATCCTCGACCGCAAAATCCTCTGGACTGGTGAACCGCTTCC
EY908465       --> .............gCGACCGCAAAATCCTCTGGACTGGTGAACCGCTTCC
EX765197       --> ..................................................

               651    -    701
UN22550        --> GCCGTTTGCCTCGCCACCTCAGTGCGAACGCAAAGGGTTTGAACAGCCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759267       <-- ..................................................
EV544670       <-- ..................................................
EV542235       <-- ..................................................
EY904154       <-- ..................................................
FD528921       <-- ..................................................
EV549135       --> GCCGTTTGCCTCGCCACCTCTGTGCGAACGCAAAGGGTTTGAACAGCCGC
EX754973       --> GCCGTTTGCCTCGCCACC................................
FD938335       --> GCCGTTTGCCTCGCCACCTCAGTGCGAACGCAAAGGGTTTGAGCAGCCGC
FD981388       --> ..................................................
FD532454       --> GCCGTTTGCCTCGCCACCTCAGTGCGAACGCAAAGGGTTTGAACAGCCGC
FY431837       --> GCCGTTTGCCTCGCCACCTCAGTGCGAACGCAAAGGGTTTGAACAGCCGC
EX755108       --> GCCGTTTGCCTCGCCACCTCAGTGCGAACGCAAAGGGTTTGAACAGCCGC
EV538159       --> GCCGTTTGCCTCGCCACCTCAGTGCGAACGTAAAGGGTTTGAACAGCCGC
EX887296       --> GCCGTTTGCCTCGCCACCTCAGTGCGAACGCAAAGGGTTTGAACAGCCGC
EY908465       --> GCCGTTTGCCTCGCCACCTCAGTGCGAACGTAAAGGGTTTGAACAGCCGC
EX765197       --> ..................................................

               701    -    751
UN22550        --> CGTTACTGATCGGAGAAACTGACAATGTAGAAGAAAGAAAGAAGAAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759267       <-- ..................................................
EV544670       <-- ..................................................
EV542235       <-- ..................................................
EY904154       <-- ..................................................
FD528921       <-- ..................................................
EV549135       --> CGTTACTGATCGGAGAAACCGACAATGTAGAAGAAAGAAAGA........
EX754973       --> ..................................................
FD938335       --> CGTTACTGATCGGAGAAACTGACAATGTAGAAGAA-GAAAGA-G-AAACA
FD981388       --> ..................................................
FD532454       --> CGTTACTGATCGGAGAAACTGACA-TGTAGAAGAAg..............
FY431837       --> CGTTACTGATCGGAGAAACTGACAATGTAGAAGAAAGAAAGAAGAAAACA
EX755108       --> CGTTACTGATCGGAGAAACTGACAATGTAGAAGAAAGAAAGAAGAAAACA
EV538159       --> CGTTACTGATCGGAGAAACTGACAATGTAGAAGAAAGAAAGAAGAAAACA
EX887296       --> CGTTACTGATCGGAGAAACTGACAATGTAGAAGAAAGAAAGAAGAAAACA
EY908465       --> CGTTACTGATCGGAGAAACTGACAATGTAGAAGAAAGAAAGAAGAAAACA
EX765197       --> ..................................................

               751    -    801
UN22550        --> ACTGTAGAGATACTAAAACTTAGCAAAACTCAGCTTGAAAAGCTTAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759267       <-- ...............................AGCTTGAAAAGCTTAGAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV544670       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542235       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904154       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD528921       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV549135       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX754973       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD938335       --> ACTGTAGAGATACTAAAACTTAGCAAA-CACAGCTTGAAA-GC-TAGAAG  Raphanus sativus var. oleiformis
FD981388       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD532454       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY431837       --> ACTGTAGAGATACTAAAACTTAGCAAAACACAGCTTGAAAAGCTTAGAAG  Raphanus sativus cv GSK3-1
EX755108       --> ACTGTACAGATACTAAAACTTAGCAAAACTCAGCTTGAAA-GCTTAGAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538159       --> ACTGTAGAGATACTAAAACTTAGCAAAACTCAGCTTGAAAAGCTTAGAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887296       --> ACTGTAGAGATACTAAAACTTAGCAAAACACAGCTTGAAAAGCTTAGAAG  Raphanus sativus var. oleiformis
EY908465       --> ACTGTAGAGATACTAAAACTTAGCAAAACTCAGCTTGAAAAGCTTAGAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX765197       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               801    -    851
UN22550        --> CAGAGTGAATGCAAGTGAATACGCTGATCCAGCTAGAGGGTTTACAAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759267       <-- CAGAGTGAATGCAAGTGAATACGCTGATCCAGCTAGAGGGTTTACAAGGT
EV544670       <-- ............................CCAGCTAGAGGGTTTACAAGGT
EV542235       <-- ................................CTAGAGGGTTTACAAGGT
EY904154       <-- ..................................................
FD528921       <-- ..................................................
EV549135       --> ..................................................
EX754973       --> ..................................................
FD938335       --> CAGAG.............................................
FD981388       --> ..................................................
FD532454       --> ..................................................
FY431837       --> CAGAGTGAATGCAAGTGAATACGCTGATCCAGCTAGAGGGTTTACAAGGT
EX755108       --> CAGAGTGAATGCAAGTGAATACGCTGATCCAGCTAGAGGGTTTACAAGGT
EV538159       --> CAGAGTGAATGCAAGTGAATACGCTGATCCAGCTAGAGGGTTTACAAGGT
EX887296       --> CAGAGTGAATGCAAGTGAATACGCTGATCCAGCTAGAGGGTTTACAAGGT
EY908465       --> CAGAGTGAATGCAAGTGAATACGCTGATCCAGCTAGAGGGTTTACAAGGT
EX765197       --> ..................................................

               851    -    901
UN22550        --> ACGAGACGGTCGCGGGACATGTGTGGAGGTGCGCTTCTAAAGCACGTGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759267       <-- ACGAGACGGTCGCGGGACATGTGTGGAGGTGCGCTTCTAAAGCACGTGGG
EV544670       <-- ACGAGACGGTCGCGGGACATGTGTGGAGTTGCGCTTCTAAAGCACGTGGG
EV542235       <-- ACGAGACGGTCGCGGGACATGTGTGGAGGTGCGCTTCTAAAGCACGTGGG
EY904154       <-- ..................................................
FD528921       <-- ..................................................
EV549135       --> ..................................................
EX754973       --> ..................................................
FD938335       --> ..................................................
FD981388       --> ..................................................
FD532454       --> ..................................................
FY431837       --> ACGAGACGGTCGCGGGACATGTGTGGAGGTGCGCTTCTAAAGCACGTGGG
EX755108       --> ACGAGACG-TCGCGGGACATGTGTGGAGGTGCGCTT..............
EV538159       --> ACGAGACGGTCGCGGGACATGTGTGGAGGTGCGCTTCTAAAGCACGTGGG
EX887296       --> ACGAGACGGTCGCGGGACATGTGTGGAGGTGCGCTTCTAAAGCACGTGGG
EY908465       --> ACGAGACGGTCGCGGGACATGTGTGGAGGTGCGCTTCTAAAGC--GTGGG
EX765197       --> ..................................................

               901    -    951
UN22550        --> CACTCCCCAGAGCAACCCACGTCTCTGGGAATCTGTGTAGATACTCGTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759267       <-- CACTCCCCAGAGCAACCCACGTCTCTGGGAATCTGTGTAGATACTCGTAG
EV544670       <-- CACTCCCCAGAGCAACCCACGTCTCTGGGAATCTGTGTAGATACTCGTAG
EV542235       <-- CACTCCCCAGAGCAACCCACGTCTCTGGGAATCTGTGTAGATACTCGTAG
EY904154       <-- .........GAGCAACCCACGTCTCTGGGAATCTGTGTAGATACTCGTAG
FD528921       <-- ..................................................
EV549135       --> ..................................................
EX754973       --> ..................................................
FD938335       --> ..................................................
FD981388       --> ..................................................
FD532454       --> ..................................................
FY431837       --> CACTCCCCAGAGCAACCCACGTCTCTGGGAATCTGTGT............
EX755108       --> ..................................................
EV538159       --> CACTCCCCAGAGCAACCCACGTCTCTGGGAATCTGTGTAGATACTCGTAG
EX887296       --> CACTCCCCAGAGCAACCCACGTCTCTGGGAATCTGTGTAGATACTCGTAG
EY908465       --> CACTCCCCAGAGCAACCCACGTCTCTGGGAATCTGTGTAGATACTCGTAG
EX765197       --> ..................................................

               951    -   1001
UN22550        --> TCGGGTGCAGCCACCTCTACCACGCGGCTACTTTGGCAATGCCACTATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759267       <-- TCGGGTGCAGCCACCTCTACCACGCGGCTACTTTGGCAATGCCACTATTA
EV544670       <-- TCGGGTGCAGCCACCTCTACCACGCGGCTACTTTGGCAATGTCACTATTA
EV542235       <-- TCGGGTGCAGCCACCTCTACCACGCGGCTACTTTGGCAATGCCACTATTA
EY904154       <-- TTGGGTGCAGCCACCTCTACCACGCGGCTACTTTGGCAATGCCGCTATTA
FD528921       <-- ..................................................
EV549135       --> ..................................................
EX754973       --> ..................................................
FD938335       --> ..................................................
FD981388       --> ..................................................
FD532454       --> ..................................................
FY431837       --> ..................................................
EX755108       --> ..................................................
EV538159       --> TCGGGTGCAGCCACCTCTACCACGCGGCTACTTTGGCAATGCCACTATTA
EX887296       --> TCGGGTGCAGCCACCTCTACCACGCGGCTACTTTGGCAATGCCACTATTA
EY908465       --> TTGGGTGCAGCCACCTCTACCACGCGGCTACTTTGGCAATGCCGCTATTA
EX765197       --> ..................................................

               1001   -   1051
UN22550        --> ATGCGGTCGCAAGAAGCACCTCAGGTGAACTCATATCGAATGGG-TTGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759267       <-- ATGCGGTCTCAAGAAGCACCTCAGGTGAACTCATATCGAATGGG-TTGGG
EV544670       <-- ATGCGGTCGCAAGAAGCACCTCAGGTGAACTTATATCGAATGGG-TTGGG
EV542235       <-- ATGCGGTCGCAAGAAGCACCTCAGGTGAACTCATATCGAATGGG-TTGGG
EY904154       <-- ATGCGGTCGCAAGAAGCACCTCAGGTGAACTCATATCGAATGGG-TTGGG
FD528921       <-- .................................TATCGAATGGG-TTGGG
EV549135       --> ..................................................
EX754973       --> ..................................................
FD938335       --> ..................................................
FD981388       --> ..................................................
FD532454       --> ..................................................
FY431837       --> ..................................................
EX755108       --> ..................................................
EV538159       --> ATGCGGTCGCAAGAAGCACCTCAGGTGAACTCATATCGAATGGGGTTGGG
EX887296       --> ATGCGGTCGCACGAAGCACCTCAGGTGAACTCATATCGAATGGG-TTGGG
EY908465       --> ATGCGGTCGCAAGAAGCACCTCAGGTGAACTCATATCGAATGGG-TTGGG
EX765197       --> ..................................................

               1051   -   1101
UN22550        --> TTTCGCCGCCGAAAAAATCAGTGAAGCCATAAAAAGTGTGACAAACGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759267       <-- TTTCGCCGCCGAAAAAATCAGTGAAGCCATAAAAAGTGTGACAAACGAAT
EV544670       <-- TTTCGCCGCCGAAAAAATCAGTGAAGCCATAAAAAGTGTGACAAACGAAT
EV542235       <-- TTTCGCCGCCGAAAAAATCAGTGAAGCCATAAAAAGTGTGACAAACGAAT
EY904154       <-- TTTCGCCGCCGAAAAAATCAGTGAATCCATAAAAAGTGTGACAAACGAAT
FD528921       <-- TTTCGCCGCCGAAAAAATCAGTGAAGCCATAAAAAGTGTGACAAACGAAT
EV549135       --> ..................................................
EX754973       --> ..................................................
FD938335       --> ..................................................
FD981388       --> ..................................................
FD532454       --> ..................................................
FY431837       --> ..................................................
EX755108       --> ..................................................
EV538159       --> TTTCGCCGCCGAAAAAATCAGTGAAGCCATAAAAAGTGTGACAAACGAAT
EX887296       --> TTTCGCGGCCGAAAAAATCAGTGAAGCCATAAAGAGTGTGACAAACGAAT
EY908465       --> TTTCGCCGCCGAAAAAATCAGTGAATCCATAAAAAGTGTGACAAACGAAT
EX765197       --> ..................................................

               1101   -   1151
UN22550        --> ACGTAATGAATGGG-ATAGAGTATCTAAAAAACCACGAGGATCTGAAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759267       <-- ACGTAATGAATGGG-ATAGAGTATTTAAAAAACCACGAGGATCTGAAGAC
EV544670       <-- ACGTAATGAATGGG-ATAGAGTATCTAAAAAACCACGAGGATCTGAAGAC
EV542235       <-- ACGTAATGAATGGG-ATAGAGTATCTAAAAAACCACGAGGATCTGAAGAC
EY904154       <-- ACGTAATGAATGGG-ATAGAGTATCTAAAAAACCACGAGGATCTGAAGAC
FD528921       <-- ACGTAATGAATGGG-ATAGAGTATCTAAAAAACCACGAGGATCTGAAGAC
EV549135       --> ..................................................
EX754973       --> ..................................................
FD938335       --> ..................................................
FD981388       --> ..................................................
FD532454       --> ..................................................
FY431837       --> ..................................................
EX755108       --> ..................................................
EV538159       --> ACGTAATGAATGGGGATAGAGTATC.........................
EX887296       --> ACGTAATGACTGGG-ATAGAGTATCTAAAAAACCACGAGGATCTGAAGAC
EY908465       --> ACGTAATGAATGGG-ATAGAGTATCTAAAAAACCACGAGGATCTGAAGAC
EX765197       --> ..................................................

               1151   -   1201
UN22550        --> GTTTCAAGATATACATGCCTTGGGAAGCACGGAAGGTCCATTCTACGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759267       <-- GTTTCAAGATATACATGCCTTGGGAAGCACGGAAGGTCCATTTTACGGAA
EV544670       <-- GTTTCAAGATATACATGCCTTGGGAAGCACGGAAGGTCCATTTTACGGAA
EV542235       <-- GTTTCAAGATATACATGCCTTGGGAAGCACGGAAGGTCCATTTTACGGAA
EY904154       <-- GTTTCAAGATATACGTGCCTTGGGAAGCACGGAAGGTCCATTCTACGGAA
FD528921       <-- GTTTCAAGATATACATGCCTTGGGAAGCACGGAAGGTCCATTCTACGGAA
EV549135       --> ..................................................
EX754973       --> ..................................................
FD938335       --> ..................................................
FD981388       --> ..................................................
FD532454       --> ..................................................
FY431837       --> ..................................................
EX755108       --> ..................................................
EV538159       --> ..................................................
EX887296       --> GTTTCAAGATATACATGCCTTGGGAAGCACGGAGGGTCCATTC.......
EY908465       --> GTTTCAAGATATACGTGCCTTGGGAAGCACGGAAAGTCCATTCTACGGAA
EX765197       --> ..................................................

               1201   -   1251
UN22550        --> ACCCTAATCTTGGACTTGTGAGCTGGTTAACTCTACCGATGTACGGCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759267       <-- ACCCTAATCTTGGACTTGTGAGCTGGTTAACTCTACCGATGTACGGCCTT
EV544670       <-- ACCCTAATCTTGGACTTGTGAGCTGGTTAACCCTACCGATGTACGGCCTT
EV542235       <-- ACCCTAATCTTGGACTTGTGAGCTGGTTAACTCTATCGATGTACGGCCTT
EY904154       <-- ACCCTAATCTTGGACTTGTGAGCTGGTTAACTCTACCGATGTACGGCCTT
FD528921       <-- ACCCCAATCTTGGACTTGTGAGCTGGTTAACTCTACCGATGTACGGCCTT
EV549135       --> ..................................................
EX754973       --> ..................................................
FD938335       --> ..................................................
FD981388       --> ..................................................
FD532454       --> ..................................................
FY431837       --> ..................................................
EX755108       --> ..................................................
EV538159       --> ..................................................
EX887296       --> ..................................................
EY908465       --> ACCCTAATCTTGGACTTGTGAGCTGGTTAACTCTACCGATGTACGGCCTT
EX765197       --> ...........................ggACTCTACCGATGTACGGCCTT

               1251   -   1301
UN22550        --> GATTTCGGGTGGGGCAAGGAGGTCCACATGGGACCATGCACGCATGACGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759267       <-- GATTTCGGGTGGG-CAAGGAGGTCCACATGGGACCATGCACGCATGACGG
EV544670       <-- GATTTCGGGTGGGGCAAGTAGGTCCACATGGGACCATGCACGCATGACGG
EV542235       <-- GATTTCGGGTGGGGCAAGGAGGTCCACATGGGACCATGCACGCATGACGG
EY904154       <-- GATTTCGGGTGGGGCAAGGAGGTCCACATGGGACCATGCACGCATGACGG
FD528921       <-- GATTTCGGGTGGGGCAAGGAGGTCCACATGGGACCATGCACGCATGACGG
EV549135       --> ..................................................
EX754973       --> ..................................................
FD938335       --> ..................................................
FD981388       --> ..................................................
FD532454       --> ..................................................
FY431837       --> ..................................................
EX755108       --> ..................................................
EV538159       --> ..................................................
EX887296       --> ..................................................
EY908465       --> GATTTCGGtg........................................
EX765197       --> GATTTCGGGTGGGGCAAGGAGGTCCACATGGGACCATGCACGCATGACGG

               1301   -   1351
UN22550        --> AGACGGGGGCTTTCTGCTACTGCCTGATAAAAATGATGACGGCTCGCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759267       <-- AGACGGGGGCTTTTTGCTACTGCCTGATAAAAATGATGACGGCTCGCTGA
EV544670       <-- AGGCGGGGGCTTTCTGCTACTGCCTGATAAAAATGATGACGGCTCACTGA
EV542235       <-- AGACGGGGGCTCTCTGCTACTGCCTGATAAAAATGATGACGGCTCGCTGA
EY904154       <-- AGACGGGGGCTCTCTGCTACTGCCTGATAAAAATGATGACGGCTCGCTGA
FD528921       <-- AGACGGGGGCTTTCTGCTACTGCCTGATAAAAATGATGACGGCTCGCTGA
EV549135       --> ..................................................
EX754973       --> ..................................................
FD938335       --> ..................................................
FD981388       --> ..................................................
FD532454       --> ..................................................
FY431837       --> ..................................................
EX755108       --> ..................................................
EV538159       --> ..................................................
EX887296       --> ..................................................
EY908465       --> ..................................................
EX765197       --> AGACGGGGGCTCTCTGCTACTGCCTGATAAAAATGATGACGGCTCGCTGA

               1351   -   1401
UN22550        --> TTCTCGCCACGTGTCTACAGGTAGCTCACATGGAGGCCTTCAAGAAACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759267       <-- TTCTCGCCACGTGTCTACAGGTAGCTTACATGGAGGCCTTCAAGAAACAT
EV544670       <-- TTCTCGCCACGTGTCTACAGGTAGCTCACATGGAGGCCCTCAAGAAACAT
EV542235       <-- TTCTCGCCACGTGTCTACAGGTAGCTCACATGGAGGCCTTCAAGAAACAT
EY904154       <-- TTCTCGCCACGTGTCTACAGGTAGCTCACATGGAGGCCTTCAAGAAACAT
FD528921       <-- TTCTCGCCACGTGTCTACAGGTAGCTCACATGGAGGCCTTCAAGAAACAT
EV549135       --> ..................................................
EX754973       --> ..................................................
FD938335       --> ..................................................
FD981388       --> ..................................................
FD532454       --> ..................................................
FY431837       --> ..................................................
EX755108       --> ..................................................
EV538159       --> ..................................................
EX887296       --> ..................................................
EY908465       --> ..................................................
EX765197       --> TTCTCGCCACGTGTCTACAGGTAGCTCACATGGAGGCCTTCAAGAAACAT

               1401   -   1451
UN22550        --> TTATATGAAGATATCTAGGGTTCTCTTAGTAAAAAAAGAAGAAGATATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759267       <-- TTATATGAAGATATCTAGGGTTCTCTTAGTAAAAAAAAAAGAAGATATCT
EV544670       <-- TTATATGAAGATATCTAGGGTTCTCTTAGTAAAAAAA-AAGAAGATATCT
EV542235       <-- TTATATGAAGATATCTAGGGTTGTCTTAGTAAAAAAAGAA---GATATCT
EY904154       <-- TTATATGAAGATATCTAGGGTTGTCTTAGTAAAAAAAGAA---GATATCT
FD528921       <-- TTATATGAAGATATCTAGGGTTCTCTTAGTAAAAAAA-AAGAAGATATCT
EV549135       --> ..................................................
EX754973       --> ..................................................
FD938335       --> ..................................................
FD981388       --> ..................................................
FD532454       --> ..................................................
FY431837       --> ..................................................
EX755108       --> ..................................................
EV538159       --> ..................................................
EX887296       --> ..................................................
EY908465       --> ..................................................
EX765197       --> TTATATGAAGATATCTAGGGTTCTCTTAGTAAAAAAAAAAGAAGATATCT

               1451   -   1501
UN22550        --> AGGGTTCTATATATACACACAAGTATTCATATATCTATGCATTTTCATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759267       <-- AGGGTTCTATATATACACACAAGTATTCATATATCTATGCATTT-CATTT
EV544670       <-- AGAGTTCTATATATACACACAAGTATTCATATATCTATGCATTTTCATTT
EV542235       <-- AGGGTTCTATATATACACACAAGTATTCATATATCTATGCATTTTCATTT
EY904154       <-- AGGGTTCTATATATACACACAAGTATTCATATATCTATGCATTTTCATTT
FD528921       <-- AGGGTTCTATATATACACACAAGTATTCATATATCTATGCATTTTCATTT
EV549135       --> ..................................................
EX754973       --> ..................................................
FD938335       --> ..................................................
FD981388       --> ..................................................
FD532454       --> ..................................................
FY431837       --> ..................................................
EX755108       --> ..................................................
EV538159       --> ..................................................
EX887296       --> ..................................................
EY908465       --> ..................................................
EX765197       --> AGGGTTCTATATATACACACAAGTATTCATATATCTATGCATTTTCATTT

               1501   -   1551
UN22550        --> CCATTTGAATAAGGATTCGAGTAGGGATTCTACTACTGTTGGTGTGATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759267       <-- CCATTTGAATAAGGATTCGAGTAGGGATTCTACTACTGTTGGTGTGATTC
EV544670       <-- CCATTTGAATAAGGATTCGAGTAAGGATTCTACTACTGTTGGTGTGATTC
EV542235       <-- CCATTTGAATAAGGATTCGAGTAGGGATTCTACTACTGTTGGTGTGATTC
EY904154       <-- CCATTTGAATAAGGATTCGAGTAGGGGTTCTACTACTGTTGGTGTGATTC
FD528921       <-- CCATTTTAATAAGGATTCGAGTAGGGATTCTACTACTGTTGGCGTGATTC
EV549135       --> ..................................................
EX754973       --> ..................................................
FD938335       --> ..................................................
FD981388       --> ..................................................
FD532454       --> ..................................................
FY431837       --> ..................................................
EX755108       --> ..................................................
EV538159       --> ..................................................
EX887296       --> ..................................................
EY908465       --> ..................................................
EX765197       --> CCATTTGAATAAGGATTCGAGTAGGGATTCTACTACTGTTGGTGTGATTC

               1551   -   1601
UN22550        --> TTGATTTGTATTAACAAATTTACACATATATAATTACACTTTATATTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759267       <-- TTGATTTGTATTAACAAATTTACACATATAT...................
EV544670       <-- TTGATTTGTATTAACA-TTTTACACATATATAATTACACTTTATATTTTT
EV542235       <-- TTGATTTGTATTAACAAATTTACACATATATAATTACACTTTATATT...
EY904154       <-- TTGATTTGTATTAACAAATTTACACATATATAATTACACTTTATATTTTT
FD528921       <-- TTGATTTGTATTAACAAATTTACACATATATAATTACACTTTATATTTTT
EV549135       --> ..................................................
EX754973       --> ..................................................
FD938335       --> ..................................................
FD981388       --> ..................................................
FD532454       --> ..................................................
FY431837       --> ..................................................
EX755108       --> ..................................................
EV538159       --> ..................................................
EX887296       --> ..................................................
EY908465       --> ..................................................
EX765197       --> TTGATTTGTATTAACAAATTTACACATATATAATTACACTTTATATTTTT

               1601   -   1651
UN22550        --> GCTTCC
                   ~~~~~~
EX759267       <-- ......
EV544670       <-- GCTTCC
EV542235       <-- ......
EY904154       <-- GCTT..
FD528921       <-- GCc...
EV549135       --> ......
EX754973       --> ......
FD938335       --> ......
FD981388       --> ......
FD532454       --> ......
FY431837       --> ......
EX755108       --> ......
EV538159       --> ......
EX887296       --> ......
EY908465       --> ......
EX765197       --> GCTT..