RadishBase

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Alignment for radish unigene UN22553

               1      -     51
UN22553        --> GGATATGAATTCACCACCAACTGCTGTTGTATTGGAAGAACAGCAAACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904249       <-- ..................................................
EV572714       <-- ..................................................
EX776009       <-- ..................................................
FD531537       <-- ..................................................
FD573881       <-- ..................................................
EY943135       <-- ..................................................
EY910083       <-- ..................................................
EV541993       <-- ..................................................
FD567417       <-- ..................................................
EY908577       --> GGATATGAATTCACCACCAACTGCTGTTGTATTGGAAGAACAGCAAACTT
FD535995       --> ..........ggACCACCAACTGCTGTTGTATTGGAAGAACAGCAAACTT
EV567865       --> ..................................................
EX771946       --> ..................................................
EY913941       --> ..................................................
FD569734       --> ..................................................
EY947194       --> ..................................................
EV537836       --> ..................................................
EX748390       --> ..................................................

               51     -    101
UN22553        --> AGTAGCTTTCATGTCCTCCTCAACTTCCTCAATCATTCACATTCTTTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904249       <-- ..................................................
EV572714       <-- ..................................................
EX776009       <-- ..................................................
FD531537       <-- ..................................................
FD573881       <-- ..................................................
EY943135       <-- ..................................................
EY910083       <-- ..................................................
EV541993       <-- ..................................................
FD567417       <-- ..................................................
EY908577       --> AGTAGCTTTCATGTCCTCCTCAACTTCCTCAATCATTCACATTCTTTTCT
FD535995       --> AGTAGCTTTCATGTCCTCCTCAACTTCCTCAATCATTCACATTCTTTTCT
EV567865       --> ..................................................
EX771946       --> ..................................................
EY913941       --> ..................................................
FD569734       --> ..................................................
EY947194       --> ..................................................
EV537836       --> ..................................................
EX748390       --> ..................................................

               101    -    151
UN22553        --> CCTACATTATACAATAACTCCTCTATATATGTATTATACATTTCTCATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904249       <-- ..................................................
EV572714       <-- ..................................................
EX776009       <-- ..................................................
FD531537       <-- ..................................................
FD573881       <-- ..................................................
EY943135       <-- ..................................................
EY910083       <-- ..................................................
EV541993       <-- ..................................................
FD567417       <-- ..................................................
EY908577       --> CCTACATTATACAATAACTCCTCTATATATGTATTATACATTTCTCATTA
FD535995       --> CCTACATTATACAATAACTCCTCTATATATGTATTATACATTTCTCATTA
EV567865       --> ..................................................
EX771946       --> ..................................................
EY913941       --> ..................................................
FD569734       --> ..................................................
EY947194       --> ..................................................
EV537836       --> ..................................................
EX748390       --> ..................................................

               151    -    201
UN22553        --> TTTGGAGAACCCTTCATTGTTGCATTTATTCATCGAGAAAATGAGGACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904249       <-- ..................................................
EV572714       <-- ..................................................
EX776009       <-- ..................................................
FD531537       <-- ..................................................
FD573881       <-- ..................................................
EY943135       <-- ..................................................
EY910083       <-- ..................................................
EV541993       <-- ..................................................
FD567417       <-- ..................................................
EY908577       --> TTTTCAGAACCCTTCATTGTTGCATTTATTCATCGAGAAAATGAGGACCA
FD535995       --> TTTTCAGAACCCTTCATTGTTGCATTTATTCATCGAGAAAATGAGGACCA
EV567865       --> ...GGAGAACCCTTCATTGTTGCATTTATTCATCGAGAAAATGAGGACCA
EX771946       --> ...GGAGAACCCTTCATTGTTGCATTTATTCATCGAGAAAATGAGGACCA
EY913941       --> ...GGAGAACCCTTCATTGTTGCATTTATTCATCGAGAAAATGAGGACCA
FD569734       --> ....GAGAACCCTTCATTGTTGCATTTATTCATCGAGAAAATGAGGACCA
EY947194       --> ......ggACCCTTCATTGTTGCATTTATTCATCGAGAAAATGAGGACCA
EV537836       --> .............ggATTGTTGCATTTATTCATCGAGAAAATGAGGACCA
EX748390       --> ..................................................

               201    -    251
UN22553        --> AATCCCAATCTTCTGTTAATCTGAAGGTCATATTCACATGTTGCTCAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904249       <-- ..................................................
EV572714       <-- ..................................................
EX776009       <-- ..................................................
FD531537       <-- ..................................................
FD573881       <-- ..................................................
EY943135       <-- ..................................................
EY910083       <-- ..................................................
EV541993       <-- ..................................................
FD567417       <-- ..................................................
EY908577       --> AATCCCAATCTTCTGTTAATCTGAAGGTCATATTCACATGTTGCTCAATC
FD535995       --> AATCCCAATCTTCTGTTAATCTGAAGGTCATATTCACATGTTGCTCAATC
EV567865       --> AATCCCAATCTTCTGTTAATCTGAAGGTCATATTCACATGTTGCTCAATC
EX771946       --> AATCCCAATCTTCTGTTAATCTGAAGGTCATATTCACATGTTGCTCAATC
EY913941       --> AATCCCAATCTTCTGTTAATCTGAAGGTCATATTCACATGTTGCTCAATC
FD569734       --> AATCCCAATCTTCTGTTAATCTGAAGGTCATATTCACATGTTGCTCAATC
EY947194       --> AATCCCAATCTTCTGTTAATCTGAAGGTCATATTCACATGTTGCTCAATC
EV537836       --> AATCCCAATCTTCTGTTAATCTGAAGGCCATATTCACATGTTGCTCAATC
EX748390       --> ..................................................

               251    -    301
UN22553        --> TTGATCTTTCTTGTCATCTTCTTTGCAAGATCAAACATCTCTTCTTCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904249       <-- ..................................................
EV572714       <-- ..................................................
EX776009       <-- ..................................................
FD531537       <-- ..................................................
FD573881       <-- ..................................................
EY943135       <-- ..................................................
EY910083       <-- ..................................................
EV541993       <-- ..................................................
FD567417       <-- ..................................................
EY908577       --> TTGATCTTTCTTGTCATCTTCTTTGCAAGATCAAACATCTCTTCTTCAAA
FD535995       --> TCGATCTTTCTTGTCATCTTCTTTGCAAGATCAAACATCTCTTCTTCAAA
EV567865       --> TTGATCTTTCTTGTCATCTTCTTTGCAAGATCAAACATCTCTTCTTCAAA
EX771946       --> TTGATCTTTCTTGTCATCTTCTTTGCAAGATCAAACATCTCTTCTTCAAA
EY913941       --> TTAATCTTTCTTGTCATCTTCTTTGCAAGATCAAACATCTCTTCTTCAAA
FD569734       --> TTGATCTTTCTTGTCATCTTCTTTGCAAGATCAAACATCTCTTCTTCAAA
EY947194       --> TTGATCTTTCTTGTCATCTTCTTTGCAAGATCAAACATCTCTTCTTCAAA
EV537836       --> TTGATCTTTCTTGTCATCTTCTTTGCAAGATCAAACATCTCTTCTTCAAA
EX748390       --> ..................................................

               301    -    351
UN22553        --> GCCCATCTCCAAAACCAATCTCTCTCAAGAGAAAGAAGAGCAAAACCAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904249       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV572714       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX776009       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD531537       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD573881       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY943135       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY910083       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV541993       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD567417       <-- ..................................................  Raphanus sativus var. oleiformis
EY908577       --> GCCCATCTCCAAAACCAATCTCTCTCAAGAGAAAGAAGAGCAAAACCAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD535995       --> GCCCATCTCCAGAACCAATCTCTCTCAAGAGAAAGAAGAGCAAAACCAGG  Raphanus raphanistrum subsp. maritimus
EV567865       --> GCCCATCTCCAGAACCAATCTCTCTCAAGAGAAAGAAGAGCAAAACCAGG  Raphanus raphanistrum subsp. landra
EX771946       --> GCCCATCTCCAGAACCAATCTCTCTCAAGAGAAAGAAGAGCAAAACCAGG  Raphanus raphanistrum subsp. landra
EY913941       --> GCCCATCTCCAAAACCAATCTCTCTCAAGAGAAAGAAGAGCAAAACCAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569734       --> GCCCATCTCCAAAACCAATCTCTCACAAGAGAAAGAAGAGCAAAACCAGG  Raphanus sativus cv Early Scarlet Globe
EY947194       --> GCCCATCTCCAAAACCAATCTCTCTCAAGAGAAAGAAGAGCAAAACCAGG  Raphanus sativus cv Rat-Tail Radish #3870
EV537836       --> GCCCATCTCCAAAACCAATCTCTCTCAAGAGAAAGAAGAGCAAAACCAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX748390       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               351    -    401
UN22553        --> CTACACCAGAAGGATGTCCAACAACACAACAATGCACGAAGATGCCAATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904249       <-- ..................................................
EV572714       <-- ..................................................
EX776009       <-- ..................................................
FD531537       <-- ..................................................
FD573881       <-- ..................................................
EY943135       <-- ..................................................
EY910083       <-- ..................................................
EV541993       <-- ..................................................
FD567417       <-- ..................................................
EY908577       --> CTACACCAGAAGGATGTCCAACAACACAACAATGCACGAAGATGCCAATT
FD535995       --> CTACACCAGAAGGATGTCCAACAACACAACAATGCACGAAGATGCCAATT
EV567865       --> CTACACCAGAAGGATGTCCAACAACACAACAATGCACGAAGATGCCAATT
EX771946       --> CTACACCAGAAGGATGTCCAACAACACAACAATGCACGAAGATGCCAATT
EY913941       --> CTACACCAGAAGGATGTCCAACAACACAACAATGCACGAAGATGCCAATT
FD569734       --> CTACACCAGAAGGATGTCCAACAACACAACAATGCACGAAGATGCCAATT
EY947194       --> CTACACCAGAAGGATGTCCAACAACACAACAATGCACGAAGATGCCAATT
EV537836       --> CTACACCAGAAGGATGTCCAACAACACAACAATGCACGAAGATGCCAATT
EX748390       --> ..................................................

               401    -    451
UN22553        --> TCTTTATCCGACGCGTTGGTTCACTACGCCACCAGTAACGTCACTCCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904249       <-- ........................TACGCCACCAGTAACGTCACTCCACA
EV572714       <-- ..................................................
EX776009       <-- ..................................................
FD531537       <-- ..................................................
FD573881       <-- ..................................................
EY943135       <-- ..................................................
EY910083       <-- ..................................................
EV541993       <-- ..................................................
FD567417       <-- ..................................................
EY908577       --> TCTTTATCCGACGCGTTGGTTCACTACGCCACCAGTAACGTCACTCCACA
FD535995       --> TCTTTATCCGACGCGTTGGTTCACTACGCCACCAGTAACGTCACTCCACA
EV567865       --> TCTTTATCCGACGCGTTGGTTCACTACGCCACCAGTAACGTCACTCCACA
EX771946       --> TCTT---CCGACGCGTTGGTTCACTACGCCACCAGTAACGTCACTCCACA
EY913941       --> TCTTTATCCGACGCGTTGGTTCACTACGCCACCAGTAACGTCACTCCACA
FD569734       --> TCTTTATCCGACGCGTTGGTTCACTACGCCACCAGTACCGTCACTCCACA
EY947194       --> TCTTTATCCGACGCGTTGGTTCACTACGCCACCAGTAACGTCACTCCACA
EV537836       --> TCTTTATCCGACGCGTTGGTTCACTACGCCACCAGTAACGTCACTCCACA
EX748390       --> ..................................................

               451    -    501
UN22553        --> ACAGACATTCGACGAAATCTCTGTCTCAAAGAGAGTCTTGGACAAGAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904249       <-- ACAGACATTCGATGAAATCTCTGTCTCAAAGAGAGTCTTGGACAAGAAGT
EV572714       <-- ..................................................
EX776009       <-- ..................................................
FD531537       <-- ..................................................
FD573881       <-- ..................................................
EY943135       <-- ..................................................
EY910083       <-- ..................................................
EV541993       <-- ..................................................
FD567417       <-- ..................................................
EY908577       --> ACAGACATTCGATGAAATCTCTGTCTCAAAGAGAGTCTTGGACAAGAAGT
FD535995       --> ACAGACATTCGACGAAATCTCTGTCTCAAAGAGAGTCTTGGACAAGAAGT
EV567865       --> ACAGACATTCGACGAAATCTCTGTCTCAAAGAGAGTCTTGGACAAGAAGT
EX771946       --> ACAGACATTCGACGAAATCTCTGTCTCAAAGAGAGTCTTGGACAAGAAGT
EY913941       --> ACAGACATTCGACGAAATCTCTGTCTCAAAGAGAGTCTTGGACAAGAAGT
FD569734       --> ACAGACATTCGACGAAATCTCTGTCTCAAAGAGAGTCTTGGACAAGAAGT
EY947194       --> ACAGACATTCGACGAAATCTCTGTCTCAAAGAGAGTCTTGGACAAGAAGT
EV537836       --> ACAGACATTCGATGAAATCTCTGTCTCAAAGAGAGTCTTGGACAAGAAGT
EX748390       --> ..................................................

               501    -    551
UN22553        --> CACCATGTAACTTCCTCGTCTTTGGTTTAGGTCACGACAGCCCGATGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904249       <-- CACCATGTAACTTCCTCGTCTTTGGTTTAGGTCACGACAGCCCGATGTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV572714       <-- ........AACTTCCTCGTCTTTGGTTTAGGTCACGATAGCCCGATGTGG  Raphanus raphanistrum subsp. landra
EX776009       <-- ..................TCTTTGGTTTAGGTCACGATAGCCCGATGTGG  Raphanus raphanistrum subsp. landra
FD531537       <-- .........................TTTAGGTCACGATAGCCCGATGTGG  Raphanus raphanistrum subsp. maritimus
FD573881       <-- ...............................TCACGACAGCCCGATGTGG  Raphanus sativus cv Early Scarlet Globe
EY943135       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY910083       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV541993       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD567417       <-- ..................................................  Raphanus sativus var. oleiformis
EY908577       --> CACCATGTAACTTCCTCGTCTTTGGTTTAGGTCACGACAGCCCGATGTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD535995       --> CACCATGTAACTTCCTCGTCTTTGGTTTAGGTCACGATAGCCCGATGTGG  Raphanus raphanistrum subsp. maritimus
EV567865       --> CACCATGTAACTTCCTCGTCTTTGGTTTAGGTCACGATAGCCCGATGTGG  Raphanus raphanistrum subsp. landra
EX771946       --> CACCATGTAACTTCCTCGTCTTTGGTTTAGGTCACGATAGCCCGATGTGG  Raphanus raphanistrum subsp. landra
EY913941       --> CACCATGTAACTTCCTCGTCTTTGGTTTAGGTCACGACAGCCCGATGTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569734       --> CACCATGTAACTTCCTCGTCTTTGGTTTAGGTCACGACAGCCCGATGTGG  Raphanus sativus cv Early Scarlet Globe
EY947194       --> CACCATGTAACTTCCTCGTCTTTGGTTTAGGTCACGACAGCCCGATGTGG  Raphanus sativus cv Rat-Tail Radish #3870
EV537836       --> CACCATGTAACTTCCTCGTCTTTGGTTTAGGTCACGACAGCCCGATGTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX748390       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               551    -    601
UN22553        --> GCTTCTCTCAACCATGGTGGTCGTACCTTGTTTATTGAGGAAGACAAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904249       <-- GCTTCTCTTAACCATGGTGGTCGTACCTTGTTTATTGAGGAAGACAAGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV572714       <-- GCTTCTCTCAACCATGGTGGTCGTACCTTGTTTATTGAGGAAGACAAGGC  Raphanus raphanistrum subsp. landra
EX776009       <-- GCTTCTCTCAACCATGGTGGTCGTACCTTGTTTATTGAGGAAGACAAGGC  Raphanus raphanistrum subsp. landra
FD531537       <-- GCTTCTCTCAACCATGGTGGTCGTACCTTGTTTATTGAGGAAGACAAGGC  Raphanus raphanistrum subsp. maritimus
FD573881       <-- GCTTCTCTCAACCATGGTGGTCGTACCTTGTTTATTGAGGAAGACAAGGC  Raphanus sativus cv Early Scarlet Globe
EY943135       <-- ..............................TTTATTGAGGAAGACAAGGC  Raphanus sativus cv Rat-Tail Radish #3870
EY910083       <-- ...............................TTATTGAGGAAGACAAGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV541993       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD567417       <-- ..................................................  Raphanus sativus var. oleiformis
EY908577       --> GCTTCTCTTAACCATGGTGGTCGTACCTTGTTTATTGAGGAAGACA....  Raphanus raphanistrum subsp. raphanistrum (MS)
FD535995       --> GCTTCTCTCAACCATGGTGGTCGTACCTTGTTTATTGAGGAAGACAAGGC  Raphanus raphanistrum subsp. maritimus
EV567865       --> GCTTCTCTCAACCATGGTGGTCGTACCTTGTTTATTGAGGA.........  Raphanus raphanistrum subsp. landra
EX771946       --> GCTTCTCTCAACCATGGTGGTCGTACCTTGTTTATTGAGGAAGACAAGGC  Raphanus raphanistrum subsp. landra
EY913941       --> GCTTCTCTCAACCATGGTGGTCGTACCTTGTTTATTGAGGAAGACAAGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569734       --> GCTTCTCTCAACCATGGTGGTCGTACCTTGTTTATTGAGGAAGACAAGGC  Raphanus sativus cv Early Scarlet Globe
EY947194       --> GCTTCTCTCAACCATGGTGGTCGTACCTTGTTTATTGAGGAAGACAAGGC  Raphanus sativus cv Rat-Tail Radish #3870
EV537836       --> GCTTCTCTTAACCATGGTGGTCGTACCTTGTTTATTGAGGAAGACAAGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX748390       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               601    -    651
UN22553        --> TTGG-ATTGAGATAGTGACTAAGAAATTCCC-AAGCTTGGAAGCTTACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904249       <-- TTGG-ATTGAGATAGTGACTAAGAAATTCCC-AAGCTTGGAAGCTTACCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV572714       <-- CTGG-ATCGAGATAGTGACCAAGAAATTCCC-AAGCTTGGAAGCTTACCA  Raphanus raphanistrum subsp. landra
EX776009       <-- CTGG-ATCGAGATAGTGACCAAGAAATTCCC-AAGCTTGGAAGCTTACCA  Raphanus raphanistrum subsp. landra
FD531537       <-- CTGG-ATCGAGATAGTGACCAAGAAATTCCC-AAGCTTGGAAGCTTACCA  Raphanus raphanistrum subsp. maritimus
FD573881       <-- TTGG-ATTGAGATAGTGACTAAGAAATTCCC-AAGCTTGGAAGCTTACCA  Raphanus sativus cv Early Scarlet Globe
EY943135       <-- TTGG-ATTGAGATAGTGACTAAGAAATTCCC-AAGCTTGGAAGCTTACCA  Raphanus sativus cv Rat-Tail Radish #3870
EY910083       <-- TTGG-ATTGAGATAGTGACTAAGAAATTCCC-AAGCTTGGAAGCTTACCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV541993       <-- ....................AAGAAATTCCCCAAGCTTGGAAGCTTACCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD567417       <-- ..................................................  Raphanus sativus var. oleiformis
EY908577       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD535995       --> CTGGGATCGAGATAGTGACCAAGAAATTCCC-AAGCTTGGAAGCTTACCA  Raphanus raphanistrum subsp. maritimus
EV567865       --> ..................................................  Raphanus raphanistrum subsp. landra
EX771946       --> CTGG-ATCGAGATAGTGACCAAGAAATTCCC-AAGCTTGGAAGCTTACCA  Raphanus raphanistrum subsp. landra
EY913941       --> TTGG-ATTGAGATAGTGACTAAGAAATTCCC-AAGCTTGGAAGCTTACCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569734       --> TTGG-ATTGAGATAGTGACTAAGAAATTCCC-AAGCTTGGAAGCTTACCA  Raphanus sativus cv Early Scarlet Globe
EY947194       --> TTGG-ATTGAGATAGTGACTAAGAAATTCCC-AAGCTTGGAAGCTTACCA  Raphanus sativus cv Rat-Tail Radish #3870
EV537836       --> TTGG-ATTGAGATAGTGACTAAGAAATTCCC-AAGCTTGGAAGCTTACCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX748390       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               651    -    701
UN22553        --> CGTCGTTTACGACACGAAAGTGAAACATTCAGACAAACTGATGGAGCTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904249       <-- CGTCGTTTACGACACGAAACTGAAACATTCAGACAAACTGATGGAGCTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV572714       <-- CGTCGTTTACGACACGAAAGTGAAACATTCAGACAAACTGATGGAGCTAG  Raphanus raphanistrum subsp. landra
EX776009       <-- CGTCGTTTACGACACGAAAGTGAAACATTCAGACAAACTGATGGAGCTAG  Raphanus raphanistrum subsp. landra
FD531537       <-- CGTCGTTTACGACACGAAAGTGAAACATTCAGACAAACTGATGGAGCTAG  Raphanus raphanistrum subsp. maritimus
FD573881       <-- CGTCGTTTACGACACGAAAGTGAAACATTCAGACAAACTGATGGAGCTAG  Raphanus sativus cv Early Scarlet Globe
EY943135       <-- CGTCGTTTACGACACGAAAGTGAAACATTCAGATAAACTGATGGAGCTGG  Raphanus sativus cv Rat-Tail Radish #3870
EY910083       <-- CGTCGTTTACGACACGAAAGTGAAACATTCAGACAAACTGATGGAGCTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV541993       <-- CGTCGTTTACGACACGAAACTGAAACATTCAGACAAACTGATGGAGCTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD567417       <-- ..................................................  Raphanus sativus var. oleiformis
EY908577       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD535995       --> CGTCGTTTACGACACGAAAGTGAAACATTCAGACAAACTGATGGAGCTAG  Raphanus raphanistrum subsp. maritimus
EV567865       --> ..................................................  Raphanus raphanistrum subsp. landra
EX771946       --> CGTCGTTTACGACACGAAAGTGAAACATTCAGACAAACTGATGGAGCTAG  Raphanus raphanistrum subsp. landra
EY913941       --> CGTCGTTTACGACACGAAAGTGAAACATTCAGACAAACTGATGGAGCTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569734       --> CGTCGTTTACGACACGAAAGTGAAACATTCAGACAAACTGATGGAGCTAG  Raphanus sativus cv Early Scarlet Globe
EY947194       --> CGTCGTTTACGACACGAAAGTGAAACATTCAGATAAACTGATGGAGCTGG  Raphanus sativus cv Rat-Tail Radish #3870
EV537836       --> CGTCGTTTACGACACGAAACTGAAACATTCAGACAAACTGATGGAGCTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX748390       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               701    -    751
UN22553        --> GAAGATCAGAGGAGTGCAGATCCGTGACCGATCCAAGAAACTCGAAATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904249       <-- GAAGATCAGAGGAGTGTAGATCCGTGACCGATCCAAGAAACTCGAAATGT
EV572714       <-- GAAGATCAGAGGAGTGCAGATCCGTGACCGATCCAAGAAACTCGAAATGT
EX776009       <-- GAAGATCAGAGGAGTGCAGATCCGTGACCGATCCAAGAAACTCGAAATGT
FD531537       <-- GAAGATCAGAGGAGTGCAGATCCGTGACCGATCCAAGAAACTCGAAATGT
FD573881       <-- GAAGATCAGAGGAGTGCAGATCCGTGACCGATCCAAGAAACTCGAAATGT
EY943135       <-- GAAGATCAGAGGAGTGCAGATCCGTGACCGATCCAAGAAACTCGAAATGT
EY910083       <-- GAAGATCCGAGGAGTGCAGATCCGTGACCGATCCAAGAAACTCGAAATGT
EV541993       <-- GAAGATCAGAGGAGTGTAGATCCGTGACCGATCCAAGAAACTCGAAATGT
FD567417       <-- ..................................................
EY908577       --> ..................................................
FD535995       --> GAAGATCAGAGGAGTGCAGATCCGTGACCGATCCAAGAA-CTCGAAATGT
EV567865       --> ..................................................
EX771946       --> GAAGATCAGAGGAGTGCAGATCCGTGACCGATCCAAGAAACTCGAAATGT
EY913941       --> GAAGATCCGAGGAGTGCAGATCCGTGACCGATCCAAGAAACTCGAAATGT
FD569734       --> GAAGATCAGAGGAGTGCAGATCCGTGACCGATCCAAGAAACTCGAAATGT
EY947194       --> GAAGATCAGAGGAGTGCAGATCCGTGACCGATCCAAGAAACTCGAAATGT
EV537836       --> GAAGATCAGAGGAGTGTAGATCCGTGACCGATCCAAGAAACTCGAAATGT
EX748390       --> ..................................................

               751    -    801
UN22553        --> GAACTATCGTTGAAAGATTTCCCGGCCGATTTTTACGAGACGAAATGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904249       <-- GAACTATCGTTGAAAGATTTCCCGGCCGATTTTTACGAGACGAAATGGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV572714       <-- GAACTATCGTTGAAAGATTTCCCGGCCGATTTTTACGAGACGAAATGGGA  Raphanus raphanistrum subsp. landra
EX776009       <-- GAACTATCGTTGAAAGATTTCCCGGCCGATTTTTACGAGACGAAATGGGA  Raphanus raphanistrum subsp. landra
FD531537       <-- GAACTATCGTTGAAAGATTTCCCGGCCGATTTTTACGAGACGAAATGGGA  Raphanus raphanistrum subsp. maritimus
FD573881       <-- TAACTATCGTTGAAAGATTTCCCGGCCGATTTTTACGAGACGAAATGGGA  Raphanus sativus cv Early Scarlet Globe
EY943135       <-- GAACTATCGTTGAAAGATTTCCCGGCGGATTTTTACGAGACGAAATGGGA  Raphanus sativus cv Rat-Tail Radish #3870
EY910083       <-- GAACTATCGTTGAAAGATTTCCCGGCGGATTTTTACGAGACGAAATGGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV541993       <-- GAACTATCGTTGAAAGATTTCCCGGCCGATTTTTACGAGACGAAATGGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD567417       <-- ..................................................  Raphanus sativus var. oleiformis
EY908577       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD535995       --> GA-CTATCGTTGA.....................................  Raphanus raphanistrum subsp. maritimus
EV567865       --> ..................................................  Raphanus raphanistrum subsp. landra
EX771946       --> GAACTATCGTTGAAAGATTTCCCGGCCGATTTTTACGAGACGAAATGGGA  Raphanus raphanistrum subsp. landra
EY913941       --> GAACTATCGTTGAAAGATTTCCCGGCGGATTTTTACGAGACGAAATGGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569734       --> TAACTATCGTTGAAAGATTTCCCGGCCGATTTTTACGAGACGAAATGGGA  Raphanus sativus cv Early Scarlet Globe
EY947194       --> GAACTATCGTTGAAAGATTTCCCGGCGGATTTTTACGAGACGAAATGGGA  Raphanus sativus cv Rat-Tail Radish #3870
EV537836       --> GAACTATCGTTGAAAGATTTCCCGGCCGATTTTTACGAGACGAAATGGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX748390       --> .............................TTTTTACGAGACGAAATGGGA  Raphanus raphanistrum subsp. maritimus

               801    -    851
UN22553        --> TCTGATCATGGTGGATGCTCCGACTGGTTACCACGAGGAAGCTCCGGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904249       <-- TCTGATCATGGTGGATGCTCCGACTGGTTACCACGAGGAAGCTCCGGGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV572714       <-- TCTGATCATGGTCGATGCTCCGACTGGTTACCACGAGGAAGCTCCGGGGA  Raphanus raphanistrum subsp. landra
EX776009       <-- TCTGATCATGGTCGATGCTCCGACTGGTTACCACGAGGAAGCTCCGGGGA  Raphanus raphanistrum subsp. landra
FD531537       <-- TCTGATCATGGTCGATGCTCCGACTGGTTACCACGAGGAAGCTCCGGGGA  Raphanus raphanistrum subsp. maritimus
FD573881       <-- TCTGACCATGGTGGATGCTCCGACTGGTTACCACGAGGAAGCTCCGGGGA  Raphanus sativus cv Early Scarlet Globe
EY943135       <-- TCTGATCATGGTGGATGCTCCCACTGGTTACCACGAGGAAGCTCCGGGGA  Raphanus sativus cv Rat-Tail Radish #3870
EY910083       <-- TCTGATCATGGTGGATGCTCCCACTGGTTACCACGAGGAAGCTCCGGGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV541993       <-- TCTGATCATGGTGGATGCTCCGACTGGTTACCACGAGGAAGCTCCGGGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD567417       <-- ..................................................  Raphanus sativus var. oleiformis
EY908577       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD535995       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV567865       --> ..................................................  Raphanus raphanistrum subsp. landra
EX771946       --> TCTGATCATGGTCGATGCTCCGACTGGTTACCACGAGGAAGCTCCGGGGA  Raphanus raphanistrum subsp. landra
EY913941       --> TCTGATCATGGTGGATGCTCCCACTGGTTACCACGAGGAAGCTCCGGG-A  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569734       --> TCTGACCATGGTGGATGCTCCGACTGGTTACCACGAGGAAGCTCCGGGGA  Raphanus sativus cv Early Scarlet Globe
EY947194       --> TCTGATCATGGTGGATGCTCCCACTGGTTACCACGAGGAAGCTCCGGGGA  Raphanus sativus cv Rat-Tail Radish #3870
EV537836       --> TCTGATCATGGTGGATGCTCCGACTGGTTACCACGAGGAAGCTCCGGGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX748390       --> TCTGATCATGGTCGATGCTCCGACTGGTTACCACGAGGAAGCTCCGGGGA  Raphanus raphanistrum subsp. maritimus

               851    -    901
UN22553        --> GGATGAGTGCTATTTACACGGCGGGGCTTTTGGCTCGTAACCGCGAAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904249       <-- GGATGAGTGCTATTTACACGGCGGGGCTTTTGGCTCGTAACCGCGAAGAC
EV572714       <-- GGATGAGTGCTATTTACACGGCGGGGCTTTTGGCTCGTAACCGCGAAGAC
EX776009       <-- GGATGAGTGCTATTTACACGGCGGGGCTTTTGGCTCGTAACCGCGAAGAC
FD531537       <-- GGATGAGTGCTATTTACACGGCGGGGCTTTTGGCTCGTAACCGCGAAGAC
FD573881       <-- GGATGAGTGCTATTTACACGGCGGGGCTTTTGGCTCGTAACCGCGAAGAC
EY943135       <-- GGATGAGTGCTATTTACACGGCGGGGCTTTTGGCTCGTAACCGCGAAGAC
EY910083       <-- GGATGAGTGCTATTTACACGGCGGGGCTTTTGGCTCGTAACCGCGAAGAC
EV541993       <-- GGATGAGTGCTATTTACACGGCGGGGCTTTTGGCTCGTAACCGCGAAGAC
FD567417       <-- ..................................................
EY908577       --> ..................................................
FD535995       --> ..................................................
EV567865       --> ..................................................
EX771946       --> GGATGAGTGCTATTTA..................................
EY913941       --> GGATGAGTGCTATTTAC.................................
FD569734       --> GGATGAGTGCTATTTACACGGCGGGGCTTTTGGCTCG.............
EY947194       --> GGATGAGTGCTATTTACACGGCGGGGCTTTTGGCTCGTAACCGCGAAGAC
EV537836       --> GGATGAGTGCTATTTACACGGCGGGGCTTTTGGCTCGTAACCGCGAAGAC
EX748390       --> GGATGAGTGCTATTTACACGGCGGGGCTTTTGGCTCGTAACCGCGAAGAC

               901    -    951
UN22553        --> GGAGAAACAGACGTTTTTGTTCACGACGTTAACCGTCCGGTGGAAGATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904249       <-- GGAGAAACAGACGTTTTTGTTCATGACGTTAACCGTCCGGTGGAAGATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV572714       <-- GGAGAGACAGACGTTTTTGTTCACGACGTTAACCGTCCTGTGGAAGATGA  Raphanus raphanistrum subsp. landra
EX776009       <-- GGAGAGACAGACGTTTTTGTTCACGACGTTAACCGTCCTGTGGAAGATGA  Raphanus raphanistrum subsp. landra
FD531537       <-- GGAGAGACAGACGTTTTTGTTCACGACGTTAACCGTCCTGTGGAAGATGA  Raphanus raphanistrum subsp. maritimus
FD573881       <-- GGAGAAACAGACGTTTTTGTTCATGACGTTAACCGTCCGGTGGAAGATGA  Raphanus sativus cv Early Scarlet Globe
EY943135       <-- GGAGAAACAGACGTTTTTGTTCACGACGTTAACCGTCCGGTGGAAGATGA  Raphanus sativus cv Rat-Tail Radish #3870
EY910083       <-- GGAGAAACAGACGTTTTTGTTCATGACGTTAACCGTCCGGTGGAAGATGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV541993       <-- GGAGAAACAGACGTTTTTGTTCATGACGTTAACCGTCCGGTGGAAGATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD567417       <-- ..................................................  Raphanus sativus var. oleiformis
EY908577       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD535995       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV567865       --> ..................................................  Raphanus raphanistrum subsp. landra
EX771946       --> ..................................................  Raphanus raphanistrum subsp. landra
EY913941       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569734       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY947194       --> G-AGAAACAGACGTTTTTGTTCACGACGTTAAC.................  Raphanus sativus cv Rat-Tail Radish #3870
EV537836       --> GGAGA.............................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX748390       --> GGAGAGACAGACGTTTTTGTTCACGACGTTAACCGTCCTGTGGAAGATGA  Raphanus raphanistrum subsp. maritimus

               951    -   1001
UN22553        --> GTTCTCGGCGACTTTCTTGTGTAAAGGTTACATGAGGGAGCAAAACGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904249       <-- GTTCTCGGCGACTTTCTTGTGTAAAGGTTACATGGGGGAGCAAAACGGGA
EV572714       <-- GTTCTCGGCGACTTTCTTGTGTAAAGGTTACATGAGGGAGCAAAACGGGA
EX776009       <-- GTTCTCGGCGACTTTCTTGTGTAAAGGTTACATGAGGGAGCAAAACGGGA
FD531537       <-- GTTCTCGGCGACTTTCTTGTGTAAAGGTTACATGAGGGAGCAAAACGGGA
FD573881       <-- GTTCTCGGCGACTTTCTTGTGTAAAGGTTACATGAGGGAGCAAAACGGGA
EY943135       <-- GTTTTCGGCGACGTTTTTGTGTAAAGGTTACATGAGGGAGCAAAACGGGA
EY910083       <-- GTTCTCGGCGACGTTCTTGTGTAAAGGTTACATGAGGGAGCAAAACGGGA
EV541993       <-- GTTTTCGGCGACTTTCTTGTGTAAAGGCTACATGAGGGAGCAAAACGGGA
FD567417       <-- ..................................................
EY908577       --> ..................................................
FD535995       --> ..................................................
EV567865       --> ..................................................
EX771946       --> ..................................................
EY913941       --> ..................................................
FD569734       --> ..................................................
EY947194       --> ..................................................
EV537836       --> ..................................................
EX748390       --> GTTCTCGGCGACTTTCTTGTGTAAAGGTTACATGAGGGAGCAAAACGGGA

               1001   -   1051
UN22553        --> GGCTAAGGCATTTCACCATCCCTAGCCATCGGGCTCGTGCTGGCAGACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904249       <-- GGCTAAGGCATTTCACCATCCCTAGCCATCGGGCACGTGCTGGCAGACCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV572714       <-- GGCTAAGGCATTTCACAATCCCTAGCCATCGGGCTCGTGCTGGCAGACCG  Raphanus raphanistrum subsp. landra
EX776009       <-- GGCTAAGGCATTTCACAATCCCTAGCCATCGGGCTCGTGCTGGCAGACCG  Raphanus raphanistrum subsp. landra
FD531537       <-- GGCTAAGGCATTTCACAATCCCTAGCCATCGGGCTCGTGCTGGCAGACCG  Raphanus raphanistrum subsp. maritimus
FD573881       <-- GGCTAAGGCATTTCACCATCCCTAGCCATCGGGCTCGTGCTGGCAGACCG  Raphanus sativus cv Early Scarlet Globe
EY943135       <-- GGCTAAGGCATTTCACCATCCCTAGCCATCGGGCTCGTGCTGGCAGACCG  Raphanus sativus cv Rat-Tail Radish #3870
EY910083       <-- GGCTAAGGCATTTCACCATCCCTAGCCATCGGGCTCTTGCTGGCAGACCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV541993       <-- GGCTAAGGCATTTCACCATCCCTAGCCATCGGGCACGTGCTGGCAGACCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD567417       <-- ....AAGGCATTTCACCATCCCTAGCCATCGGGCTCGTGCTGGCAGACCG  Raphanus sativus var. oleiformis
EY908577       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD535995       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV567865       --> ..................................................  Raphanus raphanistrum subsp. landra
EX771946       --> ..................................................  Raphanus raphanistrum subsp. landra
EY913941       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569734       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY947194       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV537836       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX748390       --> GGCTAAGGCATTTCACAATCCCTAGCCATCGGGCTCGTGCTGGCAGACCG  Raphanus raphanistrum subsp. maritimus

               1051   -   1101
UN22553        --> TTTTGTCCGGTGGATGTTAATCGCCGCCGTTGATTTTGTGCCGGGAAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904249       <-- TTTTGTCCGGTGGATGTTAATCGCCGCCGTTGATTTTGTGCCGGGAAATA
EV572714       <-- TTTTGTCCGGTGGATGTTAATCGCCGCCGTTGATTTCGTGCCGGGAAATA
EX776009       <-- TTTTGTCCGGTGGATGTTAATCGCCGCCGTTGATTTTGTGCCGGGAAATA
FD531537       <-- TTTTGTCCGGTGGATGTTAATCGCCGCCGTTGATTTTGTGCCGGGAAATA
FD573881       <-- TTTTGTCCGGTGGATGTTAATAGCCGCTGTTGATTTTGTGCCGGGAAATA
EY943135       <-- TTCTGTCCAGTGGATGTTAATCGCCGCCGTTGATTTTGTGCCGGGAAATA
EY910083       <-- TTTTGTCCAGTGGATGTTAATCGCCGCCGTTGATTTTGTGCCGGGAAATA
EV541993       <-- TTTTGTCCGGTGGATGTTAATCGCCGCCGTTGATTTTGTGCCGGGAAATA
FD567417       <-- TTTTGTCCAGTGGATGTTAATCGCCGCCGTTGATTTTGTGCCGGGAAATA
EY908577       --> ..................................................
FD535995       --> ..................................................
EV567865       --> ..................................................
EX771946       --> ..................................................
EY913941       --> ..................................................
FD569734       --> ..................................................
EY947194       --> ..................................................
EV537836       --> ..................................................
EX748390       --> TTTTGTCCGGTGGATGTTAATCGCCGCCGTTGATTTTGTGCCGGGAAATA

               1101   -   1151
UN22553        --> TCTCTGCGTT-GTGGACCAAGAGTGACTATGCTTAGCTGGCTTTTTGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904249       <-- TCTTTGCGTT-GCGGACCAAGAGTGACTATGCTTAGCTGGCTTTTTGTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV572714       <-- TCTCTGTGTT-GTGGACCAAGAGTGACTATGCTTAGCTGGCTTTTTGTTT  Raphanus raphanistrum subsp. landra
EX776009       <-- TCTCTGTGTT-GTGGACCAAGAGTGACTATGCTTAGCTGGCTTTTTGTTT  Raphanus raphanistrum subsp. landra
FD531537       <-- TCTTTGTGTT-GTGGACCAAGAGTGACTATGCTTAGCTGGCTTTTTGTTT  Raphanus raphanistrum subsp. maritimus
FD573881       <-- TCTCTGCGTTTATGGACCCAGAGTGACTATGCTTAGCTGGCTTTTTGTTT  Raphanus sativus cv Early Scarlet Globe
EY943135       <-- TTTTTGCGTT-GTGGACCCAGAGTGACTATGCTTAGCTGGCTTTTTGTTT  Raphanus sativus cv Rat-Tail Radish #3870
EY910083       <-- TCTCTGCGTT-GTGGACCCAGAGTGACTATGCTTAGCTGGCTTTTTGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV541993       <-- TCTCTGCGTT-GCGGACCAAGAGTGACTATGCTTAGCTGGCTTTTTGTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD567417       <-- TCTTTGCGTT-GTGGACCCAGAGTGACTATGCTTAGCTGGCTTTTTGTTT  Raphanus sativus var. oleiformis
EY908577       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD535995       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV567865       --> ..................................................  Raphanus raphanistrum subsp. landra
EX771946       --> ..................................................  Raphanus raphanistrum subsp. landra
EY913941       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569734       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY947194       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV537836       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX748390       --> TCTCTGTGTT-GTGGACCAAGAGTGACTATGCTTAGCTGGCTTTTTGTTT  Raphanus raphanistrum subsp. maritimus

               1151   -   1201
UN22553        --> GTTTGTTTTTGCTTTTATCTTGATGATTACGTTTTTTT-ATGGATTCAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904249       <-- GTTTGTTTTTGCTTTTATCTTGATGATTACGTTTTTTT-ATGGATTCAGT
EV572714       <-- GTTTGTTTTTGCTTTTATCTTGATGATTACGTTTTTTT-ATGGATTCAGT
EX776009       <-- GTTTGTTTTTGCTTTTATCTTGATGATTACGTTTTTTT-ATGGATTCAGT
FD531537       <-- GTTTGTTTTTGCTTTTATCTTGATGATTACGTTTTTTT-ATGGATTCAGT
FD573881       <-- GTTTGTTTTTGCTTTTATCTTGATGATTACGTTTTTTT-ATGGATTCAGT
EY943135       <-- GTTTGTTTTTGCTTTTATCTTGATGATTACGTTTTTTTTATGGATTCAGT
EY910083       <-- GTTTGTTTTTGCTTTTATCTTGATGATTACGTTTTTTT-ATGGATTCAGC
EV541993       <-- GTTTGTTTTTGCTTTTATCTTGATGATTACGTTTTTTT-ATGGATTCAGT
FD567417       <-- GTTTGTTTTTGCTTTTATCTTGATGATTACGTTTTTTT-ATGGATTCAGT
EY908577       --> ..................................................
FD535995       --> ..................................................
EV567865       --> ..................................................
EX771946       --> ..................................................
EY913941       --> ..................................................
FD569734       --> ..................................................
EY947194       --> ..................................................
EV537836       --> ..................................................
EX748390       --> GTTTGTTTTTGCTTTTATCTTGATGATTACGTTTTTTT-ATGGATTCAGT

               1201   -   1251
UN22553        --> GCATTTACTGAAACGCTATAGTAAAATAGTATTCTTCATATAATTATTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904249       <-- GCATTTACTGAAACGCTATAGTAAAATAGTATTCTTCATAT.........
EV572714       <-- GCATTTACTGAAACGCTATAGTAAAATAGTATTCTTCATATAATTATTTG
EX776009       <-- GCATTTACTGAAACGCTATAGTAAAATAGTATTCTTCATATAATTATTTG
FD531537       <-- GCATTTACTGAAACGCTATAGTAAAATAGTATTCTTCATATAATTATTTG
FD573881       <-- GCATTTACTGAAACGCTATAGTAAAATAGTATTCTTCATATAATTATTTG
EY943135       <-- GCATTTACTGAAACGCTATAGTAAAATAGTATTCTTCGTAT.........
EY910083       <-- GCATTTACTGAAACGCTATAGTAAAATAGTATTCTTCATATAATTATTTG
EV541993       <-- GCATT--TTGAAACGCTATAGTAAAATAGTATTCTTCATATAATTATTTG
FD567417       <-- GCATTTACTGAAACGCTATAGTAAAATAGTATTCTTCATATAATTATTTG
EY908577       --> ..................................................
FD535995       --> ..................................................
EV567865       --> ..................................................
EX771946       --> ..................................................
EY913941       --> ..................................................
FD569734       --> ..................................................
EY947194       --> ..................................................
EV537836       --> ..................................................
EX748390       --> GCATTTACTGAAACGCCATAGTAAAATAGTATTCTTCATATAATTATTTG

               1251   -   1301
UN22553        --> AATACAAAATAATGAATTACCAGATATGTTCTTTTTGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904249       <-- .......................................
EV572714       <-- AATACAAAATAATGAATTACCtg................
EX776009       <-- AATACAAAATAATGAATTACC..................
FD531537       <-- AATACAAAATAATGAATTACCAG................
FD573881       <-- AATACAAAATAATGAATTACC..................
EY943135       <-- .......................................
EY910083       <-- AATACAAAATAATGAATTACC..................
EV541993       <-- AATACAAAATAATGAAT......................
FD567417       <-- AATA-AAAATAATGAATTACCAGATATGTTCTTTTTGCC
EY908577       --> .......................................
FD535995       --> .......................................
EV567865       --> .......................................
EX771946       --> .......................................
EY913941       --> .......................................
FD569734       --> .......................................
EY947194       --> .......................................
EV537836       --> .......................................
EX748390       --> AATACA.................................