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Alignment for radish unigene UN22558

               1      -     51
UN22558        --> GGGTCCATCTGTTTCTCGGGGAGATTTAGTTGCGAAGAAGAACGAGCTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776002       <-- ......................................gagACGAGCTTA  Raphanus raphanistrum subsp. landra
FD942312       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX892553       <-- ..................................................  Raphanus sativus var. oleiformis
EX888654       --> GGGTCCATCTGTTTCTCTCGGAGATTTAGTTGCGAAGAAGAACGAGCTTA  Raphanus sativus var. oleiformis
EV525316       --> .................GGGGAGATTTGGTTGCGAAGAAGAACGAGCTTA  Raphanus raphanistrum subsp. maritimus
EW731914       --> .................GGGGAGATTTGGTTGCGAAGAAGAACGAGCTTA  Raphanus sativus cv Rat-Tail Radish #3870
EY938480       --> .................GGGGAGATTTAGTTGCGAAGAAGAACGAGCTTA  Raphanus sativus cv Early Scarlet Globe
FD561304       --> .................GGGGAGATTTAGTTGCGAAGAAGAACGAGCTTA  Raphanus sativus var. oleiformis
EX771936       --> ................gtGGGAGATTTAGTTGCGAAGAAGAACGAGCTTA  Raphanus raphanistrum subsp. landra
EY897394       --> ...............gctcGGAGATTTGGTTGCGAAGAAGAACGAGCTTA  Raphanus raphanistrum subsp. maritimus
EY923231       --> ..................................................  Raphanus raphanistrum subsp. landra

               51     -    101
UN22558        --> AGATTTTGATTCAGGTGGAGATTTAATCAGACAGTGATTATGGAGAGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776002       <-- AGATTT-GA-TCA-GTGGAGATTTA-TCATACAGTGATTATG-AGAGTGA  Raphanus raphanistrum subsp. landra
FD942312       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX892553       <-- ..................................................  Raphanus sativus var. oleiformis
EX888654       --> AGATTTTGATTCAGGTGGAGATTTAATCAGACAGTGATTATGGAGAGTGA  Raphanus sativus var. oleiformis
EV525316       --> AGATTTTGATTCAGGTGGAGATTTAATCAG---TTGATTATGGAGAGTGA  Raphanus raphanistrum subsp. maritimus
EW731914       --> AGATTTTGATTCAGGTGGAGATTTGATCAG---TTGATTATGGAGAGTGA  Raphanus sativus cv Rat-Tail Radish #3870
EY938480       --> AGATTTTGATTCAGGTGGAGATTTAATCAGACAGTGATTATGGAGAGTGA  Raphanus sativus cv Early Scarlet Globe
FD561304       --> AGATTTTGATTCAGGTGGAGATTTAATCAGACAGTGATTATGGAGAGTGA  Raphanus sativus var. oleiformis
EX771936       --> AGATTTTGATTCAGGTGGAGATTTAATCATACAGTGATTATGGAGAGTGA  Raphanus raphanistrum subsp. landra
EY897394       --> AGATTTTGATTCAGGTGGAGATTTAATCAG---TTGATTATGGAGAGTGA  Raphanus raphanistrum subsp. maritimus
EY923231       --> ..................................................  Raphanus raphanistrum subsp. landra

               101    -    151
UN22558        --> AACGAAACCAACCTTCAGCAAATCAACAGGGCTTCCACGCAAGCGATTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776002       <-- AACGAAACCAA--CTCAGCAAATCAACAG-TC-TCCACGTAAGCGAT-CT  Raphanus raphanistrum subsp. landra
FD942312       <-- ...........CCTTCAGCAAATCAACAGGTCTTCCACGTAAGCGATTCT  Raphanus sativus cv Early Scarlet Globe
EX892553       <-- ..................................................  Raphanus sativus var. oleiformis
EX888654       --> AACGAAACCAACCTTCAGCAAATCAACAGGGCTTCCACGCAAGCGATTCT  Raphanus sativus var. oleiformis
EV525316       --> AACGAAACCAACCTTCAGCAAATCAACAGGGCTTCCACGCAAGCGATTCT  Raphanus raphanistrum subsp. maritimus
EW731914       --> AACGAAACCAACCTTCAGCAAATCAACAGGGCTTCCACGCAAGCGATTCT  Raphanus sativus cv Rat-Tail Radish #3870
EY938480       --> AACGAAACCAACCTTCAGCAAATCAACAGGTCTTCCACGTAAGCGATTCT  Raphanus sativus cv Early Scarlet Globe
FD561304       --> AACGAAACCAACCTTCAACAAGTCAACAGGGCTTCCACGCAAGCGATTCT  Raphanus sativus var. oleiformis
EX771936       --> AACGAAACCAACCTTCAGCAAATCAACAGGTCTTCCACGTAAGCGATTCT  Raphanus raphanistrum subsp. landra
EY897394       --> AACGAAACCAACCTTCAGCAAATCAACAGGGCTTCCACGCAAGCGATTCT  Raphanus raphanistrum subsp. maritimus
EY923231       --> ..................................................  Raphanus raphanistrum subsp. landra

               151    -    201
UN22558        --> ACAGAGCAAGAGCTCATAGCAACCCACTCAGCGACTCTCACTTCCCCATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776002       <-- ACAGAGCAAGAGCTCATAGCAACCCACTCAGCGACTCTCACTTCCCCATT
FD942312       <-- ACAGAGCAAGAGCTCATAGCAACCCACTCAGCGACTCTCACTTCCCCATT
EX892553       <-- .................AGCAACCCACTCAGCGACTCTCACTTCTCCATT
EX888654       --> ACAGAGCAAGAGCTCATAGCAACCCACTCAGCGACTCTCACTTCTCCATT
EV525316       --> ACAGAGCAAGAGCTCATAGCAACCCACTCAGCGACTCTCACTTCCCCATT
EW731914       --> ACAGAGCAAGAGCTCATAGCAACCCACTCAGCGACTCTCACTTCCCCATT
EY938480       --> ACAGAGCAAGAGCTCATAGCAACCCACTCAGCGACTCTCACTTCCCCATT
FD561304       --> ACAGAGCAAGAGCTCATAGCAACCCACTCAGCGACTCTCACTTCCCCATT
EX771936       --> ACAGAGCAAGAGCTCATAGCAACCCACTCAGCGACTCTCACTTCCCCATT
EY897394       --> ACAGAGCAAGAGCTCATAGCAACCCACTCAGCGACTCTCACTTCCCCATT
EY923231       --> ..................................................

               201    -    251
UN22558        --> CCCATCTCCCCATCTCACGTCGTCTTTTCGCTTCACTTCCCCAAGTTCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776002       <-- CCCATCTCCCCATCTCACGTCGTCTTTTCGCTTCACTTCCCCAAGTTCGT
FD942312       <-- CCCATCTCCCCATCTCACGTCGTCTTTTCGCTTCACTTCCCCAAGTTCGT
EX892553       <-- CCCATCTCCCCATCTCACGTCGTCTTTTCGCTTCACTTCCCCAAGTTCGT
EX888654       --> CCCATCTCCCCATCTCACGTCGTCTTTTCGCTTCACTTCCCCAAGTTCGT
EV525316       --> CCCATCTCCCCATCTCACGTCGACTTTTCGCTTCACTTCCCCAAGTTCGT
EW731914       --> CCCATCTCCCCATCTCACGTCGACTTTTCGCTTCACTTCCCCAAGTTCGT
EY938480       --> CCCATCTCCCCATCTCACGTCGTCTTTTCGCTTCACTTCCCCAAGTTCGT
FD561304       --> CCCATCTCCCCATCTCACGTCGTCTTTTCGCTTCACTTCCCCAAGTTCGT
EX771936       --> CCCATCTCCCCATCTCACGTCGTCTTTTCGCTTCACTTCCCCAAGTTCGT
EY897394       --> CCCATCTCCCCATCTCACGTCGACTTTTCGCTTCACTTCCCCAAGTTCGT
EY923231       --> ..................................................

               251    -    301
UN22558        --> TGGAGCCAACAACGAAGAAGAAGTCTCCAAGAAGGTTGAGTTCGCTGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776002       <-- TGGAGCCAACAACGAAGAAGAAGTCTCCAAGAAGGTTGAGTTCGCTGATA
FD942312       <-- TGGAGCCAACAACGAAGAAGAAGTCTCCAAGAAGGTTGAGTTCGCTGATA
EX892553       <-- TGGAGCCAACAACGAAGAAGAAGTCTCCAAGAAGGTTGAGTTCGCTGATA
EX888654       --> TGGAGCCAACAACGAAGAAGAAGTCTCCAAGAAGGTTGAGTTCGCTGATA
EV525316       --> TGGAGCCAACAACGAAGAAGAAGTCACGAAGAAGGTTGAGTTCGCTGATA
EW731914       --> TGGAGCCAACAACGAAGAAGAAGTCTCGAAGAAGGTTGAGTTCGCTGATA
EY938480       --> TGGAGCCAACAACGAAGAAGAAGTCTCCAAGAAGGTTGAGTTCGCTGATA
FD561304       --> TGGAGCCAACAACGAAGAAGAAGTCTCCAAGAAGGTTGAGTTCGCTGATA
EX771936       --> TGGAGCCAACAACGAAGAAGAAGTCTCCAAGAAGGTTGAGTTCGCTGATA
EY897394       --> TGGAGCCAACAACGAAGAAGAAGTCTCGAAGAAGGTTGAGTTCGCTGATA
EY923231       --> ..................................................

               301    -    351
UN22558        --> TCGGATGCGGCTTCGGCGGTCTTCTCATCTCCCTCGCGACGCTCTTCCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776002       <-- TCGGATGCGGCTTCGGCGGTCTTCTCATCTCCCTCGCGACGCTCTTCCCT
FD942312       <-- TCGGATGCGGCTTCGGCGGTCTTCTCATCTCCCTCGCGACGCTCTTCCCT
EX892553       <-- TCGGATGCGGCTTCGGCGGTCTTCTCATCTCCCTCGCGACGCTCTTCCCT
EX888654       --> TCGGATGCGGCTTCGGCGGTCTTCTCATCTCCCTCGCGACGCTCTTCCCT
EV525316       --> TCGGATGCGGCTTTGGCGGCCTTCTCATCTCCCTCGCGACGCTCTTCCCT
EW731914       --> TCGGATGCGGCTTTGGCGGCCTTCTCATCTCCCTCGCGACGCTCTTCCCT
EY938480       --> TCGGATGCGGCTTCGGCGGTCTTCTCATCTCCCTCGCGACGCTCTTCCCT
FD561304       --> TCGGATGCGGCTTCGGCGGTCTTCTCATCTCCCTCGCGACGCTCTTCCCT
EX771936       --> TCGGATGCGGCTTCGGCGGTCTTCTCATCTCCCTCGCGACGCTCTTCCCT
EY897394       --> TCGGATGCGGCTTTGGCGGCCTTCTCATCTCCCTCGCGACGCTCTTTCCT
EY923231       --> ..................................................

               351    -    401
UN22558        --> GATACATTGATGATCGGCATGGAGCTGAGGGATAAAGTTACTGAATACGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776002       <-- GATACACTGATGATCGGCATGGAGCTGAGGGATAAATTTACTGAATACGT
FD942312       <-- GATACATTGATGATCGGCATGGAGCTGAGGGATAAAGTTACTGAATACGT
EX892553       <-- GATACATTGATGATCGGCATGGAGCTGAGGGATAAAGTTACTGAATACGT
EX888654       --> GATACATTGATGATCGGCATGGAGCTGAGGGATAAAGTTACTGAATACGT
EV525316       --> GATACATTGATGATCGGCATGGAGCTGAGGGATAAAGTTACTGAATACGT
EW731914       --> GATACATTGATGATCGGCATGGAGCTGAGGGATAAAGTTACTGAATACGT
EY938480       --> GATACATTGATGATCGGCATGGAGCTGAGGGATAAAGTTACTGAATACGT
FD561304       --> GATACATTGATGATCGGCATGGAGCTGAGGGATAAAGTTACTGAATACGT
EX771936       --> GATACACTGATGATCGGCATGGAGCTGAGGGATAAATTTACTGAATACGT
EY897394       --> GATACATTGATGATCGGCATGGAGCTGAGGGATAAAGTTACTGAATACGT
EY923231       --> ..................................................

               401    -    451
UN22558        --> CAAGGAACGGATCTTAGCCTTGAGGAAGACGAGCTCGGGGGGACAGTACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776002       <-- CAAGGAACGGATCTTAGCCTTGAGGAAGACGAGCTCGGGGGGACAGTACG
FD942312       <-- CAAGGAACGGATCTTAGCCTTGAGGAAGACGAGCTCGGGGGGACAGTACG
EX892553       <-- CAAGGAACGGATCTTAGCCTTGAGGAAGACGAGCTCGGGGGGACAGTACG
EX888654       --> CAAGGAACGGATCTTAGCCTTGAGGAAGACGAGCTCGGGGGGACAGTACG
EV525316       --> CAAGGAACGGATCTTAGCCTTGAGGAAGACGAGCTCGGGGGGACAGTACG
EW731914       --> CAAGGAACGGATCTTAGCCTTGAGGAAGACGAGCTCGGGGGGACAGTACG
EY938480       --> CAAGGAACGGATCTTAGCCTTGAGGAAGACGAGCTCGGGGGGACAGTACG
FD561304       --> CAAGGAACGGATCTTAGCCTTGAGGAAGACGAGCTCGGGGGGACAGTACG
EX771936       --> CAAGGAACGGATCTTAGCCTTGAGGAAGACGAGCTCGGGGGGACAGTACG
EY897394       --> CAAGGAACGGATCTTAGCCTTGAGGAAGACGAGCTCGGGGGGACAGTACG
EY923231       --> ..................................................

               451    -    501
UN22558        --> AGAACATCTCTGTTGTTAGGACTAACTCGATGAAGTACATTCCGAATTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776002       <-- AGAACATCTCTGTTGTTAGGACTAACTCGATGAAGTACATTCCGAATTAC
FD942312       <-- AGAACATCTCTGTTGTTAGGACTAACTCGATGAAGTACATTCCGAATTAC
EX892553       <-- AGAACATCTCTGTTGTTAGGACTAACTCGATGAAGTACATTCCGAATTAC
EX888654       --> AGAACATCTCTGTTGTTAGGACTAACTCGATGAAGTACATTCCGAATTAC
EV525316       --> AGAACATCTCTGTTGTTAGGACTAACTCGATGAAGTACATTCCGAATTAC
EW731914       --> AGAACATCTCTGTTGTTAGGACTAACTCGATGAAGTACATTCCGAATTAC
EY938480       --> AGAACATCTCTGTTGTTAGGACTAACTCGATGAAGTACATTCCGAATTAC
FD561304       --> AGAACATCTCTGTTGTTAGGACTAACTCGATGAAGTACATTCCGAATTAC
EX771936       --> AGAACATCTCTGTTGTTAGGACTAACTCGATGAAGTACATTCCGAATTAC
EY897394       --> AGAACATCTCTGTTGTTAGGACTAACTCGATGAAGTACATTCCGAATTAC
EY923231       --> ..................................................

               501    -    551
UN22558        --> TTTGAGAAAGGACAGCTTTCCAAGATGTTTTTCCTCTTTCCGGATCCGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776002       <-- TTTGAGAAAGGACAGCTTTCCAAGATGTTTTTCCTCTTTCCGGATCCGCA
FD942312       <-- TTTGAGAAAGGACAGCTTTCCAAGATGTTTTTCCTCTTTCCGGATCCGCA
EX892553       <-- TTTGAGAAAGGACAGCTTTCCAAGATGTTTTTCCTCTTTCCGGATCCGCA
EX888654       --> TTTGAGAAAGGACAGCTTTCCAAGATGTTTTTCCTCTTTCCGGATCCGCA
EV525316       --> TTTGAGAAAGGACAGCTTTCCAAGATGTTTTTCCTCTTTCCGGATCCGCA
EW731914       --> TTTGAGAAAGGACAGCTTTCCAAGATGTTTTTCCTCTTTCCGGATCCGCA
EY938480       --> TTTGAGAAAGGACAGCTTTCCAAGATGTTTTTCCTCTTTCCGGATCCGCA
FD561304       --> TTTGAGAAAGGACAGCTTTCCAAGATGTTTTTCCTCTTTCCGGATCCGCA
EX771936       --> TTTGAGAAAGGACAGCTTTCCAAGATGTTTTTCCTCTTTCCGGATCCGCA
EY897394       --> TTTGAGAAAGGACAGCTTTCCAAGATGTTTTTCCTCTTTCCGGATCCGCA
EY923231       --> ..................................................

               551    -    601
UN22558        --> TTTCAAGGAGAAGAATCACAGGAGGAGGGTGATTAGTATTGATTTGCTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776002       <-- TTTCAAGGAGAAGAATCGCTGGAGGAGGGTGATTAGTATTGATTTGCTGG
FD942312       <-- TTTCAAGGAGAAGAATCACAGGAGGAGGGTGATTAGTATTGATTTGCTGG
EX892553       <-- TTTCAAGGAGAAGAATCACAGGAGGAGGGTGATTAGTATTGATTTGCTGG
EX888654       --> TTTCAAGGAGAAGAATCACAGGAGGAGGGTGATTAGTATTGATTTGCTGG
EV525316       --> TTTCAAGGAGAAGAATCACAGGAGGAGGGTGATTAGTATTGATTTGCTGG
EW731914       --> TTTCAAGGAGAAGAATCACAGGAGGAGGGTGATTAGTATTGATTTGCTGG
EY938480       --> TTTCAAGGAGAAGAATCACAGGAGGAGGGTGATTAGTATTGATTTGCTGG
FD561304       --> TTTCAAGGAGAAGAATCACAGGAGGAGGGTGATTAGTATTGATTTGCTGG
EX771936       --> TTTCAAGGAGAAGAATCGCTGGAGGAGGGTGATTAGTATTGATTTGCTGG
EY897394       --> TTTCAAGG..........................................
EY923231       --> ..........................GGGTGATTAGTATTGATTTGCTGG

               601    -    651
UN22558        --> ATGAGTATGCGTACGTTCTTAGAGCTGGTGGGATTATATACACGATCACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776002       <-- ATGAGTATGCGTACGTTCTTAGAGCTGGTGGGATTATATACACGATCACT
FD942312       <-- ATGAGTATGCGTACGTTCTTAGAGCTGGTGGGATTATATACACGATCACT
EX892553       <-- ATGAGTATGCGTACGTTCTTAGAGCTGGTGGGATTATATACACGATCACT
EX888654       --> ATGAGTATGCGTACGTTCTTAGAGCTGGTGGGATTATATACACGATCACT
EV525316       --> ATGAGTATGCGTACGTTCTTAGAGCTGGTGGGATTATATACACGATCACT
EW731914       --> ATGAGTATGCGTACGTTCTTAGAGCTGGTGGGATTATATACACGATCACT
EY938480       --> ATGAGTATGCGTACGTTCTTAGAGCTGGTGGGATTATATACACGATCACT
FD561304       --> ATGAGTATGCGTACGTTCTTAGGGCTGGTGGGATTATATACACGATCACT
EX771936       --> ATGAGTATGCGTACGTTCTTAGAGCTGGTGGGATTATATACACGATCACT
EY897394       --> ..................................................
EY923231       --> ATGAGTATGCGTACGTTCTTAGAGCTGGTGGGATTATATACACGATCACT

               651    -    701
UN22558        --> GACGTTGAGGAGCTTGGTGAGTGGATGAGGTCTTGCTTGGAGAAACATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776002       <-- GACGTTGAGGAGCTTGGTGAGTGGATGAGGTCTTGCTTGGAGAAACATCC
FD942312       <-- GACGTTGAGGAGCTTGGTGAGTGGATGAGGTCTTGCTTGGAGAAACATCC
EX892553       <-- GACGTTGAGGAGCTTGGTGAGTGGATGAGGTCTTGCTTGGAGAAACATCC
EX888654       --> GACGTTGAGGAGCTTGGTGAGTGGATGAGGTCTTGCTTGGAGAAACATCC
EV525316       --> GACGTTGAGGAGCTTGGTGAGTGGATGAGGTCTTGCTTGGAGAAACATCC
EW731914       --> GACGTTGAGGAGCTTGGTGAGTGGATGAGGTCTTGCTTGGAGAAACATCC
EY938480       --> GACGTTGAGGAGCTTGGTGAGTGGATGAGGTCTTGCTTGGAGAAACATCC
FD561304       --> GACGTTGAGGAGCTTGGTGAGTGGATGAGGTCTTGCTTGGAGAAACATCC
EX771936       --> GACGTTGAGGAGCTTGGTGAGTGGATGAGGTCTTGCTTGGAGAAACATCC
EY897394       --> ..................................................
EY923231       --> GACGTTGAGGAGCTTGGTGAGTGGATGAGGTCTTGCTTGGAGAAACATCC

               701    -    751
UN22558        --> CATGTTTGAGTCTTTGACACAGGAAGAGCTTGATTCTGATCCTGTCGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776002       <-- CATGTTTGAGTCTTTGACACAGGAAGAGCTTGATTCTGATCCTGTCGTTG
FD942312       <-- CATGTTTGAGTCTTTGACACAGGAAGAGCTTGATTCTGATCCTGTCGTTG
EX892553       <-- CATGTTTGAGTCTTTGACACAGGAAGAGCTTGATTCTGATCCTGTCGTTG
EX888654       --> CATGTTTGAGTCTTTGAC................................
EV525316       --> CATGTTTGAGTCTTTGACACAGGAGGAGCTTGATTCTGATCCTGTTGTTG
EW731914       --> CATGTTTGAGTCTTTGACACAGGAGGAGCTTGATTCTGATCCTGTTGTTG
EY938480       --> CATGTTTGAGTCTTTGACACAG-AAGAGCTTGATTCTGATTCTGTCGTTG
FD561304       --> CATGTTTGAGTCTTTGACACAG-AAGAGCTTGAT-CTGATCCTGTCGTTG
EX771936       --> CATGTTTGAGTCTTTGACACAGGAAGAGCTTGAT-CTGATCCTGTCGTTG
EY897394       --> ..................................................
EY923231       --> CATGTTTGAGTCTTTGACACAGGAAGAGCTTGATTCTGATCCTGTCGTTG

               751    -    801
UN22558        --> AGCTTCTGTGCAGTGCTACTGAGGAAGGACAGAAAGTTGCCAGGAATGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776002       <-- AGCTTCTGTGCAGTGCTACTGAGGAAGGACAGAAAGTTGCCAGGAATGGA
FD942312       <-- AGCTTCTGTGCAGTGCTACTGAGGAAGGACAGAAAGTTGCCAGGAATGGA
EX892553       <-- AGCTTCTGTGCAGTGCTACTGAGGAAGGACAGAAAGTTGCCAGGAATGGA
EX888654       --> ..................................................
EV525316       --> AGCTTCTGTGCAGTGCTACTGAGGAAGGACAGAAAGTTGCCAGGAATGGA
EW731914       --> AGCTTCTGTGCAGTGCTACTGAGGAAG-ACAGAAAGTTGCCAGGAAT...
EY938480       --> AGCTTCTGTGCAGTGCTACTGAG-AA-GACAGAAAGT-G-CAGGAATGGA
FD561304       --> AGCTTCTGTGCAGTGCTAC...............................
EX771936       --> AGCTTCTGTGCAGTGCTACTGAG-AAGGACAGAA-G-TGCAAGGAATGGA
EY897394       --> ..................................................
EY923231       --> AGCTTCTGTGCAGTGCTACTGAGGAAGGACAGAAAGTTGCCAGGAATGGA

               801    -    851
UN22558        --> GGTCAGACTTTCAGAGCCGTTTTCAGACGCATTGCATATGTTTCTTGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776002       <-- GGTCAGACTTTCAGAGCCGTTTTCAGACGCATTGCATATGTTTCTTGAAT
FD942312       <-- GGTCAGACTTTCAGAGCCGTTTTCAGACGCATTGCATATGTTTCTTGAAT
EX892553       <-- GGTCAGACTTTCAGAGCCGTTTTCAGACGCATTGCATATGTTTCTTGAAT
EX888654       --> ..................................................
EV525316       --> GGTCAGACTTTCAGAGCCGTTTTCAGACGCATTGCATATGTTTCTTGAAT
EW731914       --> ..................................................
EY938480       --> G-TCAGACTTTCAGAGCCGTTT-CAGACGCATTGCATAT...........
FD561304       --> ..................................................
EX771936       --> Gtca..............................................
EY897394       --> ..................................................
EY923231       --> GGTCAGACTTTCAGAGCCGTTTTCAGACGCATTGCATATGTTTCTTGAAT

               851    -    901
UN22558        --> TCAATCTCTTTCTTT----TTTGTAGTGAACACCTTATTGTTGTTGTAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776002       <-- TCAATCTCTTTCTTT----TTTGTAGTGAACACCTTATTGTTGTTGTAAC
FD942312       <-- TCAATCTCTTTCTTT----TTTGTAGTGAACACCTTATTGTTGTTGTAAC
EX892553       <-- TCAATCTCTTTCTTT----TTTGTAGTGAACCCCTTATTGTTGTTGTAAC
EX888654       --> ..................................................
EV525316       --> TCAATCTCTTTCTTTCTTTTTTGTAGTG-ACACCTTATTGTTGTTGTAAC
EW731914       --> ..................................................
EY938480       --> ..................................................
FD561304       --> ..................................................
EX771936       --> ..................................................
EY897394       --> ..................................................
EY923231       --> TCAATCTCTTTCTTT----TTTGTAGTGAACACCTTATTGTTGTTGTAAC

               901    -    951
UN22558        --> ACCAGATTCTTTCTTCACTTCAAATTTATTGGGATAGTATTTTTACAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX776002       <-- ACCAGATTCTTTCTTCACTTCAAATTTATTGGGATAGTATTTTTAC....
FD942312       <-- ACCAGATTCTTTCTTCACTTCAAATTTATTGGGATAGTATTTTTAC....
EX892553       <-- CCCAGATTCTTTCTTCACTTCAAATTTATTGGGATAGTATTTTTACAGAA
EX888654       --> ..................................................
EV525316       --> ACCAGATTCTTTCTTCACTTCAAATTTATTG...................
EW731914       --> ..................................................
EY938480       --> ..................................................
FD561304       --> ..................................................
EX771936       --> ..................................................
EY897394       --> ..................................................
EY923231       --> ACCAGATTCTTTCTTCACTTCAAATTTATTGGGATAGTATTTTTACAG..

               951    -   1001
UN22558        --> ATTAATGATCTTTCAAGGCCG
                   ~~~~~~~~~~~~~~~~~~~~~
EX776002       <-- .....................
FD942312       <-- .....................
EX892553       <-- ATTAATGATCTTTCAAGGCCG
EX888654       --> .....................
EV525316       --> .....................
EW731914       --> .....................
EY938480       --> .....................
FD561304       --> .....................
EX771936       --> .....................
EY897394       --> .....................
EY923231       --> .....................