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Alignment for radish unigene UN22559

               1      -     51
UN22559        --> GGTTCACATTTATGTTATTCATTATTATAAATAATGCAACAAATCCAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566077       <-- GGTTCACATTTATGTTATTCATTATTATAAATAATGCAACAAATCCAAAA
FD961907       <-- .........................................AATCCAAAA
FD540222       <-- ..........................................ATCCAAAA
FD534745       <-- .........................................ttTCCAAAA
EV526152       <-- ............................................CCAAAA
EX763161       <-- ............................................CCAAAA
EX888206       <-- ............................................CCAAAA
EY932692       <-- ............................................CCAAAA
FD534046       <-- ............................................CCAAAA
FD560484       <-- ............................................CCAAAA
FD955626       <-- .............................................CAAAA
EW724798       <-- ..............................................AAAA
EY931865       <-- ............................................ctAAAA
FD946939       <-- ..............................................AAAA
EX748776       <-- ...............................................AAA
EY914969       <-- .............................................cgAAA
EY946181       <-- ...............................................AAA
FD558898       <-- ...............................................AAA
FD957266       <-- ...............................................AAA
FD980673       <-- ...............................................AAA
EV527382       <-- ...............................................gAA
FD579024       <-- ................................................AA
EX890190       <-- ..................................................
EV571288       --> GGTTCACATTTATGTTATTCATTATTATAAATAATGCAACAAATCCAAAA
FD958570       --> .........................................AATCCAAAA
EV532215       --> ............................................CCAAAA
FD530074       --> ............................................CCAAAA
FD564878       --> ............................................CCAAAA
EW730131       --> ..............................................AAAA
EY927720       --> ............................................ctAAAA
EX766713       --> ...............................................AAA
EY910907       --> .............................................cgAAA
EY942325       --> ...............................................AAA
FD554704       --> ...............................................AAA
FD976534       --> ...............................................AAA
EV531642       --> ...............................................gAA
EX893754       --> ..................................................

               51     -    101
UN22559        --> CAAACATTTACTTTATTTATAATTATATGTCAACTTCAATACTTTATTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566077       <-- CAAACATTTACTTTATTTATAATTATATGTCAACTTCAATACTTTATTAC
FD961907       <-- TAAACATTTACTTTATTTATAATTATATGTCAACTTCAATACTTTATTAC
FD540222       <-- CAAACGTTTACTTTATTTATAATTATATGTCAACTTCAATACTTTATTAC
FD534745       <-- TAAACATTTACTTTATTTATAATTATATGTCAACTTCAATACTTTATTAC
EV526152       <-- TAAACATTTACTTTATTTATAATTATATGTCAACTTCAATACTTTATTAC
EX763161       <-- CAAACATTTACTTTATTTATAATTATATGTCAACTTCAATACTTTATTAC
EX888206       <-- CAAACATTTACTTTATTTATAATTATATGTCAACTTCAATACTTTATTAC
EY932692       <-- CAAACATT-ACTTTATTTATAATTATATGTCAACTTCAATACTTTATTAC
FD534046       <-- TAAACATTTACTTTATTTATAATTATATGTCAACTTCAATCCTTTATTAC
FD560484       <-- CAAACATTTACTTTATTTATAATTATATGTCAACTTCAATACTTTATTAC
FD955626       <-- CAAACATTTACTTTATTTATAATTATATGTCAACTTCAATACTTTATTAC
EW724798       <-- CAAACATTTACTTTATTTATAATTATATGTCAACTTCAATACTTTATTAC
EY931865       <-- CAAACATTTACTTTATTTATAATTATATGTCAACTTCAATACTTTATTAC
FD946939       <-- CAAACATT-ACTTTATTTATAATTATATGTCAACTTCAATACTTTATTAC
EX748776       <-- CAAACATTTACTTTATTTATAATTATATGTCAACTTCAATACTTTATTAC
EY914969       <-- CAAACATTTACTTTATTTATAATTATATGTCAACTTCAATACTTTATTAC
EY946181       <-- CAAACATTTACTTTATTTATAATTATATGTCAACTTCAATACTTTATTAC
FD558898       <-- CAAACATTTACTTTATTTATAATTATATGTCAACTTCAATACTTTATTAC
FD957266       <-- CAAACATTTACTTTATTTATAATTATATGTCAACTTCAATACTTTATTAC
FD980673       <-- CAAACATTTACTTTATTTATAATTATATGTCAACTTCAATACTTTATTAC
EV527382       <-- CAAACATTTACTTTATTTATAATTATATGTCAACTTCAATACTTTATTAC
FD579024       <-- CAAACATTTACTTTATTTATAATTATATGTCAACTTCAATACTTTATTAC
EX890190       <-- ..................................................
EV571288       --> CAAACATTTACTTTATTTATAATTATATGTCAACTTCAATACTTTATTAC
FD958570       --> TAAACATTTACTTTATTTATAATTATATGTCAACTTCAATACTTTATTAC
EV532215       --> CAAACATTTACTTTATTTATAATTATATGTCAACTTCAATACTTTATTAC
FD530074       --> TAAACATTTACTTTATTTATAATTATATGTCAACTTCAATCCTTTATTAC
FD564878       --> CAAACATTTACTTTATTTATAATTATATGTCAACTTCAATACTTTATTAC
EW730131       --> CAAACATTTACTTTATTTATAATTATATGTCAACTTCAATACTTTATTAC
EY927720       --> CAAACATTTACTTTATTTATAATTATATGTCAACTTCAATACTTTATTAC
EX766713       --> TAAACATTTACTTTATTTAAAATTATATGTCAACTTCAATACTTTATTAC
EY910907       --> CAAACATTTACTTTATTTATAATTATATGTCAACTTCAATACTTTATTAC
EY942325       --> CAAACATTTACTTTATTTATAATTATATGTCAACTTCAATACTTTATTAC
FD554704       --> CAAACATTTACTTTATTTATAATTATATGTCAACTTCAATACTTTATTAC
FD976534       --> CAAACATTTACTTTATTTATAATTATATGTCAACTTCAATACTTTATTAC
EV531642       --> CAAACATTTACTTTATTTATAATTATATGTCAACTTCAATACTTTATTAC
EX893754       --> ..................................................

               101    -    151
UN22559        --> AAGGCTCCCAATAAAAAA-TATTATAGTTTTTTCTATTAAAGAAAAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566077       <-- AAGGCTCCCAATAAAAAA-TATTATAGTTTTTTCTATTAAAGAAAAAACA  Raphanus raphanistrum subsp. landra
FD961907       <-- AAGGCTCCCAATAAAAAA-TATTATAGTTTTTTCTATTAAAGAAAAAACA  Raphanus raphanistrum subsp. maritimus
FD540222       <-- AAGGCTCTCAATAAAAAA-TATTATAGTTTTTTCTATTAAAGAAAAAACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD534745       <-- AAGGCTCCCAATAAAAAA-TATTATAGTTTTTTCTATTAAAGAAAAAACA  Raphanus raphanistrum subsp. maritimus
EV526152       <-- AAGGCTCCCAATAAAAAAATATTATAGTTTTTTCTATTAAAGAAAAAACA  Raphanus raphanistrum subsp. maritimus
EX763161       <-- AAGGCTCCCAATAAAAAA-TATTATAGTTTTTTCTATTAAAGAAAAAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX888206       <-- AAGGCTCCCAATAAAAAAATATTATAGTTTTTTCTATTAAAGAAAAAACA  Raphanus sativus var. oleiformis
EY932692       <-- AAGGCTCTCAATAAAAAAATATTATAGTTTTTTCTATTAAAGAAAAAACA  Raphanus sativus var. oleiformis
FD534046       <-- AAGGCTCCCAATAAAAAA-TATTATAGTTTTTTCTATTAAAGAAAAAACA  Raphanus raphanistrum subsp. maritimus
FD560484       <-- AAGGCTCCCAATAAAAAAATATTATAGTTTTTTCTATTAAAGAAAAAACA  Raphanus sativus var. oleiformis
FD955626       <-- AAGGCTCCCAATAAAAAA-TATTATAGTTTTTTCTATTAAAGAAAAAACA  Raphanus sativus cv Rat-Tail Radish #3870
EW724798       <-- AAGGCTCCCAATAAAAAA-TATTATAGTTTTTTCTATTAAAGAAAAAACA  Raphanus sativus cv Early Scarlet Globe
EY931865       <-- AAGGCTCCCAATAAAAAAATATTATAGTTTTTTCTATTAAAGAAAAAACA  Raphanus sativus var. oleiformis
FD946939       <-- AAGGCTCCCAATAAAAAA-TATTATAGTTTTTTCTATTAAAGAAAAAACA  Raphanus sativus cv Early Scarlet Globe
EX748776       <-- AAGGCTCCCAATAAAAAA-TATTATAGTTTTTTCTATTAAAGAAAAAACA  Raphanus raphanistrum subsp. maritimus
EY914969       <-- AAGGCTACCAATAAAAAA-TATTATAGTTTTTTCTATTAAAGAAAAAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY946181       <-- AAGGCTCCCAATAAAAAA-TATTATAGTTTTTTCTATTAAAGAAAAAACA  Raphanus sativus cv Rat-Tail Radish #3870
FD558898       <-- AAGGCTCCCAATAAAAAA-TATTATAGTTTTTTCTATTAAAGAAAAAACA  Raphanus raphanistrum subsp. landra
FD957266       <-- AAGGCTCCCAATAAAAAA-TATTATAGTTTTTTCTATTAAAGAAAAAACA  Raphanus sativus cv Rat-Tail Radish #3870
FD980673       <-- AAGGCTCCCAATAAAAAA-TATTATAGTTTTTTCTATTAAAGAAAAAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV527382       <-- AAGGCTCCCAATAAAAAA-TATTATAGTTTTTTCTATTAAAGAAAAAACA  Raphanus raphanistrum subsp. maritimus
FD579024       <-- AAGGCTCCCAATAAAAAA-TATTATAGTTTTTTCTATTAAAGAAAAAACA  Raphanus sativus cv Rat-Tail Radish #3870
EX890190       <-- ..................................................  Raphanus sativus var. oleiformis
EV571288       --> AAGGCTCCCAATAAAAAA-TATTATAGTTTTTTCTATTAAAGAAAAAACA  Raphanus raphanistrum subsp. landra
FD958570       --> AAGGCTCCCAATAAAAAA-TATTATAGTTTTTTCTATTAAAGAAAAAACA  Raphanus raphanistrum subsp. maritimus
EV532215       --> AAGGCTCCCAATAAAAAA-TATTATAGTTTTTTCTATTAAAAAAAAAACA  Raphanus raphanistrum subsp. maritimus
FD530074       --> AAGGCTCCCAATAAAAAA-TATTATAGTTTTTTCTATTAAAGAAAAAACA  Raphanus raphanistrum subsp. maritimus
FD564878       --> AAGGCTCCCAATAAAAAAATATTATAGTTTTTTCTATTAAAGAAAAAACA  Raphanus sativus var. oleiformis
EW730131       --> AAGGCTCCCAATAAAAAA-TATTATAGTTTTTTCTATTAAAGAAAAAACA  Raphanus sativus cv Early Scarlet Globe
EY927720       --> AAGGCTCCCAATAAAAAAATATTATAGTTTTTTCTATTAAAGAAAAAACA  Raphanus sativus var. oleiformis
EX766713       --> AAGGCTCCCAATAAAAAA-TATTATAGTTTTTTCTATTAAAAAAAAAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY910907       --> AAGGCTACCAATAAAAAA-TATTATAGTTTTTTCTATTAAAGAAAAAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY942325       --> AAGGCTCCCAATAAAAAA-TATTATAGTTTTTTCTATTAAAAAAAAAACA  Raphanus sativus cv Rat-Tail Radish #3870
FD554704       --> AAGGCTCCCAATAAAAAA-TATTATAGTTTTTTCTATTAAAGAAAAAACA  Raphanus raphanistrum subsp. landra
FD976534       --> AAGGCTCCCAATAAAAAA-TATTATAGTTTTTTCTATTAAAGAAAAAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV531642       --> AAGGCTCCCAATAAAAAA-TATTATAGTTTTTTCTATTAAAGAAAAAACA  Raphanus raphanistrum subsp. maritimus
EX893754       --> ..................................................  Raphanus sativus var. oleiformis

               151    -    201
UN22559        --> ATATAGCAAAAATGTGAAAAAAACTTCAAAGATATCATGATTTAGCATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566077       <-- ATATAGCAAAAATGTAAAAAAAACTTCAAAGATATCATGATTTAGCATCA
FD961907       <-- ATATAGCAAAAATGTGAAAAAAACTTCAAAGATATCATGATTTAGCATCA
FD540222       <-- ATATAGCAAAAATGTGAAAAAA-CTTCAAAGATATCATGATTTAGCATCA
FD534745       <-- ATATAGCAAAAATGTGAAAAAA-CTTCAAAGATATCATGATTTAGCATCA
EV526152       <-- ATATAGCAAAAATGTGAAAAAA-CTTCAAAGATATCATGATTTAGCATCA
EX763161       <-- ATATAGCAAAAATGTGAAAAAAACTTCAAAGATATCATGATTTAGCATCA
EX888206       <-- ATATAGCAAAAATGTGAAAAAAACTTCAAAGATATCATGATTTAGCATCA
EY932692       <-- ATATAGCAAAAATGTGAAAAAAACTTCAAAGATATCATGATTTAGCATCA
FD534046       <-- ATATAGCAAAAATGTGAAAAAA-CTTCAAAGATATCATGATTTAGCATCA
FD560484       <-- ATATAGCAAAAATGTGAAAAAAACTTCAAAGATATCATGATTTAGCATCA
FD955626       <-- ATATAGCAAAAATGTGAAAAAA-CTTCAAAGATATCATGATTTAGCATCA
EW724798       <-- ATATAGCAAAAATGTGAAAAAAACTTCAAAGATATCATGATTTAGCATCA
EY931865       <-- ATATAGCAAAAATGTGAAAAAAACTTCAAAGATATCATGATTTAGCATCA
FD946939       <-- ATATAGCAAAAATGTGAAAAAAACTTCAAAGATATCATGATTTAGCATCA
EX748776       <-- ATATAGCAAAAATGTGAAAAAAACTTCAAAGATATCATGATTTAGCATCA
EY914969       <-- ATATAGCAAAAATGTGAAAAAAACTTCAAAGATATCATGATTTAGCATCA
EY946181       <-- ATATAGCAAAAATGTGAAAAAAACTTCAAAGATATCATGATTTAGCATCA
FD558898       <-- ATATAGCAAAAATGTAAAAAAAACTTCAAAGATATCATGATTTAGCATCA
FD957266       <-- ATATAGCAAAAATGTGAAAAAA-CTTCAAAGATATCATGATTTAGCATCA
FD980673       <-- ATATAGCAAAAATGTGAAAAAAACTTCAAAGATATCATGATTTAGCATCA
EV527382       <-- ATATAGCAAAAATGTGAAAAAAACTTCAAAGATATCATGATTTAGCATCA
FD579024       <-- ATATAGCAAAAATGTGAAAAAAACTTCAAAGATATCATGATTTAGCATCA
EX890190       <-- ..................................................
EV571288       --> ATATAGCAAAAATGTAAAAAAAACTTCAAAGATATCATGATTTAGCATCA
FD958570       --> ATATAGCAAAAATGTGAAAAAAACTTCAAAGATATCATGATTTAGCATCA
EV532215       --> ATATAGCAAAAATGTGAAAAAA-CTTCAAAGATATCATGATTTAGCATCA
FD530074       --> ATATAGCAAAAATGTGAAAAAA-CTTCAAAGATATCATGATTTAGCATCA
FD564878       --> ATATAGCAAAAATGTGAAAAAAACTTCAAAGATATCATGATTTAGCATCA
EW730131       --> ATATAGCAAAAATGTGAAAAAAACTTCAAAGATATCATGATTTAGCATCA
EY927720       --> ATATAGCAAAAATGTGAAAAAAACTTCAAAGATATCATGATTTAGCATCA
EX766713       --> ATATACCAAAAATGTGAAAAAA-CTTCAAAGATATCATGATTTAGCATCA
EY910907       --> ATATAGCAAAAATGTGAAAAAAACTTCAAAGATATCATGATTTAGCATCA
EY942325       --> ATATAACAAAAATGTGAAAAAAACTTCAAAAATATCATGATTTAACATCA
FD554704       --> ATATAGCAAAAATGTAAAAAAAACTTCAAAGATATCATGATTTAGCATCA
FD976534       --> ATATAGCAAAAATGTGAAAAAAACTTCAAAGATATCATGATTTAGCATCA
EV531642       --> ATATAGCAAAAATGTGAAAAAAACTTCAAAGATATCATGATTTAGCATCA
EX893754       --> ..................................................

               201    -    251
UN22559        --> TATTTATTCACCTTACTTAACCAGAACGTTAACAAGGAGTTCCGCAAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566077       <-- TATTTATTCACCTTACTTAACCAGAACGTTAACAAGGAGTTCCGCAAAAG
FD961907       <-- TATTTATTCACCTTACTTAACCAGAACGTTAACAAGGAGTTCCGCAAAAG
FD540222       <-- TATTTATTCATCTTACTTAACCAGAACGTTAACAAGGAGTTCAGCAAAAG
FD534745       <-- TATTTATTCACCTTACTTAACCAGAACGTTAACAAGGAGTTCCGCAAAAG
EV526152       <-- TATTTATTCACCTTACTTAACCAGAACGTTAACAAGGAGTTCCGCAAAAG
EX763161       <-- TATTTATTCACCTTACTTAACCAGAACGTTAACAAGGAGTTCCGCAAAAG
EX888206       <-- TATTTATTCACCTTACTTAACCAGAACGTTAACAAGGAGTTCCGCAAAAG
EY932692       <-- TATTTATTCACCTTACTTAACCAGAACGTTAACAAGGAGTTCCGCAAAAG
FD534046       <-- TATTTATTCACCTTACTTAACCAGAACGTTAACAAGGAGTTCCGCAAAAG
FD560484       <-- TATTTATTCACCTTACTTAACCAGAACGTTAACAAGGAGTTCCGCAAAAG
FD955626       <-- TATTTATTCACCTTACTTAACCAGAACGTTAACAAGGAGTTCCGCAAAAG
EW724798       <-- TATTTATTCACCTTACTTAACCAGAACGTTAACAAGGAGTTCCGCAAAAG
EY931865       <-- TATTTATTCACCTTACTTAACCAGAACGTTAACAAGGAGTTCCGCAAAAG
FD946939       <-- TATTTATTCACCTTACTTAACCAGAACGTTAACAAGGAGTTCCGCAAAAG
EX748776       <-- TATTTATTCACCTTACTTAACCAGAACGTTAACAAGGAGTTCCGCAAAAG
EY914969       <-- TATTTATTCACCTTACTTAACCAGAACGTTAACAAGGAGTTCCGCAAAAG
EY946181       <-- TATTTATTCACCTTACTTAACCAGAACGTTAACAAGGAGTTCCGCAAAAG
FD558898       <-- TATTTATTCACCTTACTTAACCAGAACGTTAACAAGGAGTTCCGCAAAAG
FD957266       <-- TATTTATTCACCTTACTTAACCAGAACGTTAACAAGGAGTTCCGCAAAAG
FD980673       <-- TATTTATTCACCTTACTTAACCAGAACGTTAACAAGGAGTTCCGCAAAAG
EV527382       <-- TATTTATTCACCTTACTTAACCAGAACGTTAACAAGGAGTTCCGCAAAAG
FD579024       <-- TATTTATTCACCTTACTTAACCAGAACGTTAACAAGGAGTTCCGCAAAAG
EX890190       <-- ..................................................
EV571288       --> TATTTATTCACCTTACTTAACCAGAACGTTAACAAGGAGTTCCGCAAAAG
FD958570       --> TATTTATTCACCTTACTTAACCAGAACGTTAACAAGGAGTTCCGCAAAAG
EV532215       --> TATTTATTCACCTTACTTAACCAGAACGTTAACAAGGAGTTCCGCAAAAG
FD530074       --> TATTTATTCACCTTACTTAACCAGAACGTTAACAAGGAGTTCCGCAAAAG
FD564878       --> TATTTATTCACCTTACTTAACCAGAACGTTAACAAGGAGTTCCGCAAAAG
EW730131       --> TATTTATTCACCTTACTTAACCAGAACGTTAACAAGGAGTTCCGCAAAAG
EY927720       --> TATTTATTCACCTTACTTAACCAGAACGTTAACAAGGAGTTCCGCAAAAG
EX766713       --> TATTTATTCACCTTACTTAACCAGAACGTTAACAAGGAGTTCCGCAAAAG
EY910907       --> TATTTATTCACCTTACTTAACCAGAACGTTAACAAGGAGTTCCGCAAAAG
EY942325       --> TATTTATTCACCTTACTTAACCAAAACGTTAACAAGGAGTTCCGCAAAAG
FD554704       --> TATTTATTCACCTTACTTAACCAGAACGTTAACAAGGAGTTCCGCAAAAG
FD976534       --> TATTTATTCACCTTACTTAACCAGAACGTTAACAAGGAGTTCCGCAAAAG
EV531642       --> TATTTATTCACCTTACTTAACCAGAACGTTAACAAGGAGTTCCGCAAAAG
EX893754       --> ..................................................

               251    -    301
UN22559        --> CAAGTCACATCGTTTTTTTCCTTTGTCCCATAACATGTACCCTTCCCATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566077       <-- CAAGTCACATCGTTTTTTTCCTTTGTCCCATAACATGTACCCTCCCCATT
FD961907       <-- CAAGTCACATCGTTTTTTTCCTTTGTCCCATAACATGTACCCTTCCCATT
FD540222       <-- CAAGTCACATCGTTTTTTTCCTTTGTCCCATAACATGTACC--CCCCATT
FD534745       <-- CAAGTCACATCGTTTTTTTCCTTTGTCCCATAACATGTACCCTTCCCATT
EV526152       <-- CAAGTCACATCGTTTTTTTCCTTTGTCCCATAACATGTACCCTTCCCATT
EX763161       <-- CAAGTCGCATCGTTTTTTTCCTTTGTCCCATAACATGTGCCCTTCCCATT
EX888206       <-- CAAGTCACATCGTTTTTTTCCTTTGTCCCATAACATGTACCCTTCCCATT
EY932692       <-- CAAGTCACATCGTTTTTTTCCTTTGTCCCATAACATGTACCCTTCCCATT
FD534046       <-- CAAGTCACATCGTTTTTTTCCTTTGTCCCATAACATGTACCCTTCCCATT
FD560484       <-- CAAGTCACATCGTTTTTTTCCTTTGTCCCATAACATGTACCCTTCCCATT
FD955626       <-- CAAGTCACATCGTTTTTTTCCTTTGTCCCATAACATGTACCCTTCCCATT
EW724798       <-- CAAGTCACATCGTTCTTTTCCTTTGTCCCATAACATGTACCCTTCCCATT
EY931865       <-- CAAGTCACATCGTTTTTCTCCTTTGTCCCATAACATGTACCCTTCCCATT
FD946939       <-- CAAGTCACATCGTTTTTTTCCTTTGTCCCATAACATGTACCCTTCCCATT
EX748776       <-- CAAGTCACATCGTTTTTT-CCTTTGTCCCATAACATGTGCCCTTCCCATT
EY914969       <-- CAAGTCACATCGTTTTTTTCCTTTGTCCCATAACATGTGCCCTTCCCATT
EY946181       <-- CAAGTCACATCGTTTTTTTCCTTTGTCCCATAACATGTACCCTTCCCATT
FD558898       <-- CAAGTCACATCGTTTTTTTCCTTTGTCCCATAACATGTACCCTTCCCATT
FD957266       <-- CAAGTCACATCGTTTTTTTCCTTTGTCCCATAACATGTACCCTTCCCATT
FD980673       <-- CAAGTCACATCGTTTTTTTCCTTTGTCCCATAACATGTGCCCTTCCCATT
EV527382       <-- CAAGTCACATCGTTTTTTTCCTTTGTCCCATAACATGTGCCCTTCCCATT
FD579024       <-- CAAGTCACATCGTTTTTTTCCTTTGTCCCATAACATGTACCCTTCCCATT
EX890190       <-- .........................................CTTCCCATT
EV571288       --> CAAGTCACATCGTTTTTTTCCTTTGTCCCATAACATGTACCCTCCCCATT
FD958570       --> CAAGTCACATCGTTTTTTTCCTTTGTCCCATAACATGTACCCTTCCCATT
EV532215       --> CAAGTCACATCGTTTTTTTCCTTTGTCCCATAACATGTGCCCTTCCCA--
FD530074       --> CAAGTCACATCGTTTTTTTCCTTTGTCCCATAACATGTACCCTTCCCATT
FD564878       --> CAAGTCACATCGTTTTTTTCCTTTGTCCCATAACATGTACCCTTCCCATT
EW730131       --> CAAGTCACATCGTTCTTTTCCTTTGTCCCATAACATGTACCCTTCCCATT
EY927720       --> CAAGTCACATCGTTTTTCTCCTTTGTCCCATAACATGTACCCTTCCCATT
EX766713       --> CAAGTCACATCGTTTTTTTCCTTTGTCCCATAACATGTACCCTTCCCATT
EY910907       --> CAAGTCACATCGTTTTTTTCCTTTGTCCCATAACATGTGCCCTTCCCATT
EY942325       --> CAAGTCACATCGTTTTTTTCCTTTGTCCCATAACATGTACCCTTCCCATT
FD554704       --> CAAGTCACATCGTTTTTTTCCTTTGTCCCATAACATGTACCCTTCCCATT
FD976534       --> CAAGTCACATCGTTTTTTTCCTTTGTCCCATAACATGTGCCCTTCCCATT
EV531642       --> CAAGTCACATCGTTTTTTTCCTTTGTCCCATAACATGTGCCCTTCCCATT
EX893754       --> .........................................CTTCCCATT

               301    -    351
UN22559        --> AGTTCCGTGTCTCTCAACGCACTTAGCTTGGCATTCAGATTCAACACACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566077       <-- AGTTCCGTGTCTCTCAACGCACTTAGCTTGGCATTCAGATTCAACACACA  Raphanus raphanistrum subsp. landra
FD961907       <-- AGTTCCGTGTCTCTCAACGCGCTTAGCTTGGCATTCAGATTCAACACACA  Raphanus raphanistrum subsp. maritimus
FD540222       <-- AGTTCCGTGTCTCTCAACGCACTTACCTTGGCATTCAGATTCAACACACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD534745       <-- AGTTCCGTGTCTCTCAACGCACTTAGCTTGGCATTCAGATTCAACACACA  Raphanus raphanistrum subsp. maritimus
EV526152       <-- AGTTCCGTGTCTCTCAACGCACTTAGCTTGGCATTCAGATTCAACACACA  Raphanus raphanistrum subsp. maritimus
EX763161       <-- AGTTCCGTGTCTCTCAACGCACTTAGCTTGGCATTCAGATTCAACACACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX888206       <-- AGTCCCGTGTCTCTCAACGCATTTAGCTCGGCATTCAGATTCAACACACA  Raphanus sativus var. oleiformis
EY932692       <-- AGTTCCGTGTCTCTCAACGCATTTAGCTTGGCATTCAGATTCAACACACA  Raphanus sativus var. oleiformis
FD534046       <-- AGTTCCGTGTCTCTCAACGCACTTAGCTTGGCATTCAGATTCAACACACA  Raphanus raphanistrum subsp. maritimus
FD560484       <-- AGTTCCGTGTCTCTCAACGCATTTAGCTTGGCATTCAGATTCAACACACA  Raphanus sativus var. oleiformis
FD955626       <-- AGTTCCGTGTCTCTCAACGCACTTAGCTTGGCATTCAGATTCAACACACA  Raphanus sativus cv Rat-Tail Radish #3870
EW724798       <-- AGTTCCGTGTCTCTCAACGCACTTAGCTTGGCATTCAGATTCAACACACA  Raphanus sativus cv Early Scarlet Globe
EY931865       <-- AGTTCCGTGTCTCTCAACGCATTTAGCTTGGCATTCAGATTCAACACACA  Raphanus sativus var. oleiformis
FD946939       <-- AGTTCCGTGTCTCTCAACGCACTTAGCTTGGCATTCAGATTCAACACACA  Raphanus sativus cv Early Scarlet Globe
EX748776       <-- AGTTCCGTGTCTCTCAACGCACTTAGCTTGGCATTCAGATTCAACACACA  Raphanus raphanistrum subsp. maritimus
EY914969       <-- AGTTCCGTGTCTCTCAACGCACTTAGCTTGGCATTCAGATTCAACACACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY946181       <-- AGTTCCGTGTCTCTCAACGCACTTAGCTTGGCATTCAGATTCAACACACA  Raphanus sativus cv Rat-Tail Radish #3870
FD558898       <-- AGTTCCGTGTCTCTCAACGCACTTAGCTTGGCATTCAGATTCAACACACA  Raphanus raphanistrum subsp. landra
FD957266       <-- AGTTCCGTGTCTCTCAACGCACTTAGCTTGGCATTCAGATTCAACACACA  Raphanus sativus cv Rat-Tail Radish #3870
FD980673       <-- AGTTCCGTGTCTCTCAACGCACTTAGCTTGGCATTCAGATTCAACACACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV527382       <-- AGTTCCGTGTCTCTCAACGCACTTAGCTTGGCATTCAGATTCAACACACA  Raphanus raphanistrum subsp. maritimus
FD579024       <-- AGTTCCGTGTCTCTCAACGCACTTAGCTTGGCATTCAGATTCAACACACA  Raphanus sativus cv Rat-Tail Radish #3870
EX890190       <-- AGTTCCGTGTCTCTCAACGCATTTAGCTTGGCATTCAGATTCAACACACA  Raphanus sativus var. oleiformis
EV571288       --> AGTTCCGTGTCTCTCAACGCACTTAGCTTGGCATTCAGATTCAACACACA  Raphanus raphanistrum subsp. landra
FD958570       --> AGTTCCGTGTCTCTCAACGCGCTTAGCTTGGCATTCAGATTCAACACACA  Raphanus raphanistrum subsp. maritimus
EV532215       --> AGTTCCGTGTCTCTCAACGCACTAAGCTTGGCATTCAGATTCAACACACA  Raphanus raphanistrum subsp. maritimus
FD530074       --> AGTTCCGTGTCTCTCAACGCACTTAGCTTGGCATTCAGATTCAACACACA  Raphanus raphanistrum subsp. maritimus
FD564878       --> AGTTCCGTGTCTCTCAACGCATTTAGCTTGGCATTCAAATTCAACACACA  Raphanus sativus var. oleiformis
EW730131       --> AGTTCCGTGTCTCTCAACGCACTTAGCTTGGCATTCAGATTCAACACACA  Raphanus sativus cv Early Scarlet Globe
EY927720       --> AGTTCCGTGTCTCTCAACGCATTTAGCTTGGCATTCAGATTCAACACACA  Raphanus sativus var. oleiformis
EX766713       --> AGTTCCGTGTCTC.....................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY910907       --> AGTTCCGTGTCTCTCAACGCACTTAGCTTGGCATTCAAATTCAACACACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY942325       --> AGTTCCGTGTCTCTCAACGCACTTAGCTTGGCATTCAAATTCAACACACA  Raphanus sativus cv Rat-Tail Radish #3870
FD554704       --> AGTTCCGTGTCTCTCAACGCACTTAGCTTGGCATTCAAATTCAACACACA  Raphanus raphanistrum subsp. landra
FD976534       --> AGTTCCGTGTCTCTCAACGCACTTAGCTTGGCATTCAGATTCAACACACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV531642       --> AGTTCCGTGTCTCTCAACGCACTTAGCTTGGCATTCAGATTCAACACACA  Raphanus raphanistrum subsp. maritimus
EX893754       --> AGTTCCGTGTCTCTCAACGCATTTAGCTTGGCATTCAGATTCAACACACA  Raphanus sativus var. oleiformis

               351    -    401
UN22559        --> GCCCATTTTTGGCTAAAGGGATATGTCGTTGATTACAGATCTTTTTT-CT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566077       <-- GCCCATTTTTGGCTAAAGGGATATGTCGTTGATTACATATCTTTTTT-CT  Raphanus raphanistrum subsp. landra
FD961907       <-- GCCCATTTTTGGCTAAAGGGATATGTCGTTGATTACAGATCTTTTTTTCT  Raphanus raphanistrum subsp. maritimus
FD540222       <-- GCCCATTTTTGGCTAAAGGGATATGTCGTTGATTACAGATCTTTTTT-CT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD534745       <-- GCCCATTTTTGGCTAAAGGGATATGTCGTTGATTACAGATCTTTTTT-CT  Raphanus raphanistrum subsp. maritimus
EV526152       <-- GCCCATTTTTGGCTAAAGGGATATGTCGTTGATTACAGATCTTTTTT-CT  Raphanus raphanistrum subsp. maritimus
EX763161       <-- GCCCATTTTTGGCTAAAGGGATATGTCGTTGATTACAGATCTTTTTT-CT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX888206       <-- GCCCATTTTTGGCTAAAGGGATATGTCGTTGATTACATATCTTTTTT-CT  Raphanus sativus var. oleiformis
EY932692       <-- GCCCATTTTTGGCTAAAGGGATATGTCGTTGATTACATATCTTTTTT-CT  Raphanus sativus var. oleiformis
FD534046       <-- GCCCATTTTTGGCTAAAGGGATATGTCGTTGATTACAGATCTTTTTT-CT  Raphanus raphanistrum subsp. maritimus
FD560484       <-- GCCCATTTTTGGCTAAAGGGATATGTCGTTGATTACATATCTTTTTTTCT  Raphanus sativus var. oleiformis
FD955626       <-- GCCCATTTTTGGCTAAAGGGATATGTCGTTGATTACAGATCTTTTTT-CT  Raphanus sativus cv Rat-Tail Radish #3870
EW724798       <-- ACCCACTTTTGGCTAAAGGGATATGTCGTTGATTACAGATCTTTTTT-CT  Raphanus sativus cv Early Scarlet Globe
EY931865       <-- GCCCATTTTTGGCTAAAGGGATATGTCGTTGATTACATATCTTTTTT-CT  Raphanus sativus var. oleiformis
FD946939       <-- ACCCATTTTTGGCTAAAGGGATATGTCGTTGATTACAGATCTTTTTT-CT  Raphanus sativus cv Early Scarlet Globe
EX748776       <-- GCCCATTTTTGGCTAAAGGGATAT..........................  Raphanus raphanistrum subsp. maritimus
EY914969       <-- GCCCATTTTTGGCTAAAGGGATATGTCGTTGATTACAGATCTTTTTT-CT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY946181       <-- GCCCATTTTTGGCTAAAGGGATATGTCGTTGATTACAGATCTTTTTT-CT  Raphanus sativus cv Rat-Tail Radish #3870
FD558898       <-- GCCCATTTTTGGCTAAAGGGATATGTCGTTGATTACATATCTTTTTT-CT  Raphanus raphanistrum subsp. landra
FD957266       <-- GCCCATTTTTGGCTAAAGGGATATGTCGTTGATTACAGATCTTTTTT-CT  Raphanus sativus cv Rat-Tail Radish #3870
FD980673       <-- GCCCATTTTTGGCTAAAGGGATATGTCGTTGATTACAGATCTTTTTT-CT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV527382       <-- GCCCATTTTTGGCTAAAGGGATATGTCGTTGATTACAGATCTTTTTT-CT  Raphanus raphanistrum subsp. maritimus
FD579024       <-- GCCCATTTTTGGCTAAAGGGATATGTCGTTGATTACAGATCTTTTTT-CT  Raphanus sativus cv Rat-Tail Radish #3870
EX890190       <-- GCCCATTTTTGGCTAAAGGGATATGTCGTTGATTACATATCTTTTTTTCT  Raphanus sativus var. oleiformis
EV571288       --> GCCCATTTTTGGCTAAAGGGATATGTCGTTGATTACATATCTTTTTT-CT  Raphanus raphanistrum subsp. landra
FD958570       --> GCCCATTTTTGGCTAAAGGGATATGTCGTTGATTACAGATCTTTTTTTCT  Raphanus raphanistrum subsp. maritimus
EV532215       --> GCCCATTTTTGGCTAAAGGGATATGTCGTTGATTACAGATCTTTTTT-CT  Raphanus raphanistrum subsp. maritimus
FD530074       --> GCCCATTTTTGGCTAAAGGGATATGTCGTTGATTACAGATCTTTTTT-CT  Raphanus raphanistrum subsp. maritimus
FD564878       --> GCCCATTTTTGGCTAAAGGGATATGTCGTTGATTACATATCTTTTTTTCT  Raphanus sativus var. oleiformis
EW730131       --> ACCCACTTTTGGCTAAAGGGATATGTCGTTGATTACAGATCTTTTTT-CT  Raphanus sativus cv Early Scarlet Globe
EY927720       --> GCCCATTTTTGGCTAAAGGGATATGTCGTTGATTACATATCTTTTTT-CT  Raphanus sativus var. oleiformis
EX766713       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY910907       --> GCCCATTTTTGGCTAAAGGGATATGTCGTTGATTACAGATCTTTTTT-CT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY942325       --> GCCCATTTTTGGCTAAAGGGATATGTCGTTGATTACAAATCTTTTTT-CT  Raphanus sativus cv Rat-Tail Radish #3870
FD554704       --> GCCCATTTTTGGCTAAAGGGATATGTCGTTGATTACATATCTTTTTT-CT  Raphanus raphanistrum subsp. landra
FD976534       --> GCCCATTTTTGGCTAAAGGGATATGTCGTTGATTACAGATCTTTTTT-CT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV531642       --> GCCCATTTTTGGCTAAAGGGATATGTCGTTGATTACAGATCTTTTTT-CT  Raphanus raphanistrum subsp. maritimus
EX893754       --> GCCCATTTTTGGCTAAAGGGATATGTCGTTGATTACATATCTTTTTTTCT  Raphanus sativus var. oleiformis

               401    -    451
UN22559        --> TTCTTGTGCATTTGCCATCGTTCCTAGCACAAGAATGATGAAGATAGTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566077       <-- TTCTTGTGCATTTGCCATCGTTCCTAGCACAAGAATGATGAAGATAGTTA
FD961907       <-- TTCTTGTGCATTTGCCATCGTTCCTAGCACGAGAATGATGAAGATAGTTA
FD540222       <-- TTCTTGTGCATTTGCCATCGTTCCTAGCACAAGAATGATGAAGATAATTA
FD534745       <-- TTCTTGTGCATTTGCCATCGTTCCTAGCACAAGAATGATGAAGATAGTTA
EV526152       <-- TTCTTGTGCATTTGCCATCGTTCCTAGCACAAGAATGATGAAGATAGTTA
EX763161       <-- TTCTTGTGCATTTGCCATCGTTCCTAGCACAAGAATGGTGAAGATAGTTA
EX888206       <-- TTCTTGTGCATTTGCCATCGTTCCTAGCACAAGAATGATGAAGATAGTTA
EY932692       <-- TTCTTGTGCATTTGCCATCGTTCCTAGCACAAGAATGATGAAGATAGTTA
FD534046       <-- TTCTTGTGCATTTGCCATCGTTCCTAGCACAAGAATGATGAAGATAGTTA
FD560484       <-- TTCTTGTGCATTTGCCATCGTTCCTAGCACAAGAATGATGAAGATAGTTA
FD955626       <-- TTCTTGTGCATTTGCCATCGTTCCTAGCACAAGAATGATGAAGATAGTTA
EW724798       <-- TTCTTGTGCATTTGCCATCGTTCCTAGCACAAGAATGATGAAGATAGTTA
EY931865       <-- TTCTTGTGCATTTGCCATCGTTCCTAGCACAAGAATGATGAAGATAGTTA
FD946939       <-- TTCTTGTGCATTTGCCATCGTTCCTAGCACAAGAATGATGAAGATAGTTA
EX748776       <-- ..................................................
EY914969       <-- TTCTTGTGCATTTGCCATCGTTCCTAGCACAAGAATGATGAAGATAGTTA
EY946181       <-- TTCTTGTGCATTTGCCATCGTTCCTAGCACAAGAATGATGAAGATAGTTA
FD558898       <-- TTCTTGTGCATTTGCCATCGTTCCTAGCACAAGAATGATGAAGATAGTTA
FD957266       <-- TTCTTGTGCATTTGCCATCGTTCCTAGCACAAGAATGATGAAGATAGTTA
FD980673       <-- TTCTTGTGCATTTGCCATCGTTCCTAGCACAAGAATGATGAAGATAGTTA
EV527382       <-- TTCTTGTGCATTTGCCATCc..............................
FD579024       <-- TTCTTGTGCATTTGCCATCGTTCCTAGCACAAGAATGATGAAGATAGTTA
EX890190       <-- TTCTTGTGCATTTGCCATCGTTCCTAGCACAAGAATGATGAAGATAGTTA
EV571288       --> TTCTTGTGCATTTGCCATCGTTCCTAGCACAAGAATGATGAAGATAGTTA
FD958570       --> TTCTTGTGCATTTGCCATCGTTCCTAGCACGAGAATGATGAAGATAGTTA
EV532215       --> TTCTTGTGCATTTGCCATCGTTCCTAGCACAAGAATGATGAAAATAGTTA
FD530074       --> TTCTTGTGCATTTGCCATCGTTCCTAGCACAA..................
FD564878       --> TTCTTGTGCATTTGCCATCGTTCCTAGCACAAGAATGATGAAAATAGTTA
EW730131       --> TTCTTGTGCATTTGCCATCGTTCCTAGCACAAGAATGATGAAGATAGTTA
EY927720       --> TTCTTGTGCATTTGCCATCGTTCCTAGCACAAGAATGATGAAGATAGTTA
EX766713       --> ..................................................
EY910907       --> TTCTTGTGCATTTGCCATCGTTCCTAGCACAAGAATGATGAAGATAGTTA
EY942325       --> TTCTTGTGCATTTGCCATCGTTCCTAGCACAAAAATGATGAAAATAGTTA
FD554704       --> TTCTTGTGCATTTGCCATCGTTCCTAGCACAAGAATGATGAAAATAGTTA
FD976534       --> TTCTTGTGCATTTGCCATCGTTCCTAGCACAAGAATGATGAAGATAGTTA
EV531642       --> TTCTTGTGCATTTGCCATCc..............................
EX893754       --> TTCTTGTGCATTTGCCATCGTTCCTAGCACAAGAATGATGAAGATAGTTA

               451    -    501
UN22559        --> AGACTGTAAACGATAGTTGAGGAGCTTTCTTCATCATATATGACAGAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566077       <-- AGACTGTAAACGATAGTTGGGGAGCTTTCTTCATCATATATGACAGAAAT  Raphanus raphanistrum subsp. landra
FD961907       <-- AGACTGTAAACGATAGTTGAGGAGCTTTCTTCATCATATATGACAAAAAT  Raphanus raphanistrum subsp. maritimus
FD540222       <-- AGACTGTAAACGATAG--TAGGAGCTTTCTTCATCATATATGACAGAAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD534745       <-- AGACTGTAAACGATAGTTGAGGAGCTTTCTTCATCATATATGACAAAAAT  Raphanus raphanistrum subsp. maritimus
EV526152       <-- AGACTGTAAACGATAGTTGAGGAGCTTTCTTCATCATATATGACAAAAAT  Raphanus raphanistrum subsp. maritimus
EX763161       <-- AGACTGTAAACGATAGTTGAGGAGCTTTCTTCATCATATATGACAGAAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX888206       <-- AGACTGTAAACGATAGTTGAGGAGCTTTCTTCATCATATATGACAGAAAT  Raphanus sativus var. oleiformis
EY932692       <-- AGACTGTAAACGATAGTTGAGGAGCTTTCTTCATCATATATGACAGAAAT  Raphanus sativus var. oleiformis
FD534046       <-- AGACTGTAAACGATAGTTGAGGAGCTTTCTTCATCATATATGACAAAAAT  Raphanus raphanistrum subsp. maritimus
FD560484       <-- AGACTGTAAACGATAGTTGAGGAGCTTTCTTCATCATATATGACAGAAAT  Raphanus sativus var. oleiformis
FD955626       <-- AGACTGTAAACGATAGTTGAGGAGCTTTCTTCATCATATATGACAGAAAT  Raphanus sativus cv Rat-Tail Radish #3870
EW724798       <-- AGACTGTAAACGATAGTTGAGGAGCTTTCTTCATCATATATGACAGAAAT  Raphanus sativus cv Early Scarlet Globe
EY931865       <-- AGACTGTAAACGATAGTTGAGGAGCTTTCTTCATCATATATGACAGAAAT  Raphanus sativus var. oleiformis
FD946939       <-- AGACTGTAAACGATAGTTGAGGAGCTTTCTTCATCATATATGACAGAAAT  Raphanus sativus cv Early Scarlet Globe
EX748776       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY914969       <-- AGACTGTAAACGATAGTTGAGGAGCTTTCTTCATCATATATGACAGAAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY946181       <-- AGAATGTAAACGATAGTTGAGGAGCTTTCTTCATCATATATGACAGAAAT  Raphanus sativus cv Rat-Tail Radish #3870
FD558898       <-- AGACTGTAAACGATAGTTGAGGAGCTTTCTTCATCATATATGACAGAAAT  Raphanus raphanistrum subsp. landra
FD957266       <-- AGACTGTAAACGATAGTTGAGGAGCTTTCTTCATCATATATGACAGAAAT  Raphanus sativus cv Rat-Tail Radish #3870
FD980673       <-- AGACTGTAAACGATAGTTGAGGAGCTTTCTTCATCATATATGACAGAAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV527382       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD579024       <-- AGACTGTAAACGATAGTTGAGGAGCTTTCTTCATCATATATGACAGAAAT  Raphanus sativus cv Rat-Tail Radish #3870
EX890190       <-- AGACTGTAAACGATAGTTGAGGAGCTTTCTTCATCATATATGACAGAAAT  Raphanus sativus var. oleiformis
EV571288       --> AGACTGTAAACGATAGTTGGGGAGCTTTCTTCATCATATATGACAGAAAT  Raphanus raphanistrum subsp. landra
FD958570       --> AGACTGTAAACGATAGTTGAGGAGCTTTCTTCATCATATATGACAAAAAT  Raphanus raphanistrum subsp. maritimus
EV532215       --> AGACTGTAAACGATAGTTGAGGAGCTTTCTTCATCATATATGACAAAAAT  Raphanus raphanistrum subsp. maritimus
FD530074       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD564878       --> AAACTGTAAACGATAGTTGAGGAGCTTTCTTCATCATATATGACAGAAAT  Raphanus sativus var. oleiformis
EW730131       --> AGACTGTAAACGATAGTTGAGGAGCTTTCTTCATCATATATGACAGAAAT  Raphanus sativus cv Early Scarlet Globe
EY927720       --> AGACTGTAAACGATAGTTGAGGAGCTTTCTTCATCATATATGACAGAAAT  Raphanus sativus var. oleiformis
EX766713       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY910907       --> AGACTGTAAACGATAGTTGAGGAGCTTTCTTCATCATATATGACAGAAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY942325       --> AAAATGTAAACGATAGTTGAGGAGCTTTCTTCATCATATATGACAAAAAT  Raphanus sativus cv Rat-Tail Radish #3870
FD554704       --> AGACTGTAAACGATAGTTGAGGAGCTTTCTTCATCATATATGACAGAAAT  Raphanus raphanistrum subsp. landra
FD976534       --> AGACTGTAAACGATAGTTGAGGAGCTTTCTTCATCATATATGACAGAAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV531642       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX893754       --> AGACTGTAAACGATAGTTGAGGAGCTTTCTTCATCATATATGACAGAAAT  Raphanus sativus var. oleiformis

               501    -    551
UN22559        --> GAATTGATAATGGTTTTATAATCTTAAAGGAAAGGTGATGTATT--TTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566077       <-- GAATTGATAATGGTTTTATAATCTTAAAGGAAAGGTGATGTATT--TTTT  Raphanus raphanistrum subsp. landra
FD961907       <-- GAATTGATAATGGTTTTATAATCTTAAAGGAAAGGTGATGTATT--TTTT  Raphanus raphanistrum subsp. maritimus
FD540222       <-- GAATTGATAATGGTTTTATAATCTTAAAGGAAAGGTGATGTATT--TTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD534745       <-- GAATTGATAATGGTTTTATAATCTTAAAGGAAAGGTGATGTATT--TTTT  Raphanus raphanistrum subsp. maritimus
EV526152       <-- GAATTGATAATGGTTTTATAATCTTAAAGGAAAGGTGATGTATT--TTTT  Raphanus raphanistrum subsp. maritimus
EX763161       <-- GAATTGATAATGGTTTTATAATCTTAAAGGAAAGGTGATGTATTATTTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX888206       <-- GAATTGATAATGGTTTTATAATCTTAAAGGAAAGGTGATGTATT--TTTT  Raphanus sativus var. oleiformis
EY932692       <-- GAATTGATAATGGTTTTATAATCTTAAAGGAAAGGTGATGTATT--TTTT  Raphanus sativus var. oleiformis
FD534046       <-- GAATTGATAATGGTTTTATAATCTTAAAGGAAAGGTGATGTATT--TTTT  Raphanus raphanistrum subsp. maritimus
FD560484       <-- GAATTGATAATGGTTTTATAATCTTAAAGGAAAGGTGATGTATT--TTTT  Raphanus sativus var. oleiformis
FD955626       <-- GAATTGATAATGGTTTTATAATCTTAAAGGAAAGGTGATGTATT--TTTT  Raphanus sativus cv Rat-Tail Radish #3870
EW724798       <-- GAATTGATAATGGTTTTATAATCTTAAAGGAAAGGTGATGTATT--TTTT  Raphanus sativus cv Early Scarlet Globe
EY931865       <-- GAATTGATAATGGTTTTATAATCTTAAAGGAAAGGTGATGTATT--TTTT  Raphanus sativus var. oleiformis
FD946939       <-- GAATTGATAATGGTTTTATAATCTTAAAGGAAAGGTGATGTATT--TTTT  Raphanus sativus cv Early Scarlet Globe
EX748776       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY914969       <-- GAATTGATAATGGTTTTATAATCTTAAAGGAAAGGTGATGTATT-ATTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY946181       <-- GAATTGATAATGGTTTTATAATCTTAAAGGAAAGGTGATGTATT--TTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD558898       <-- GAATTGATAATGGTTTTATAATCTTAAAGGAAAGGTGATGTATT--TTTT  Raphanus raphanistrum subsp. landra
FD957266       <-- GAATTGATAATGGTTTTATAATCTTAAAGGAAAGGTGATGTATT--TTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD980673       <-- GAATTGATAATGGTTTTATAATCTTAAAGGAAAGGTGATGTATT-ATTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV527382       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD579024       <-- GAATTGATAATGGTTTTATAATCTTAAAGGAAAGGTGATGTATT--TTTT  Raphanus sativus cv Rat-Tail Radish #3870
EX890190       <-- GAGTTGATAATGGTTTTATAATCTTAAAGGAAAGGTGATGTATT--TTTT  Raphanus sativus var. oleiformis
EV571288       --> GAATTGATAATGGTTTTATAATCTTAAAGGAAAGGTGATGTATT--TTTT  Raphanus raphanistrum subsp. landra
FD958570       --> GAATTGATAATGGTTTTATAATCTTAAAGGAAAGGTGATGTATT--TTTT  Raphanus raphanistrum subsp. maritimus
EV532215       --> GAATTGATAATGGTTTTATAATCTTAAAGGAAAGGTGATGTATT-ATTTT  Raphanus raphanistrum subsp. maritimus
FD530074       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD564878       --> GAATTGATAATGGTTTTATAATCTTAAAGGAAAGGTGATGTATT--TTTT  Raphanus sativus var. oleiformis
EW730131       --> GAATTGATAATGGTTTTATAATCTTAAAGGAAAGGTGATGTATT--TTTT  Raphanus sativus cv Early Scarlet Globe
EY927720       --> GAATTGATAATGGTTTTATAATCTTAAAGGAAAGGTGATGTATT--TTTT  Raphanus sativus var. oleiformis
EX766713       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY910907       --> GAATTGATAATGGTTTTATAATCTTAAAGGAAAGGTGATGTATT-ATTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY942325       --> GAATTGATAATGGTTTTATAATCTTAAAGGAAAGGTGATGTATT--TTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD554704       --> GAATTGATAATGGTTTTATAATCTTAAAGGAAAGGTGATGTATT--TTTT  Raphanus raphanistrum subsp. landra
FD976534       --> GAATTGATAATGGTTTTATAATCTTAAAGGAAAGGTGATGTATT-ATTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV531642       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX893754       --> GAGTTGATAATGGTTTTATAATCTTAAAGGAAAGGTGATGTATT--TTTT  Raphanus sativus var. oleiformis

               551    -    601
UN22559        --> TTTTT-AATAAAAAA..
                   ~~~~~~~~~~~~~~~~~
EV566077       <-- TTTTaat..........  Raphanus raphanistrum subsp. landra
FD961907       <-- TTTTT-AATAAAAAA..  Raphanus raphanistrum subsp. maritimus
FD540222       <-- TT--T-AATAAAAAA..  Raphanus raphanistrum subsp. raphanistrum (MS)
FD534745       <-- TTTTTTAATAAAAAA..  Raphanus raphanistrum subsp. maritimus
EV526152       <-- TTTTT-AAT........  Raphanus raphanistrum subsp. maritimus
EX763161       <-- TTTTT-AATAAAAA...  Raphanus raphanistrum subsp. raphanistrum (NY)
EX888206       <-- TTTT.............  Raphanus sativus var. oleiformis
EY932692       <-- TTTT--AATAAAAAA..  Raphanus sativus var. oleiformis
FD534046       <-- TTTTT-AATAAAAAA..  Raphanus raphanistrum subsp. maritimus
FD560484       <-- TTTTT-AATAAAAAA..  Raphanus sativus var. oleiformis
FD955626       <-- TTTT--AATAAAAAA..  Raphanus sativus cv Rat-Tail Radish #3870
EW724798       <-- TTTTaat..........  Raphanus sativus cv Early Scarlet Globe
EY931865       <-- TTTT--AATAAAAAA..  Raphanus sativus var. oleiformis
FD946939       <-- TTTT--AATAAAAAA..  Raphanus sativus cv Early Scarlet Globe
EX748776       <-- .................  Raphanus raphanistrum subsp. maritimus
EY914969       <-- TTTTT-AATAAAAA...  Raphanus raphanistrum subsp. raphanistrum (NY)
EY946181       <-- TTTTTTAATAAAAAA..  Raphanus sativus cv Rat-Tail Radish #3870
FD558898       <-- TTTTTtttaataaaaaa  Raphanus raphanistrum subsp. landra
FD957266       <-- TTTTT-AATAAAAAA..  Raphanus sativus cv Rat-Tail Radish #3870
FD980673       <-- TTTTT-AATAAAAA...  Raphanus raphanistrum subsp. raphanistrum (NY)
EV527382       <-- .................  Raphanus raphanistrum subsp. maritimus
FD579024       <-- TT--T-AATAAAAAA..  Raphanus sativus cv Rat-Tail Radish #3870
EX890190       <-- TTTTT-AATAAAAAA..  Raphanus sativus var. oleiformis
EV571288       --> TTTTaat..........  Raphanus raphanistrum subsp. landra
FD958570       --> TTTTT-AATAAAAAA..  Raphanus raphanistrum subsp. maritimus
EV532215       --> TTTTT-AAT........  Raphanus raphanistrum subsp. maritimus
FD530074       --> .................  Raphanus raphanistrum subsp. maritimus
FD564878       --> TTTTT-AATAAAAAA..  Raphanus sativus var. oleiformis
EW730131       --> TTTTaat..........  Raphanus sativus cv Early Scarlet Globe
EY927720       --> TTTT--AATAAAAAA..  Raphanus sativus var. oleiformis
EX766713       --> .................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY910907       --> TTTTT-AATAAAAA...  Raphanus raphanistrum subsp. raphanistrum (NY)
EY942325       --> TTTTTTAATAAAAAA..  Raphanus sativus cv Rat-Tail Radish #3870
FD554704       --> TTTTTtttaataaaaaa  Raphanus raphanistrum subsp. landra
FD976534       --> TTTTT-AATAAAAA...  Raphanus raphanistrum subsp. raphanistrum (NY)
EV531642       --> .................  Raphanus raphanistrum subsp. maritimus
EX893754       --> TTTTT-AATAAAAAA..  Raphanus sativus var. oleiformis