RadishBase

| | | |
Alignment for radish unigene UN22561

               1      -     51
UN22561        --> GGAATCTAGGGTTTACGCACGCCACTGAGAGTTCA-TCGCAGAGAACACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529384       <-- .............gACGCACGCCACTGAGAGTTCA-TCGCAGAGAACACA
EV529804       <-- ............ggACGCACGCCACTGAGAGTTCA-TCGCAGAGAACACA
EV529539       <-- ................ggACGCCACTGAGAGTTCA-TCGCAGAGAACACA
EV532120       <-- ..................................................
EX891467       <-- ..................................................
EV543522       <-- ..................................................
FD961274       <-- ..................................................
EV573867       <-- ..................................................
EX766445       <-- ..................................................
EX768586       <-- ..................................................
EY893362       <-- ..................................................
EX767280       <-- ..................................................
FD961641       <-- ..................................................
FD546818       <-- ..................................................
EV569291       --> GGAATCTAGGGTTTACGCACGCCACTGAGAGTTCA-TCGCAGAGAACACA
EV524377       --> ............ggACGCACGCCACTGAGAGTTCA-TCGCAGAGAACACA
EV524932       --> ............ggACGCACGCCACTGAGAGTTCA-TCGCAGAGAACACA
EX762093       --> ............ggACGCACGCCACTGAGAGTTCA-TCGCAGAGAACACA
EX763152       --> .............gACGCACGCCACTGAGAGTTCA-TCGCAGAGAACACA
EY896928       --> ............ggACGCACGCCACTGAGAGTTCA-TCGCAGAGAACACA
FD550919       --> ............ggACGCACGCCACTGAGAGTTCA-TCGCAGAGAACACA
EX887290       --> .............gggcCACGCCACTGAGAGTTCAATCGCAGAGAACACA
EV547694       --> ...............gggACGCCACTGAGAGTTCA-TCGCAGAGAACACA
EX764722       --> ................ggACGCCACTGAGAGTTCA-TCGCAGAGAACACA
EY905193       --> ................ggACGCCACTGAGAGTTCA-TCGCAGAGAACACA
FD532350       --> ................ggACGCCACTGAGAGTTCA-TCGCAGAGAACACA
EV524571       --> ....................GCCACTGAGAGTTCA-TCGCAGAGAACACA
FY432022       --> ..................................................
FY443410       --> ..................................................
FY443618       --> ..................................................
FD965573       --> ..................................................
FD966075       --> ..................................................
EW724457       --> ..................................................
FD946480       --> ..................................................
EV528022       --> ..................................................

               51     -    101
UN22561        --> GAGAGA-ACAGAGAAAATGCCGGCGGCTAAGCAGAGGACCCCGAAAGTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529384       <-- GAGAGA-ACAGAGAAAATGCCGGCGGCTAAGCAGAGGACCCCGAAAGTAA
EV529804       <-- GAGAGA-ACAGAGAAAATGCCGGCGGCTAAGCAGAGGACCCCGAAAGTAA
EV529539       <-- GAGAGA-ACAGAGAAAATGCCGGCGGCTAAGCAGAGGACCCCGAAAGTAA
EV532120       <-- ...........................................AAAGTAA
EX891467       <-- ..................................................
EV543522       <-- ..................................................
FD961274       <-- ..................................................
EV573867       <-- ..................................................
EX766445       <-- ..................................................
EX768586       <-- ..................................................
EY893362       <-- ..................................................
EX767280       <-- ..................................................
FD961641       <-- ..................................................
FD546818       <-- ..................................................
EV569291       --> CAGAGAGACAGAGAAAATGCCGGCGGCTAAGCAGAGGACCCCGAAAGTAA
EV524377       --> GAGAGA-ACAGAGAAAATGCCGGCGGCTAAGCAGAGGACCCCGAAAGTAA
EV524932       --> GAGAGA-ACAGAGAAAATGCCGGCGGCTAAGCAGAGGACCCCGAAAGTAA
EX762093       --> GAGAGA-ACAGAGAAAATGCCGGCGGCTAAGCAGAGGACCCCGAAAGTAA
EX763152       --> GAGAGA-ACAGAGAAAATGCCGGCGGCTAAGCAGAGGACCCCGAAAGTAA
EY896928       --> GAGAGA-ACAGAGAAAATGCCGGCGGCTAAGCAGAGGACCCCGAAAGTAA
FD550919       --> GAGAGA-ACAGAGAAAATGCCGGCGGCTAAGCAGAGGACCCCGAAAGTAA
EX887290       --> GAG-TA-ACAGAGAAAATGCCGGCGGCTAAGCAGAGGACCCCCAAAGTAA
EV547694       --> GAGAGA-ACAGAGAAAATGCCGGCGGCTAAGCAGAGGACCCCGAAAGTAA
EX764722       --> GAGAGA-ACAGAGAAAATGCCGGCGGCTAAGCAGAGGACCCCGAAAGTAA
EY905193       --> CAGAGAGACAGAGAAAATGCCGGCGGCTAAGCAGAGGACCCCGAAAGTGA
FD532350       --> GAGAGA-ACAGAGAAAATGCCGGCGGCTAAGCAGAGGACCCCGAAAGTAA
EV524571       --> GAGAGA-ACAGAGAAAATGCCGGCGGCTAAGCAGAGGACCCCGAAAGTAA
FY432022       --> ....gagACAGAGAAA-TGCCGGCGGCTAAGCAGAGGACCCCTAAAGTAA
FY443410       --> ...........gagAAATGCCGGCGGCTAAGCAGAGGACCCCTAAAGTAA
FY443618       --> ................ATGCCGGCGGCTAAGCAGAGGACCCCTAAAGTAA
FD965573       --> ...........................TAAGCAGAGGACCCCGAAAGTAA
FD966075       --> ...........................TAAGCAGAGGACCCCGAAAGTAA
EW724457       --> ..................................................
FD946480       --> ..................................................
EV528022       --> ..................................................

               101    -    151
UN22561        --> GCCGGAACCCCGATCTTATCAGGGGCGTCGGCAAATACTCTCGCTCCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529384       <-- GTCGGAACCCCGATCTTATCAGGGGCGTCGGCAAATACTCTCGCTCCCAA  Raphanus raphanistrum subsp. maritimus
EV529804       <-- GCCGGAACCCCGATCTTATCAGGGGCGTCGGCAAATACTCTCGCTCCCAA  Raphanus raphanistrum subsp. maritimus
EV529539       <-- GCCGGAACCCCGATCTTATCAGGGGCGTCGGCAAATACTCTCGCTCCCAA  Raphanus raphanistrum subsp. maritimus
EV532120       <-- GCCGGAACCCCGATCTTATCAGGGGCGTCGGCAAATACTCTCGCTCCCAA  Raphanus raphanistrum subsp. maritimus
EX891467       <-- .......aCCCGATCTGATCAGGGGCGTCGGCAAATACTCTCGCTCCCAA  Raphanus sativus var. oleiformis
EV543522       <-- ....................AGGGGCGTCGGCAAATACTCTCGCTCCCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961274       <-- .....................GGGGCGTCGGCAAATACTCTCGCTCCCAA  Raphanus raphanistrum subsp. maritimus
EV573867       <-- ....................agaGGCGTCGGCAAATACTCTCGCTCTCAA  Raphanus raphanistrum subsp. landra
EX766445       <-- ...........................TCGGCAAATACTCTCGCTCCCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768586       <-- ......................................TCTCGCTCCCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893362       <-- ................................................AA  Raphanus raphanistrum subsp. maritimus
EX767280       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961641       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD546818       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV569291       --> GCCGGAACCCTGATCTGATCAGAGGCGTCGGCAAATACTCTCGCTCTCAA  Raphanus raphanistrum subsp. landra
EV524377       --> GTCGGAACCCCGATCTTATCAGGGGCGTCGGCAAATACTCTCGCTCCCAA  Raphanus raphanistrum subsp. maritimus
EV524932       --> GCCGGAACCCCGATCTTATCAGGGGCGTCGGCAAATACTCTCGCTCCCAA  Raphanus raphanistrum subsp. maritimus
EX762093       --> GCCGGAACCCCGATCTTATCAGGGGCGTCGGCAAATACTCTCGCTCCCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX763152       --> GCCGGAACCCCGATCTTATCAGGGGCGTCGGCAAATACTCTCGCTCCCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY896928       --> GCCGGAACCCCGATCTTATCAGGGGCGTCGGCAAATACTCTCGCTCCCAA  Raphanus raphanistrum subsp. maritimus
FD550919       --> GCCGGAACCCCGATCTTATCAGGGGCGTCGGCAAATACTCTCGCTCCCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX887290       --> GCCGGAACCCCGATCTGATCAGGGGCGTCGGCAAATACTCTCGCTCCCAA  Raphanus sativus var. oleiformis
EV547694       --> GCCGGAACCCCGATCTTATCAGGGGCGTCGGCAAATACTCTCGCTCCCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764722       --> GCCGGAACCCCGATCTTATCAGGGGCGTCGGCAAATACTCTCGCTCCCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY905193       --> GCCGGAACCCTGATCTGATCAGAGGCGTCGGCAAATACTCTCGCTCCCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD532350       --> GCCGGAACCCCGATCTTATCAGGGGCGTCGGCAAATACTCTCGCTCCCAA  Raphanus raphanistrum subsp. maritimus
EV524571       --> GCCGGAACCCCGATCTTATCAGGGGCGTCGGCAAATACTCTCGCTCCCAA  Raphanus raphanistrum subsp. maritimus
FY432022       --> GCCGGAACCCCGATCTGATCAGGGGCGTCGGAAAATACTCTCGCTCCCAA  Raphanus sativus cv GSK3-1
FY443410       --> GCCGGAACCCCGATCTGATCAGGGGCGTCGGAAAATACTCTCGCTCCCAA  Raphanus sativus cv GSK3-1
FY443618       --> GCCGGAACCCCGATCTGATCAGGGGCGTCGGAAAATACTCTCGCTCCCAA  Raphanus sativus cv GSK3-1
FD965573       --> GCCGGAACCCCGATCTTATCAGGGGCGTCGGCAAATACTCTCGCTCCCAA  Raphanus raphanistrum subsp. maritimus
FD966075       --> GCCGGAACCCCGATCTTATCAGGGGCGTCGGCAAATACTCTCGCTCCCAA  Raphanus raphanistrum subsp. maritimus
EW724457       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD946480       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV528022       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               151    -    201
UN22561        --> ATGTACCACAAGAGAGGTTTGTGGGCAATCAAGGCCAAAAACGGCGGCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529384       <-- ATGTACCACAAGAGAGGTTTGTGGGCAATCAAGGCCAAAAACGGCGGCGT
EV529804       <-- ATGTACCACAAGAGAGGTTTGTGGGCAATCAAGGCCAAAAACGGCGGCGT
EV529539       <-- ATGTACCACAAGAGAGGTTTGTGGGCAATCAAGGCCAAAAACGGCGGCGT
EV532120       <-- ATGTACCACAAGAGAGGTTTGTGGGCAATCAAGGCCAAAAACGGCGGTGT
EX891467       <-- ATGTACCACAAGAGAGGTTTGTGGGCAATCAAGGCCAAAAACGGCGGCGT
EV543522       <-- ATGTACCACAAGAGAGGTTTGTGGGCAATCAAGGCCAAAAACGGCGGCGT
FD961274       <-- ATGTACCACAAGAGAGGTTTGTGGGCAATCAAGGCCAAAAACGGCGGCGT
EV573867       <-- ATGTACCACAAGAGAGGTTTGTGGGCAATCAAGGCCAAAAACGGCGGCGT
EX766445       <-- ATGTACCACAAGAGAGGTTTGTGGGCAATCAAGGCCAAAAACGGCGGCGT
EX768586       <-- -TGTACCACAAGAGAGGTTTGTGGGCAATCAAGGCCAAAAACGGCGGCGT
EY893362       <-- ATGTACCACAAGAGAGGTTTGTGGGCAATCAAGGCCAAAAACGGCGGCGT
EX767280       <-- ..................................CCAAAAACGGCGGCGT
FD961641       <-- ..................................................
FD546818       <-- ..................................................
EV569291       --> ATGTACCACAAGAGAGGTTTGTGGGCAATCAAGGCCAAAAACGGCGGCGT
EV524377       --> ATGTACCACAAGAGAGGTTTGTGGGCAATCAAGGCCAAAAACGGCGGCGT
EV524932       --> ATGTACCACAAGAGAGGTTTGTGGGCAATCAAGGCCAAAAACGGCGGCGT
EX762093       --> ATGTACCACAAGAGAGGTTTGTGGGCAATCAAGGCCAAAAACGGCGGCGT
EX763152       --> ATGTACCACAAGAGAGGTTTGTGGGCAATCAAGGCCAAAAACGGCGGCGT
EY896928       --> ATGTACCACAAGAGAGGTTTGTGGGCAATCAAGGCCAAAAACGGCGGCGT
FD550919       --> ATGTACCACAAGAGAGGTTTGTGGGCAATCAAGGCCAAAAACGGCGGCGT
EX887290       --> ATGTACCACAAGAGAGGTTTGTGGGCAATCAAGGCCAAAAACGGCGGCGT
EV547694       --> ATGTACCACAAGAGAGGTTTGTGGGCAATCAAGGCCAAAAACGGCGGCGT
EX764722       --> ATGTACCACAAGAGAGGTTTGTGGGCAATCAAGGCCAAAAACGGCGGCGT
EY905193       --> ATGTACCACAAGAGAGGTTTGTGGGCAATCAAGGACAAAAACGGCGGCGC
FD532350       --> ATGTACCACAAGAGAGGTTTGTGGGCAATCAAGGCCAAAAACGGCGGCGT
EV524571       --> ATGTACCACAAGAGAGGTTTGTGGGCAATCAAGGCCAAAAACGGCGGCGT
FY432022       --> ATGTACCACAAGAGGGGGTTGTGGGCAATCAAGGCCAAAAACGGCGGCGT
FY443410       --> ATGTACCACAAGAGGGGGTTGTGGGCAATCAAGGCCAAAAACGGCGGCGT
FY443618       --> ATGTACCACAAGAGGGGGTTGTGGGCAATCAAGGCCAAAAACGGCGGCGT
FD965573       --> ATGTACCACAAGAGAGGTTTGTGGGCAATCAAGGCCAAAAACGGCGGCGT
FD966075       --> ATGTACCACAAGAGAGGTTTGTGGGCAATCAAGGCCAAAAACGGCGGCGT
EW724457       --> ......................................gAACGGCGGCGT
FD946480       --> ..................................................
EV528022       --> ..................................................

               201    -    251
UN22561        --> TTTCCCCCGTCACGACGCTAAGTCCAAGGTCGAAGCTCTGGTTGAGAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529384       <-- TTTCCCCCGTCACGACGCTAAGTCCAAGGTCGAAGCTCTGGTTGAGAAGC  Raphanus raphanistrum subsp. maritimus
EV529804       <-- TTTCCCCCGTCACGACGCTAAGTCCAAGGTCGAAGCTCTGGTTGAGAAGC  Raphanus raphanistrum subsp. maritimus
EV529539       <-- TTTCCCCCGTCACGACGCTAAGTCCAAGGTCGAAGCTTTGGTTGAGAAGC  Raphanus raphanistrum subsp. maritimus
EV532120       <-- TTTCCCCCGTCACGACGCTAAGTCCAAGGTCGAAGCTCTGGTTGAGAAGC  Raphanus raphanistrum subsp. maritimus
EX891467       <-- TTTCCCCCGTCACGACGCTAAGTCCAAGGTCGAAGCTCCGGTTGAGAAGC  Raphanus sativus var. oleiformis
EV543522       <-- TTTCCCCCGTCACGACGCTAAGTCCAAGGTCGAAGCTCTGGTTGAGAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961274       <-- TTTCCCCCGTCACGACGCTAAGTCCAAGGTCGAAGCTCTGGTTGAGAAGC  Raphanus raphanistrum subsp. maritimus
EV573867       <-- TTTCCCCCGTCACGACGTTAAGTCCAAGGTCGAAGCTCTGGTTGAGAAGC  Raphanus raphanistrum subsp. landra
EX766445       <-- TTTCCCCCGTCACGACGCTAAGTCCAAGGTCGAAGCTCTGGTTGAGAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768586       <-- TTTCCCCCGTCACGACGTTAAGTCCAAGGTCGAAGCTCTGGTTGAGAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893362       <-- TTTCCCCCGTCACGACGCTAAGTCCAAGGTCGAAGCTCTGGTTGAGAAGC  Raphanus raphanistrum subsp. maritimus
EX767280       <-- TTTCCCC-GTCACGACGCTAAGTCCAAGGTCGAAGCTCTGGTTGAGAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961641       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD546818       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV569291       --> TTTCCCCCGTCACGACGTTAAGTCCAAGGTCGAAGCTCTGGTTGAGAAGC  Raphanus raphanistrum subsp. landra
EV524377       --> TTTCCCCCGTCACGACGCTAAGTCCAAGGTCGAAGCTCTGGTTGAGAAGC  Raphanus raphanistrum subsp. maritimus
EV524932       --> TTTCCCCCGTCACGACGCTAAGTCCAAGGTCGAAGCTCTGGTTGAGAAGC  Raphanus raphanistrum subsp. maritimus
EX762093       --> TTTCCCCCGTCACGACGCTAAGTCCAAGGTCGAAGCTCTGGTTGAGAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX763152       --> TTTCCCCCGTCACGACGCTAAGTCCAAGGTCGAAGCTCTGGTTGAGAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY896928       --> TTTCCCCCGTCACGACGCTAAGTCCAAGGTCGAAGCTCTGGTTGAGAAGC  Raphanus raphanistrum subsp. maritimus
FD550919       --> TTTCCCCCGTCACGACGCTAAGTCCAAGGTCGAAGCTCTGGTTGAGAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX887290       --> TTTCCCCCGTCACGACGCTAAGTCCAAGGTCGAAGCTCCGGTTGAGAAGC  Raphanus sativus var. oleiformis
EV547694       --> TTTCCCCCGTCACGACGCTAAGTCCAAGGTCGAAGCTCTGGTTGAGAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764722       --> TTTCCCCCGTCACGACGTTAAGTCCAAGGTCGAAGCTCTGGTTGAGAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY905193       --> TTTCCCCCGTCACGACGCTAAGTCCAAAGTCGAAGCTCCGGTTGAGAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD532350       --> TTTCCCCCGTCACGACGCTAAGTCCAAGGTCGAAGCTCTGGTTGAGAAGC  Raphanus raphanistrum subsp. maritimus
EV524571       --> TTTCCCCCGTCACGACGCTAAGTCCAAGGTCGAAGCTCTGGTTGAGAAGC  Raphanus raphanistrum subsp. maritimus
FY432022       --> TTTCCCCCGTCACGACGCTAAGTCCAAGGTCGAAGCTCCGGTTGAGAAGC  Raphanus sativus cv GSK3-1
FY443410       --> TTTCCCCCGTCACGACGCTAAGTCCAAGGTCGAAGCTCCGGTTGAGAAGC  Raphanus sativus cv GSK3-1
FY443618       --> TTTCCCCCGTCACGACGCTAAGTCCAAGGTCGAAGCTCCGGTTGAGAAGC  Raphanus sativus cv GSK3-1
FD965573       --> TTTCCCCCGTCACGACGCTAAGTCCAAGGTCGAAGCTCTGGTTGAGAAGC  Raphanus raphanistrum subsp. maritimus
FD966075       --> TTTCCCCCGTCACGACGCTAAGTCCAAGGTCGAAGCTCTGGTTGAGAAGC  Raphanus raphanistrum subsp. maritimus
EW724457       --> TTTCCCCCGTCACGACGCTAAGTCCAAGGTCGAAGCTCCGGTTGAGAAGC  Raphanus sativus cv Early Scarlet Globe
FD946480       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV528022       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               251    -    301
UN22561        --> CGGCTAAGTTTTACCCGGCGGAAGACGTTAAGAAGCCGCTCGCCAACAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529384       <-- CGGCTAAGTTTTACCCGGCGGAAGACGTTAAGAAGCCGCTCGCCAACAGG  Raphanus raphanistrum subsp. maritimus
EV529804       <-- CGGCTAAGTTTTACCCGGCGGAAGACGTTAAGAAGCCGCTCGCCAACAGG  Raphanus raphanistrum subsp. maritimus
EV529539       <-- CGGCTAAGTTTTACCCGGCGGAAGACGTTAAGAAGCCGCTCGCCAACAGG  Raphanus raphanistrum subsp. maritimus
EV532120       <-- CGGCTAAGTTTTACCCGGCGGAAGACGTTAAGAAGCCGCTCGCCAACAGG  Raphanus raphanistrum subsp. maritimus
EX891467       <-- CGGCCAAGTTTTACCCGGCGGAAGACGTTAAGAAGCCGCTCGCCAACAGA  Raphanus sativus var. oleiformis
EV543522       <-- CGGCTAAGTTTTACCCGGCGGAAGACGTTAAGAAGCCGCTCGCCAACAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961274       <-- CGGCTAAGTTTTACCCGGCGGAAGACGTTAAGAAGCCGCTCGCCAACAGG  Raphanus raphanistrum subsp. maritimus
EV573867       <-- CGGCTAAGTTTTACCCGGCGGAAGACGTTAAGAAGCCGCTCGCCAACAGG  Raphanus raphanistrum subsp. landra
EX766445       <-- CGGCTAAGTTTTACCCGGCGGAAGACGTTAAGAAGCCGCTCGCCAACAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768586       <-- CGGCTAAGTTTTACCCGGCGGAAGACGTTAAGAAGCCGCTCGCCAACAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893362       <-- CGGCTAAGTTTTACCCGGCGGAAGACGTTAAGAAGCCGCTCGCCAACAGG  Raphanus raphanistrum subsp. maritimus
EX767280       <-- CGGCTAAGTTTTACCCGGCGGAAGACGTTAAGAAGCCGCTCGCCAACAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961641       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD546818       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV569291       --> CGGCTAAGTTTTACCCGGCGGAAGACGTTAAGAAGCCGCTCGCCAACAGG  Raphanus raphanistrum subsp. landra
EV524377       --> CGGCTAAGTTTTACCCGGCGGAAGACGTTAAGAAGCCGCTCGCCAACAGG  Raphanus raphanistrum subsp. maritimus
EV524932       --> CGGCTAAGTTTTACCCGGCGGAAGACGTTAAGAAGCCGCTCGCCAACAGG  Raphanus raphanistrum subsp. maritimus
EX762093       --> CGGCTAAGTTTTACCCGGCGGAAGACGTTAAGAAGCCGCTCGCCAACAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX763152       --> CGGCTAAGTTTTACCCGGCGGAAGACGTTAAGAAGCCGCTCGCCAACAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY896928       --> CGGCTAAGTTTTACCCGGCGGAAGACGTTAAGAAGCCGCTCGCCAACAGG  Raphanus raphanistrum subsp. maritimus
FD550919       --> CGGCTAAGTTTTACCCGGCGGAAGACGTTAAGAAGCCGCTCGCCAACAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX887290       --> CGGCCAAGTTTTACCCGGCGGAAGACGTTAAGAAGCCGCTCGCCAACAGA  Raphanus sativus var. oleiformis
EV547694       --> CGGCTAAGTTTTACCCGGCGGAAGACGTTAAGAAGCCGCTCGCCAACAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764722       --> CGGCTAAGTTTTACCCGGCGGAAGACGTTAAGAAGCCGCTCGCCAACAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY905193       --> CGGCCAAGTTTTACCCGGCGGAAGACGTTAAGAAGCCTCTCGCCAACAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD532350       --> CGGCTAAGTTTTACCCGGCGGAAGACGTTAAGAAGCCGCTCGCTAACAGG  Raphanus raphanistrum subsp. maritimus
EV524571       --> CGGCTAAGTTTTACCCGGCGGAAGACGTTAAGAAGCCGCTCGCCAACAGG  Raphanus raphanistrum subsp. maritimus
FY432022       --> CGGCCAAGTTCTACCCGGCGGAAGACGTTAAGAAGCCGCTCGCCAACAGG  Raphanus sativus cv GSK3-1
FY443410       --> CGGCCAAGTTCTACCCGGCGGAAGACGTTAAGAAGCCGCTCGCCAACAGG  Raphanus sativus cv GSK3-1
FY443618       --> CGGCCAAGTTCTACCCGGCGGAAGACGTTAAGAAGCCGCTCGCCAACAGG  Raphanus sativus cv GSK3-1
FD965573       --> CGGCTAAGTTTTACCCGGCGGAAGACGTTAAGAAGCCGCTCGCCAACAGG  Raphanus raphanistrum subsp. maritimus
FD966075       --> CGGCTAAGTTTTACCCGGCGGAAGACGTTAAGAAGCCGCTCGCCAACAGG  Raphanus raphanistrum subsp. maritimus
EW724457       --> CGGCCAAGTTTTACTCGGCGGAAGACGTTAAGAAGCCGCTCTCCAACAGA  Raphanus sativus cv Early Scarlet Globe
FD946480       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV528022       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               301    -    351
UN22561        --> CGCAAGCCTAAGCCTACCAAGCTTAAAGCAAGCATTACTCCAGGAACTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529384       <-- CGCAAGCCTAAGCCTACCAAGCTTAAAGCAAGCATTACTCCAGGAACTGT
EV529804       <-- CGCAAGCCTAAGCCTACCAAGCTTAAAGCAAGCATTACTCCAGGAACTGT
EV529539       <-- CGCAAGCCTAAGCCTACCAAGCTTAAAGCAAGCATTACTCCAGGAACTGT
EV532120       <-- CGCAAGCCTAAGCCTACCAAGCTTAAAGCAAGCATTACTCCAGGAACTGT
EX891467       <-- CGCAAGCCTAAGCCTACAAAGCTTAAAGCAAGCATTACTCCAGGAACTGT
EV543522       <-- CGCAAGCCTAAGCCTACCAAGCTTAAAGCAAGCATTACTCCAGGAACTGT
FD961274       <-- CGCAAGCCTAAGCCTACCAAGCTTAAAGCAAGCATTACTCCAGGAACTGT
EV573867       <-- CGCAAGCCTAAGCCTACCAAGCTTAAAGCAAGCATTACTCCAGGAACTGT
EX766445       <-- CGCAAGCCTAAGCCTACCAAGCTTAAAGCAAGCATTACTCCAGGAACTGT
EX768586       <-- CGCAAGCCTAAGCCTACCAAGCTTAAAGCAAGCATTACTCCAGGAACTGT
EY893362       <-- CGCAAGCCTAAGCCTACCAAGCTTAAAGCAAGCATTACTCCAGGAACTGT
EX767280       <-- CGCAAGCCTAAGCCTACCAAGCTTAAAGCAAGCATTACTCCAGGAACTGT
FD961641       <-- ................................CATTACTCCAGGAACTGT
FD546818       <-- ..................................................
EV569291       --> CGCAAGCCTAAGCCTACCAAGCTTAAAGCAAGCATTACTCCAGGAACTGT
EV524377       --> CGCAAGCCTAAGCCTACCAAGCTTAAAGCAAGCATTACTCCAGGAACTGT
EV524932       --> CGCAAGCCTAAGCCTACCAAGCTTAAAGCAAGCATTACTCCAGGAACTGT
EX762093       --> CGCAAGCCTAAGCCTACCAAGCTTAAAGCAAGCATTACTCCAGGAACTGT
EX763152       --> CGCAAGCCTAAGCCTACCAAGCTTAAAGCAAGCATTACTCCAGGAACTGT
EY896928       --> CGCAAGCCTAAGCCTACCAAGCTTAAAGCAAGCATTACTCCAGGAACTGT
FD550919       --> CGCAAGCCTAAGCCTACCAAGCTTAAAGCAAGCATTACTCCAGGAACTGT
EX887290       --> CGCAAGCCTAAGCCTACAAAGCTTAAAGCAAGCATTACTCCAGGAACTGT
EV547694       --> CGCAAGCCTAAGCCTACCAAGCTTAAAGCAAGCATTACTCCAGGAACTGT
EX764722       --> CGCAAGCCTAAGCCTACCAAGCTTAAAGCAAGCATTACTCCAGGAACTGT
EY905193       --> CGCAAGCCTAAGCCCACCAAGCTTAAAGCAAGCATTACTCCAGGAACTGT
FD532350       --> CGCAAGCCTAAGCCTACCAAGCTTAAAGCAAGCATTACTCCAGGAACTGT
EV524571       --> CGCAAGCCTAAGCCTACCAAGCTTAAAGCAAGCATTACTCCAGGAACTGT
FY432022       --> CGCAAGCCTAAGCCTACCAAGCTTAAAGCAAGCATTACTCCAGGAACTGT
FY443410       --> CGCAAGCCTAAGCCTACCAAGCTTAAAGCAAGCATTACTCCAGGAACTGT
FY443618       --> CGCAAGCCTAAGCCTACCAAGCTTAAAGCAAGCATTACTCCAGGAACTGT
FD965573       --> CGCAAGCCTAAGCCTACCAAGCTTAAAGCAAGCATTACTCCAGGAACTGT
FD966075       --> CGCAAGCCTAAGCCTACCAAGCTTAAAGCAAGCATTACTCCAGGAACTGT
EW724457       --> CGCAAGCCTAAGCCTACAAAGCTTAAAGCAAGCATTACTCCAGGAACTGT
FD946480       --> ..................................................
EV528022       --> ..................................................

               351    -    401
UN22561        --> GTTGATCATCCTTGCTGGTAGATTCAAGGGCAAGAGAGTTGTCTTTCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529384       <-- GTTGATCATCCTTGCTGGTAGATTCAAGGGCAAGAGAGTTGTCTTTCTCA
EV529804       <-- GTTGATCATCCTTGCTGGTAGATTCAAGGGCAAGAGAGTTGTCTTTCTCA
EV529539       <-- GTTGATCATCCTTGCTGGTAGATTCAAGGGCAAGAGAGTTGTCTTTCTCA
EV532120       <-- GTTGATCATCCTTGCTGGTAGATTCAAGGGCAAGAGAGTTGTCTTTCTCA
EX891467       <-- GTTGATCATCCTTGCTGGTAGATTCAAGGGCAAGAGAGTTGTCTTTCTCA
EV543522       <-- GTTGATCATCCTTGCTGGTAGATTCAAGGGCAAGAGAGTTGTCTTTCTCA
FD961274       <-- GTTGATCATCCTTGCTGGTAGATTCAAGGGCAAGAGAGTTGTCTTTCTCA
EV573867       <-- GTTGATCATCCTTGCTGGTAGATTCAAGGGCAAGAGAGTTGTCTTTCTCA
EX766445       <-- GTTGATCATCCTTGCTGGTAGATTCAAGGGCAAGAGAGTTGTCTTTCTCA
EX768586       <-- GTTGATCATCCTTGCTGGTAGATTCAAGGGCAAGAGAGTTGTCTTTCTCA
EY893362       <-- GTTGATCATCCTTGCTGGTAGATTCAAGGGCAAGAGAGTTGTCTTTCTCA
EX767280       <-- GTTGATCATCCTTGCTGGTAGATTCAAGGGCAAGAGAGTTGTCTTTCTCA
FD961641       <-- GTTGATCATCCTTGCTGGTAGATTCAAGGGCAAGAGAGTTGTCTTTCTCA
FD546818       <-- ..................................................
EV569291       --> GTTGATCATCCTTGCTGGTAGATTCAAGGGCAAGAGAGTTGTCTTTCTCA
EV524377       --> GTTGATCATCCTTGCTGGTAGATTCAAGGGCAAGAGAGTTGTCTTTCTCA
EV524932       --> GTTGATCATCCTTGCTGGTAGATTCAAGGGCAAGAGAGTTGTCTTTCTCA
EX762093       --> GTTGATCATCCTTGCTGGTAGATTCAAGGGCAAGAGAGTTGTCTTTCTCA
EX763152       --> GTTGATCATCCTTGCTGGTAGATTCAAGGGCAAGAGAGTTGTCTTTCTCA
EY896928       --> GTTGATCATCCTTGCTGGTAGATTCAAGGGCAAGAGAGTTGTCTTTCTCA
FD550919       --> GTTGATCATCCTTGCTGGTAGATTCAAGGGCAAGAGAGTTGTCTTTCTCA
EX887290       --> GTTGATCATCCTTGCTGGTAGATTCAAGGGCAAGAGAGTTGTCTTTCTCA
EV547694       --> GTTGATCATCCTTGCTGGTAGATTCAAGGGCAAGAGAGTTGTCTTTCTCA
EX764722       --> GTTGATCATCCTTGCTGGTAGATTCAAGGGCAAGAGAGTTGTCTTTCTCA
EY905193       --> GTTGATCATCCTTGCTGGTAGATTCAAGGGCAAGAGAGTTGTCTTTCTCA
FD532350       --> GTTGATCATCCTTGCTGGTAGATTCAAGGGCAAGAGAGTTGTCTTTCTCA
EV524571       --> GTTGATCATCCTTGCTGGTAGATTCAAGGGCAAGAGAGTTGTCTTTCTCA
FY432022       --> GTTGATCATCCTTGCTGGTAGATTCAAGGGCAAGAGAGTTGTCTTTCTCA
FY443410       --> GTTGATCATCCTTGCTGGTAGATTCAAGGGCAAGAGAGTTGTCTTTCTCA
FY443618       --> GTTGATCATCCTTGCTGGTAGATTCAAGGGCAAGAGAGTTGTCTTTCTCA
FD965573       --> GTTGATCATCCTTGCTGGTAGATTCAAGGGCAAGAGAGTTGTCTTTCTCA
FD966075       --> GTTGATCATCCTTGCTGGTAGATTCAAGGGCAAGAGAGTTGTCTTTCTCA
EW724457       --> GTTGATCATCCTTGCTGGTAGATTCAAGGGCAAGAGAGTTGTCTTTCTCA
FD946480       --> ..................................................
EV528022       --> ..................................................

               401    -    451
UN22561        --> AGCAACTCACTTCTGGTTTGCTTTTGGTTACTGGACCATTCAAGATCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529384       <-- AGCAACTCACTTCTGGTTTGCTTTTGGTTACTGGACCATTCAAGATCAAC
EV529804       <-- AGCAACTCACTTCTGGTTTGCTTTTGGTTACTGGACCATTCAAGATCAAC
EV529539       <-- AGCAACTCACTTTTGGTTTGCTTTTGGTTACTGGACCATTCAAGATCAAC
EV532120       <-- AGCAACTCACTTCTGGTTTGCTTTTGGTTACTGGACCATTCAAGATCAAC
EX891467       <-- AGCAACTCACTTCTGGTTTGCTTTTGGTTACTGGACCATTCAAGATCAAC
EV543522       <-- AGCAACTCACTTCTGGTTTGCTTTTGGTTACTGGACCATTCAAGATCAAC
FD961274       <-- AGCAACTCACTTCTGGTTTGCTTTTGGTTACTGGACCATTCAAGATCAAC
EV573867       <-- AGCAACTCACTTCTGGTTTGCTTTTGGTTACTGGACCATTCAAGATCAAC
EX766445       <-- AGCAACTCACTTCTGGTTTGCTTTTGGTTACTGGACCATTCGAGATCAAC
EX768586       <-- AGCAACTCACTTCTGGTTTGCTTTTGGTTACTGGACCATTCAAGATCAAC
EY893362       <-- AGCAACTCACTTCTGGTTTGCTTTTGGTTACTGGACCATTCAAGATCAAC
EX767280       <-- AGCAACTCACTTCTGGTTTGCTTTTGGTTACTGGACCATTCAAGATCAAC
FD961641       <-- AGCAACTCACTTCTGGTTTGCTTTTGGTTACTGGACCATTCAAGATCAAC
FD546818       <-- ..................................................
EV569291       --> AGCAACTCACTTCTGGTTTGCTTTTGGTTACTGGACCATTCAAGATCAAC
EV524377       --> AGCAACTCACTTCTGGTTTGCTTTTGGTTACTGGACCATTCAAGATCAAC
EV524932       --> AGCAACTCACTTCTGGTTTGCTTTTGGTTACTGGACCATTCAAGATCAAC
EX762093       --> AGCAACTCACTTCTGGTTTGCTTTTGGTTACTGGACCATTCGAGATCAAC
EX763152       --> AGCAACTCACTTCTGGTTTGCTTTTGGTTACTGGACCATTCAAGATCAAC
EY896928       --> AGCAACTCACTTCTGGTTTGCTTTTGGTTACTGGACCATTCAAGATCAAC
FD550919       --> AGCAACTCACTTCTGGTTTGCTTTTGGTTACTGGACCATTCAAGATCAAC
EX887290       --> AGCAACTCACTTCTGGTTTGCTTTTGGTTACTGGACCATTCAAGATCAAC
EV547694       --> AGCAACTCACTTCTGGTTTGCTTTTGGTTACTGGACCATTCAAGATCAAC
EX764722       --> AGCAACTCACTTCTGGTTTGCTTTTGGTTACTGGACCATTCAAGATCAAC
EY905193       --> AGCAACTCACTTCTGGTTTGCTTTTGGTTACTGGACCATTCAAGATCAAC
FD532350       --> AGCAACTCACTTCTGGTTTGCTTTTGGTTACTGGACCATTCAAGATCAAC
EV524571       --> AGCAACTCACTTCTGGTTTGCTTTTGGTTACTGGACCATTCAAGATCAAC
FY432022       --> AGCAACTCACTTCTGGTTTGCTTTTGATAACTGGACCATTCAAGATCAAC
FY443410       --> AGCAACTCACTTCTGGTTTGCTTTTGATAACTGGACCATTCAAGATCAAC
FY443618       --> AGCAACTCACTTCTGGTTTGCTTTTGATAACTGGACCATTCAAGATCAAC
FD965573       --> AGCAACTCACTTCTGGTTTGCTTTTGGTTACTGGACCATTCAAGATCAAC
FD966075       --> AGCAACTCACTTCTGGTTTGCTTTTGGTTACTGGACCATTCAAGATCAAC
EW724457       --> AGCAACTCACTTCTGGTTTGCTTTTGGTTACTGGACCATTCAAGATCAAC
FD946480       --> ..................................................
EV528022       --> ..................................................

               451    -    501
UN22561        --> GGTGTTCCGTTGAGACGTGTTAACCAGTCCTACGTGATTGGAACCTCCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529384       <-- GGTGTTCCGTTGAGACGTGTTAACCAGTCCTACGTGATTGGAACCTCCAC  Raphanus raphanistrum subsp. maritimus
EV529804       <-- GGTGTTCCGTTGAGACGTGTTAACCAGTCCTACGTGATTGGAACCTCCAC  Raphanus raphanistrum subsp. maritimus
EV529539       <-- GGTGTTCCGTTGAGACGTGTTAACCAGTCCTACGTGATTGGAACCTCCAC  Raphanus raphanistrum subsp. maritimus
EV532120       <-- GGTGTTCCGTTGAGACGTGTTAACCAGTCCTACGTGATTGGAACCTCCAC  Raphanus raphanistrum subsp. maritimus
EX891467       <-- GGTGTTCCGTTGAGACGTGTTAACCAGTCGTACGTGATTGGAACCTCCAC  Raphanus sativus var. oleiformis
EV543522       <-- GGTGTTCCGTTGAGACGTGTTAACCAGTCCTACGTGATTGGAACCTCCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961274       <-- GGTGTTCCGTTGAGACGTGTTAACCAGTCCTACGTGATTGGAACCTCCAC  Raphanus raphanistrum subsp. maritimus
EV573867       <-- GGTGTTCCGTTGAGACGTGTTAACCAGTCGTACGTGATTGGGACCTCCAC  Raphanus raphanistrum subsp. landra
EX766445       <-- GGTGTTCCGTTGAGACGTGTTAACTAGTCCTACGTGATTGGAACCTCCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768586       <-- GGTGTTCCGTTGAGACGTGTTAACCAGTCCTACGTGATTGGAACCTCCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893362       <-- GGTGTTCCGTTGAGACGTGTTAACCAGTCCTACGTGATTGGAACCTCCAC  Raphanus raphanistrum subsp. maritimus
EX767280       <-- GGTGTTCCGTTGAGACGTGTTAACCAGTCCTACGTGATTGGAACCTCCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961641       <-- GGTGTTCCGTTGAGACGTGTTAACCAGTCCTACGTGATTGGAACCTCCAC  Raphanus raphanistrum subsp. maritimus
FD546818       <-- .............GACGTGTTAACCAGTCCTACGTGATTGGAACCTCCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV569291       --> GGTGTTCCGTTGAGACGTGTTAACCAGTCGTACGTGATTGGGACCTCCAC  Raphanus raphanistrum subsp. landra
EV524377       --> GGTGTTCCGTTGAGACGTGTTAACCAGTCCTACGTGATTGGAACCTCCAC  Raphanus raphanistrum subsp. maritimus
EV524932       --> GGTGTTCCGTTGAGACGTGTTAACCAGTCCTACGTGATTGGAACCTCCAC  Raphanus raphanistrum subsp. maritimus
EX762093       --> GGTGTTCCGTTGAGACGTGTTAACTAGTCCTACGTGATTGGAACCTCCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX763152       --> GGTGTTCCGTTGAGACGTGTTAACCAGTCCTACGTGATTGGAACCTCCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY896928       --> GGTGTTCCGTTGAGACGTGTTAACCAGTCCTACGTGATTGGAACCTCCAC  Raphanus raphanistrum subsp. maritimus
FD550919       --> GGTGTTCCGTTGAGACGTGTTAACCAGTCCTACGTGATTGGAACCTCCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX887290       --> GGTGTTCCGTTGAGACGTGTTAACCAGTCGTACGTGATTGGAACCTCCAC  Raphanus sativus var. oleiformis
EV547694       --> GGTGTTCCGTTGAGACGTGTTAACCAGTCCTACGTGATTGGAACCTCCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764722       --> GGTGTTCCGTTGAGACGTGTTAACCAGTCCTACGTGATTGGAACCTCCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY905193       --> GGTGTTCCGTTGAGACGTGTTAACCAGTCGTACGTGATTGGAACCTCCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD532350       --> GGTGTTCCGTTGAGACGTGTTAACCAGTCCTACGTGATTGGAACCTCCAC  Raphanus raphanistrum subsp. maritimus
EV524571       --> GGTGTTCCGTTGAGACGTGTTAACCAGTCCTACGTGATTGGAACCTCCAC  Raphanus raphanistrum subsp. maritimus
FY432022       --> GGTGTTCCGTTGAGACGTGTTAACCAGTCGTACGTGATTGGAACCTCCAC  Raphanus sativus cv GSK3-1
FY443410       --> GGTGTTCCGTTGAGACGTGTTAACCAGTCGTACGTGATTGGAACCTCCAC  Raphanus sativus cv GSK3-1
FY443618       --> GGTGTTCCGTTGAGACGTGTTAACCAGTCGTACGTGATTGGAACCTCCAC  Raphanus sativus cv GSK3-1
FD965573       --> GGTGTTCCGTTGAGACGTGTTAACCAGTCCTACGTGATTGGAACCTCCAC  Raphanus raphanistrum subsp. maritimus
FD966075       --> GGTGTTCCGTTGAGACGTGTTAACCAGTCCTACGTGATTGGAACCTCCAC  Raphanus raphanistrum subsp. maritimus
EW724457       --> GGTGTTCCGTTGAGACGTGTTAACCAGTCGTACGTGATTGGAACCTCCAC  Raphanus sativus cv Early Scarlet Globe
FD946480       --> .............................gTACGTGATTGGAACCTCCAC  Raphanus sativus cv Early Scarlet Globe
EV528022       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               501    -    551
UN22561        --> GAAGGTTGACATTTCTGGAGTCAACACTGAGAAATTCGATGACAAGTACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529384       <-- GAAGGTTGACATTTCTGGAGTCAACACTGAGAAATTCGATGACAAGTACT  Raphanus raphanistrum subsp. maritimus
EV529804       <-- GAAGGTTGACATTTCTGGAGTCAACACTGAGAAATTCGATGACAAGTACT  Raphanus raphanistrum subsp. maritimus
EV529539       <-- GAAGGTTGACATTTCTGGAGTCAACACTGAGAAATTCGATGACAAGTACT  Raphanus raphanistrum subsp. maritimus
EV532120       <-- GAAGGTTGACATT-CTGGAGTCAACACTGAGAAATTCGATGACAAGTACT  Raphanus raphanistrum subsp. maritimus
EX891467       <-- GAAGGTTGACATTTCTGGAGTTAACACTGAGAAATTCGATGACAAGTACT  Raphanus sativus var. oleiformis
EV543522       <-- GAAGGTTGACATTTCTGGAGTCAACACTGAGAAATTCGATGACAAGTACT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961274       <-- GAAGGTTGACATTTCTGGAGTCAACACTGAGAAATTCGATGACAAGTACT  Raphanus raphanistrum subsp. maritimus
EV573867       <-- GAAGGTTGACATTTCTGGAGTTAACACTGAGAAATTCGATGACAAGTACT  Raphanus raphanistrum subsp. landra
EX766445       <-- GAAGGTTGACATTTCTGGAGTCAACACTGAGAAATTCGATGACAAGTACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768586       <-- GAAGGTTGACATTTCTGGAGTCAACACTGAGAAATTCGATGATAAGTACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893362       <-- GAAGGTTGACATTTCTGGAGTCAACACTGAGAAATTCGATGACAAGTACT  Raphanus raphanistrum subsp. maritimus
EX767280       <-- GAAGGTTGACATTTCTGGAGTCAACACTGAGAAATTCGATGACAAGTACT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961641       <-- GAAGGTTGACATTTCTGGAGTCAACACTGAGAAATTCGATGACAAGTACT  Raphanus raphanistrum subsp. maritimus
FD546818       <-- GAAGGTTGACATTTCTGGAGTCAACACTGAGAAATTCGATGACAAGTACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV569291       --> GAAGGTTGACATTTCTGGAGTTAACACTGAGAAATTCGATGACAAGTACT  Raphanus raphanistrum subsp. landra
EV524377       --> GAAGGTTGACATTTCTGGAGTCAACACTGAGAAATTCGATGACAAGTACT  Raphanus raphanistrum subsp. maritimus
EV524932       --> GAAGGTTGACATTTCTGGAGTCAACACTGAGAAATTCGATGACAAGTACT  Raphanus raphanistrum subsp. maritimus
EX762093       --> GAAGGTTGACATTTCTGGAGTCAACACTGAGAAATTCGATGACAAGTACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX763152       --> GAAGGTTGACATTTCTGGAGTCAACACTGAGAAATTCGATGACAAGTACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY896928       --> GAAGGTTGACATTTCTGGAGTCAACACTGAGAAATTCGATGACAAGTACT  Raphanus raphanistrum subsp. maritimus
FD550919       --> GAAGGTTGACATTTCTGGAGTCAACACTGAGAAATTCGATGACAAGTACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX887290       --> GAAGGTTGACATTTCTGGAGTTAACACTGAGAAATTCGATGACAAGTACT  Raphanus sativus var. oleiformis
EV547694       --> GAAGGTTGACATTTCTGGAGTCAACACTGAGAAATTCGATGACAAGTACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764722       --> GAAGGTTGACATTTCTGGAGTCAACACTGAGAAATTCGATGATAAGTACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY905193       --> GAAGGTTGACATTTCTGGAGTCAACACTGAGAAATTCGATGACAAGTACT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD532350       --> GAAGGTTGACATTTCTGGAGTCAACACTGAGAAATTCGATGACAAGTACT  Raphanus raphanistrum subsp. maritimus
EV524571       --> GAAGGTTGACATTTCTGGAGTCAACACTGAGAAATTCGATGACAAGTACT  Raphanus raphanistrum subsp. maritimus
FY432022       --> GAAGGTTGACATTTCTGGAGTCAACACTGAGAAATTCGATGACAAGTACT  Raphanus sativus cv GSK3-1
FY443410       --> GAAGGTTGACATTTCTGGAGTCAACACTGAGAAATTCGATGACAAGTACT  Raphanus sativus cv GSK3-1
FY443618       --> GAAGGTTGACATTTCTGGAGTCAACACTGAGAAATTCGATGACAAGTACT  Raphanus sativus cv GSK3-1
FD965573       --> GAAGGTTGACATTTCTGGAGTCAACACTGAGAAATTCGATGACAAGTACT  Raphanus raphanistrum subsp. maritimus
FD966075       --> GAAGGTTGACATTTCTGGAGTCAACACTGAGAAATTCGATGACAAGTACT  Raphanus raphanistrum subsp. maritimus
EW724457       --> GAAGGTTGACATTTCTGGAGTTAACACTGAGAAATTCGATGACAAGTACT  Raphanus sativus cv Early Scarlet Globe
FD946480       --> GAAGGTTGACATTTCTGGAGTTAACACTGAGAAATTCGATGACAAGTACT  Raphanus sativus cv Early Scarlet Globe
EV528022       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               551    -    601
UN22561        --> TCGGAAAGGTTGCTGAGAAGAAGACGAAGAAAGGAGAAGGCGAATTCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529384       <-- TCGGAAAGGTTGCTGAGAAGAAGACGAAGAAAGGAGAAGGCGAATTCTTT  Raphanus raphanistrum subsp. maritimus
EV529804       <-- TCGGAAAGGTTGCTGAGAAGAAGACGAAGAAAGGAGAAGGCGAATTCTTT  Raphanus raphanistrum subsp. maritimus
EV529539       <-- TCGGAAAGGTTACTGAGAAGAAGACGAAGAAAGGAGAAGGCGAATTCTTT  Raphanus raphanistrum subsp. maritimus
EV532120       <-- TCGGAAAGGTTGCTGAGAAGAAGACGAAGAAAGGAGAAGGCGAATTCTTT  Raphanus raphanistrum subsp. maritimus
EX891467       <-- TCGGAAAGGTTGCTGAGAAGAAGACGAAGAAAGGAGAAGGCGAGTTCTTT  Raphanus sativus var. oleiformis
EV543522       <-- TCGGAAAGGTTGCTGAGAAGAAGACGAAGAAAGGAGAAGGCGAATTCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961274       <-- TCGGAAAGGTTGCTGAGAAGAAGACGAAGAAAGGAGAAGGCGAATTCTTT  Raphanus raphanistrum subsp. maritimus
EV573867       <-- TCGGAAAGGTTGCTGAGAAGAAGACGAAGAAAGGAGAAGGCGCGTTCTTT  Raphanus raphanistrum subsp. landra
EX766445       <-- TCGGAAAGGTTGCTGAGAAGAAGACGAAGAAAGGAGAAGGCGAATTCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768586       <-- TCGGAAAGGTTGCTGAGAAGAAGACGAAGAAAGTAGAAGGCGAATTCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893362       <-- TCGGAAAGGTTGCTGAGAAGAAGACGAAGAAAGGAGAAGGCGAATTCTTT  Raphanus raphanistrum subsp. maritimus
EX767280       <-- TCGGAAAGGTTGCTGAGAAGAAGACGAAGAAAGGAGAAGGCGAATTCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961641       <-- TCGGAAAGGTTGCTGAGAAGAAGACGAAGAAAGGAGAAGGCGAATTCTTT  Raphanus raphanistrum subsp. maritimus
FD546818       <-- TCGGAAAGGTTGCTGAGAAGAAGACGAAGAAAGGAGAAGGCGAATTCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV569291       --> TCGGAAAGGTTGCTGAGAAGAAGACGAAGAAAGGAGAAGGCGCGTTCTTT  Raphanus raphanistrum subsp. landra
EV524377       --> TCGGAAAGGTTGCTGAGAAGAAGACGAAGAAAGGAGAAGGCGAATTCTTT  Raphanus raphanistrum subsp. maritimus
EV524932       --> TCGGAAAGGTTGCTGAGAAGAAGACGAAGAAAGGAGAAGGCGAATTCTTT  Raphanus raphanistrum subsp. maritimus
EX762093       --> TCGGAAAGGTTGCTGAGAAGAAGACGAAGAAAGGAGAAGGCGAATTCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX763152       --> TCGGAAAGGTTGCTGAGAAGAAGACGAAGAAAGGAGAAGGCGAATTCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY896928       --> TCGGAAAGGTTGCTGAGAAGAAGACGAAGAAAGGAGAAGGCGAATTCTTT  Raphanus raphanistrum subsp. maritimus
FD550919       --> TCGGAAAGGTTGCTGAGAAGAAGACGAAGAAAGGAGA.............  Raphanus raphanistrum subsp. raphanistrum (NY)
EX887290       --> TCGGAAAGGTTGCTGAGAAGAAGACGAAGAAAGGAGAAGGCGAGTTCTTT  Raphanus sativus var. oleiformis
EV547694       --> TCGGAAAGGTTGCTGAGAAGAAGACGAAGAAAGGAGAAGGCGAATTCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764722       --> TCGGAAAGGTTGCTGAGAAGAAGACGAAGAAAGTAGAAAGCGAATTCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY905193       --> TCAGAAAGGTTGCTGAGAAGAAGACGAAGAAAGGAGAGGGAGAGTTCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD532350       --> TCGGAAAGGTTGCTGAGAAGAAGACGAAGAAAGGAGAAGGCGAATTCTTT  Raphanus raphanistrum subsp. maritimus
EV524571       --> TCGGAAAGGTTACTGAGAAGAAGACGAAGAAAGGAGAAGGCGAATTCTTT  Raphanus raphanistrum subsp. maritimus
FY432022       --> TCGGAAAGGTTGCTGAGAAGAAGACGAAGAAAGGAGAAGGCGAGTTCTTT  Raphanus sativus cv GSK3-1
FY443410       --> TCGGAAAGGTTGCTGAGAAGAAGACGAAGAAAGGAGAAGGCGAGTTCTTT  Raphanus sativus cv GSK3-1
FY443618       --> TCGGAAAGGTTGCTGAGAAGAAGACGAAGAAAGGAGAAGGCGAGTTCTTT  Raphanus sativus cv GSK3-1
FD965573       --> TCGGAAAGGTTGCTGAGAAGAAGACGAAGAAAGGAGAAGGCGAATTCTTT  Raphanus raphanistrum subsp. maritimus
FD966075       --> TCGGAAAGGTTGCTGAGAAGAAGACGAAGAAAGGAGAAGGCGAATTCTTT  Raphanus raphanistrum subsp. maritimus
EW724457       --> TCGGAAAGGTTGCTGAGAAGAAGACGAAGAAAGGAGAAGGCGAGTTCTTT  Raphanus sativus cv Early Scarlet Globe
FD946480       --> TCGGAAAGGTTGCTGAGAAGAAGACGAAGAAAGGAGAAGGCGAGTTCTTT  Raphanus sativus cv Early Scarlet Globe
EV528022       --> ............CTGAGAAGAAGACGAAGAAAGGAGAAGGCGAATTCTTT  Raphanus raphanistrum subsp. maritimus

               601    -    651
UN22561        --> -GAAGCTGACAAAGAGGAGAAGAAAGAGATCCCTCAAGAGAAGAAGGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529384       <-- -GAAGCTGACAAAGAGGAGAAGAAAGAGTTCCCTCAAGAGAAGAAGGAAG  Raphanus raphanistrum subsp. maritimus
EV529804       <-- -GAAGCTGACAAAGAGGAGAAGAAAGAGATCCCTCAAGAGAAGAAGGAAG  Raphanus raphanistrum subsp. maritimus
EV529539       <-- -GAAGCTGACAAAGAGG-GAAGAAAGAGATCCCTCAAGAGAAGAAGGAAG  Raphanus raphanistrum subsp. maritimus
EV532120       <-- -GAAGCTGACAAAGAGGAGAAGAAAGAGATCCCTCAAGAGAAGAAGGAAG  Raphanus raphanistrum subsp. maritimus
EX891467       <-- -GAAGCTGACAAACAGGAGAAGAAAGAGATCCCTCAAGAGAAGAAGGAAG  Raphanus sativus var. oleiformis
EV543522       <-- -GAAGCTGACAAAGAGGAGAAGAAAGAGATCCCTCAAGAGAAGAAGGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961274       <-- -GAAGCTGACAAAGAGGAGAAGAAAGAGATCCCTCAAGAGAAGAAGGAAG  Raphanus raphanistrum subsp. maritimus
EV573867       <-- -GAAGCTGACAAAGAGGTGAAGAAAGAGATCCCACAAGAGAAGAAGGAAG  Raphanus raphanistrum subsp. landra
EX766445       <-- -GAAGCTGACAAAGAGGAGAAGAAAGAGATCCCTCAAGAGAAGAAGGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768586       <-- -GAAGCTGACAAAGAGGAGAAGAAAGAGATCCCTCAAGAGAAGAAGGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893362       <-- -GAAGCTGACAAAGAGGAGAAGAAAGAGATCCCTCAAGAGAAGAAGGAAG  Raphanus raphanistrum subsp. maritimus
EX767280       <-- -GAAGCTGACAAAGAGGAGAAGAAAGAGATCCCTCAAGAGAAGAAGGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961641       <-- -GAAGCTGACAAAGAGGAGAAGAAAGAGATCCCTCAAGAGAAGAAGGAAG  Raphanus raphanistrum subsp. maritimus
FD546818       <-- -GAAGCTGACAAAGAGGAGAAGAAAGAGATCCCTCAAGAGAAGAAGGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV569291       --> -GAAGCTGACAAAGAGGTGAAGAAAGAGATCCCACAAGAGAAGAAGGAAG  Raphanus raphanistrum subsp. landra
EV524377       --> -GAAGCTGACAAAGAGGAGAAGAAAGAGATCCCTCAAGAGAAGAAGGAAG  Raphanus raphanistrum subsp. maritimus
EV524932       --> -GAAGCTGACAAAGAGGAGAAGAAAGAGATCCCTCAAGAGAAGAAGGAAG  Raphanus raphanistrum subsp. maritimus
EX762093       --> -GAAGCTGACAAAGAGGAGAAGAAAGAGATCCCTCAAGAGAAGAAGGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX763152       --> -GAAGCTGACAAAGAGGAGAAGAAAGAGATCTCTCAAGAGAAGAAGGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY896928       --> -GAAGCTGACAAAGAGGAGAAGAAAGAGATCCCTCAAGAGAAGAAGGAAG  Raphanus raphanistrum subsp. maritimus
FD550919       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX887290       --> -GAAGCTGACAAACAGGAGAAGAAAGAGATCCCTCAAGAGAAGAAG-AAG  Raphanus sativus var. oleiformis
EV547694       --> -GAAGCTGACAAAGAGGAGAAGAAAGAGATCCCTCAAGAGAAGAAGGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764722       --> -GAAGCTGACAAAGAGGAGAAGAAAGAGATCCCTCAgag...........  Raphanus raphanistrum subsp. raphanistrum (NY)
EY905193       --> -GAAGCTGACAAAGAGGTGAAGAAAGAGATCCCTCAAGAGAAGAAGGAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD532350       --> -GAAGCTGACAAAGAGGAGAAGAAAGAGATCCCTCAAGAGAAGAAGGAAG  Raphanus raphanistrum subsp. maritimus
EV524571       --> -GAAGCTGACAAAGAGG-GAAGAAAGAGATCCCTCAAGAGAAGAAGGAAG  Raphanus raphanistrum subsp. maritimus
FY432022       --> -GAAGCTGACAAAGAGGTGAAGAAAGAGATCCCTCAAGAGAAGAAGGAAG  Raphanus sativus cv GSK3-1
FY443410       --> -GAAGCTGACAAAGAGGTGAAGAAAGAGATCCCTCAAGAGAAGAAGGAAG  Raphanus sativus cv GSK3-1
FY443618       --> -GAAGCTGACAAAGAGGTGAAGAAAGAGATCCCTCAAGAGAAGAAGGAAG  Raphanus sativus cv GSK3-1
FD965573       --> -GAAGCTGACAAAGAGGAGAAGAAAGAGATCCCTCAAGAGA.........  Raphanus raphanistrum subsp. maritimus
FD966075       --> -GAAGCTGACAAAGAGGAGAAGAAAGAGATCCCTCAAGAGAAGAAGGAAG  Raphanus raphanistrum subsp. maritimus
EW724457       --> -GAAGCTGACAAACAGGAGAAGAAAGAGATCCCTCAAGAGAAGAAGGAAG  Raphanus sativus cv Early Scarlet Globe
FD946480       --> -GAAGCTGACAAACAGGAGAAGAAAGAGATCCCTCAAGAGAAGAAGGAAG  Raphanus sativus cv Early Scarlet Globe
EV528022       --> TGAAGCTGACAAAGAGGAGAAGAAAGAGATCCCTCAAGAGAAGAAGGAAG  Raphanus raphanistrum subsp. maritimus

               651    -    701
UN22561        --> ACCAGAAAACCGTAGACGCAGCTCTGATCAAATCCATTGAAGCAGTCCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529384       <-- ACCAGAAAACCGTAGACGCAGCT...........................
EV529804       <-- ACCAGAAAACCGTAGACGCAGCTCTGATCAAATCCATTGAAGCAGTCCCA
EV529539       <-- ACCAGAAAACCGTAGACGCAGCTCTGATCAAATCCATTGAAGCAGTCCCA
EV532120       <-- ACCAGAAAACCGTAGACGCAGCTCTGATCAAATCCATTGAAGCAGTCCCA
EX891467       <-- ACCAGAAAACCGTAGACGCAGCTCTGATCAAATCCATTGAAGCAGTCCCA
EV543522       <-- ACCAGAAAACCGTAGACGCAGCTCTGATCAAATCCATTGAAGCAGTCCCA
FD961274       <-- ACCAGAAAACCGTAGACGCAGCTCTGATCAAATCCATTGAAGTAGTCCCA
EV573867       <-- ACCAGAAAACCGTAGACGCAGCTCTGATCAAATCCATTGAAGCAGTCCCA
EX766445       <-- ACCAGAAAACCGTAGACGCAGCTCTGATCAAATCCATTGAAGCAGTCCCA
EX768586       <-- ACCAGAAAACCGTAGACGCAGCTCTGATCAAATCCATTGAAGCAGTCCCA
EY893362       <-- ACCAGAAAACCGTAGACGCAGCTCTGATCAAATCCATTGAAGCAGTCCCA
EX767280       <-- ACCAGAAAACCGTAGACGCAGCTCTGATCAAATCCATTGAAGCAGTCCCA
FD961641       <-- ACCAGAAAACCGTAGACGCAGCTCTGATCAAATCCATTGAAGTAGTCCCA
FD546818       <-- ACCAGAAAACCGTAGACGCAGCTCTGATCAAATCCATTGAAGCGGTCCCA
EV569291       --> ACCAGAAAACCGTAGACGCAGCTCTGATCAAATCCATTGAAGCAGTCCCA
EV524377       --> ACCAGAAAACCGTAGACGCAGCTCTGATCAAATCCATTGAAGCAGTCCCA
EV524932       --> ACCAGAAAACCGTAGACGCAGCTCTGATCAAATCCATTGAAGCAGTCCCA
EX762093       --> ACCAGAAAACCGTAGACGCAGCTCTGATCAAATCCATTGAAGCAGTCCCA
EX763152       --> ACCAGAAAACCGTAGACGCAGCTCTGATCAAATCCATTGAAGCAGTCCCA
EY896928       --> ACCAGAAAACCGTAGACGCAGCTCTGATCAAATCCATTGAAGCAGTCCCA
FD550919       --> ..................................................
EX887290       --> ACCAGAAAACCGTAGACGCAGCTCTGATCAAATCCATTGAAGCAGTCCCA
EV547694       --> ACCAGAAAACCGTAGACGCAGCTCTGATCAAATCCATTGAAGCAGTCCCA
EX764722       --> ..................................................
EY905193       --> ACCAGAAAACCGTAGACGCAGCTCTTATCAAATCCATTGAAGCAGTCCCA
FD532350       --> ACCAGAAAACCGTAGACGCAGCTCTGATCAAATCCATTGAAGCAGTCCCA
EV524571       --> ACCAGAAAACCGTAGACGCAGCTCTGATCAAATCCATTGAAGCAGTCCCA
FY432022       --> ACCAGAAAACCGTAGACGCAGCTCTGATCAAATCCATTGAAGCAGTCCCA
FY443410       --> ACCGGAAAACCGTAGACGCAGCTCTGATCAAATCCATTGAAGCAGTCCCA
FY443618       --> ACCGGAAAACCGTAGACGCAGCTCTGATCAAATCCATTGAAGCAGTCCCA
FD965573       --> ..................................................
FD966075       --> ACCAGAAAACCGTAGACGCAGCTCTGATCAAATCCATTGAAGTAGTCCCA
EW724457       --> ACCAGAAAACCGTAGACGCAGCTCTGATCAAATCCATTGAAGCAGTCCCA
FD946480       --> ACCAGAAAACCGTAGACGCAGCTCTGATCAAATCCATTGAAGCAGTCCCA
EV528022       --> ACCAGAAAACCGTAGACGCAGCTCTGATCAAATCCATTGAAGCAGTCCCA

               701    -    751
UN22561        --> GAGCTCAAGACTTACCTCGGCGCCAGGTTCTCTCTGTCACAAGGAATGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529384       <-- ..................................................
EV529804       <-- GAGCTCAAGACTTACCTCGGCGCCAGGTTCTCTCTGTCACAAGGAATGAA
EV529539       <-- GAGCTCAAGACTTACCTCGGCGCCAGGTTCTTTCTGTCACAAGGAATGAA
EV532120       <-- GAGCTCAAGACTTACCTCGGCGCCAGGTTCTCTCTGTCACAAGGAATGAA
EX891467       <-- GAGCTCAAGACTTACCTCGGCGCCAGGTTCTCTCTGTCACAAGGAATGAA
EV543522       <-- GAGCTCAAGACTTACCTCGGCGCCAGGTTCTCTCTGTCACAAGGAATGAA
FD961274       <-- GAGCTCAAGACTTACCTCGGCGCCAGGTTCTCTCTGTCACAAGGAATGAA
EV573867       <-- GAGCTCAAGACTTACCTCGGCGCCAGGTTCTCTCTGTCACAAGGAATGAA
EX766445       <-- GAGCTCAAGACTTACCTCGGCGCCAGGTTCTCTCTGTCACAAGGAATGAA
EX768586       <-- GAGCTCAAGACTTACCTCGGCGCCAGGTTCTCTCTGTCACAAGGAATGAA
EY893362       <-- GAGCTCAAGACTTACCTCGGCGCCAGGTTCTCTCTGTCACAAGGAATGAA
EX767280       <-- GAGCTCAAGACTTACCTCGGCGCCAGGTTCTCTCTGTCACAAGGAATGAA
FD961641       <-- GAGCTCAAGACTTACCTCGGCGCCAGGTTCTTTCTGTCACAAGGAATGAA
FD546818       <-- GAGCTCAAGACTTACCTCGGCGCCAGGTTCTCTCTGTCACAAGGAATGAA
EV569291       --> GAGCTCAAGACTTACCTCGGCGCCAGGTTCTCTCTGTCACAAG-AATGAA
EV524377       --> GAGCTCTAGACTTACCTCGGCG--AGGTTCTCTCTGTCACAAG-AATGAA
EV524932       --> GAGCTCAAGACTTACCTCGGCGCCAGGTTCTCTCTGTCACAAG-AATGAA
EX762093       --> GAGCTCA-GACTTACCTCGGCGCCAGGTTCTCTCTGTCACAAGGA-TGAA
EX763152       --> GAGCTCAAGACTTACCTCGGCGCCAGGTTCTCTCTGTCACAAGGA-TG-A
EY896928       --> GAGCTCAAGACTTACCTCGGCGCCAGGTTCTCTCTGTCACAAGGA-TGAA
FD550919       --> ..................................................
EX887290       --> GAGCTCAAGACTTACCTCGGCGCCAGGTTCTCTCTGTCA...........
EV547694       --> GAGCTCAAGACTTACCTCGGCGCCAGGTTCTCTCTGTCACAAGGAATGAA
EX764722       --> ..................................................
EY905193       --> GAGCTCAAGACTTACCTCGGCGCCAGGTTCTCTCTGTCA...........
FD532350       --> GAGCTCAAGACTTACCTCGGCGCCAGGTTCTCTCTGTCACAAGGA-TG-A
EV524571       --> GAGCTCAAGACTTACCTCGGCGCCAGGTTCTCTCTGTCACAAG-AATGAA
FY432022       --> GAGCTCAAGACTTACCTCGGCGCCAGGTTCTCTCTGTCACAAGGAATGAA
FY443410       --> GAGCTCAAGACTTACCTCGGCGCCAGGTTCTCTCTGTCACAAGGAATGAA
FY443618       --> GAGCTCAAGACTTACCTCGGCGCCAGGTTCTCTCTGTCACAAGGAATGAA
FD965573       --> ..................................................
FD966075       --> GAGCTCAAGACTTACCTCGGCGCC..........................
EW724457       --> GAGCTCAAGACTTACCTCGGCGCCAGGTTCTCTCTGTCACAAGGAATGAA
FD946480       --> GAGCTCAAGACTTACCTCGGCGCCAGGTTCTCTCTGTCACAAGGAATGAA
EV528022       --> GAGCTCAAGACTTACCTCGGCGCCAGGTTCTCTCTGTCACAAGG......

               751    -    801
UN22561        --> ACCACATGAGCTTGTCTTCTAGATTTCATCATCTTATCGTTTTGTTTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529384       <-- ..................................................
EV529804       <-- ACCACATGAGCTTGTCTTCTAGATTTCATCATCTTATCGTTTTGTTTCCC
EV529539       <-- ACCACATGAGCTTGTTTTCTAGATTTCATCATCTTATCGTTTTGTTTCCC
EV532120       <-- ACCACATGAGCTTGTCTTCTAGATTTCATCATCTTATCGTTTTGTTTCCC
EX891467       <-- ACCGCATGAGCTTGTCTTCTAGATTTCATCATCTTATCGTCTTGTTTCCC
EV543522       <-- ACCACATGAGCTTGTCTTCTAGATTTCATCATCTTATCGTTTTGTTTCCC
FD961274       <-- ACCACATGAGCTTGTCTTCTAGATTTCATCATCTTATCGTTTTGTTTCCC
EV573867       <-- ACTACATGAGCTTGTCTTCTAGATTTCATCGTCTTATCGTTTTGTTTCCC
EX766445       <-- ACCACATGAGCTTGTCTTCTAGATTTCATCACCTTATCGTTTTGTTTCCC
EX768586       <-- ACCACATGAGCTTGTCTTCTAGATTTCATCATCTTATCGTTTTGTTTCCC
EY893362       <-- ACCACATGAGCTTGTCTTCTAGATTTCATCATCTTATCGTTTTGTTTCCC
EX767280       <-- ACCACATGAGCTTGTCTTCTAGATTTCATCATCTTATCGTTTTGTTTCCC
FD961641       <-- ACCACATGAGCTTGTCTTCTAGATTTCATCATCTTATCGTTTTGTTTCCC
FD546818       <-- ACCACATGAGCTTGTCTTCTAGATTTCATCATCTTATCGTTTTGTTTCCC
EV569291       --> ACTACATGAGCTTGTCTTCTAGATTTCATCGTCTTATCGTTTTGTTTCCC
EV524377       --> ACCACATGAGCTTGTCTTCTAGATTTCATCATCTTATCGTTTTGTTTCCC
EV524932       --> ACCACATGAGCTTGTCTTCTAGATTTCATCATCTTATCGTTTTGTTTCCC
EX762093       --> ACCACATGAGCTTGTCTTCTAGATT-CATCACCTTATCGT..........
EX763152       --> ACCACATGAGCTTGTCTTCTAGATTTCATCATCTTATCGTTTTGTT-CCC
EY896928       --> ACCACATGAGCTTGTCTTCTAGATTTCATCATCTTATCGTTT-GTTTCCC
FD550919       --> ..................................................
EX887290       --> ..................................................
EV547694       --> ACCACATGAGCTTGTCTTCTAGATTTC.......................
EX764722       --> ..................................................
EY905193       --> ..................................................
FD532350       --> ACCACATGAGCTTGTCTTCTAGATT.........................
EV524571       --> ACCACATGAGCTTGTCTTCTAGATTTCATCATCTTATCGTTTTGTTTCCC
FY432022       --> ACCACATGAGCTTGTCTTCTAGATTTCATCATCTTATCGTTTTGTTTCCC
FY443410       --> ACCACATGAGCTTGTCTTCTAGATTTCATCATCTTATCGTTTTGTTTCCC
FY443618       --> ACCACATGAGCTTGTCTTCTAGATTTCATCATCTTATCGTTTTGTTTCCC
FD965573       --> ..................................................
FD966075       --> ..................................................
EW724457       --> ACCGCATGAGCTTGTCTTCTAGATTTCATCATCTTATCGTCTTGTTTCCC
FD946480       --> ACCGCATGAGCTTGTCTTCTAGATTTCATCATCTTATCGTCTTGTTTCCC
EV528022       --> ..................................................

               801    -    851
UN22561        --> TTCATGTTTCA--ACA---TCTGTTTTCCCCTGAGAGTTTTTGTCCCTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529384       <-- ..................................................
EV529804       <-- TTCATGTTTCA--ACA---TCTGTTTTCCCCTGAGAGTTTTTGTCCCTGG
EV529539       <-- TTCATGTTTCA--ACA---TCTGTTTTCCCCTGAGATTTTTTGTCCCTGG
EV532120       <-- TTCATGTTTCA--ACA---TCTGTTTTCCCCTGAGAGTTTTTGTCCCTGG
EX891467       <-- TTCATGTTTCA--ACA---TCTGTTTTCCCCTGAGAGTTTTTGTCCCTGG
EV543522       <-- TTCATGTTTCA--ACA---TCTGTTTTCCCCTGAGAGTTTTTGTCCCTGG
FD961274       <-- TTCATGTTTCA--ACA---TCTGTTTTCCCCTGAGAGTTTTTGTCCCTGG
EV573867       <-- TTCATGTCTCA--ACAACATCTGTTTTCCCCTGAGAGTTTTTGTCCCTGG
EX766445       <-- TTCATGTTTCA--ACA---TCTGTTTTCCCCTGAGAGTTTTTGTCCCTGG
EX768586       <-- TTCATGTTTCA--ACA---TCTGTTTTCCCCTGAGAGTTTTTGTCCCTGG
EY893362       <-- TTCATGTTTCA--ACA---TCTGTTTTCCCCTGAGAGTTTTTGTCCCTGG
EX767280       <-- TTCATGTTTCA--ACA---TCTGTTTTCCCCTGAGAGTTTTTGTCCCTGG
FD961641       <-- TTCATGTTTCA--ACA---TCTGTTTTCCCCTGAGAGTTTTTGTCCCTGG
FD546818       <-- TTCATGTTTCA--ACA---TCTGTTTTCCCCTGAGAGTTTTTGTCCCTGG
EV569291       --> TTCATGTCTCACAACA---TCTGTTT-CCCCTGAGAGTTTTTGTCCCTGG
EV524377       --> TTCATGTTTCA--ACA---TCTGTTT-CCCCTGAGAGTTTT-GTCCCTGG
EV524932       --> TTCATGTTTCA--ACA---TCTGTTT-CCCCTGAGAGTTTTTGTCCCTGG
EX762093       --> ..................................................
EX763152       --> TTCATGTTTCA--ACA---TCTGTTTTCCCCTG.................
EY896928       --> TTCATGT...........................................
FD550919       --> ..................................................
EX887290       --> ..................................................
EV547694       --> ..................................................
EX764722       --> ..................................................
EY905193       --> ..................................................
FD532350       --> ..................................................
EV524571       --> TTCATGTTTCA--ACA---TCTGTTTCCCC....................
FY432022       --> TTCATGTTTCA--ACAACATCTGTTTTCCCCTGAGAGTTTTTGTCCCTGG
FY443410       --> TTCATGTTTCA--ACAACATCTGTTTTCCCCTGAGAGTTTTTGTCCCTGG
FY443618       --> TTCATGTTTCA--ACAACATCTGTTTTCCCCTGAGAGTTTTTGTCCCTGG
FD965573       --> ..................................................
FD966075       --> ..................................................
EW724457       --> TTCATGTTTCA--ACA---TCTGTTTTCCCCTGAGAGTTTTTGTCCCTGG
FD946480       --> TTCATGTTTCA--ACA---TCTGTTTTCCCCTGAGAGTTTTTGTCCCTGG
EV528022       --> ..................................................

               851    -    901
UN22561        --> ATCTTTAAAAAATACACTATTTTCTCTGATTTATATATCAACGTTCTATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529384       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV529804       <-- ATCTTT............................................  Raphanus raphanistrum subsp. maritimus
EV529539       <-- ATCTTTAAAAAATACACTATTTTTTTTGATTT..................  Raphanus raphanistrum subsp. maritimus
EV532120       <-- ATCTTTAAAAAATACACTATTTTCTCTGATTTATATATCAACGTTCTATC  Raphanus raphanistrum subsp. maritimus
EX891467       <-- ATCTTAAAAAAATACACTATTTTCTCTGATTTATATATCAACGTTCTATC  Raphanus sativus var. oleiformis
EV543522       <-- ATCTTTAAAAAATACACTATTTTCTCTGATTTATATATCAACGTTCTATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961274       <-- ATCTTTAAAAAATACACTATTTTCTCTGATTTATATATCAACGTTCTATC  Raphanus raphanistrum subsp. maritimus
EV573867       <-- ATCTT-AAGAAATACACTATTTTCTCTGATTTATATATC...........  Raphanus raphanistrum subsp. landra
EX766445       <-- ATCTTTAAAAAATACACTATTTTCTCTGATTTATATGTCAACGTTCTATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768586       <-- ATCTTTAAAAAATACACTATTTTCTCTGATTTATATATCAACGTTCTATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893362       <-- ATCTTTAAAAAATACACTAT--TCTCTGATTTATATATCAACGTTCTATC  Raphanus raphanistrum subsp. maritimus
EX767280       <-- ATCTTTAAAAAATACACTATTTTCTCTGATTTATATATCAACGTTCTAcc  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961641       <-- ATCTTTAAAAAATACACTATTTTCTCTGATTTATATATCAACGTTCTATC  Raphanus raphanistrum subsp. maritimus
FD546818       <-- ATCTTTAAAAAATACACTATTTTCTCTGATTTATATATCAACGTTCTATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV569291       --> ATCTT--AGAAATACACTATT.............................  Raphanus raphanistrum subsp. landra
EV524377       --> ATCTTTAAAAA-TACACTATTTTCTCTGATT-ATATATCA-CGTTCTATC  Raphanus raphanistrum subsp. maritimus
EV524932       --> ATCTTTAA..........................................  Raphanus raphanistrum subsp. maritimus
EX762093       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX763152       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY896928       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD550919       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX887290       --> ..................................................  Raphanus sativus var. oleiformis
EV547694       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764722       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY905193       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD532350       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV524571       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY432022       --> ATCTTAAAAAAATACACTATTTTCTCTGATTTATATATCAACGTTCTAT.  Raphanus sativus cv GSK3-1
FY443410       --> ATCTTAAAAAAATACACTATTTTCTCTGATTTATATATCAACGTTCTATC  Raphanus sativus cv GSK3-1
FY443618       --> ATCTTAAAAAAATACACTATTTTCTCTGATTTATATATCAACGTTCTATC  Raphanus sativus cv GSK3-1
FD965573       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD966075       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW724457       --> ATCTT-AAAAAATACACTATTTTCTCTGATTTATATATCAACGTTCTAT.  Raphanus sativus cv Early Scarlet Globe
FD946480       --> ATCTTAAAAAAATACACTATTTTCTCTG......................  Raphanus sativus cv Early Scarlet Globe
EV528022       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               901    -    951
UN22561        --> AATGAG..
                   ~~~~~~~~
EV529384       <-- ........
EV529804       <-- ........
EV529539       <-- ........
EV532120       <-- t.......
EX891467       <-- g.......
EV543522       <-- ........
FD961274       <-- ........
EV573867       <-- ........
EX766445       <-- AATGAGac
EX768586       <-- ........
EY893362       <-- ........
EX767280       <-- ........
FD961641       <-- ........
FD546818       <-- AATGAGgc
EV569291       --> ........
EV524377       --> Atga....
EV524932       --> ........
EX762093       --> ........
EX763152       --> ........
EY896928       --> ........
FD550919       --> ........
EX887290       --> ........
EV547694       --> ........
EX764722       --> ........
EY905193       --> ........
FD532350       --> ........
EV524571       --> ........
FY432022       --> ........
FY443410       --> ........
FY443618       --> ........
FD965573       --> ........
FD966075       --> ........
EW724457       --> ........
FD946480       --> ........
EV528022       --> ........