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Alignment for radish unigene UN22562

               1      -     51
UN22562        --> GGATTGAATTCATCTCAGAGGTTGGGAGCAAACCTTAGGTAGTTGAATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720783       <-- ..................................................
EX890828       <-- ..................................................
EV529853       <-- ..................................................
EY909744       <-- ..................................................
FD530271       <-- ..................................................
EV542263       <-- ..................................................
EX886438       --> GGATTGAATTCATCTCAGAGGTTGGGAGCAAACCTTAG-TAGTTGAATCT
EV538194       --> ........................GGAGCAAACCTTAGGTAGTTGAATCT
FD534292       --> ..................................................
EV525000       --> ..................................................
EY913528       --> ..................................................
FD939353       --> ..................................................

               51     -    101
UN22562        --> CCAGAGCTTCAATGGCGATTCGGTGGTCAGAGCTATGTATCGTACTGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720783       <-- ..................................................
EX890828       <-- ..................................................
EV529853       <-- ..................................................
EY909744       <-- ..................................................
FD530271       <-- ..................................................
EV542263       <-- ..................................................
EX886438       --> CCAGAGCTTCAATGGCGATTCGATGGTCAGAGCTATGTATCGTACTGTTG
EV538194       --> CCAGAGCTTCAATGGCGATTCGGTAGTCAGAGCTATGTATCGTACTGTTT
FD534292       --> ..................................................
EV525000       --> ..................................................
EY913528       --> ..................................................
FD939353       --> ..................................................

               101    -    151
UN22562        --> GCACTGTCTTACGCCATCTGCGTCATTGCAGCGAAGAGCTACTACGATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720783       <-- ..................................................
EX890828       <-- ..................................................
EV529853       <-- ..................................................
EY909744       <-- ..................................................
FD530271       <-- ..................................................
EV542263       <-- ..................................................
EX886438       --> GCACTGTCTTACGCCATCTGCGTCATTGCAGCGAAGAGCTACTACGATGT
EV538194       --> GCACTGTCTTACGCCATCTGCGCCATTGCAGCGAAGAGCTACTACGATGT
FD534292       --> ..................................................
EV525000       --> ..................................................
EY913528       --> ..................................................
FD939353       --> ..................................................

               151    -    201
UN22562        --> GTTGCAAGTTCCTAAAGGCGCCTCTGACGAGCAGATCAAGATAGCTTATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720783       <-- ..................................................
EX890828       <-- ..................................................
EV529853       <-- ..................................................
EY909744       <-- ..................................................
FD530271       <-- ..................................................
EV542263       <-- ..................................................
EX886438       --> GTTGCAAGTTCCTAAAGGCGCCTCTGACGAGCAGATCAAGATAGCTTATC
EV538194       --> GTTGCAAGTTCCTAAAGGCGCCTCTGACGAGCAGATCAAGAGAGCTTATC
FD534292       --> ..................................................
EV525000       --> ..................................................
EY913528       --> ..................................................
FD939353       --> ..................................................

               201    -    251
UN22562        --> GCAAACTCGCTTTGAAGTATCATCCTGATAAGAATCAAGGCAACGATGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720783       <-- ..................................................
EX890828       <-- ..................................................
EV529853       <-- ..................................................
EY909744       <-- ..................................................
FD530271       <-- ..................................................
EV542263       <-- ..................................................
EX886438       --> GCAAACTCGCTTTGAAGTATCATCCTGATAAGAATCAAGGCAACGAGGAA
EV538194       --> GCAAACTCGCTTTGAAGTACCATCCTGATAAGAATCAAGGCAACGATGAA
FD534292       --> ..................................................
EV525000       --> ..................................................
EY913528       --> ..................................................
FD939353       --> ..................................................

               251    -    301
UN22562        --> GCTACTCGCAAGTTCGCGGACATCAACAACGCTTATGAAGTGCTATCGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720783       <-- ..................................................
EX890828       <-- ..................................................
EV529853       <-- ..................................................
EY909744       <-- ..................................................
FD530271       <-- ..................................................
EV542263       <-- ..................................................
EX886438       --> GCTACTCGCAAGTTCGCGGACATCAACAACGCTTATGAAGTGCTATCGGA
EV538194       --> GCTACTCGCAAGTTCGCGGACATCAACAACGCTTATGAAGTGCTATCGGA
FD534292       --> ..................................................
EV525000       --> ..................................................
EY913528       --> ..................................................
FD939353       --> ..................................................

               301    -    351
UN22562        --> TGAGGAGAAGAGGGAGATTTATAACAAGTATGGTGAAGAAGGGCTTAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720783       <-- ..................................................
EX890828       <-- ..................................................
EV529853       <-- ..................................................
EY909744       <-- ..................................................
FD530271       <-- ..................................................
EV542263       <-- ..................................................
EX886438       --> TGAGGAGAAGAGGGAGATATATAACAAGTATGGTGAAGAAGGGCTTAAGC
EV538194       --> TGAGGAGAAGAGGGAGATTTATAACAAGTATGGTGAAGAAGGGCTTAAAC
FD534292       --> ..................................................
EV525000       --> ..................................................
EY913528       --> ..................................................
FD939353       --> ..................................................

               351    -    401
UN22562        --> AGCATGCTGCTAATGGAGGACGTGGAGGTGGTGGTGGGGGCATGAATATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720783       <-- ..................................................
EX890828       <-- ..................................................
EV529853       <-- ..................................................
EY909744       <-- ..................................................
FD530271       <-- ..................................................
EV542263       <-- ..................................................
EX886438       --> AGCATGCTGCTAATGGAGGACGTGGAGGTGGTGGTGGGGGCATGAATATG
EV538194       --> AGCATGCTGCTAATGGAGGACGTGGAGGTGGTGGTGGGGGCATGAATATG
FD534292       --> ..................................................
EV525000       --> ..................................................
EY913528       --> ..................................................
FD939353       --> ..................................................

               401    -    451
UN22562        --> CAGGACATCTTTAGCCAGTTTTTTGGTGGTGGTGGTTCGAGGGAGGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720783       <-- ..................................................
EX890828       <-- ..................................................
EV529853       <-- ..................................................
EY909744       <-- ..................................................
FD530271       <-- ..................................................
EV542263       <-- ..................................................
EX886438       --> CAGGACATCTTTAGCCAGTTTTTTGGGGGTGGTGGTTCGAGGGAGGAAGA
EV538194       --> CAGGACATCTTTAGCCAGTTTTTTGGTGGTGGTGGTTCGAGGG.......
FD534292       --> ........................................GGGAGGAAGA
EV525000       --> ..................................................
EY913528       --> ..................................................
FD939353       --> ..................................................

               451    -    501
UN22562        --> AGAGAAGGTCGTCAAGGGTGATGACGTGATTGTGGAACTTGAGGCCACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720783       <-- AGAGAAGGTCGTCAAGGGTGATGACGTGATTGTGGAGCTTGAGGCCACTC
EX890828       <-- ................................TGGAACTTGAGGCCACTC
EV529853       <-- ..................................................
EY909744       <-- ..................................................
FD530271       <-- ..................................................
EV542263       <-- ..................................................
EX886438       --> AGAGAAGGTCGTCAAGGGTGATGACGTGATTGTGGAACTTGAGGCCACTC
EV538194       --> ..................................................
FD534292       --> AGAGAAGGTCGTCAAGGGTGATGACGTGATTGTGGAACTTGAGGCCACTC
EV525000       --> ..............gGGGTGATGACGTGATTGTGGAACTTGAGGCCACTC
EY913528       --> ..................................................
FD939353       --> ..................................................

               501    -    551
UN22562        --> TTGAAGATTTGTACATGGGAGGCTCTGTCAAGGTATGGAGGGAGAAGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720783       <-- TTGAAGATTTGTACATGGGAGGCTCTGTCAAGGTATGGAGGGAGAAGAAT
EX890828       <-- TTGAAGATTTGTACATGGGAGGCTCTGTCAAGGTATGGAGGGAGAAGAAT
EV529853       <-- .......................TCTGTCAAGGTATGGAGGGAGAAGAAT
EY909744       <-- ..................................................
FD530271       <-- ..................................................
EV542263       <-- ..................................................
EX886438       --> TTGAAGATTTGTACATGGGAGGCTCTGTCAAGGTATGGAGGGAGAAGAAT
EV538194       --> ..................................................
FD534292       --> TGGAAGATTTGTACATGGGAGGCTCTGTCAAGGTATGGAGGGAGAAGAAT
EV525000       --> TTGAAGATTTGTACATGGGAGGCTCTGTCAAGGTATGGAGGGAGAAGAAT
EY913528       --> ..................................................
FD939353       --> ..................................................

               551    -    601
UN22562        --> GTAATAAAACCAGCTCCTGGAAAGAGAAAGTGCAACTGCAGGAATGAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720783       <-- GTAATAAAACCAGCTCCTGGAAAGAGAAAGTGCAACTGCAGGAATGAGGT
EX890828       <-- GTAATAAAACCAGCTCCTGGAAAGAGAAAGTTCAACTGCAGGAATGAGGT
EV529853       <-- GTAATAAAACCAGCTCCTGGAAAGAGAAAGTGCAACTGCAGGAATGAGGT
EY909744       <-- ..................................................
FD530271       <-- ..................................................
EV542263       <-- ..................................................
EX886438       --> GTAATAAAACCAGCTCCTGGAAAGAGAAAGTTCAACTGCAGGAATGAGGT
EV538194       --> ..................................................
FD534292       --> GTAATAAAACCAGCTCCTGGAAAGAGAAAGTGCAACTGCAGGAATGAGGT
EV525000       --> GTAATAAAACCAGCTCCTGGAAAGAGAAAGTGCAACTGCAGGAATGAGGT
EY913528       --> ..................................................
FD939353       --> ..................................................

               601    -    651
UN22562        --> TTATCACCGACAGGTTGGTCCTGGAATGTTCCAACAGATGACAGAGCAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720783       <-- TTATCACCGACAGGTTGGTCCTGGAATGTTCCAACAGATGACAGAGCAGG  Raphanus sativus var. oleiformis
EX890828       <-- TTATCACCGACAAGTTGGTCCCGGAATGTTCCAACAGATGACAGAGCAGG  Raphanus sativus var. oleiformis
EV529853       <-- TTATCACAGACAGGTTGGTCCTGGAATGTTCCAACAGATGACAGAGCAGG  Raphanus raphanistrum subsp. maritimus
EY909744       <-- ......................GGAATGTTCCAACAGATGACAGAGCAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD530271       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV542263       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX886438       --> TTATCACCGACAAGTTGGTCCCGGAATGTTCCAACAGATGACAGAGCAG-  Raphanus sativus var. oleiformis
EV538194       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD534292       --> TTATCACAGACAGGTTGGTCCTGGAATGTTCCAACAGATGACAGAGCAGG  Raphanus raphanistrum subsp. maritimus
EV525000       --> TTATCACAGACAGGTTGGTCCTGGAATGTTCCAACAGATGACAGAGCAGG  Raphanus raphanistrum subsp. maritimus
EY913528       --> ......................GGAATGTTCCAACAGATGACAGAGCAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD939353       --> ..................................................  Raphanus sativus var. oleiformis

               651    -    701
UN22562        --> TCTGTGACAAATGCCCAAATGTCAAATACGAACGCGAAGGATACTTTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720783       <-- TCTGTGACAAATGCCCAAATGTCAAATACGAACGCGAAGGATACTTTGTC
EX890828       <-- TCTGTGACAAATGCCCAAATGTCAAATACGAACGCGAAGGATACTTTGTC
EV529853       <-- TCTGTGACAAATGCCCAAATGTCAAATACGAACGCGAAGGATACTTTGTC
EY909744       <-- TCTGTGACAAATGCCCAAATGTCAAATACGAACGCGAAGGATACTTTGTC
FD530271       <-- ..................................................
EV542263       <-- ..................................................
EX886438       --> TCTGTGACAAATGCCCAAATGTCAAATACGAACGCGAAGGATACTTTGTC
EV538194       --> ..................................................
FD534292       --> TCTGTGACAAATGCCCAAATGTCAAATACGAACGCGAAGGATACTTTGTC
EV525000       --> TCTGTGACAAATGCCCAAATGTCAAATACGAACGCGAAGGATACTTTGTC
EY913528       --> TCTGTGACAAATGCCCAAATGTCAAATACGAACGCGAAGGATACTTTGTC
FD939353       --> ..................................................

               701    -    751
UN22562        --> ACAGTTGATATCGAAAAAGGCATGAAAGATGGAGAAGAAGTGTCTTTCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720783       <-- ACAGTTGATATCGAAAAAGGCATGAAAGATGGAGAAGAAGTGTCTTTCTA
EX890828       <-- ACAGTTGATATCGAAAAAGGCATGAAAGATGGAGAAGAAGTGTCTTTCTA
EV529853       <-- ACAGTTGATATCGAAAAAGGCATGAAAGATGGAGAAGAAGTGTCTTTTTA
EY909744       <-- ACAGTTGATATCGAAAAAGGCATGAAAGATGGAGAAGAAGTGTCTTTCTA
FD530271       <-- ..................................................
EV542263       <-- ..................................................
EX886438       --> ACAGTTGATATCGAAAA-GGCATGAAAGATGGAGAA-AAGTGTCTTTCTA
EV538194       --> ..................................................
FD534292       --> ACAGTTGATATCGAAAAAGGCATGAAAGATGGAGAAGAAGTGTCTTTCTA
EV525000       --> ACAGTTGATATCGAAAAAGGCATGAAAGATGGAGAAGAAGTGTCTTTCTA
EY913528       --> ACAGTTGATATCGAAAAAGGCATGAAAGATGGAGAAGAAGTGTCTTTCTA
FD939353       --> ..................................................

               751    -    801
UN22562        --> CGAAGATGGCGAACCTATTCTTGACGGTGATCCTGGTGACCTTAAGTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720783       <-- CGAAGATGGCGAACCTATTCTTGACGGTGATCCTGGTGACCTTAAGTTCC
EX890828       <-- CGAAGATGGCGAACCTATTCTTGACGGTGATCCTGGTGACCTTAAGTTTC
EV529853       <-- CGAAGATGGCGAACCTATTCTTGACGGTGATCCTGGTGACCTTAAGTTTG
EY909744       <-- CGAAGATGGCGAACCTATTCTTGACGGTGATCCTGGTGACCTTAAGTTTC
FD530271       <-- ................ATTCTTGACGGTGATCCTGGTGCCCTTAAGTTTC
EV542263       <-- ..................................................
EX886438       --> CGAAGATGGCGAACtat.................................
EV538194       --> ..................................................
FD534292       --> CGAAGATGGCGAACCTATTCTTGACGGTGATCCTGGTGACCTTAAGTTTC
EV525000       --> CGAAGATGGCGAACCTATTCTTGACGGTGATCCTGGTGACCTTAAGTTTC
EY913528       --> CGAAGATGGCGAACCTATTCTTGACGGTGATCCTGGTGACCTTAAGTTTC
FD939353       --> ..................................................

               801    -    851
UN22562        --> GAATCAAAACTGCACCACATGCCCGTTTCCGGAGAGATGGCAACGATCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720783       <-- GAATCAAAACTGCACCACATGCCCGTTTCCGGAGAGATGGCAACGATCTA
EX890828       <-- GAATCCAAACTGCACCACATGCCCGTTTCCGGAGAGATGGCAACGATCTA
EV529853       <-- GAATCAAAACTGCACCACATGCCCGTTTCCGGAGAGATGGCAACGATCTA
EY909744       <-- GAATCAAAACTGCACCACATGCCCGTTTCCGGAGAGATGGCAACGATCTA
FD530271       <-- GAATCAAAACTGCACCACATGTCCGTTTCCGGAGAGATGGCAACGATCTA
EV542263       <-- .................................................A
EX886438       --> ..................................................
EV538194       --> ..................................................
FD534292       --> GAATCAAAACTGCACCACATGTCCGTTTCCGGAGAGATGGCAACGATCTA
EV525000       --> GAATCAAAACTGCACCACATGCCCGTTTCCGGAGAGATGGCAACGATCTA
EY913528       --> GAATCAAAACTGCACCACATGCCCGTTTCCGGAGAGATGGCAACGATCTA
FD939353       --> ..................................................

               851    -    901
UN22562        --> CACATGACCGTCAACATTACACTGGTTGAGGCGCTTGTTGGTTTTGAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720783       <-- CACATGACCGTCAACATTACACTGGTTGAGGCGCTTGTTGGTTTTGAGAA
EX890828       <-- CACATGACCGTCAACATTACACTGGTTGAGGCGCTTGTTGGTTTTGAGAA
EV529853       <-- CACATGACCGTCAACATTACACTGGTTGAGGCGCTTGTTGGTTTTGAGAA
EY909744       <-- CACATGACCGTCAACATTACACTGGTTGAGGCGCTTGTTGGTTTTGAGAA
FD530271       <-- CACATGCCCGTCAACATTACACTGGTTGAGGCGCTTGTTGGTTTTGAGAA
EV542263       <-- CACATGGCCGTCAACATTACACTGGTTGAGGCGCTAGTTGATTTTGAGAA
EX886438       --> ..................................................
EV538194       --> ..................................................
FD534292       --> CACATGACCGTCAACATTACACTGGTTGAGGCGCTTGTTGGTTTTGAGAA
EV525000       --> CACATGACCGTCAACATTACACTGGTTGAGGCGCTTGTTGGTTTTGAGAA
EY913528       --> CACATGACCGTCAACATTACACTGGTTGAGGCGCTTGTTGGTTTTGAGAA
FD939353       --> ..................................................

               901    -    951
UN22562        --> GTCATTCAAACACTTGGATGATCACGATGTTGACATCGGTTCCAAGGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720783       <-- GTCATTCAAACGCTTGGATGATCACGATGTTGACATCGGTTCCAAGGGAA
EX890828       <-- GTCATTCAAACACTTGGATGATCACGATGTTGACATCGGTTCCAAGGGAA
EV529853       <-- GTCATTCAAACACTTGGATGATCACGATGTTGACATCGGTTCCAAGGGAA
EY909744       <-- GTCATTCAAACACTTGGATGATCACGATGTTGACATCGGTTCCAAGGGAA
FD530271       <-- GTCATTCAAACACTTGGATGATCACGATGTTGACATCGGTTCCAAGGGAA
EV542263       <-- GTCATTCAAGCACTTGGATGATCACGATGTTGACATCGGTTCCAAGGGAA
EX886438       --> ..................................................
EV538194       --> ..................................................
FD534292       --> GTCATTCAAACACTTGGATGATCACGATGTTGACATCGGTTCCAAGGGAA
EV525000       --> GTCATTCAAACACTTGGATGATCACGATGTTGACATCGGTTCCAAGGGAA
EY913528       --> GTCATTCAAACACTTGGATGATCACGATGTTGACATCGGTTCCAAGGGAA
FD939353       --> .............................gTGACATCGGTTCCAAGGGAA

               951    -   1001
UN22562        --> TTACAAAGCCAAAGGAAGTGAAGAAGTTCAAAGGAGAAGGGATGCCACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720783       <-- TTACAAAGCCAAAGGAAGTGAAGAAGTTCAAAGGAGAAGGGATGCCACTT
EX890828       <-- TTACAAAGCCAAAGGAAGTGAAGAAGTTCAAAGGAGAAGGGATGCCACTT
EV529853       <-- TTACAAAGCCAAAGGAAGTGAAGAAGTTCAAAGGAGAAGGGATGCCACTT
EY909744       <-- TTACAAAGCCAAAGGAAGTGAAAAAGTTCAAAGGAGAAGGGATGCCACTT
FD530271       <-- TTACAAAGCCAAAGGAAGTGAAGAAGTTCAAAGGAGAAGGGATGCCACTT
EV542263       <-- TTACAAAGCCAAAGGAAGTGAAGAAGTTCAAAGGAGAAGGGATGCCACTT
EX886438       --> ..................................................
EV538194       --> ..................................................
FD534292       --> TTACAAAGCCAAAGGAAGTGAAGAAGTTCAAAGGAGAAGGGATGCCACTT
EV525000       --> TTACAAAGCCAAAGGAAGTGAAGAAGTTCAAAGGAGAAGGGATGCCACTT
EY913528       --> TTACAAAGCCAAAGGAAGTGAAAAAGTTCAAAGGAGAAGGGATGCCACTT
FD939353       --> TTACAAAGCCAAAGGAAGTGAAGAAGTTCCAAGGAGAAGGGATGCCACTT

               1001   -   1051
UN22562        --> CACTACAGCACAAAGAAAGGCAACCTCTTTGTCACTTTTGAGGTTTTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720783       <-- CACTACAGCACAAAGAAAGGCAACCTCTTTGTCACTTTTGAGGTTTTGTT
EX890828       <-- CACTACAGCACAAAGAAAGGCAACCTCTTTGTCACTTTTGAGGTTTTGTT
EV529853       <-- CACTACAGCACAAAGAAAGGCAACCTCTTTGTCACTTTTGAGGTTTTGTT
EY909744       <-- CACTACAGCACAAAGAAAGGCAACCTCTTTGTCACTTTTGAGGTTTTGTT
FD530271       <-- CACTACAGCACAAAGAAAGGCAACCTTTTTGTCACTTTTGAGGTTTTGTT
EV542263       <-- CACTACAGCACAAAGAAAGGCAACCTCTTTGTCACTTTTGAGGTTTTGTT
EX886438       --> ..................................................
EV538194       --> ..................................................
FD534292       --> CACTACAGCACAAAGAAAGGCAACCTCTTTGTCACTTTTGAGGTTTTGTT
EV525000       --> CACTACAGCACAAAGAAAGGCAACCTCTTTGTCACTTTTGAGGTTTTGTT
EY913528       --> CACTACAGCACAAAGAAAGGCAACCTCTTTGTCACTTTTGAGGTTTTGTT
FD939353       --> CACTACAGCACAAAGAAAGGCAACCTCTTTGTCACTTTTGAGGTTTTGTT

               1051   -   1101
UN22562        --> TCCTTCTTCACTCACTGAGGATCAGAAGAAGAATATCAAACAAGTCTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720783       <-- TCCTTCTTCACTCACTGAGGATCAGAAGAAGAATATCAAACAAGTCTTGG
EX890828       <-- TCCTTCTTCACTCACTGAGGATCAGAAGAAGAATATCAAACAAATCTTGG
EV529853       <-- TCCTTCTTCACTCACTGAGGATCAGAAGAAGAATATCAAACAAGTCTTGG
EY909744       <-- TCCTTCTTCACTCACTGAGGATCAGAAGAAGAATATCAAACAAGTCTTGG
FD530271       <-- TCCTTCTTCACTCACTGAGGATCAGAAGAAGAATATCAAACAAGTCTTGG
EV542263       <-- TCCTTCTTCACTCACTGAGGATCAGAAGAAGAAAATCAAACAAGTCTTGG
EX886438       --> ..................................................
EV538194       --> ..................................................
FD534292       --> TCCTTCTTCACTCACTGAGGATCAGAAGAAGAATATCAAACAAGTCTTGG
EV525000       --> TCCTTCTTCACTCACTGAGGATCAGAAGAAGAATATCAAACAAGTCTTGG
EY913528       --> TCCTTCTTCACTCACTGAGGATCAGAAGAAGAATATCAAACAAGTCTTGG
FD939353       --> TCCTTCTTCACTCACTGAGGATCAGAAGAGGAATATCAAACAAATCTTGG

               1101   -   1151
UN22562        --> CTTAGTACTCTCTCTTTAGAATTTTGTTGTTTAAATAGAACTTGTAATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720783       <-- CTTAGTACTCTCTCTTTAGAATTTTGTTGTTTAAATAGAACTTGTAATGA
EX890828       <-- CTTAGTACTCTCTCTTTAGAATTTTGTTGTTTAAATAGAACTTGTAATGA
EV529853       <-- CTTAGTACTCTCTCTTTAGAATTTTGTTGTTTAAATAGAACTTGTAATGA
EY909744       <-- CTTAGTACTCTCTCTTTAGAATTTTGTTGTTTAAATAGAACTTGTAATGA
FD530271       <-- CTTAGTACTCTCTCTTTAGAATTTTGTTGTTTAAATAGAACTTGTAATGA
EV542263       <-- CTTAGTAt..........................................
EX886438       --> ..................................................
EV538194       --> ..................................................
FD534292       --> CTTAGTACTCTCTCTTTAGAATTTTGTTGTTTAAATAGAACTTGTAATGA
EV525000       --> CTTAGTACTCTCTCTTTAGAATTTTGTTGTTTAAATAGAACTTGTAATGA
EY913528       --> CTTAGTACTCTCTCTTTAGAATTTTGTTGTTTAAATAGAACTTGTAATGA
FD939353       --> CTTAGTACTCTCTCTTTAGAATTTTGTTGTTTAAATAGAACTTGTAATGA

               1151   -   1201
UN22562        --> TCCTTAATATTTGTAACACTACTAGGTTTGTTTTAATATAGAATGATTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720783       <-- TCCTTAATATTTGTAACACTACTAGGTTTGTTTTAATATAGAATGATTGA
EX890828       <-- TCCTTAATATTTGTAACACTACTAGGTTTGTTTTAATATAGAATGATTGA
EV529853       <-- TCCTTAATATTTGTAACACTACTAGGTTTGTTTTAATATAGAATGATTGA
EY909744       <-- TCCTTAATATTTGTAACACTACTAGGTTTGTTTTAATATAGAATGATTGA
FD530271       <-- TCCTTAATATTTGTAACACTACTAGGTTTGTTTTAATATAGAATGATTGA
EV542263       <-- ..................................................
EX886438       --> ..................................................
EV538194       --> ..................................................
FD534292       --> TCCTTAATATTTGTA-CACTACTAGGTT-GTTTTAATATAGAATGATTGA
EV525000       --> TCCTTAATATTTGTAACACTACTAG-TTTGTTTTAATATAGAATGATTGA
EY913528       --> TCCTTAATATTTGTAACACTACTAGGTTTGTTTTAATATAGAATGATTGA
FD939353       --> TCCTTAATATTTGTAACACTACTAGGTTTGTTTTAATATAGATTGATTGA

               1201   -   1251
UN22562        --> TCTAATTGTCTTTTTATGTATCAAATTCTTTCATGATTTCACTAAAATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720783       <-- TCTAATTGTCTTTTTATGTATCAAATCCTTTCATGATTTC..........
EX890828       <-- TCT...............................................
EV529853       <-- TCTAATTGTCTTTTTATGTATCAAATTCTTTCATGATTTCACTAAAATAT
EY909744       <-- TCTAATTGTCTTTTTATGTATCAAATTCTTTCATGATTTCACTAAAATAT
FD530271       <-- TCTAATTGTCTTTTTATGTATCAAATTCTTTCATGATTTCACTAAAATAT
EV542263       <-- ..................................................
EX886438       --> ..................................................
EV538194       --> ..................................................
FD534292       --> TCTAATTGTCTTTT-ATGTATCAAATTCTTTCATGATTTCACTAAAATAT
EV525000       --> TCTAATTGTCTTTTTATGTATCAAATTCTTTCATGATTTCACTAAAATAT
EY913528       --> TCTAATTGTCTTTTTATGTATCAAATTCTTTCATGATTTCACTAAAATAT
FD939353       --> TCTAATTGTCTTTT....................................

               1251   -   1301
UN22562        --> GATTTACGCAAA
                   ~~~~~~~~~~~~
EW720783       <-- ............
EX890828       <-- ............
EV529853       <-- GATTTACac...
EY909744       <-- GATTTACGC...
FD530271       <-- GATTTAC.....
EV542263       <-- ............
EX886438       --> ............
EV538194       --> ............
FD534292       --> GATTTA......
EV525000       --> GATTTAC.....
EY913528       --> GATTTACGCAAA
FD939353       --> ............