-3     -     47
UN22643        --> ....GGATATCAAAGATTAAAACATCAATAACTTATTACAATTTCTCTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542758       <-- ....GGATATCAAAGATTAAAACATCAATAACTTATTACAATTTCTCTAA
EW719001       <-- ....GGATATCAAAGATTAAAACATCAATAACTTATTACAATTTCTTTAA
EX751938       <-- ....GGATATCAAAGATTAAAACATCAATAACTTATTACAATTTCTCTAA
EX752151       <-- ....GGATATCAAAGATTAAAACATCAATAACTTATTACAATTTCTCTAA
EX767859       <-- ....GGATATCAAAGATTAAAACATCAATAACTTATTACAATTTCTCTAA
EX777285       <-- ....GGATATCAAAGATTAAAACATCAATAACTTATTACAATTTCTCTAA
EX900019       <-- ....GGATATCAAAGATTAAAACATCAATAACTTATTACAATTTCTCTA-
FD554111       <-- ....GGATATCAAAGATTAAAACATCAATAACTTATTACAATTTCTTTAA
FD573985       <-- ....GGATATCAAAGATTAAAACATCAATAACTTATTACAATTTCTCTAA
FD531581       <-- .....GATATCAAAGATTAAAACATCAATAACTTATTACAATTTCTCTAA
FD937216       <-- ggattcATATCAAAGATTAAAACATCAATAACTTATTACAATTTCTCTAA
EX758796       <-- .......gATCAAAGATTAAAACATCAATAACTTATTACAATTTCTCTAA
EX760710       <-- ......ggATCAAAGATTAAAACATCAATAACTTATTACAATTTCTTTAA
EY945146       <-- ...........AAAGATTAAAACATCAATAACTTATTACAATTTCTCTAA
EY902383       <-- ..................................................
EY934280       <-- ..................................................
EY944123       <-- ..................................................
FD951752       <-- ..................................................
EV538829       --> ....GGATATCAAAGATTAAAACATCAATAACTTATTACAATTTCTCTAA
EW714242       --> ....GGATATCAAAGATTAAAACATCAATAACTTATTACAATTTCTCTAA
EW726714       --> ....GGATATCAAAGATTAAAACATCAATAACTTATTACAATTTCTCTAA
EX747845       --> ....GGATATCAAAGATTAAAACATCAATAACTTATTACAATTTCTCTAA
EX748117       --> ....GGATATCAAAGATTAAAACATCAATAACTTATTACAATTTCTCTAA
EX749379       --> ....GGATATCAAAGATTAAAACATCAATAACTTATTACAATTTCTCTAA
EX754267       --> ....GGATATCAAAGATTAAAACATCAATAACTTATTACAATTTCTCTAA
EX757978       --> ....GGATATCAAAGATTAAAACATCAATAACTTATTACAATTTCTCTAA
EX763819       --> ....GGATATCAAAGATTAAAACATCAATAACTTATTACAATTTCTCTAA
EX896026       --> ....GGATATCAAAGATTAAAACATCAATAACTTATTACAATTTCTCTAA
EY906127       --> ....GGATATCAAAGATTAAAACATCAATAACTTATTACAATTTCTCTAA
EY938073       --> ....GGATATCAAAGATTAAAACATCAATAACTTATTACAATTTCTCTAA
EY948412       --> ....GGATATCAAAGATTAAAACATCAATAACTTATTACAATTTCTCTAA
EY949679       --> ....GGATATCAAAGATTAAAACATCAATAACTTATTACAATTTCTCTAA
FD540427       --> ....GGATATCAAAGATTAAAACATCAATAACTTATTACAATTTCTCTAA
FD543192       --> ....GGATATCAAAGATTAAAACATCAATAACTTATTACAATTTCTCTAA
FD558160       --> ....GGATATCAAAGATTAAAACATCAATAACTTATTACAATTTCTCTAA
FD569872       --> ....GGATATCAAAGATTAAAACATCAATAACTTATTACAATTTCTCTAA
FD974098       --> ....GGATATCAAAGATTAAAACATCAATAACTTATTACAATTTCTCTAA
FD536042       --> .....GATATCAAAGATTAAAACATCAATAACTTATTACAATTTCTCTAA
FD941612       --> ggattcATATCAAAGATTAAAACATCAATAACTTATTACAATTTCTCTAA
EX754481       --> .......gATCAAAGATTAAAACATCAATAACTTATTACAATTTCTCTAA
EX757031       --> ......ggATCAAAGATTAAAACATCAATAACTTATTACAATTTCTCTAA
FD937555       --> ......ggATCAAAGATTAAAACATCAATAACTTATTACAATTTCTCTAA
FD939153       --> ......ggATCAAAGATTAAAACATCAATAACTTATTACAATTTCTCTAA
FD955722       --> ......ggATCAAAGATTAAAACATCAATAACTTATTACAATTTCTCTAA
FY430896       --> ..................................................
EX754429       --> ..................................................
FD978528       --> ..................................................

               47     -     97
UN22643        --> TAAAAAATGTGGACGATCAACAAGTTTTTCTTCCTTCTTCCAGTTGCATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542758       <-- TAAAAAATGTGGACGATCAACAAGTTTTTCTTCCTTCTTCCAGTTGCATT
EW719001       <-- TAAAAAATGTGGACGATCAACAAGTTTTTCTTCCTTCTTCCAGTTGCATT
EX751938       <-- TAAAAAATGTGGACGATCAACAAGTTTTTCTTCCTTCTTCCAGTTGCATT
EX752151       <-- TAAAAAATGTGGACGATCAACAAGTTTTTCTTCCTTCTTCCAGTTGCATT
EX767859       <-- TAAAAAATGTGGACGATCATCAAGTTTTTCTTCCTTCTTCCAGTTGCATT
EX777285       <-- TAAAAAATGTGGACGATCAACAAGTTTTTCTTCCTTCTTCCAGTTGCATT
EX900019       <-- -AAAAAATGTGGACGATCAACAAGTTTTTCTTCCTTCTTCCAGTTGCATT
FD554111       <-- TAAAAAATGTGGACGATCAACAAGTTTTTCTTCCTTCTTCCAGTTGCATT
FD573985       <-- TAAAAAATGTGGACGATCAACAAGTTTTTCTTCCTTCTTCCAGTTGCATT
FD531581       <-- TAAAAAATGTGGACGATCAACAAGTTTTTCTTCCTTCTTCCAGTTGCATT
FD937216       <-- TAAAAAATGTGGACGATCAACAAGTTTTTCTTCCTTCTTCCAGTTGCATT
EX758796       <-- TAAAAAATGTGGACGATCAACAAGTTTTTCTTCCTTCTTCCAGTTGCATT
EX760710       <-- TAAAAAATGTGGACGATCAACAAGTTTTTCTTCCTTCTTCCAGTTGCATT
EY945146       <-- TAAAAAATGTGGACGATCAACAAGTTTTTCTTCCTTCTTCCAGTTGCATT
EY902383       <-- ........................TTTTTCTTCCTTCTTCCAGTTGCATT
EY934280       <-- ........................TTTTTCTTCCTTCTTCCAGTTGCATT
EY944123       <-- ..................................................
FD951752       <-- ..................................................
EV538829       --> TAAAAAATGTGGACGATCAACAAGTTTTTCTTCCTTCTTCCAGTTGCATT
EW714242       --> TAAAAAATGTGGACGATCAACAAGTTTTTCTTCCTTCTTCCAGTTGCATT
EW726714       --> TAAAAAATGTGGACGATCAACAAGTTTTTCTTCCTTCTTCCAGTTGCATT
EX747845       --> TAAAAAATGTGGACGATCAACAAGTTTTTCTTCCTTCTTCCAGTTGCATT
EX748117       --> TAAAAAATGTGGACGATCAACAAGTTTTTCTTCCTTCTTCCAGTTGCATT
EX749379       --> TAAAAAATGTGGACGATCAACAAGTTTTTCTTCCTTCTTCCAGTTGCATT
EX754267       --> TAAAAAATGTGGACGATCAACAAGTTTTTCTTCCTTCTTCCAGTTGCATT
EX757978       --> TAAAAAATGTGGACGATCAACAAGTTTTTCTTCCTTCTTCCAGTTGCATT
EX763819       --> TAAAAAATGTGGACGATCATCAAGTTTTTCTTCCTTCTTCCAGTTGCATT
EX896026       --> --AAAAATGTGGACGATCAACAAGTTTTTCTTCCTTCTTCCAGTTGCATT
EY906127       --> TAAAAAATTTGGACGATCAACAAGTTTTTCTTCCTTCTTCCAGTTGCATT
EY938073       --> TAAAAAATGTGGACGATCAACAAGTTTTTCTTCCTTCTTCCAGTTGCATT
EY948412       --> TAAAAAATGTGGACGATCAACAAGTTTTTCTTCCTTCTTCCAGTTGCATT
EY949679       --> TAAAAAATGTGGACGATCAACAAGTTTTTCTTCCTTCTTCCAGTTGCATT
FD540427       --> TAAAAAATGTGGACGATCAACAAGTTTTTCTTCCTTCTTCCAGTTGCATT
FD543192       --> TAAAAAATGTGGACGATCAACAAGTTTTTCTTCCTTCTTCCAGTTGCATT
FD558160       --> TAAAAAATGTGGACGATCAACAAGTTTTTCTTCCTTCTTCCAGTTGCATT
FD569872       --> TAAAAAATGTGGACGATCAACAAGTTTTTCTTCCTTCTTCCAGTTGCATT
FD974098       --> TAAAAAATGTGGACGATCAACAAGTTTTTCTTCCTT--TCCAGTTGCATT
FD536042       --> TAAAAAATGTGGACGATCAACAAGTTTTTCTTCCTTCTTCCAGTTGCATT
FD941612       --> TAAAAAATGTGGACGATCAACAAGTTTTTCTTCCTTCTTCCAGTTGCATT
EX754481       --> TAAAAAATGTGGACGATCAACAAGTTTTTCTTCCTTCTTCCAGTTGCATT
EX757031       --> TAAAAAATGTGGACGATCAACAAGTTTTTCTTCCTTCTTCCAGTTGCATT
FD937555       --> TAAAAAATGTGGACGATCAACAAGTTTTTCTTCCTTCTTCCAGTTGCATT
FD939153       --> TAAAAAATGTGGACGATCAACAAGTTTTTCTTCCTTCTTCCAGTTGCATT
FD955722       --> TAAAAAATGTGGACGATCAACAAGTTTTTCTTCCTTCTTCCAGTTGCATT
FY430896       --> ....................CAAGTTTTTCTTCCTTCTTCCAGTTGCATT
EX754429       --> ........................TTTTTCTTCCTTCTTCCAGTTGCATT
FD978528       --> ..................................................

               97     -    147
UN22643        --> CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542758       <-- CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
EW719001       <-- CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
EX751938       <-- CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
EX752151       <-- CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
EX767859       <-- CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
EX777285       <-- CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
EX900019       <-- CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
FD554111       <-- CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
FD573985       <-- CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
FD531581       <-- CATGGCCGTGTTCGGTACAGCCCAAACGTTACCTTCGCAGCCTATACCTG
FD937216       <-- CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
EX758796       <-- CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
EX760710       <-- CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
EY945146       <-- CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
EY902383       <-- CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
EY934280       <-- CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
EY944123       <-- ..................................................
FD951752       <-- ..................................................
EV538829       --> CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
EW714242       --> CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
EW726714       --> CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
EX747845       --> CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
EX748117       --> CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
EX749379       --> CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
EX754267       --> CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
EX757978       --> CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
EX763819       --> CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
EX896026       --> CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
EY906127       --> CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
EY938073       --> CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
EY948412       --> CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
EY949679       --> CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
FD540427       --> CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
FD543192       --> CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
FD558160       --> CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
FD569872       --> CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
FD974098       --> CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
FD536042       --> CATGGCCGTGTTCGGTACAGCCCAAACGTTACCTTCGCAGCCTATACCTG
FD941612       --> CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
EX754481       --> CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
EX757031       --> CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
FD937555       --> CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
FD939153       --> CATGGCCGTGTTCAGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
FD955722       --> CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
FY430896       --> CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATATCTG
EX754429       --> CATGGCCGTGTTCGGTACAGCTCAAACGTTACCTTCGCAGCCTATACCTG
FD978528       --> ..................................................

               147    -    197
UN22643        --> GACCGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542758       <-- GACAGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW719001       <-- GACCGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus sativus var. oleiformis
EX751938       <-- GACCGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus raphanistrum subsp. maritimus
EX752151       <-- GACCGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus raphanistrum subsp. maritimus
EX767859       <-- GACCGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777285       <-- GACCGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus raphanistrum subsp. landra
EX900019       <-- GACCGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus sativus cv Early Scarlet Globe
FD554111       <-- GACCGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus raphanistrum subsp. landra
FD573985       <-- GACCGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus sativus cv Early Scarlet Globe
FD531581       <-- GACCGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus raphanistrum subsp. maritimus
FD937216       <-- GACCGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus sativus var. oleiformis
EX758796       <-- GACAGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760710       <-- GACAGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945146       <-- GACCGGACCCAACAGATTGTATGTCATCCCTGTATGCTATCCCCAACTGT  Raphanus sativus cv Rat-Tail Radish #3870
EY902383       <-- GACAGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY934280       <-- GACCGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus sativus cv Early Scarlet Globe
EY944123       <-- ....GGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus sativus cv Rat-Tail Radish #3870
FD951752       <-- ...............................GTATGCTATTCCCAACTGT  Raphanus sativus cv Rat-Tail Radish #3870
EV538829       --> GACAGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714242       --> GACCGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus sativus var. oleiformis
EW726714       --> GACCGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus sativus cv Early Scarlet Globe
EX747845       --> GACCGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus raphanistrum subsp. maritimus
EX748117       --> GACCGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus raphanistrum subsp. maritimus
EX749379       --> GACCGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus raphanistrum subsp. maritimus
EX754267       --> GACAGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757978       --> GACAGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763819       --> GACCGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896026       --> GACCGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus sativus cv Early Scarlet Globe
EY906127       --> GACAGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY938073       --> GACCGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus sativus cv Early Scarlet Globe
EY948412       --> GACCGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus sativus cv Rat-Tail Radish #3870
EY949679       --> GACCGGACCCAACAGATTGTATGTCATCCCTGTATGCTATCCCCAACTGT  Raphanus sativus cv Rat-Tail Radish #3870
FD540427       --> GACAGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543192       --> GACAGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD558160       --> GACCGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus raphanistrum subsp. landra
FD569872       --> GACCGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus sativus cv Early Scarlet Globe
FD974098       --> GACAGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536042       --> GACCGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus raphanistrum subsp. maritimus
FD941612       --> GACCGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus sativus var. oleiformis
EX754481       --> GACAGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757031       --> GACAGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD937555       --> GACCGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus sativus var. oleiformis
FD939153       --> GACCGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus sativus var. oleiformis
FD955722       --> GACCGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus sativus cv Rat-Tail Radish #3870
FY430896       --> GACCGGACCCAACAGATTGTATGTCATCCCTATATGCTATTCCCAACTGT  Raphanus sativus cv GSK3-1
EX754429       --> GACAGGACCCAACAGATTGTATGTCATCCCTGTATGCTATTCCCAACTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978528       --> ...........ACAAATTGTATGTCCTCCCTGTATGCTATTCCCAACTGT  Raphanus raphanistrum subsp. raphanistrum (NY)

               197    -    247
UN22643        --> CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542758       <-- CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
EW719001       <-- CTCCAAGAAATTGTCCGATCGTTTGTAAACGGAGAAATCGGGACTATTGG
EX751938       <-- CTCCAAGAAATCGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
EX752151       <-- CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
EX767859       <-- CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
EX777285       <-- CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATTGGGACTATTGG
EX900019       <-- CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
FD554111       <-- TTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
FD573985       <-- CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
FD531581       <-- CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
FD937216       <-- CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
EX758796       <-- CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
EX760710       <-- CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
EY945146       <-- CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
EY902383       <-- CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
EY934280       <-- TTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
EY944123       <-- TTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
FD951752       <-- CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
EV538829       --> CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
EW714242       --> CTCCAAGAAATTGTCCGATCGTTTGTAAACGGAGAAATCGGGACTATTGG
EW726714       --> CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
EX747845       --> CTCCAAGAAATCGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
EX748117       --> CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
EX749379       --> CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
EX754267       --> CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
EX757978       --> CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
EX763819       --> CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
EX896026       --> CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
EY906127       --> CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
EY938073       --> CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
EY948412       --> CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
EY949679       --> CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
FD540427       --> CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
FD543192       --> CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
FD558160       --> CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
FD569872       --> CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
FD974098       --> CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
FD536042       --> CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
FD941612       --> CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
EX754481       --> CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
EX757031       --> CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
FD937555       --> CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
FD939153       --> CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
FD955722       --> CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
FY430896       --> CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
EX754429       --> CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG
FD978528       --> CTCCAAGAAATTGTCCAATCGTTTGTAAACGGAGAAATCGGGACTATTGG

               247    -    297
UN22643        --> TCACTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542758       <-- TCATTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW719001       <-- TCACTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus sativus var. oleiformis
EX751938       <-- TCACTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus raphanistrum subsp. maritimus
EX752151       <-- TCACTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus raphanistrum subsp. maritimus
EX767859       <-- TCACTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777285       <-- TCACTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus raphanistrum subsp. landra
EX900019       <-- TCACTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus sativus cv Early Scarlet Globe
FD554111       <-- TCACTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus raphanistrum subsp. landra
FD573985       <-- TCACTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus sativus cv Early Scarlet Globe
FD531581       <-- TCACTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATT....  Raphanus raphanistrum subsp. maritimus
FD937216       <-- TCACTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus sativus var. oleiformis
EX758796       <-- TCATTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760710       <-- TCATTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945146       <-- TCACTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus sativus cv Rat-Tail Radish #3870
EY902383       <-- TCATTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTATTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY934280       <-- TCACTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus sativus cv Early Scarlet Globe
EY944123       <-- TCACTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus sativus cv Rat-Tail Radish #3870
FD951752       <-- TCACTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus sativus cv Rat-Tail Radish #3870
EV538829       --> TCATTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714242       --> TCACTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus sativus var. oleiformis
EW726714       --> TCACTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus sativus cv Early Scarlet Globe
EX747845       --> TCACTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus raphanistrum subsp. maritimus
EX748117       --> TCACTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus raphanistrum subsp. maritimus
EX749379       --> TCACTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus raphanistrum subsp. maritimus
EX754267       --> TCATTCTTGTTGTCATGCCTTCTTGGGTCTCAGTACAGATTGTATTACTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757978       --> TCATTCTTGTTGTCGTGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763819       --> TCACTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896026       --> TCACTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus sativus cv Early Scarlet Globe
EY906127       --> TCATTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY938073       --> TCACTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus sativus cv Early Scarlet Globe
EY948412       --> TCACTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus sativus cv Rat-Tail Radish #3870
EY949679       --> TCACTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus sativus cv Rat-Tail Radish #3870
FD540427       --> TCATTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543192       --> TCATTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD558160       --> TCACTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus raphanistrum subsp. landra
FD569872       --> TCACTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus sativus cv Early Scarlet Globe
FD974098       --> TCATTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536042       --> TCACTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus raphanistrum subsp. maritimus
FD941612       --> TCACTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus sativus var. oleiformis
EX754481       --> TCATTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757031       --> TCATTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD937555       --> TCACTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus sativus var. oleiformis
FD939153       --> TCACTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus sativus var. oleiformis
FD955722       --> TCACTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus sativus cv Rat-Tail Radish #3870
FY430896       --> TCACTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus sativus cv GSK3-1
EX754429       --> TCATCCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978528       --> TCACTCTTGTTGTCATGCCTTCTTGGGTCTCAGTGCAGATTGTATTACTG  Raphanus raphanistrum subsp. raphanistrum (NY)

               297    -    347
UN22643        --> AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTCTAAGGGATCATTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542758       <-- AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTCTAAGGGATCATTGT
EW719001       <-- AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTTTAAGGGATCATTGT
EX751938       <-- AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTCTAAGGGATCATTGT
EX752151       <-- AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTCTAAGGGATCATTGT
EX767859       <-- AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTCTAAGGGATCATTGT
EX777285       <-- AGAGGTTTGCCTTCTCTCCCGACTTCCCTCCGACTCTAAGGGATCATTGT
EX900019       <-- AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTCTAAGGGATCATTGT
FD554111       <-- AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTTTAAGGGATCATTGT
FD573985       <-- AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTCTAAGGGATCATTGT
FD531581       <-- ..................................................
FD937216       <-- AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTTTAAGGGATCATTGT
EX758796       <-- AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTCTAAGGGATCATTGT
EX760710       <-- AGGGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTCTAAGGGATCATTGT
EY945146       <-- AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTCTAAGGGATCATTGT
EY902383       <-- AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTTTAAGGGATCATTGT
EY934280       <-- AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTTTAAGGGATCATTGT
EY944123       <-- AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTTTAAGGGATCATTGT
FD951752       <-- AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTTTAAGGGATCATTGT
EV538829       --> AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTCTAAGGGATCATTGT
EW714242       --> AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTCTAAGGGATCATTGT
EW726714       --> AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTCTAAGGGATCATTGT
EX747845       --> AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTCTAAGGGATCATTGT
EX748117       --> AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTCTAAGGGATCATTGT
EX749379       --> AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTCTAAGGGATCATTGT
EX754267       --> AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTCTAAGGGATCATTGT
EX757978       --> AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTCTAAGGGATCATTGT
EX763819       --> AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTCTAAGGGATCATTGT
EX896026       --> AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTCTAAGGGATCATTGT
EY906127       --> AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTCTAAGGGATCATTGT
EY938073       --> AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTCTAAGGGATCATTGT
EY948412       --> AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTCTAAGGGATCATTGT
EY949679       --> AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTCTAAGGGATCATTGT
FD540427       --> AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTCTAAGGGATCATTGT
FD543192       --> AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTCTAAGGGATCATTGT
FD558160       --> AGAGGTT-GCCTTCGCTCCCGACTTCCCTCCGACTCTAA...........
FD569872       --> AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTCTAAGGGATCATTGT
FD974098       --> AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTCTAAGGGATCATTGT
FD536042       --> AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTCTAAGGGATCATTGT
FD941612       --> AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTCTAAGGGATCATTGT
EX754481       --> AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTCTAAGGGATCATTGT
EX757031       --> AGGGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTCTAAGGGATCATTGT
FD937555       --> AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTCTAAGGGATCATTGT
FD939153       --> AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTCTAAGGGATCATTGT
FD955722       --> AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTCTAAGGGATCATTGT
FY430896       --> AGAGGTTTGTCTTCGCTCCCGACTTCCCTCCGACTCTAAGGGATCATTGT
EX754429       --> AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTCTAAGGGATCATTGT
FD978528       --> AGAGGTTTGCCTTCGCTCCCGACTTCCCTCCGACTCTAAGGGATCATTGT

               347    -    397
UN22643        --> TCCGGACATTTATGATAATAACAATTAATGCCATTATCCTTTCGAGTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542758       <-- TCCGGACATTTATGATAATAACAATTAATGCCATTACCCTTTCGAGTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW719001       <-- TCCGGACATTTATGATAATAACAATTAATGCCATTATCCTTTCGAGTCTT  Raphanus sativus var. oleiformis
EX751938       <-- TCCGGACATTTATGATAATAACAATTAATGCCATTATCCTTTCGAGTCTT  Raphanus raphanistrum subsp. maritimus
EX752151       <-- TCCGGACATTTATGATAATAACAATTAATGCCATTATCCTTTCGAGTCTT  Raphanus raphanistrum subsp. maritimus
EX767859       <-- TCCGGACATTTATGATAATAACAATTAATGTCATTATCCTTTCGAGTCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777285       <-- TCCGGACATTTATGATAATAACAATTAATGCCATTATCCTTTCGAGTCTT  Raphanus raphanistrum subsp. landra
EX900019       <-- TCCGGACATTTATGATAATAACAATTAATGCCATTATCCTTTCGAGTCTT  Raphanus sativus cv Early Scarlet Globe
FD554111       <-- TCCGGACATTTATGATAATAACAATTAATGCCATTATCCTTTCGAGTTTT  Raphanus raphanistrum subsp. landra
FD573985       <-- TCCGGACATTTATGATAATAACAATTAATGCCATTATCCTTTCGAGTCTT  Raphanus sativus cv Early Scarlet Globe
FD531581       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD937216       <-- TCCGGACATTTATGATAATAACAATTAGTGCCATTATCCTTTCGAGTCTT  Raphanus sativus var. oleiformis
EX758796       <-- TCCGGACATTTATGATAATAACAATTAATGCCATTACCCTTTCGAGTTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760710       <-- TCCGGACATTTATGATAATAACAATTAATGCCATTACCCTTTCGAGTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945146       <-- TCCGGACATTTATGATAACAACAATTAATGCCATTATCCTTTCGAGTCTT  Raphanus sativus cv Rat-Tail Radish #3870
EY902383       <-- TCCGGACATTTATGATAATAACAATTAATGCCATTACCCTTTCGAGTTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY934280       <-- TCCGGACATTTATGATAATAACAATTAATGCCATTATCCTTTCGAGTTTT  Raphanus sativus cv Early Scarlet Globe
EY944123       <-- TCCGGACATTTATGATAATAACAATTAATGCCATTATCCTT.........  Raphanus sativus cv Rat-Tail Radish #3870
FD951752       <-- TCCGGACATTTATGATAATAACAATTAATGCCATTATCCTTTCGAGTCTT  Raphanus sativus cv Rat-Tail Radish #3870
EV538829       --> TCCGGACATTTATGATAATAACAATTAATGCCATTACCCTTTCGAGTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714242       --> TCCGGACATTTATGATAATAACAATTAATGCCATTATCCTTTCGAGTCTT  Raphanus sativus var. oleiformis
EW726714       --> TCCGGACATTTATGATAATAACAATTAATGCCATTATCCTTTCGAGTCTT  Raphanus sativus cv Early Scarlet Globe
EX747845       --> TCCGGACATTTATGATAATAACAATTAATGCCATTATCCTTTCGAGTCTT  Raphanus raphanistrum subsp. maritimus
EX748117       --> TCCGGACATTTATGATAATAACAATTAATGCCATTATCCTTTCGAGTCTT  Raphanus raphanistrum subsp. maritimus
EX749379       --> TCCGGACATTTATGATAATAACAATTAATGCCATTATCCTTTCGAGTCTT  Raphanus raphanistrum subsp. maritimus
EX754267       --> TCCGGACATTTATGATAATAACAATTAATGCCATTACCCTTTCGAGTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757978       --> TCCGGACATTTATGATAATAACAATTAATGCCATTACTCTTTCGAGTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763819       --> TCCGGACATTTATGATAATAACAATTAATGTCATTATCCTTTCGAGTCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896026       --> TCCGGACATTTATGATAATAACAATTAATGCCATTATCCTTTCGAGTCTT  Raphanus sativus cv Early Scarlet Globe
EY906127       --> TCCGGACATTTATGATAATAACAATTAATGCCATTACCCTTTCGAGTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY938073       --> TCCGGACATTTATGATAATAACAATTAATGCCATTATCCTTTCGAGTCTT  Raphanus sativus cv Early Scarlet Globe
EY948412       --> TCCGGACATTTATGATAATAACAATTAATGCCATTATCCTTTCGAGTCTT  Raphanus sativus cv Rat-Tail Radish #3870
EY949679       --> TCCGGACATTTATGATAACAACAATTAATGCCATTATCCTTTCGAGTCTT  Raphanus sativus cv Rat-Tail Radish #3870
FD540427       --> TCCGGACATTTATGATAATAACAATTAATGCCATTACCCTTTCGAGTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543192       --> TCCGGACATTTATGATAATAACAATTAATGCCATTACCCTTTCGAGTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD558160       --> ..................................................  Raphanus raphanistrum subsp. landra
FD569872       --> TCCGGACATTTATGATAATAACAATTAATGCCATTATCCTTTCGAGTCTT  Raphanus sativus cv Early Scarlet Globe
FD974098       --> TCCGGACATTTATGATAATAACAATTAATGCCATTACCCTTTCGAGTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536042       --> TCCGGACATTTATGATAATAACAATTAATGCCATTATCCTTTCGAGTCTT  Raphanus raphanistrum subsp. maritimus
FD941612       --> TCCGGACATTTATGATAATAACAATTAGTGCCATTATCCTTTCGAGTCTT  Raphanus sativus var. oleiformis
EX754481       --> TCCGGACATTTATGATAATAACAATTAATGCCATTACCCTTTCGAGTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757031       --> TCCGGACATTTATGATAATAACAATTAATGCCATTACCCTTTCGAGTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD937555       --> TCCGGACATTTATGATAATAACAATTAATGCCATTATCCTTTCGAGTCTT  Raphanus sativus var. oleiformis
FD939153       --> TCCGGACATTTATGATAATAACAATTAATGCCATTATCCTTTCGAGTCTT  Raphanus sativus var. oleiformis
FD955722       --> TCCGGACATTTATGATAATAACAATTAATGCCATTATCCTTTCGAGTCTT  Raphanus sativus cv Rat-Tail Radish #3870
FY430896       --> TCCGGCCATTTATGATAATAACAATTAATGCCATTATCCTTTCGAGTCTT  Raphanus sativus cv GSK3-1
EX754429       --> TCCGGACATTTATGATAATAACAATTAATGCCATTACCCTTTCGAGTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978528       --> TCCGGACATTTATGATAATAACAATTAATGCCATTATCCTTTCGAGTC--  Raphanus raphanistrum subsp. raphanistrum (NY)

               397    -    447
UN22643        --> CGTTTCAAGGGAGTTTATTGTTATTATCCGACATGTTCTAGGTCATAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542758       <-- CGTTTCAAGGGAGTTTATTGTTATTATCCTACATGTTCTAGGTCATAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW719001       <-- CGTTTCAAGGGAGTTTATTGTTATTATCCGACATGTTCTAGGTCATAAAG  Raphanus sativus var. oleiformis
EX751938       <-- CGTTTCAAGGGAGTTTATTGTTATTATCCGACATGTTCTAGGTCATAAAG  Raphanus raphanistrum subsp. maritimus
EX752151       <-- CGTTTCAAGGGAGTTTATTGTTATTATCCGACATGTTCTAGGTCATAAAG  Raphanus raphanistrum subsp. maritimus
EX767859       <-- CGTTTCAAGGGAGTTTATTGTTATTATCCGACATGTTCTAGGTCATAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777285       <-- CGTTTCAAGGGAGTTTATTGTTATTATCCGACATGTTTTAGGTCATAAAG  Raphanus raphanistrum subsp. landra
EX900019       <-- CGTTTCAAGGGAGTTTATTGTTATTATCCGACATGTTCTAGGTCATAAAG  Raphanus sativus cv Early Scarlet Globe
FD554111       <-- CGTTTCAAGGGAGTTTATTGTTATTATCCGACATGTTTTAGGTCATAAAG  Raphanus raphanistrum subsp. landra
FD573985       <-- CGTTTCAAGGGAGTTTATTGTTATTATCCGACATGTTCTAGGTCATAAAG  Raphanus sativus cv Early Scarlet Globe
FD531581       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD937216       <-- CGTTTCAAGGGAGTTTATTGTTATTATCCGACATGTTCTAGGTCATAAAG  Raphanus sativus var. oleiformis
EX758796       <-- CGTTTCAAGGGAGTTTATTGTTATTATCCTACATGTTTTAGGTCATAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760710       <-- CGTTTCAAGGGAGTTTATTGTTATTATCCTACATGTTCTAGGTCATAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945146       <-- CGTTTCAAGGGAGTTTATTGTTATTATCCGACATGTTCTAGGTCATAAAG  Raphanus sativus cv Rat-Tail Radish #3870
EY902383       <-- CGTTTCAAGGGAGTTTATTGTTATTATCCTACATGTTTTAGGTCAaaa..  Raphanus raphanistrum subsp. raphanistrum (MS)
EY934280       <-- CGTTTCAAGGGAGTTTATTGTTATTATCCGACATGTTTTAGGTCATAAAG  Raphanus sativus cv Early Scarlet Globe
EY944123       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD951752       <-- CGTTTCAAGGGAGTTTATTGTTATTATCCGACATGTTCTAGGTCATAAAG  Raphanus sativus cv Rat-Tail Radish #3870
EV538829       --> CGTTTCAAGGGAGTTTATTGTTATTATCCTACATGTTCTAGGTCATAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714242       --> CGTTTCAAGGGAGTTTATTGTTATTATCCGACATGTTCTAGGTCATAAAG  Raphanus sativus var. oleiformis
EW726714       --> CGTTTCAAGGGAGTTTATTGTTATTATCCGACATGTTCTAGGTCATAAAG  Raphanus sativus cv Early Scarlet Globe
EX747845       --> CGTTTCAAGGGAGTTTATTGTTATTATCCGACATGTTCTAGGTCATAAAG  Raphanus raphanistrum subsp. maritimus
EX748117       --> CGTTTCAAGGGAGTTTATTGTTATTATCCGACATGTTCTAGGTCATAAAG  Raphanus raphanistrum subsp. maritimus
EX749379       --> CGTTTCAAGGGAGTTTATTGTTATTATCCGACATGTTCTAGGTCATAAAG  Raphanus raphanistrum subsp. maritimus
EX754267       --> CGTTTCAAGGGAGTTTATTGTTATTATTCTACATGTTCTAGGTCATAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757978       --> CGTTTCAAGGGAATTTATTGTTATTATCCTACATGTTCTAGGTCATAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763819       --> CGTTTCAAGGGAGTTTATTGTTATTATCCGACATGTTCTAGGTCATAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896026       --> CGTTTCAAGGGAGTTTATTGTTATTATCCGACATGTTCTAGGTCATAAAG  Raphanus sativus cv Early Scarlet Globe
EY906127       --> CGTTTCAAGGGAGTTTATTGTTATTATCCTACATGTTCTAAGTCATAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY938073       --> CGTTTCAAGGGAGTTTATTGTTATTATCCGACATGTTCTAGGTCATAAAG  Raphanus sativus cv Early Scarlet Globe
EY948412       --> CGTTTCAAGGGAGTTTATTGTTATTATCCGACATGTTCTAGGTCATAAAG  Raphanus sativus cv Rat-Tail Radish #3870
EY949679       --> CGTTTCAAGGGAGTTTATTGTTATTATCCGACATGTTCTAGGTCATAAAG  Raphanus sativus cv Rat-Tail Radish #3870
FD540427       --> CGTTTCAAGGGAGTTTATTGTTATTATCCTACATGTTCTAGGTCATAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543192       --> CGTTTCAAGGGAGTTTATTGTTATTATCCTACATGTTCTAGGTCATAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD558160       --> ..................................................  Raphanus raphanistrum subsp. landra
FD569872       --> CGTTTCAAGGGAGTTTATTGTTATTATCCGACATGTTCTAGGTCATAAAG  Raphanus sativus cv Early Scarlet Globe
FD974098       --> CGTTTCAAGGGAGTTTATTGTTATTATCCTACATGTTCTAGGTCATAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536042       --> CGTTTCAAGGGAGTTTATTGTTATc.........................  Raphanus raphanistrum subsp. maritimus
FD941612       --> CGTTTCAAGGGAGTTTATTGTTATTATCCGACATGTTCTAGGTCATAAAG  Raphanus sativus var. oleiformis
EX754481       --> CGTTTCAAGGGAGTTTATTGTTATTATCCTACATGTTCTAGGTCATAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757031       --> CGTTTCAAGGGAGTTTATTGTTATTATCCTACATGTTCTAGGTCATAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD937555       --> CGTTTCAAGGGAGTTTATTGTTATTATCCGACATGTTCTAGGTCATAAAG  Raphanus sativus var. oleiformis
FD939153       --> CGTTTCAAGGGAGTTTATTGTTATTATCCGACATGTTCTAGGTCATAAAG  Raphanus sativus var. oleiformis
FD955722       --> CGTTTCAAGGGAGTTTATTGTTATTATCCGACATGTTCTAGGTCATAAAG  Raphanus sativus cv Rat-Tail Radish #3870
FY430896       --> CGTTTCAAGGGAGTTTATTGTTATTATCCGACATGTTCTAGGTCATAAAG  Raphanus sativus cv GSK3-1
EX754429       --> CGTTTCAAGGGAGTTTATTGTTATTATCCTACATGTTCTAGGTCATAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978528       --> -GTTTCAAGGGAGTTTATTGTTATTATCCGACATGTTCTAGGTCATAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)

               447    -    497
UN22643        --> ATTTGCTATCAAACAAAATTTACTGTTTCTGCTCAAAAAA-CAACTTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542758       <-- ATTTGCTATCAAACA--ATGTTCTGTTTCTGCTCAAAAAAACAACTTTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW719001       <-- ATTTGCTATCAAACAAAATTTACTGTTTCTGCTCAAAAAA-CAACTTTTA  Raphanus sativus var. oleiformis
EX751938       <-- ATTTGCTATCAAACAAAATTTACTGTTTCTGCTCAAAAAA-CAACTTTTA  Raphanus raphanistrum subsp. maritimus
EX752151       <-- ATTTGCTATCAAACAAAATTTACTGTTTCTGCTCAAAAAA-CAACTTTTA  Raphanus raphanistrum subsp. maritimus
EX767859       <-- ATTTGCTAT-AAACAAAATTTACTGct.......................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777285       <-- ATTTGCTATCAAACAAAATTTACTGTTTCTGCTCAAAAAA-CAACTTTTA  Raphanus raphanistrum subsp. landra
EX900019       <-- ATTTGCTATCAAATAAAATTTACTGTTTCTGCc.................  Raphanus sativus cv Early Scarlet Globe
FD554111       <-- ATTTGCTATCAAACAAAATTTACTGTTTTTGCTCAAAAAA-CAACTTTTA  Raphanus raphanistrum subsp. landra
FD573985       <-- ATTTGCTATCAAACAAAATTTACTGTTTCTGCTCAAAAAA-CAACTTTTA  Raphanus sativus cv Early Scarlet Globe
FD531581       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD937216       <-- ATTTGCTATCAAACAAAATTTACTGTTTCTGCTCAAAAAA-CAACTTTTA  Raphanus sativus var. oleiformis
EX758796       <-- ATTTGCTATCAGACA--ATGTTCTGTTTCTGCcc................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760710       <-- ATTTGCTATCAAACA--ATGTTCTGTTTCTGCTCAAAAAAACAACTTTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945146       <-- ATTTGCTATCAAACAAAATTTACTGTTTCTGCTCAAAAAA-CAACTTTTA  Raphanus sativus cv Rat-Tail Radish #3870
EY902383       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY934280       <-- ATTTGCTATCAAACAAAATTTACTGTTTCTGCTCAAAAAA-CAACTTTTA  Raphanus sativus cv Early Scarlet Globe
EY944123       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD951752       <-- ATTTGCTATCAAACAAAATTTACTGTTTTTGCTCTAAAAA-CAACTTTTA  Raphanus sativus cv Rat-Tail Radish #3870
EV538829       --> ATTTGCTATCAAACAA--TGTTCTGTTTCTGCTCAAAAAAACAACTTTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714242       --> ATTTGCTATCAAACAAAATTTACTGTTTCTGCTCAAAAAA-CAACTTTTA  Raphanus sativus var. oleiformis
EW726714       --> ATTTGCTATCAAACAAAATTTACTGTTTCTGCTCAAAAAA-CAACTTTTA  Raphanus sativus cv Early Scarlet Globe
EX747845       --> ATTTGCTATCAAACAAAATTTACTGTTTCTGCTCAAAAAA-CAACTTTTA  Raphanus raphanistrum subsp. maritimus
EX748117       --> ATTTGCTATCAAACAAAATTTACTGTTTCTGCTCAAAAAA-CAACTTTTA  Raphanus raphanistrum subsp. maritimus
EX749379       --> ATTTGCTATCAAACAAAATTTACTGTTTCTGCTCAAAAAA-CAACTTTTA  Raphanus raphanistrum subsp. maritimus
EX754267       --> ATTTGCTATCAAACAA--TGTTCTGTTTCTGCTCAAAAAA-CAACTTTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757978       --> ATTTGCTATCAAACAA--TGTTCTGTTTCTGCTCAAAAAA-CAACTTTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763819       --> ATTTGCTAT-AAACAAAATTTACTGct.......................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896026       --> ATTTGCTATCAAATAAAATTTACTGTTTCTGCc.................  Raphanus sativus cv Early Scarlet Globe
EY906127       --> ATTTGCTATCAAACAA--TGTTCTGTTTCTGCTCAAAAAA-CAACTTTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY938073       --> ATTTGCTATCAAACAAAATTTACTGTTTCTGCTCAAAAAA-CAACTTTTA  Raphanus sativus cv Early Scarlet Globe
EY948412       --> ATTTGCTATCAAACAAAATTTACTGTTTCTGCTCAAAAAA-CAACTTTTA  Raphanus sativus cv Rat-Tail Radish #3870
EY949679       --> ATTTGCTATCAAACAAAATTTACTGTTTCTGCTCAAAAAA-CAACTTTTA  Raphanus sativus cv Rat-Tail Radish #3870
FD540427       --> ATTTGCTATCAAACAA--TGTTCTGTTTCTGCTCAAAAAA-CAACTTTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543192       --> ATTTGCTATCAAACAA--TGTTCTGTTTCTGCTCAAAAAA-CAACTTTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD558160       --> ..................................................  Raphanus raphanistrum subsp. landra
FD569872       --> ATTTGCTATCAAACAAAATTTACTGTTTCTGCTCAAAAAA-CAACTTTTA  Raphanus sativus cv Early Scarlet Globe
FD974098       --> ATTTGCTATCAAACAA--TGTTCTGTTTCTGCTCAAAAAA-CAACTTTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536042       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD941612       --> ATTTGCTATCAAACAAAATTTACTGTTTCTGCTCAAAAAA-CAACTTTTA  Raphanus sativus var. oleiformis
EX754481       --> ATTTGCTATCAGACAA--TGTTCTGTTTCTGCcc................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757031       --> ATTTGCTATCAAACAA--TGTTCTGTTTCTGCTCAAAAAAACAACTTTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD937555       --> ATTTGCTATCAAACAAAATTTACTGTTTCTGCTCAAAAAA-CAACTTTTA  Raphanus sativus var. oleiformis
FD939153       --> ATTTGCTATCAAACAAAATTTACTGTTTCTGCTCAAAAAA-CAACTTTTA  Raphanus sativus var. oleiformis
FD955722       --> ATTTGCTATCAAACAAAATTTACTGTTTCTGCTCTAAAAA-CAACTTTTA  Raphanus sativus cv Rat-Tail Radish #3870
FY430896       --> ATTTGCTATCAAACAAAATTTACTGTTTCTGCTCAAAAAA-CAACTTTTA  Raphanus sativus cv GSK3-1
EX754429       --> ATTTGCTATCAAACAA--TGTTCTGTTTCTGCTCAAAAAA-CAACTTTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978528       --> ATTTGCTAT-AAACAAAATTTACTGT........................  Raphanus raphanistrum subsp. raphanistrum (NY)

               497    -    547
UN22643        --> ACTGCCATATATATTTTGTTGTTAAAAAA-----CTGCCATATTTCATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542758       <-- ACTGCCATATATATTTTGTTGTTAAAAAAAAAAACTGCCATATTTCATGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW719001       <-- ACTGCCATATATATTTTGTTGTTAAAAAA-----CTGCCATATTTCATGT  Raphanus sativus var. oleiformis
EX751938       <-- ACTGCCATATATATTTTGTTGTTAAAAAA-----CTGCCATATTTCATGT  Raphanus raphanistrum subsp. maritimus
EX752151       <-- ACTGCCATATATATTTTGTTGTTAAAAAA-----CTGCCATATTTCATGT  Raphanus raphanistrum subsp. maritimus
EX767859       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777285       <-- ACTGCCATATATATTTTGTTGTTAAAAA------CTGCCATATTTCATGT  Raphanus raphanistrum subsp. landra
EX900019       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD554111       <-- ACTGCCATATATATTTTGTTGTTAAAAAA-----CTGCCATATTTCATGT  Raphanus raphanistrum subsp. landra
FD573985       <-- ACTGCCATATATATTTTGTTGTTAAAAAA-----CTGCCATATTTCATGT  Raphanus sativus cv Early Scarlet Globe
FD531581       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD937216       <-- ACTGCCATATATATTTTGTTGTTAAAAAA-----CTGCCATATTTCATGT  Raphanus sativus var. oleiformis
EX758796       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760710       <-- ACTGCCATATATATTTTGTTGTTAAAAAA---AACTGCCATATTTCATGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945146       <-- ACTGCCATATATATTTTGTTGTTAAAAAA-----CTGCCATATTTCATGT  Raphanus sativus cv Rat-Tail Radish #3870
EY902383       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY934280       <-- ACTGCCATATATATTTTGTTGTTAAAAAA-----CTGCCATATTTCATGT  Raphanus sativus cv Early Scarlet Globe
EY944123       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD951752       <-- ACTGCCATATATATTTTGTTGTTAAAAAA-----CTGCCATATTTCATGT  Raphanus sativus cv Rat-Tail Radish #3870
EV538829       --> ACTGCCATATATATTTTGTTGTTAAAAAAAAAAACTGCCATATTTCATGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714242       --> ACTGCCATATATATTTTGTTGTTAAAAAA-----CTGCCATATTTCATGT  Raphanus sativus var. oleiformis
EW726714       --> ACTGCCATATATATTTTGTTGTTAAAAAA-----CTGCCATATTTCATGT  Raphanus sativus cv Early Scarlet Globe
EX747845       --> ACTGCCATATATATTTTGTTGTTAAAAAA-----CTGCCATATTTCATGT  Raphanus raphanistrum subsp. maritimus
EX748117       --> ACTGCCATATATATTTTGTTGTTAAAAAA-----CTGCCATATTTCATGT  Raphanus raphanistrum subsp. maritimus
EX749379       --> ACTGCCATATATATTTTGTTGTTAAAAAA-----CTGCCATATTTCATGT  Raphanus raphanistrum subsp. maritimus
EX754267       --> ACTGCCATATATATTTTGTTGTTAAAAAA--AAACTGCCATATTTCATGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757978       --> ACTGCCATATATATTTTGTTGTTAAAAAA-AAAACTGCCATATTTCATGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763819       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896026       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY906127       --> ACTGCCATATATATTTTGTTGTTAAAAAA--AAACTGCCATATTTCATGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY938073       --> ACTGCCATATATATTTTGTTGTTAAAAAA-----CTGCCATATTTCATGT  Raphanus sativus cv Early Scarlet Globe
EY948412       --> ACTGCCATATATAT....................................  Raphanus sativus cv Rat-Tail Radish #3870
EY949679       --> ACTGCCATATATATTTTGTTGTTAAAAAA-----CTGCCATATTTCATGT  Raphanus sativus cv Rat-Tail Radish #3870
FD540427       --> ACTGCCATATATATTTTGTTGTTAAAAAA--AAACTGCCATATTTCATGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543192       --> ACTGCCATATATATTTTGTTGTTAAAAAAAAAAACTGCCATATTTCATGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD558160       --> ..................................................  Raphanus raphanistrum subsp. landra
FD569872       --> ACTGCCATATATATTTTGTTGTTAAAAAA-----CTGCCATATTTCATGT  Raphanus sativus cv Early Scarlet Globe
FD974098       --> ACTGCCATATATATTTTGTTGTTAAAAAA--AAACTGCCATATTTCATGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536042       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD941612       --> ACTGCCATATATATTTTGTTGTTAAAAAA-----CTGCCATATTTCATGT  Raphanus sativus var. oleiformis
EX754481       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757031       --> ACTGCCATATATATTTTGTTGTTAAAAAA---AACTGCCATATTTCATGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD937555       --> ACTGCCATATATATTTTGTTGTTAAAAAA-----CTGCCATATTTCATGT  Raphanus sativus var. oleiformis
FD939153       --> ACTGCCATATATATTTTGTTGTTAAAAAA-----CTGCCATATTTCATGT  Raphanus sativus var. oleiformis
FD955722       --> ACTGCCATATATAT....................................  Raphanus sativus cv Rat-Tail Radish #3870
FY430896       --> ACTGCCATATATATTTTGTTGTTAAAAAA-----CTGCCATATTTCATGT  Raphanus sativus cv GSK3-1
EX754429       --> ACTGCCATAT........................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978528       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               547    -    597
UN22643        --> TGATGTAAACATCTTGCGTATAACTAAATAATAATAAGGATAATTTCATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542758       <-- TGATGTAAACATCTTGCGTATAACTAAATAATAATAAGGATAATTTCt..
EW719001       <-- TGATGTAAACATCTTGCGTATAACTAAATAATAATAAGGATAATTTCAc.
EX751938       <-- TGATGTAAACATCTTGCGTATAACTAAATAATAATAAGGATAATTTCAT.
EX752151       <-- TGATGTAAACATCTTGCGTATAACTAAATAATAATAAGGATAATTTCAT.
EX767859       <-- ..................................................
EX777285       <-- TGATGTAAACATCTTGCGTATAACTAAATAATAATAAGGATAATTTCAcg
EX900019       <-- ..................................................
FD554111       <-- cg................................................
FD573985       <-- TGATGTAAACATCTTGCGTATAACTAAATAATAATAAGGATAATTTC...
FD531581       <-- ..................................................
FD937216       <-- TGATGTAAACATCTTGCGTATAACTAAATAATAATAAGGATAATTTCAc.
EX758796       <-- ..................................................
EX760710       <-- TGATGTAAACATCTTGCGTATAACTAAATAATAATAAGGATAATTTCAc.
EY945146       <-- TGATGTAAACATCTTGCGTATAACTAAATAATAATAAGGATAATTTCAT.
EY902383       <-- ..................................................
EY934280       <-- TGATGTAAACATCTTGCGTATAACTAAATAATAATAAGGATAATTTCAT.
EY944123       <-- ..................................................
FD951752       <-- TGATGTAAACATCTTGCGTATAACTAAATAATAATAAGGATAATTTCATA
EV538829       --> TGATGTAAACATCTTGCGTATAACTAAATAATAATAAGGATAATTTCt..
EW714242       --> TGATGTAAACATCTTGCGTATAACTAAATAATAATAAGGATAATTTCAc.
EW726714       --> TGATGTAAACATCTTGCGTATAACTAAATAATAATAAGGATAATTTCAT.
EX747845       --> TGATGTAAACATCTTGCGTATAACTAAATAATAATAAGGATAATTTCAT.
EX748117       --> TGATGTAAACATCTTGCGTATAACTAAATAATAATAAGGATAATTTCAT.
EX749379       --> TGATGTAAACATCTTGCGTATAACTAAATAATAA................
EX754267       --> TGATGTAAACATCTTGCGTATAACTAAATAATAATAAGGATAATTTC...
EX757978       --> TGATGTAAACATCTTGCGTATAACTAAATAATAATAAGGATAATTTCAT.
EX763819       --> ..................................................
EX896026       --> ..................................................
EY906127       --> TGGTGTAAACATCTTGCGTATAACTAAATAATAATAAGGATAATTTCA..
EY938073       --> TGATGTAAACATCTTGCGTATAACTAAATAATAATAAGGATAATTTCAT.
EY948412       --> ..................................................
EY949679       --> TGATGTAAACATCTTGCGTATAACTAAATAATAATAAGGATAATTTCATA
FD540427       --> TGATGTAAACATCTTGCGTATAACTAAATAATAATAAGGATAATTTCA..
FD543192       --> TGATGTAAACATCTTGCGTATAACTAAATAATAATAAGGATAATT.....
FD558160       --> ..................................................
FD569872       --> TGATGTAAACATCTTGCGTATAACTAAATAATAATAAGGATAATTTC...
FD974098       --> TGATGTAAACATCTTGCGTATAACTAAATAATAATAAGGATAATTT....
FD536042       --> ..................................................
FD941612       --> TGATGTAAACATCTTGCGTATAACTAAATAATAATAAGGATAATTTCAc.
EX754481       --> ..................................................
EX757031       --> TGATGTAAACATCTTGCGTATAACTAAATAATAATAAGGATAATTTCAc.
FD937555       --> TGATGTAAGCATCTTGCGTATAACTAAATAATAATAAGGATAATTTC...
FD939153       --> TGATGTAAACATCTTGCGTATAACTAAATAATAATAAGGATAATTTCA..
FD955722       --> ..................................................
FY430896       --> TGATGTAAACATCTTGCGTATAACTAAATAATAATAAGGATAATTTCATA
EX754429       --> ..................................................
FD978528       --> ..................................................

               597    -    647
UN22643        --> TT.....
                   ~~~~~~~
EV542758       <-- .......
EW719001       <-- .......
EX751938       <-- .......
EX752151       <-- .......
EX767859       <-- .......
EX777285       <-- .......
EX900019       <-- .......
FD554111       <-- .......
FD573985       <-- .......
FD531581       <-- .......
FD937216       <-- .......
EX758796       <-- .......
EX760710       <-- .......
EY945146       <-- .......
EY902383       <-- .......
EY934280       <-- .......
EY944123       <-- .......
FD951752       <-- TT.....
EV538829       --> .......
EW714242       --> .......
EW726714       --> .......
EX747845       --> .......
EX748117       --> .......
EX749379       --> .......
EX754267       --> .......
EX757978       --> .......
EX763819       --> .......
EX896026       --> .......
EY906127       --> .......
EY938073       --> .......
EY948412       --> .......
EY949679       --> aaaaaaa
FD540427       --> .......
FD543192       --> .......
FD558160       --> .......
FD569872       --> .......
FD974098       --> .......
FD536042       --> .......
FD941612       --> .......
EX754481       --> .......
EX757031       --> .......
FD937555       --> .......
FD939153       --> .......
FD955722       --> .......
FY430896       --> TTt....
EX754429       --> .......
FD978528       --> .......