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Alignment for radish unigene UN22648

               1      -     51
UN22648        --> GGGGAATCAATAGAATAGAATGGCGAAGGAACTAGCAGAGAAAGCTAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768785       <-- ..................................................
EY893653       <-- ..................................................
FY440439       <-- ..................................................
FD545490       <-- ..................................................
FD969739       <-- ..................................................
EW728281       <-- ..................................................
EY937359       <-- ..................................................
EY941865       --> GGGGAATCAATAGAATAGAATGGCGAAGGAACTAGCAGAGAAAGCTAAAG
FD532157       --> .........ggAGAATAGAATGGCGAAGGAACTAGCAGAGAAAGCTAAAG
FY454240       --> ..........aAGAATAGAATGGCGAAGGAACTAGCAGAGAAAGCTAAAG
EX765131       --> ..........ggGAATAGAATGGCGAAGGAACTAGCAGAGAAAGCTAAAG
FY442828       --> ................................................AG
EY916332       --> ..................................................
FD974217       --> ..................................................
EV550675       --> ..................................................
EY941541       --> ..................................................
EX889825       --> ..................................................

               51     -    101
UN22648        --> AGGCCTTCTTAGATGACGACTTCGATGTGGCCGTTGACTTATACTCCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768785       <-- ..................................................
EY893653       <-- ..................................................
FY440439       <-- ..................................................
FD545490       <-- ..................................................
FD969739       <-- ..................................................
EW728281       <-- ..................................................
EY937359       <-- ..................................................
EY941865       --> AGGCCTTCTTAGATGACGACTTCGATGTGGCCGTTGACTTATACTCCAAA
FD532157       --> AGGCCTTCTTAGATGACGACTTCGATGTGGCCGTTGACTTATACTCCAAA
FY454240       --> AGGCCTTCTTAGATGACGACTTCGATGTGGCCGTTGACTTATACTCCAAA
EX765131       --> AGGCCTTCTTAGATGACGACTTCGATGTGGCCGTTGACTTATACTCCAAA
FY442828       --> AGGCCTTCTTAGATGACGACTTCGATGTGGCCGTTGACTTATACTCCAAA
EY916332       --> ..................................................
FD974217       --> ..................................................
EV550675       --> ..................................................
EY941541       --> ..................................................
EX889825       --> ..................................................

               101    -    151
UN22648        --> GCCATTGACTTGGATCCCTCTTGCGCCGCCTTCTTCGCCGATCGTGCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768785       <-- ..................................................
EY893653       <-- ..................................................
FY440439       <-- ..................................................
FD545490       <-- ..................................................
FD969739       <-- ..................................................
EW728281       <-- ..................................................
EY937359       <-- ..................................................
EY941865       --> GCCATTGACTTGGATCCCTCTTGCGCCGCCTTCTTCGCCGATCGTGCTCA
FD532157       --> GCCATTGAATTGTATCCCTGTTGTGCCGCCTTCTTCGCCGATCGTGCTCA
FY454240       --> GCCATTGACTTGGATCCCTCTTGCGCCGCCTTCTTCGCCGATCGTGCTCA
EX765131       --> GCCATTGACTTGGATCCCTCTTGCGCCGCCTTCTTCGCCGATCGTGCTCA
FY442828       --> GCCATTGACTTGGATCCCTCTTGCGCCGCCTTCTTCGCCGATCGTGCTCA
EY916332       --> ..................................................
FD974217       --> ..................................................
EV550675       --> ..................................................
EY941541       --> ..................................................
EX889825       --> ..................................................

               151    -    201
UN22648        --> GGCCAACATCAAAACCAATAACTTCACTGAAGCTGTTGCAGATGCGAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768785       <-- ..................................................
EY893653       <-- ..................................................
FY440439       <-- ..................................................
FD545490       <-- ..................................................
FD969739       <-- ..................................................
EW728281       <-- ..................................................
EY937359       <-- ..................................................
EY941865       --> GGCCAACATCAAAACCAATAACTTCACTGAAGCTGTTGCAGATGCGAACA
FD532157       --> GGCCAACATCAAAACCAATAACTTCACTGAAGCTGTTGCAGATGCGAACA
FY454240       --> GGCCAACATCAAAACCCATAACTTCACTGAAGCTGTTGCAGATGCGAACA
EX765131       --> GGCCAACATCAAAACCAGTAACTTCACTGAAGCTGTTGCAGATGCGAACA
FY442828       --> GGCCAACATCAAAACCCATAACTTCACTGAAGCTGTTGCAGATGCGAACA
EY916332       --> ..................................................
FD974217       --> ..................................................
EV550675       --> ..................................................
EY941541       --> ..................................................
EX889825       --> ..................................................

               201    -    251
UN22648        --> AAGCCATCGAGTTGGAGCCTACGTTGGCCAAAGCTTACCTCCGAAAAGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768785       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893653       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FY440439       <-- ..................................................  Raphanus sativus cv GSK3-1
FD545490       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969739       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW728281       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY937359       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY941865       --> AAGCCATCGAGTTGGAACCTACTTTGGCCAAAGCTTACCTCCGAAA-GGG  Raphanus sativus cv Early Scarlet Globe
FD532157       --> AAGCCATCGAGTTGGAGCCTACGTTGGCCAAAGCGTACCTCCGAAAAGGG  Raphanus raphanistrum subsp. maritimus
FY454240       --> AAGCCATCGAGTTGGAGCCTACGTTGGCCAAAGCTTACCTCCGAAA-GGG  Raphanus sativus cv GSK3-1
EX765131       --> AAGCCATCGAGTTGGAGCCTACGTTGGCCAAAGCGTACCTCCGAAAAGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY442828       --> AAGCCATCGAGTTGGAGCCTACGTTGGCCAAAGCTTACCTCCGAAA-GGG  Raphanus sativus cv GSK3-1
EY916332       --> ....................................gCCTCCGAAAAGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD974217       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550675       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY941541       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX889825       --> ..................................................  Raphanus sativus var. oleiformis

               251    -    301
UN22648        --> TACTGCTTGTATGAAGCTGGAAGAATATAGAACTGCTAAATCAGCCCTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768785       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893653       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FY440439       <-- ..................................................  Raphanus sativus cv GSK3-1
FD545490       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969739       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW728281       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY937359       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY941865       --> TACTGCTTGTATGAAGCTGGAAGAATATAGAACTGCTAAATCAGCCCTAG  Raphanus sativus cv Early Scarlet Globe
FD532157       --> -ACTGCTTGTATGAAGCTGGAAGAATATAGAACTGCTAAATCAGTCCTAG  Raphanus raphanistrum subsp. maritimus
FY454240       --> TACTGCTTGTATGAAGCTGGAAGAATATAGAACTGCTAAATCAGCCCTAG  Raphanus sativus cv GSK3-1
EX765131       --> -ACTGCTTGTATGAAGCTGGAAGAATATAGAACTGCTAAATCAGCCCTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY442828       --> TACTGCTTGTATGAAGCTGGAAGAATATAGAACTGCTAAATCAGCCCTAG  Raphanus sativus cv GSK3-1
EY916332       --> -ACTGCTTGTATGAAGCTGGAAGAATATAGAACTGCTAAATCAGCCCTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD974217       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550675       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY941541       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX889825       --> ..................................................  Raphanus sativus var. oleiformis

               301    -    351
UN22648        --> AGAAAGGCGCTTCTGTTGCACCTAATGAATCAAAGTTTAAGAAGATGTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768785       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893653       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FY440439       <-- ..................................................  Raphanus sativus cv GSK3-1
FD545490       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969739       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW728281       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY937359       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY941865       --> AGAAAGGCGCCTCTGTTGCACCTAATGAATCAAAGTTTAAGAAGATGTTA  Raphanus sativus cv Early Scarlet Globe
FD532157       --> AGAAAGGCGCTTCTGTTGCACCTAATGAATCAAAGTTTAACAAGATGTTA  Raphanus raphanistrum subsp. maritimus
FY454240       --> AGAAAGGCGCTTCTGTTGCACCTAATGAATCAAAGTTTAAGAAGATGTTA  Raphanus sativus cv GSK3-1
EX765131       --> AGAAAGGCGCTTCTGTTGCACCTAATGAATCAAAGTTTAACAAGATGTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY442828       --> AGAAAGGCGCTTCTGTTGCACCTAATGAATCAAAGTTTAAGAAGATGTTA  Raphanus sativus cv GSK3-1
EY916332       --> AGAAAGGCGCTTCTGTTGCACCTAATGAATCAAAGTTTAACAAGATGTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD974217       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550675       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY941541       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX889825       --> ..................................................  Raphanus sativus var. oleiformis

               351    -    401
UN22648        --> GATGAATGCAATCTCCGCATTGCAGAGGAAGAGAAAGATTTGGTTCAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768785       <-- ..................................................
EY893653       <-- ..................................................
FY440439       <-- ..................................................
FD545490       <-- ..................................................
FD969739       <-- ..................................................
EW728281       <-- ..................................................
EY937359       <-- ..................................................
EY941865       --> GATGAATGCAATCTCCGCATTGCAGAGGAAGAGAAAGATTTGGTTCAACA
FD532157       --> GATGAATGCAATCTCCGCATTGCAGAGGAAGAGAAAGATTTGGTTCAACA
FY454240       --> GATGAATGCAATCTCCGCATTGCAGAGGAAGAGAAAGATTTGATTCAACA
EX765131       --> GATGAATGCAATCTCCGCATTGCAGAGGAATAGAAAGATTTGGTTCAACA
FY442828       --> GATGAATGCAATCTCCGCATTGCAGAGGAAGAGAAAGATTTGATTCAACA
EY916332       --> GATGAATGCAATCTCCGCATTGCAGAGGAAGAGAAAGATTTGGTTCAACA
FD974217       --> ..............gCGCATTGCAGAGGAAGAGAAAGATTTGGTTCAACA
EV550675       --> ...........................GAAGAGAAAGATTTGGTTCAACA
EY941541       --> ..................................................
EX889825       --> ..................................................

               401    -    451
UN22648        --> GATGCCACCGACGACTTTGCCTTCAAGCTCTACAACACCACTAGCAACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768785       <-- ..................................................
EY893653       <-- ..................................................
FY440439       <-- ..................................................
FD545490       <-- ..................................................
FD969739       <-- ..................................................
EW728281       <-- ..................................................
EY937359       <-- ..................................................
EY941865       --> GATGCCACCGACGACTTTGCCTTCAAGCTCTACAACACCACTAGTAACCG
FD532157       --> GATGCCACCGACGACTTTGCCTTCAAGCTCTACAACACCACTAGCTACCG
FY454240       --> GATGCCACCGACGACTTTGCCTTCAAGCTCTACAACACCACTAGCAACCG
EX765131       --> GATGCCACCGACGACTTTGCCTTCAAGCTCTACAACACCACTAGCAACCG
FY442828       --> GATGCCACCGACGACTTTGCCTTCAAGCTCTACAACACCACTAGCAACCG
EY916332       --> GATGCCACCGACGACTTTGCCTTCAAGCTCTACAACACCACTAGCAACCG
FD974217       --> GATGCCACCGACGACTTTGCCTTCAAGCTCTACAACACCACTAGCAACCG
EV550675       --> GATGCCACCGACGACTTTGCCTTCAAGCTCTACAACACCACTAGCAACCG
EY941541       --> ..................................................
EX889825       --> ..................................................

               451    -    501
UN22648        --> CAGCTGATGCTCCTCCTGTTCCAAGTCCTGCAGCACCTGTCAAACCTATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768785       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893653       <-- .................................................g  Raphanus raphanistrum subsp. maritimus
FY440439       <-- ..................................................  Raphanus sativus cv GSK3-1
FD545490       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969739       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW728281       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY937359       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY941865       --> CAGCTGATGCTCCTCCTGTTCCAAGTCCTGCAGCACCTGTCAAACCTATG  Raphanus sativus cv Early Scarlet Globe
FD532157       --> CAGCTGATGCTCCTCCTGTTCCAAGTCCTGCAGCACCTGTCAAACCTATG  Raphanus raphanistrum subsp. maritimus
FY454240       --> CAGCTGATGCTCCTCCTGTTCCAAGTCCTGCAGCACCTGTCAAACCTATG  Raphanus sativus cv GSK3-1
EX765131       --> CAGCTGATGCTCCTCCTGTTCCAAGTCCTGCAGCACCTGCCAAACCTATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY442828       --> CAGCTGATGCTCCTCCTGTTCCAAGTCCTGCAGCACCTGTCAAACCTATG  Raphanus sativus cv GSK3-1
EY916332       --> CAGCTGATGCTCCTCCTGTTCCAAGTCCTGCAGCACCTGCCAAACCTATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD974217       --> AAGCTGATGCTCCTCCTGTTCCAAGTCCTGCAGCACCTGTCAAACCTATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550675       --> CAGCTGATGCTCCTCCTGTTCCAAGTCCTGCAGCACCTGCCAAACCTATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY941541       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX889825       --> ..................................................  Raphanus sativus var. oleiformis

               501    -    551
UN22648        --> TTCAGACACGAGTTCTATCAGAAGCCAGAAGAAGTGGTGGTGACGATTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768785       <-- TTCAGACACGAGTTCTATCAGAAGCCAGAAGAAGTGGTGGTGACGATTTT
EY893653       <-- tcCAGACACGAGTTCTATCAGAAGCCAGAAGAAGTGGTGGTGACGATTT-
FY440439       <-- ..................................................
FD545490       <-- ..................................................
FD969739       <-- ..................................................
EW728281       <-- ..................................................
EY937359       <-- ..................................................
EY941865       --> TTCAGACACGAGTTCTATCAGAAGCCAGAAGAAGTGGTGGTGACGATTTT
FD532157       --> TTCAGACACGAGTTCTATCAGAAGCCAGAAGAAGTGGTGGTGACGATTTT
FY454240       --> TTCAGACACGAGTTCTATCAGAAGCCAGAAGAAGTGGTGGTGACGATTTT
EX765131       --> TTCAGACACGAGTTCTATCAGAAGCCAGAAGAAGTGGTGGTGACGATTTT
FY442828       --> TTCAGACACGAGTTCTATCAGAAGCCAGAAGAAGTGGTGGTGACGATTTT
EY916332       --> CTCAGACACGAGTTCTATCAGAAGCCAGAAGAAGTGGTGGTGACGATTTT
FD974217       --> TTCAGACACGAGTTCTATCAGAGGCCAGAAGAAGTGGTGTTGACTATTTT
EV550675       --> TTCAGACACGAGTTCTATCAGAAGCCAGAAGAAGTGGTGGTGACGATTTT
EY941541       --> ..................................................
EX889825       --> ..................................................

               551    -    601
UN22648        --> CGCTAAAGGAATACCAAAGCAGAACGTAAATGTTGAGTTTGGTGACCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768785       <-- CGCTAAAGGAATACCAAAGCAGAACGTAAATGTTGAGTTTGGTGACCAGA
EY893653       <-- CGCTAAAGGAATACCAAAGCAGTACGTAAACGTTGAGTTTGGTGACCAGA
FY440439       <-- ..................................................
FD545490       <-- ..................................................
FD969739       <-- ..................................................
EW728281       <-- ..................................................
EY937359       <-- ..................................................
EY941865       --> CGCTAAAGGAATACCAAAGCAGAACGTAAATGTTGAATTTGGTGACCAGA
FD532157       --> CGCTAAAGGAATACCAAAGCAGAACGTAATTGTTGAGTTTGGTGACCAGA
FY454240       --> CGCTAAAGGAATACCAAAGCAGAACGTAAACGTTGAGTTTGGTGACCAGA
EX765131       --> CGCTAAAGGAATACCAAAGCAGAACGTAAATGTTGAGTTTGGTGACCAGA
FY442828       --> CGCTAAAGGAATACCAAAGCAGAACGTAAACGTTGAGTTTGGTGACCAGA
EY916332       --> CGCTAAAGGAATACCAAAGCAGAACGTAAATGTTGAGTTTGGTGACCAGA
FD974217       --> TGCTAAAGGAATACCAAAGCAGAACGTAAATGTTGAGTTTGGTGACCAGA
EV550675       --> CGCTAAAGGAATACCAAAGCAGAACGTAAATGTTGAGTTTGGTGACCAGA
EY941541       --> ..................................................
EX889825       --> ..................................................

               601    -    651
UN22648        --> TTCTAAGTGTTGGG-ATTGAAGTTGGTGGAGAGGAAGCTTATCATTTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768785       <-- TTCTAAGTGTTGGG-ATTGAAGTTGGTGGAGAGGAAGCTTATCATTTCCA
EY893653       <-- TTCTAAGTGTTGGT-ATTGAAGTTGGTGGAGAGGAAGCTTATCATTTCCA
FY440439       <-- ...........................................ATTTCCA
FD545490       <-- ..................................................
FD969739       <-- ..................................................
EW728281       <-- ..................................................
EY937359       <-- ..................................................
EY941865       --> TTCTAAGTGTGGGG-ATTGAAGTTGCTGGAGAGGAAGCTTATCATTTCCA
FD532157       --> TTCTAAGTGTTGGG-ATTGAAGTTGGTGGAGAGGAAGCTTATCATTTCCA
FY454240       --> TTCTAAGTGTTGGT-ATTGAAGTTGGTGGAGAGGAAGCTTATCATTTCCA
EX765131       --> TTCTAAGTGTTGGGGATTGAAGTTGGTGGAGAGGAAGCTTATCATTTCCA
FY442828       --> TTCTAAGTGTTGGT-ATTGAAGTTGGTGGAGAGGAAGCTTATCATTTCCA
EY916332       --> TTCTAAGTGTTGGG-ATTGAAGTTGGTGGAGAGGAAGCTTATCATTTCCA
FD974217       --> TTCTGAGTGTTGTG-ATTGAAGTTGCTGGAGAGGAAGCTTATCATTTCCA
EV550675       --> TTCTAAGTGTTGGG-ATTGAAGTTGGTGGAGAGGAAGCTTATCATTTCCA
EY941541       --> ......GTGTTGGG-ATTGAAGTTGCTGGAGAGGAAGCTTATCATTTCCA
EX889825       --> ..................................................

               651    -    701
UN22648        --> GCCAAGATTGTTCGGGAAGATAATACCAGAGAAGTGCAGATATGAAGTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768785       <-- GCCAAGATTGTTCGGGAAGATAATACCAGAGAAGTGCAGATATGAAGTAT
EY893653       <-- GCCAAGATTGTTCGGGAAGATAATACCAGAGAAGTGCAGATATGAAGTAT
FY440439       <-- GCCAAGATTGTTCGGGAAGATAATACCAGAGAAGTGCAGATATGAAGTAT
FD545490       <-- ..................................................
FD969739       <-- ..................................................
EW728281       <-- ..................................................
EY937359       <-- ..................................................
EY941865       --> GCCAAGATTGTTCcgg..................................
FD532157       --> GCCAAGATTGTTCGGGAAGATAATACCAGAGAAGTGCAGATATGAAGTAT
FY454240       --> GCCAAGATTGTTCGGGAAGATAATACCAGAGAAGTGCAGATATGAAGTAT
EX765131       --> GCCAAGATTGTTCGGGAAGATAATACCAGAGAAGTGCAGATATGAAGTAT
FY442828       --> GCCAAGATTGTTCGGGAAGATAATACCAGAGAAGTGCAGATATGAAGTAT
EY916332       --> GCCAAGATTGTTCGGGAAGATAATACCAGAGAAGTGCAGATATGAAGTAT
FD974217       --> GCCAAGATTGTTCGGGAAGATAATACCAGAGAAGTGCAGATATGAAGTAT
EV550675       --> GCCAAGATTGTTCGGGAAGATAATGCCAGAGAAGTGCAGATATGAAGTAT
EY941541       --> GCCAAGATTGTTCCGGAAGATAATACCAGAGAAGTGTAGATATGAAGTAT
EX889825       --> ..................................................

               701    -    751
UN22648        --> TGTCAACCAAAGTTGAGATTCGTCTCGCAAAAGCAGAGATGATCACTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768785       <-- TGTCAACCAAAGTTGAGATTCGTCTGGCAAAAGCAGAGATGATCACTTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893653       <-- TGTCAACCAAAGTTGAGATTCGTCTCGCAAAAGCAGAGATTATCACTTGG  Raphanus raphanistrum subsp. maritimus
FY440439       <-- TGTCAACCAAAGTTGAGATTCGTCTCGCAAAAGCAGAGATTATCACTTGG  Raphanus sativus cv GSK3-1
FD545490       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969739       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW728281       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY937359       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY941865       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD532157       --> TGTCAACCAAAGTTGAGATTCGTCTCGCAAAAGCAGAGATCATCACTTGG  Raphanus raphanistrum subsp. maritimus
FY454240       --> TGTCAACCAAAGTTGAGATTCGTCTCGCAAAAGCAGAGATTATCACTTGG  Raphanus sativus cv GSK3-1
EX765131       --> TGTCAACCAAAGTTGAGATTCGTCTGGCAAA-GCAGAGATGATCACTTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY442828       --> TGTCAACCAAAGTTGAGATTCGTCTCGCAAAAGCAGAGATTATCACTTGG  Raphanus sativus cv GSK3-1
EY916332       --> TGTCAACCAAAGTTGAGATTCGTCTGGCAAAAGCAGAGATGATCACTTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD974217       --> TGTCAACCAAAGTTGAGATTCGTCTCGCAAAAGCAGAGATCATCACTTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550675       --> TGTCAACCAAAGTTGAGATTCGTCTGGCAAAAGCAGAGATGATCACTTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY941541       --> TGTCAACCAAAGTTGAGATTCGTCTCGCAAAAGCAGAGATGATCACTTGG  Raphanus sativus cv Early Scarlet Globe
EX889825       --> ..................................................  Raphanus sativus var. oleiformis

               751    -    801
UN22648        --> GCCTCCCTTGAATATAGCAAAGGGCAAGCTCTTCTGCCTAAACCCAATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768785       <-- GCCTCCCTTGAATATAGCAAAGGGCAAGCTTTTCTACCTAAACCCAATGT
EY893653       <-- GCCTCCCTTGAATATAGCAAAGGGCAAGCTCTTCTGCCTAAACCCAATGT
FY440439       <-- GCCTCCCTTGAATATAGCAAAGGGCAAGCTCTTCTGCCTAAACCCAATGT
FD545490       <-- ..............................CTTCTGCCTAAACCCAATGT
FD969739       <-- ...............................tttTGCCTAAACCCAATGT
EW728281       <-- ................................ttctCCTAAACCCAATGT
EY937359       <-- ..................................................
EY941865       --> ..................................................
FD532157       --> GCCTCCCTTGA-TATAGCAAAGGGCAAGCTCTT.................
FY454240       --> GCCTCCCTTGAATATAGCAAAGGGCAAGCTCTTCTGCCTAAACCCAATGT
EX765131       --> GCCTCCCTTGA-TATAGCAAAGGGCAAGCTCTT.................
FY442828       --> GCCTCCCTTGAATATAGCAAAGGGCAAGCTCTTCTGCCTAAACCCAATGT
EY916332       --> GCCTCTCTTGAATATAGCAAAGGGCAAGCTCTTCTACCTAAACCCAATGT
FD974217       --> GCCTCCCTTGAATATAGCAAAGGGCAAGCTCTTCTGCCTAAACCCAATGT
EV550675       --> GCCTCCCTTGAATATAGCAAAGGGCAAGCTCTTCTACCTAAACCCAATGT
EY941541       --> GCCTCCCTTGAATATAGCAAAGGGCAAGCTCTTCTGCCTAAACCCAATGT
EX889825       --> ..................................................

               801    -    851
UN22648        --> TGCATCAGCGGTTTCACAGAGGCCAGTGTACCCATCTTCCAAGCCTGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768785       <-- TGCATCAGCGGTTTCACAGAGGCCAGTGTACCCATCTTCCAAGCCTGGAA
EY893653       <-- TGCATCAGCGGTTTCACAGAGGCCAGTGTACCCATCTTCCAAGCCTGGAA
FY440439       <-- TGCATCAGCGGTTTCACAGAGGCCAGTGTACCCATCTTCCAAGCCTGGAA
FD545490       <-- TGCATCAGCGGTTTCACAGAGGCCAGTGTACCCATCTTCCAAGCCTGGAA
FD969739       <-- TGCATCAGCGGTTTCACAGAGGCCAGTGTACCCTTTTTCCAAGCCTGGAA
EW728281       <-- TGCATCAGCGGTTTCACAGAGGCCAGTGTACCCATTTTCCAAGCCTGGAA
EY937359       <-- ..................................................
EY941865       --> ..................................................
FD532157       --> ..................................................
FY454240       --> TGCATCAGCGGTTTCACAGAGGCCAGTGTACCCATCTTCCAAGCCTGGAA
EX765131       --> ..................................................
FY442828       --> TGCATCAGCGGTTTCACAGAGGCCAGTGTACCCATCTTCCAAGCCTGGAA
EY916332       --> TGCA..............................................
FD974217       --> TGCATCAGCGGTTTCACAGAGGCCAGTGTACCCATCTTCCAAGCCTGGAA
EV550675       --> TGCATCAGCGGTTTCACAGAGGCCAGTGTACCCATCTTCCAAGCCTGGAA
EY941541       --> TGCATCAGCGGTTTCACAGAGGCCAGTGTACCCATCTTCCAAGCCTGGAA
EX889825       --> ..................................................

               851    -    901
UN22648        --> AAGACTGGGACAAGTTGGAAGCTGAAGTGAAGAAGCAGGAGAAGGATGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768785       <-- AAGACTGGGACAAGTTGGAAGCTGAAGTGAAGAAGCAGGAGAAGGATGAG
EY893653       <-- AAGACTGGGACAAGTTGGAAGCTGAAGTGAAGAAGCAGGAGAAGGATGAG
FY440439       <-- AAGACTGGGACAAGTTGGAAGCTGAAGTGAAGAAGCAGGAGAAGGATGAG
FD545490       <-- AAGACTGGGACAAGTTGGAAGCTGAAGTGAAGAAACAGGAGAAGGATGAG
FD969739       <-- AAGACTGGGACAAGTTGGAAGCTGAAGTGAAGAAGCAGGAGAAGGATGAG
EW728281       <-- AAGACTGGGACAAGTTGGAAGCTGAAGTGAAGAAGCAGGAGAAGGATGAG
EY937359       <-- .............................AAGAAGCAGGAGAAGGATGAG
EY941865       --> ..................................................
FD532157       --> ..................................................
FY454240       --> AAGACTGGGACAAGTTGGAAGCTGAAGT......................
EX765131       --> ..................................................
FY442828       --> AAGACTGGGACAAGTTGGAAGCTGAAGTGAAGAAGCAGGAGAAGGATGAG
EY916332       --> ..................................................
FD974217       --> AAGACTGGGACAAGTTGGAAGCTGAAGTGAAGAA................
EV550675       --> AAGACTGGGACAAGTTGGAAGCTGAAGTGAAGAAGCAGGAGAAGGATGAG
EY941541       --> AAGACTGGGACAAGTTGGAAGCTGAAGTGAAGAAGCAGGAGAAGGATGAG
EX889825       --> .............................gtGAAGCAGGAGAAGGATGAG

               901    -    951
UN22648        --> AAGCTAGATGGAGATGCAGCAATGAACAAGTTTTTCAGCGATATATACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768785       <-- AAGCTAGATGGAGATGCAGCAATGAACAAGTTTTTCAGCGATATATACCA
EY893653       <-- AAGCTAGATGGAGATGCAGCAATGAACAAGTTTTTCAGCGATATATACCA
FY440439       <-- AAGCTAGATGGAGATGCAGCAATGAACAAGTTTTTCAGCGATATATACCA
FD545490       <-- AAGCTAGATGGAGATGCAGCAATGAACAAGTTTTTCAGCGATATATACCA
FD969739       <-- AAGCTAGATGGAGATGCAGCAATGAACAAGTTTTTCAGCGATATATACCA
EW728281       <-- AAGCTAGATCGAGATGCAGCAATGAACAAGTTTTTCAGCGATATATACCA
EY937359       <-- AAGCTAGATGGAGATGCAGCAATGAACAAGTTTTTCAGCGATATATACCA
EY941865       --> ..................................................
FD532157       --> ..................................................
FY454240       --> ..................................................
EX765131       --> ..................................................
FY442828       --> AAGCTAGATGG.......................................
EY916332       --> ..................................................
FD974217       --> ..................................................
EV550675       --> AAGCTAGATGGAGATGCAGCAATGAACAAGTTTTTCAACGATATATACCA
EY941541       --> AAGCTAGATGGAGATGCAGTAATGAACAAGTTTTTCAGCGATATATACCA
EX889825       --> AAGCTAGATGGAGATGCAGCAATGAACAAGTTTTTCAGCGATATATACCA

               951    -   1001
UN22648        --> GAGTGCTGATGAGGACATGAGGCGAGCCATGAACAAATCATTTGCAGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768785       <-- GAGTGCTGATGAGGACATGAGGCGAGCCATGAACAAATCATTTGCAGAGT
EY893653       <-- GAGTGCTGATGAGGATATGAGGCGAGCCATGAACAAATCATTTGCAGAGT
FY440439       <-- GAGTGCTGATGAGGATATGAGGCGAGCCATGAACAAATCATTTGCAGAGT
FD545490       <-- GAGTGCTGATGAGGACATGAGGCGAGCCATGAACAAATCATTTGCAGAGT
FD969739       <-- GAGTGCTGATGAGGACATGAGGCGAGCCATGAACAAATCATTTGCAGAGT
EW728281       <-- GAGTGCTGATGAGGACATGAGGCGAGCCATGAACAAATCATTTGCAGAGT
EY937359       <-- GAGTGCTGATGAGGACATGAGGCGAGCCATGAACAAATCATTTGCAGAGT
EY941865       --> ..................................................
FD532157       --> ..................................................
FY454240       --> ..................................................
EX765131       --> ..................................................
FY442828       --> ..................................................
EY916332       --> ..................................................
FD974217       --> ..................................................
EV550675       --> GAGTGCTGATGAGGACATGAGGCGAGCCATGAACAAATCATTTGCAGAGT
EY941541       --> GAGTGCTGATGAGGACATGAGGCGAGCCATGAACAAATCATTTGCAGAGT
EX889825       --> GAGTGCTGATGAGGACATGAGGCGAGCCATGAACAAATCATTTGCAGAGT

               1001   -   1051
UN22648        --> CTAATGGGACAGTGCTGTCTACAAACTGGAAAGAGGTTGGGACTAAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768785       <-- CTAATGGGACAGTGCTGTCTACAAACTGGAAAGAGGTTGGGACTAAGAAA
EY893653       <-- CTAATGGGACAGTGCTGTCTACAAACTGGAAAGAGGTTGGGACTAAGAAA
FY440439       <-- CTAATGGGACAGTGCTGTCTACAAACTGGAAAGAGGTTGGGACTAAGAAA
FD545490       <-- TTAATGGGACAGTGCTGTCTACAAACTGGAAAGAGGTTGGGACTAAGAAA
FD969739       <-- TTAATGGGACAGTGC...................................
EW728281       <-- TTAATGGGACAGTGCTGTTTACAAACTGGAAAGAGGTTGGGACTAAGAAA
EY937359       <-- CTAATGGGACAGTGCTGTCTACAAACTGGAAAGAGGTTGGGACTAAGAAA
EY941865       --> ..................................................
FD532157       --> ..................................................
FY454240       --> ..................................................
EX765131       --> ..................................................
FY442828       --> ..................................................
EY916332       --> ..................................................
FD974217       --> ..................................................
EV550675       --> CTAATGGGACAGTGCTGTCTACAAACTGGAAAGAGGTTGGGACTAAGAAA
EY941541       --> CTAATGGGACAGTGCTGTCTACAAACTGGAAAGAGGTTGGGACTAAGAAA
EX889825       --> CTAATGGGACAGTGCTGTCTACAAACTGGAAAGAGGTTGGGACTAAGAAA

               1051   -   1101
UN22648        --> GTGGAGAGCACTCCCCCCGATGGTATGGAGCTCAAGAAGTGGGAATATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768785       <-- GTGGAGAGCACTCCCCCCGATGGTATGGAGCTCAAGAAGTGGGAATATTG
EY893653       <-- GTGGAGAGCACTCCCCCAGATGGTATGGAGCTTAAGAAGTGGGAATATTG
FY440439       <-- GTGGAGAGCACTCCCCCAGATGGTATGGAGCTTAAGAAGTGGGAATATTG
FD545490       <-- GTGGAGAGCACCCCCCCAGATGGTATGGAGCTCAAGAAGTGGGAATATTG
FD969739       <-- ..................................................
EW728281       <-- GTGGAGAG..........................................
EY937359       <-- GTGGAGAGCACTCCCCCCGATGGTATGGAGCTCAAGAAGTGGGAATATTG
EY941865       --> ..................................................
FD532157       --> ..................................................
FY454240       --> ..................................................
EX765131       --> ..................................................
FY442828       --> ..................................................
EY916332       --> ..................................................
FD974217       --> ..................................................
EV550675       --> GTGGAGAGCACTCCCCCCGATGGTATGGAGCTCAAGAAGTGGGAATATTG
EY941541       --> GTGGAGAGCACTCCCCCCGATGGTATGGAGCTCAAGAAGTGGGAATATTG
EX889825       --> GTGGAGAGCACTCCCCCAGATGGTATGGAGCTCAAGAAGTGGGAATATTG

               1101   -   1151
UN22648        --> ATTTTCTTAAAATCCTCTTTTCTGGCTTTGTCAAAAATTCGGACAAAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768785       <-- ATTTTCTTAAAATCCTCTTTTCTGGCTTTGTCAAAAATTCGGACAAA-TA
EY893653       <-- ATCTTCTTAAAATCCTCTTTTCTGCCTTTGTCAAAAGTTCGGACAAAATA
FY440439       <-- ATCTTCTTAAAATCCTCTTTTCTGCCTTTGTCAAAAGTTCGGACAAAATA
FD545490       <-- ATCTTCTTAAAATCCTCTTTTCTGGCTTTGTCAAAAATTCGGACAAAATA
FD969739       <-- ..................................................
EW728281       <-- ..................................................
EY937359       <-- ATTTTCTTAAAATCCTCTTTTCTGGCTTTGTCAAAAATTCGGACAAA-TA
EY941865       --> ..................................................
FD532157       --> ..................................................
FY454240       --> ..................................................
EX765131       --> ..................................................
FY442828       --> ..................................................
EY916332       --> ..................................................
FD974217       --> ..................................................
EV550675       --> ATTTTCTTAAAtcc....................................
EY941541       --> ATTTTCTTAAAATCCTCTTTTCTGGCTTTGTCAAAAATTCGGACAAA-TA
EX889825       --> ATCTTCTTAAAATCCTCTTTTCTGGCTTTGTCAAAAATTCGGACAAAATA

               1151   -   1201
UN22648        --> TTTGAACTTGAAAGTTTCTTTTGGTTTTTGCTATAATTTGTCTCTTCATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768785       <-- TTTGAACTTGAAAGTTTCTTTTGGTTTTTGCTATAATTTGTCTCTTCATT
EY893653       <-- TTTAAACTTCAAAGTTTCTTTTGGTTTTTGCTATAACTTGTCTCTTCATT
FY440439       <-- TTTAAACTTCAAAGTTTCTTTTGGTTTTTGCTATAACTTGTCTCTTCATT
FD545490       <-- TTTGAACTTCGAAATTTCTTTTGGTTTTTGCTATAATTTGTCTCTTCATT
FD969739       <-- ..................................................
EW728281       <-- ..................................................
EY937359       <-- TTTGAACTTGAAAGTTTCTTTTGGTTTTTGCTATAATTTGTCTCTTCATT
EY941865       --> ..................................................
FD532157       --> ..................................................
FY454240       --> ..................................................
EX765131       --> ..................................................
FY442828       --> ..................................................
EY916332       --> ..................................................
FD974217       --> ..................................................
EV550675       --> ..................................................
EY941541       --> TTTGAACTTGAAGGTTTCTTTTGGTTTTTGCTATAATTTGTCTCTTCATT
EX889825       --> TTTGAACTTATAAGTTTCTTTTGGTTTTTGCTATAATTTGTCTCTTTATT

               1201   -   1251
UN22648        --> CTTGCGTTATGGTCTCATTGTATTAGAAAAGCTCGGAAGGTTGTCATTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768785       <-- CTTGCGTTATGGTCTCATTGTATTAGAAAAGCTCGGAAGGTTGTCATTTA
EY893653       <-- CTTGCGTTGTGGTCTCATTGTATTAGAAAAGCTCGGAAGGTTGTCATTTA
FY440439       <-- CTTGCGTTGGGGTCTCATTGTATTAGAAAAGCTCGGAAGGTTGTCATTTA
FD545490       <-- CTTGCGTTATGGTCTCATTGTATTAGAAAAGCTCGCAAGGTTGTCATTTt
FD969739       <-- ..................................................
EW728281       <-- ..................................................
EY937359       <-- CTTGCGTTATGGTCTCATTGTATTAGAAAAGCTCGGAAGGTTGTCATTTA
EY941865       --> ..................................................
FD532157       --> ..................................................
FY454240       --> ..................................................
EX765131       --> ..................................................
FY442828       --> ..................................................
EY916332       --> ..................................................
FD974217       --> ..................................................
EV550675       --> ..................................................
EY941541       --> CTTGCGTTATGGTCTCATTGTATTAGAAA.....................
EX889825       --> CTTGCGTTATGGTCTCATTGTATTAGAAAAGCTCGGAAGGTTGTCATTTA

               1251   -   1301
UN22648        --> CTTTTT---TTTT-TTTT-----C-AA-CAGATTTTCATGACATTCTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768785       <-- CTTTTT---TTTT-T--T-----C-AA-CAGATTTTCATGAC........
EY893653       <-- CTTTTT---TTTT-TTTTTTTTCCAAA-CAGATTTTCATGACATTCTTGC
FY440439       <-- CTTTTT---TTTT-TTTC-----C-AAACAGATTTTCATGACATTCTTGC
FD545490       <-- ..................................................
FD969739       <-- ..................................................
EW728281       <-- ..................................................
EY937359       <-- CTTTTT---TTTT-TTTT-----C-AA-CAGATTTTCATGAC........
EY941865       --> ..................................................
FD532157       --> ..................................................
FY454240       --> ..................................................
EX765131       --> ..................................................
FY442828       --> ..................................................
EY916332       --> ..................................................
FD974217       --> ..................................................
EV550675       --> ..................................................
EY941541       --> ..................................................
EX889825       --> CTTTTTCTTTTTTATTTT-----C-AA-CAGATTTTCATGACATTCTTGC

               1301   -   1351
UN22648        --> ATTGTGATCTTAAGTTAGATGTATAAACCCAATTTTCGTTTGAAAAATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768785       <-- ..................................................
EY893653       <-- ATTGTGATCTTAAGTTAGATGTATAAACCCAATTTTCGTTTGAAAAATGT
FY440439       <-- ATTGTGATCTTAAGTTAGATGTATAAACCCAATTTTCGTTTG........
FD545490       <-- ..................................................
FD969739       <-- ..................................................
EW728281       <-- ..................................................
EY937359       <-- ..................................................
EY941865       --> ..................................................
FD532157       --> ..................................................
FY454240       --> ..................................................
EX765131       --> ..................................................
FY442828       --> ..................................................
EY916332       --> ..................................................
FD974217       --> ..................................................
EV550675       --> ..................................................
EY941541       --> ..................................................
EX889825       --> ATTGTGATCTTAAGTTAGATGTATAAAC......................

               1351   -   1401
UN22648        --> TGTCACC
                   ~~~~~~~
EX768785       <-- .......
EY893653       <-- TGTCACC
FY440439       <-- .......
FD545490       <-- .......
FD969739       <-- .......
EW728281       <-- .......
EY937359       <-- .......
EY941865       --> .......
FD532157       --> .......
FY454240       --> .......
EX765131       --> .......
FY442828       --> .......
EY916332       --> .......
FD974217       --> .......
EV550675       --> .......
EY941541       --> .......
EX889825       --> .......