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Alignment for radish unigene UN22651

               1      -     51
UN22651        --> GGATTGATGGTGGACGCGACCACGGAGAACAATTACTAATTCCTCTTACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD536982       <-- ..................................................
FD984549       <-- ..................................................
FD942038       <-- ..................................................
EV571480       <-- ..................................................
FD539990       <-- ..................................................
EY918922       <-- ..................................................
EV544438       <-- ..................................................
FD951954       <-- ..................................................
FD953134       <-- ..................................................
FD553148       <-- ..................................................
FD969408       <-- ..................................................
EY923081       --> GGATTGATGGTGGACGCGACCACAGAGAACAATTACTAATTCCTCTTACG
FD988682       --> .............ggGCGACCACGGAGAACAATTACTAATTCCTCTTACG
EX746162       --> ..................................................
FD540484       --> ..................................................
FY439973       --> ..................................................
FD973782       --> ..................................................
EV569858       --> ..................................................
EW715737       --> ..................................................
EW725623       --> ..................................................
EX890004       --> ..................................................
FD957431       --> ..................................................
EV548835       --> ..................................................
FD945817       --> ..................................................
FD989263       --> ..................................................
FD544358       --> ..................................................
FD955993       --> ..................................................
FY448168       --> ..................................................
EV566321       --> ..................................................
FY436635       --> ..................................................
FY434013       --> ..................................................
FY438915       --> ..................................................
FY443877       --> ..................................................
FY442164       --> ..................................................
FY443319       --> ..................................................
FY431408       --> ..................................................
FD973934       --> ..................................................
FY440782       --> ..................................................
FD556936       --> ..................................................
FD971112       --> ..................................................
FY429134       --> ..................................................

               51     -    101
UN22651        --> TCCACCACCCTTTCTTCAAGTCTTGGCTTCTTCTTCTTCTCCGCCTCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD536982       <-- ......................gggggTTCTTCTTCTTCTCCGCCTCTCC
FD984549       <-- ..............................TTCTTCTTCTCCGCCTCTCC
FD942038       <-- .................................................g
EV571480       <-- ..................................................
FD539990       <-- ..................................................
EY918922       <-- ..................................................
EV544438       <-- ..................................................
FD951954       <-- ..................................................
FD953134       <-- ..................................................
FD553148       <-- ..................................................
FD969408       <-- ..................................................
EY923081       --> TCCACCACCCTTTCTTCAAGTCTTGGCTTCTTCTTCTTCTCCGCCTCTCC
FD988682       --> TCCACCACCCTTTCTTCAAGTCTTGGCTTCTTCTTCTTCTCCGCCTCTCC
EX746162       --> .......................gGGCTTCTTCTTCTTCTCCGCCTCTCC
FD540484       --> ......................gggggTTCTTCTTCTTCTCCGCCTCTCC
FY439973       --> .......................................TCCGCCTCTCC
FD973782       --> ......................................ggCCGCCTCTCC
EV569858       --> ........................................ggGCCTCTCC
EW715737       --> ........................................ggGCCTCTCC
EW725623       --> ..........................................GCCTCTCC
EX890004       --> ........................................ggGCCTCTCC
FD957431       --> ........................................ggGCCTCTCC
EV548835       --> .................................................g
FD945817       --> .................................................g
FD989263       --> ..................................................
FD544358       --> ..................................................
FD955993       --> ..................................................
FY448168       --> ..................................................
EV566321       --> ..................................................
FY436635       --> ..................................................
FY434013       --> ..................................................
FY438915       --> ..................................................
FY443877       --> ..................................................
FY442164       --> ..................................................
FY443319       --> ..................................................
FY431408       --> ..................................................
FD973934       --> ..................................................
FY440782       --> ..................................................
FD556936       --> ..................................................
FD971112       --> ..................................................
FY429134       --> ..................................................

               101    -    151
UN22651        --> TAATTACGCGAAGAAGAAGGCGAAAACCTCGCCAAGTCTGATACACGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD536982       <-- TAATTACGCGAAGAAGAAGGCGAAAACCTCGCCAAGTCTGATACACGCAA
FD984549       <-- TAATTACGCGAAGAAGAAGGCGAAAACCTCGCCAAGTCTGATACACGCAA
FD942038       <-- gAATTACGCGAAGAAGAAGGCGAAAACCTCGCCAAGTCTGATACACGCAA
EV571480       <-- ...................ggGAAAACCTCGCCAAGTTTGATACACGCAA
FD539990       <-- ..................................................
EY918922       <-- ..................................................
EV544438       <-- ..................................................
FD951954       <-- ..................................................
FD953134       <-- ..................................................
FD553148       <-- ..................................................
FD969408       <-- ..................................................
EY923081       --> TAATTACGCGAAGAAGAAGGCGAAAACCTCGCCAAGTCTGATACACGCAA
FD988682       --> TAATTACGCGAAGAAGAAGGCGAAAACCTCGCCAAGTCTGATACACGCAA
EX746162       --> TAATTACGCGAAGAAGAAGGCGAAAACCTCGCCAAGTCTGATACACGCAA
FD540484       --> TAATTACGCGAAGAAGAAGGCGAAAACCTCGCCAAGTCTGATACACGCAA
FY439973       --> TAATTACGCGAAGAAGAAGGCGAAAACCTCGCCAAGTCTGATACACGCAA
FD973782       --> TAATTACGCGAAGAAGAAGGCGAAAACCTCGCCAAGTCTGATACACGCAA
EV569858       --> TAATTGCGCGAAGAAGAAGGCGAAAACCTCGCCAAGTCTGATACACGCAA
EW715737       --> TAATTACGCGAAGAAGAAGGCGAAAACCTCGCCAAGTCTGATACACGCAA
EW725623       --> TAATTACGCGAAGAAGAAGGCGAAAACCTCGCCAAGTCTGATACACGCAA
EX890004       --> TAATTACGCGAAGAAGAAGGCGAAAACCTCGCCAAGTCTGATACACGCAA
FD957431       --> TAATTACGCGAAGAAGAAGGCGAAAACCTCGCCAAGTCTGATACACGCAA
EV548835       --> gAATTACGCGAAGAAGAAGGCGAAAACCTCGCCAAGTCTGATACACGCAA
FD945817       --> gAATTACGCGAAGAAGAAGGCGAAAACCTCGCCAAGTCTGATACACGCAA
FD989263       --> gAATTACGCGAAGAAGAAGGCGAAAACCTCGCCAAGTCTGATACACGCAA
FD544358       --> ...ggACGCGAAGAAGAAGGCGAAAACCTCGCCAAGTCTGATACACGCAA
FD955993       --> ...ggACGCGAAGAAGAAGGCGAAAACCTCGCCAAGACTGATACACGCAA
FY448168       --> ...................GCGAAAACCTCGCCAAGTCTGATACACGCAA
EV566321       --> ...................ggGAAAACCTCGCCAAGTCTGATACACGCAA
FY436635       --> .....................GAAAACCTCGCCAAGTCTGATACACGCAA
FY434013       --> ................................ccAGTCTGATACACGCAA
FY438915       --> ....................................TCTGATACACGCAA
FY443877       --> ....................................TCTGATACACGCAA
FY442164       --> .......................................GATACACGCAA
FY443319       --> ............................................ACGCAA
FY431408       --> ..................................................
FD973934       --> ..................................................
FY440782       --> ..................................................
FD556936       --> ..................................................
FD971112       --> ..................................................
FY429134       --> ..................................................

               151    -    201
UN22651        --> AACCAAA-GAGATCGCATCGTAGGTTTTGGATATGGCGTCGAAGCGGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD536982       <-- AACCGAA-GAGATCGCATCGTAGGTTTTGGATATGGCGTCGAAGCGGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD984549       <-- AACCAAA-GAGATCGCATCGTAGGTTTTGGATATGGCGTCGAAGCGGATC  Raphanus raphanistrum subsp. landra
FD942038       <-- AACCAAA-GAGATCGCATCGTAGGTTTTGGATATGGCGTCGAAGCGGATC  Raphanus sativus cv Early Scarlet Globe
EV571480       <-- AACCAAA-GAGATCGCATCGTAGGTTTTGGATATGGCGTCGAAGCGGATC  Raphanus raphanistrum subsp. landra
FD539990       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY918922       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV544438       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD951954       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD953134       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD553148       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD969408       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY923081       --> AACCAAA-GAGATCGCATCGTAGGTTTTGGATATGGCGTCGAAGCGGATC  Raphanus raphanistrum subsp. landra
FD988682       --> AACCAAA-GAGATCGCATCGTAGGTTTTGGATATGGCGTCGAAGCGGATC  Raphanus raphanistrum subsp. landra
EX746162       --> AACCAAA-GAGATCGTATCGTAGGTTTTGGATATGGCCTCGAAGCGGATC  Raphanus raphanistrum subsp. maritimus
FD540484       --> AACCGAA-GAGATCGCATCGTAGGTTTTGGATATGGCGTCGAAGCGGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FY439973       --> A-CCAAA-GAGATCGCATCGTAGGTTTTGGATATGGCGTCGAAGCGGATC  Raphanus sativus cv GSK3-1
FD973782       --> AACCGAA-GAGATCGCATCGTAGGTTTTGGATATGGCGTCGAA.......  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569858       --> AACCAAA-GAGATCGCATCGTAGGTTTTGGATATGGCGTCGAAGCGGATC  Raphanus raphanistrum subsp. landra
EW715737       --> AACCAAA-GAGATCGTATCGTAGGTTTTGGATATGGCGTCGAAGCGGATC  Raphanus sativus var. oleiformis
EW725623       --> AACCAAA-GAGATCGCATCGTAGGTTTTGGATATGGCGTCGAAGCGGATC  Raphanus sativus cv Early Scarlet Globe
EX890004       --> AACCAAA-GAGATCGCATCGTAGGTTTTGGATATGGCGTCGAAGCGGATC  Raphanus sativus var. oleiformis
FD957431       --> AACCAAA-GAGATCGTATCGTAGGTTTTGGATATGGCGTCGAAGCGGATC  Raphanus sativus cv Rat-Tail Radish #3870
EV548835       --> AACCAAAAGGGATCGTATCGTAGGTTTTGGATATGGCGTCGAAGCGGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD945817       --> AACCAAA-GAGATCGCATCGTAGGTTTTGGATATGGCGTCGAAGCGGATC  Raphanus sativus cv Early Scarlet Globe
FD989263       --> AACCAAA-GAGATCGCATCGTAGGTTTTGGATATGGCGTCGAAGCGGATC  Raphanus raphanistrum subsp. landra
FD544358       --> AACCGAA-GAGATCGCATCGTAGGTTTTGGATATGGCGTCGAAGCGGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955993       --> AACCAAAAGAGATCGTATCGTAGGTTTTGGATATGGCGTCGAAGCGGATC  Raphanus sativus cv Rat-Tail Radish #3870
FY448168       --> A-CCAAA-GAGATCGCATCGTAGGTTTTGGATATGGCGTCGAAGCGGATC  Raphanus sativus cv GSK3-1
EV566321       --> AACCAAA-GAGATCGCATCGTAGGTTTTGGATATGGCGTCGAAGCGGATC  Raphanus raphanistrum subsp. landra
FY436635       --> A-CCAAA-GA--TCGCATCGTAGGTTTTGGATATGGCGTCGAAGCGGATC  Raphanus sativus cv GSK3-1
FY434013       --> ---CAAA-GAGATCGCATCGTAGGTTTTGGATATGGCGTCGAAGCGGATC  Raphanus sativus cv GSK3-1
FY438915       --> A--CAAA-GAGATCGCATCGTAGGTTTTGGATATGGCGTCGAAGCGGATC  Raphanus sativus cv GSK3-1
FY443877       --> A-CCAAA-GAGATCGCATCGTAGGTTTTGGATATGGCGTCGAAGCGGATC  Raphanus sativus cv GSK3-1
FY442164       --> A--CAAA-GAGATCGCATCGTAGGTTTTGGATATGGCGTCGAAGCGGATC  Raphanus sativus cv GSK3-1
FY443319       --> A-CC-AA-GAGATCGCATCGTAGGTTTTGGATATGGCGTCGAAGCGGATC  Raphanus sativus cv GSK3-1
FY431408       --> .....AA-GAGATCGCATCGTAGGTTTTGGATATGGCGTCGAAGCGGATC  Raphanus sativus cv GSK3-1
FD973934       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY440782       --> ..................................................  Raphanus sativus cv GSK3-1
FD556936       --> ..................................................  Raphanus raphanistrum subsp. landra
FD971112       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY429134       --> ..................................................  Raphanus sativus cv GSK3-1

               201    -    251
UN22651        --> TTGAAGGAACTCAAGGATCTGCAGAAGGATCCACCCACCTCATGTAGCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD536982       <-- TTGAAGGAACTCAAGGATCTTCAGAAGGATCCACCCACCTCATGTAGCGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD984549       <-- TTGAAGGAACTCAAGGATCTTCAGAAGGATCCACCCACCTCTTGTAGCGC  Raphanus raphanistrum subsp. landra
FD942038       <-- TTGAAGGAACTCAAGGATCTTCAGAAGGATCCACCCACCTCTTGTAGCGC  Raphanus sativus cv Early Scarlet Globe
EV571480       <-- TTGAAGGAACTCAAGGATCTTCAGAAGGATCCACCCACCTCTTGTAGCGC  Raphanus raphanistrum subsp. landra
FD539990       <-- ......GAACTCAAGGATCTTCAGAAGGATCCACCCACCTCATGTAGCGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY918922       <-- ....................tCAGAAGGATCCACCCACCTCTTGTAGCGC  Raphanus raphanistrum subsp. landra
EV544438       <-- ........................AAGGATCCACCCACCTCATGTAGCGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD951954       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD953134       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD553148       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD969408       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY923081       --> TTGAAGGAACTCAAGGATCTTCAGAAGGATCCACCCACCTCTTGTAGCGC  Raphanus raphanistrum subsp. landra
FD988682       --> TTGAAGGAACTCAAGGATCTTCAGAAGGATCCACCCACCTCTTGTAGCGC  Raphanus raphanistrum subsp. landra
EX746162       --> TTGAATGGACTCAAGGATCTGCAGAAGGATCCACCCACCTCATGTAGCGC  Raphanus raphanistrum subsp. maritimus
FD540484       --> TTGAAGGAACTCAAGGATCTTCAGAAGGATCCACCCACCTCATGTAGCGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FY439973       --> TTGAAGGAACTCAAGGATCTGCAGAAGGATCCACCCACCTCATGTAGCGC  Raphanus sativus cv GSK3-1
FD973782       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569858       --> TTGAAGGAACTCAAGGATCTGCAGAAGGATCCACCCACCTCATGTAGCGC  Raphanus raphanistrum subsp. landra
EW715737       --> TTGAAGGAACTCAAGGATCTGCAGAAGGATCCACCCACCTCATGTAGCGC  Raphanus sativus var. oleiformis
EW725623       --> TTGAAGGAACTCAAGGATCTTCAGAAGGATCCACCCACCTCTTGTAGCGC  Raphanus sativus cv Early Scarlet Globe
EX890004       --> TTGAAGGAACTCAGGGATCTGCAGAAGGATCCACCCACCTCATGTAGCGC  Raphanus sativus var. oleiformis
FD957431       --> TTGAAGGAACTCAAGGATCTGCAGAAGGATCCACCCACCTCATGTAGCGC  Raphanus sativus cv Rat-Tail Radish #3870
EV548835       --> TTGAAGGAACTCAAGGATCTGCAGAAGGATCCACCCACCTCATGTAGCGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD945817       --> TTGAAGGAACTCAAGGATCTTCAGAAGGATCCACCCACCTCTTGTAGCGC  Raphanus sativus cv Early Scarlet Globe
FD989263       --> TTGAAGGAACTCAAGGATCTTCAGAAGGATCCACCCACCTCTTGTAGCGC  Raphanus raphanistrum subsp. landra
FD544358       --> TTGAAGGAACTCAAGGATCTTCAGAAGGATCCACCCACCTCATGTAGCGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955993       --> TTGAAGGAACTCAAGGATCTTCAGAAGGATCCACCCACCTCATGTAGCGC  Raphanus sativus cv Rat-Tail Radish #3870
FY448168       --> TTGAAGGAACTCAAGGATCTGCAGAAGGATCCACCCACCTCATGTAGCGC  Raphanus sativus cv GSK3-1
EV566321       --> TTGAAGGAACTCAAGGATCTTCAGAAGGATCCACCCACCTCTTGTAGCGC  Raphanus raphanistrum subsp. landra
FY436635       --> TTGAAGGAACTCAAGGATCTGCAGAAGGATCCACCCACCTCATGTAGCGC  Raphanus sativus cv GSK3-1
FY434013       --> TTGAAGGAACTCAAGGATCTGCAGAAGGATCCACCCACCTCATGTAGCGC  Raphanus sativus cv GSK3-1
FY438915       --> TTGAAGGAACTCAAGGATCTGCAGAAGGATCCACCCACCTCATGTAGCGC  Raphanus sativus cv GSK3-1
FY443877       --> TTGAAGGAACTCAAGGATCTGCAGAAGGATCCACCCACCTCATGTAGCGC  Raphanus sativus cv GSK3-1
FY442164       --> TTGAAGGAACTCAAGGATCTGCAGAAGGATCCACCCACCTCATGTAGCGC  Raphanus sativus cv GSK3-1
FY443319       --> TTGAAGGAACTCAAGGATCTGCAGAAGGATCCACCCACCTCATGTAGCGC  Raphanus sativus cv GSK3-1
FY431408       --> TTGAAGGAACTCAAGGATCTGCAGAAGGATCCACCCACCTCATGTAGCGC  Raphanus sativus cv GSK3-1
FD973934       --> ........................................gATGTAGCGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FY440782       --> ..................................................  Raphanus sativus cv GSK3-1
FD556936       --> ..................................................  Raphanus raphanistrum subsp. landra
FD971112       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY429134       --> ..................................................  Raphanus sativus cv GSK3-1

               251    -    301
UN22651        --> AGGACCTGTTGCTGAAGACATGTTTCATTGGCAGGCAACCATAATGGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD536982       <-- AGGACCTGTTGCTGAAGACATGTTTCATTGGCAGGCAACGATAATGGGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD984549       <-- AGGACCTGTTGCTGAAGACATGTTTCATTGGCAGGCAACCATAATGGGTC  Raphanus raphanistrum subsp. landra
FD942038       <-- AGGACCTGTTGCTGAAGACATGTTTCATTGGCAGGCGACGATAATGGGTC  Raphanus sativus cv Early Scarlet Globe
EV571480       <-- AGGACCTGTTGCTGAAGACATGTTTCATTGGCAGGGGACGATAATGGGTC  Raphanus raphanistrum subsp. landra
FD539990       <-- AGGACCTGTTGCTGAAGACATGTTTCATTGGCAGGCAACGATAATGGGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY918922       <-- AGGACCTGTTGCTGAAGACATGTTTCATTGACAGGCAACCATAATGGGTC  Raphanus raphanistrum subsp. landra
EV544438       <-- AGGACCTGTTGCTGAAGACATGTTTCATTGGCAGGCGACGATAATGGGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD951954       <-- ...............AGACATGTTTCATTGGCAGGCAACCATAATGGGTC  Raphanus sativus cv Rat-Tail Radish #3870
FD953134       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD553148       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD969408       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY923081       --> AGGACCTGTTGCTGAAGACATGTTTCATTGACAGGCAACCATAATGGGTC  Raphanus raphanistrum subsp. landra
FD988682       --> AGGACCTGTTGCTGAAGACATGTTTCATTGGCAGGCAACCATAATGGGTC  Raphanus raphanistrum subsp. landra
EX746162       --> AGGACCTGTCGCTGAAGACATGTTTCATTGGCAGGCAACCATAATGGGTC  Raphanus raphanistrum subsp. maritimus
FD540484       --> AGGACCTGTTGCTGAAGACATGTTTCATTGGCAGGCAACGATAATGGGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FY439973       --> AGGACCTGTTGCTGAAGACATGTTTCATTGGCAGGCAACCATAATGGGTC  Raphanus sativus cv GSK3-1
FD973782       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569858       --> AGGACCTGTTGCTGAAGACATGTTTCATTGGCAGGCAACCATAATGGGTC  Raphanus raphanistrum subsp. landra
EW715737       --> AGGACCTGTTGCTGAAGACATGTTTCATTGGCAGGCAACCATAATGGGTC  Raphanus sativus var. oleiformis
EW725623       --> AGGACCTGTTGCTGAAGACATGTTTCATTGGCAGGCGACGATAATGGGTC  Raphanus sativus cv Early Scarlet Globe
EX890004       --> AGGACCTGTTGCTGAAGACATGTTTCATTGGCAGGCAACCATAATGGGTC  Raphanus sativus var. oleiformis
FD957431       --> AGGACCTGTTGCTGAAGACATGTTTCATTGGCAGGCAACCATAATGGGTC  Raphanus sativus cv Rat-Tail Radish #3870
EV548835       --> AGGACCTGTTGCTGAAGACATGTTTCATTGGCAGGCGACGATAATGGGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD945817       --> AGGACCTGTTGCTGAAGACATGTTTCATTGGCAGGCGACGATAATGGGTC  Raphanus sativus cv Early Scarlet Globe
FD989263       --> AGGACCTGTTGCTGAAGACATGTTTCATTGGCAGGCAACCATAATGGGTC  Raphanus raphanistrum subsp. landra
FD544358       --> AGGACCTGTTGCTGAAGACATGTTTCATTGGCAGGCAACGATAATGGGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955993       --> AGGACCTGTTGCTGAAGACATGTTTCATTGGCAGGCAACCATAATGGGTC  Raphanus sativus cv Rat-Tail Radish #3870
FY448168       --> AGGACCTGTTGCTGAAGACATGTTTCATTGGCAGGCAACCATAATGGGTC  Raphanus sativus cv GSK3-1
EV566321       --> AGGACCTGTTGCTGAAGACATGTTTCATTGGCAGGCGACGATAATGGGTC  Raphanus raphanistrum subsp. landra
FY436635       --> AGGACCTGTTGCTGAAGACATGTTTCATTGGCAGGCAACCATAATGGGTC  Raphanus sativus cv GSK3-1
FY434013       --> AGGACCTGTTGCTGAAGACATGTTTCATTGGCAGGCAACCATAATGGGTC  Raphanus sativus cv GSK3-1
FY438915       --> AGGACCTGTTGCTGAAGACATGTTTCATTGGCAGGCAACCATAATGGGTC  Raphanus sativus cv GSK3-1
FY443877       --> AGGACCTGTTGCTGAAGACATGTTTCATTGGCAGGCAACCATAATGGGTC  Raphanus sativus cv GSK3-1
FY442164       --> AGGACCTGTTGCTGAAGACATGTTTCATTGGCAGGCAACCATAATGGGTC  Raphanus sativus cv GSK3-1
FY443319       --> AGGACCTGTTGCTGAAGACATGTTTCATTGGCAGGCAACCATAATGGGTC  Raphanus sativus cv GSK3-1
FY431408       --> AGGACCTGTTGCTGAAGACATGTTTCATTGGCAGGCAACCATAATGGGTC  Raphanus sativus cv GSK3-1
FD973934       --> AGGACCTGTTGCTGAAGACATGTTTCATTGGCAGGCAACGATAATGGGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FY440782       --> ..................................................  Raphanus sativus cv GSK3-1
FD556936       --> ..................................................  Raphanus raphanistrum subsp. landra
FD971112       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY429134       --> ..................................................  Raphanus sativus cv GSK3-1

               301    -    351
UN22651        --> CTTCAGACAGTCCCTACGCTGGTGGTGTTTTCCTTGTTACCATTCATTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD536982       <-- CTTCAGACAGTCCGTACGCTGGTGGTGTTTTCCTTGTTACCATTCATTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD984549       <-- CTTCAGACAGTCCCTACGCTGGTGGTGTTTTCCTTGTTACCATTCATTTC  Raphanus raphanistrum subsp. landra
FD942038       <-- CTTCAGACAGTCCCTACGCTGGTGGTGTTTTCCTTGTTACCATTCATTTC  Raphanus sativus cv Early Scarlet Globe
EV571480       <-- CTTCAGACAGTCCCTACGCTGGTGGTGTTTTCCTTGTTACCATTCATTTC  Raphanus raphanistrum subsp. landra
FD539990       <-- CTTCAGACAGTCCCTACGCTGGTGGTGTTTTCCTTGTTACCATTCATTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY918922       <-- CTTCAGACAGTCCCTACGCTGGTGGTGTTTTCCTTGTTACCATTCATTTC  Raphanus raphanistrum subsp. landra
EV544438       <-- CTTCAGACAGTCCCTACGCTGGTGGTGTTTTTCTTGTTACCATTCATTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD951954       <-- CTTCAGACAGTCCCTACGCTGGTGGTGTTTTCCTTGTTACCATTCATTTC  Raphanus sativus cv Rat-Tail Radish #3870
FD953134       <-- .................GCTGGTGGTGTTTTCCTTGTTACCATTCATTTC  Raphanus sativus cv Rat-Tail Radish #3870
FD553148       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD969408       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY923081       --> CTTCAGACAGTCCCTACGCTGGTGGTGTTTTCCTTGTTACCATTCATTTC  Raphanus raphanistrum subsp. landra
FD988682       --> CTTCAGACAGTCCCTACGCTGGTGGTGTTTTCCTTGTTACCATTCATTTC  Raphanus raphanistrum subsp. landra
EX746162       --> CTTCAGACAGTCCCTACGCTGGTGGTGTTTTTCTTGTTACCATTCATTTC  Raphanus raphanistrum subsp. maritimus
FD540484       --> CTTCAGACAGTCCGTACGCTGGTGGTGTTTTCCTTGTTACCATTCATTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FY439973       --> CTTCAGACAGTCCCTACGCTGGTGGTGTTTTTCTTGTTACCATTCATTTC  Raphanus sativus cv GSK3-1
FD973782       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569858       --> CTTCAGACAGTCCCTACGCTGGTGGTGTTTTCCTTGTTACCATTCATTTC  Raphanus raphanistrum subsp. landra
EW715737       --> CTTCAGACAGTCCCTACGCTGGTGGTGTTTTCCTTGTTACCATTCATTTC  Raphanus sativus var. oleiformis
EW725623       --> CTTCAGACAGTCCCTACGCTGGTGGTGTTTTCCTTGTTACCATTCATTTC  Raphanus sativus cv Early Scarlet Globe
EX890004       --> CTTCAGACAGTCCCTACGCTGGTGGTGTTTTCCTTGTTACCATTCATTTC  Raphanus sativus var. oleiformis
FD957431       --> CTTCAGACAGTCCCTACGCTGGTGGTGTTTTCCTTGTTACCATTCATTTC  Raphanus sativus cv Rat-Tail Radish #3870
EV548835       --> CTTCAGACAGTCCCTACGCTGGTGGTGTTTTTCTTGTTACCATTCATTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD945817       --> CTTCAGACAGTCCCTACGCTGGTGGTGTTTTCCTTGTTACCATTCATTTC  Raphanus sativus cv Early Scarlet Globe
FD989263       --> CTTCAGACAGTCCCTACGCTGGTGGTGTTTTCCTTGTTACCATTCATTTC  Raphanus raphanistrum subsp. landra
FD544358       --> CTTCAGACAGTCCCTACGCTGGTGGTGTTTTCCTTGTTACCATTCATTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955993       --> CTTCAGACAGTCCCTACGCTGGTGGTGTTTTCCTTGTTACCATTCATTTC  Raphanus sativus cv Rat-Tail Radish #3870
FY448168       --> CTTCAGACAGTCCCTACGCTGGTGGTGTTTTTCTTGTTACCATTCATTTC  Raphanus sativus cv GSK3-1
EV566321       --> CTTCAGACAGTCCCTACGCTGGTGGTGTTTTCCTTGTTACCATTCATTTC  Raphanus raphanistrum subsp. landra
FY436635       --> CTTCAGACAGTCCCTACGCTGGTGGTGTTTTTCTTGTTACCATTCATTTC  Raphanus sativus cv GSK3-1
FY434013       --> CTTCAGACAGTCCCTACGCTGGTGGTGTTTTTCTTGTTACCATTCATTTC  Raphanus sativus cv GSK3-1
FY438915       --> CTTCAGACAGTCCCTACGCTGGTGGTGTTTTTCTTGTTACCATTCATTTC  Raphanus sativus cv GSK3-1
FY443877       --> CTTCAGACAGTCCCTACGCTGGTGGTGTTTTTCTTGTTACCATTCATTTC  Raphanus sativus cv GSK3-1
FY442164       --> CTTCAGACAGTCCCTACGCTGGTGGTGTTTTTCTTGTTACCATTCATTTC  Raphanus sativus cv GSK3-1
FY443319       --> CTTCAGACAGTCCCTACGCTGGTGGTGTTTTTCTTGTTACCATTCATTTC  Raphanus sativus cv GSK3-1
FY431408       --> CTTCAGACAGTCCCTACGCTGGTGGTGTTTTTCTTGTTACCATTCATTTC  Raphanus sativus cv GSK3-1
FD973934       --> CTTCAGACAGTCCCTACGCTGGTGGTGTTTTCCTTGTTACCATTCATTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FY440782       --> .........................................ATTCATTTC  Raphanus sativus cv GSK3-1
FD556936       --> ..................................................  Raphanus raphanistrum subsp. landra
FD971112       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY429134       --> ..................................................  Raphanus sativus cv GSK3-1

               351    -    401
UN22651        --> CCTCCAGATTACCCTTTCAAACCTCCTAAGGTTGCCTTTAGGACGAAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD536982       <-- CCTCCAGATTACCCTTTCAAACCACCTAAGGTTGCCTTTAGGACGAAGGT
FD984549       <-- CCTCCAGATTACCCTTTCAAACCCCCTAAGGTTGCCTTTAGGACGAAGGT
FD942038       <-- CCTCCAGATTACCCTTTCAAACCTCCTAAGGTTGCCTTTAGGACGAAGGT
EV571480       <-- CCTCCAGATTACCCTTTCAAACCTCCTAAGGTTGCCTTTAGGACGAAGGT
FD539990       <-- CCTCCAGATTACCCTTTCAAACCTCCTAAGGTTGCCTTTAGGACGAAGGT
EY918922       <-- CCTCCAGATTACCCTTTCAAACCTCCTAAGGTTGCCTTTAGGACGAAGGT
EV544438       <-- CCTCCAGATTACCCTTTCAAACCTCCTAAGGTTGCCTTTAGGACGAAGGT
FD951954       <-- CCTCCAGATTACCCTTTCAAACCTCCTAAGGTTGCCTTTAGGACGAAGGT
FD953134       <-- CCTCCAGATTACCCTTTCAAACCTCCTAAGGTTGCCTTTAGGACGAAGGT
FD553148       <-- ..................................................
FD969408       <-- ..................................................
EY923081       --> CCTCCAGATTACCCTTTCAAACCTCCTAAGGTTGCCTTTAGGACGAAGGT
FD988682       --> CCTCCAGATTACCCTTTCAAACCCCCTAAGGTTGCCTTTAGGACGAAGGT
EX746162       --> CCTCCAGATTACCCTTTCAAACCTCCTAAGGTTGCCTTTAGGACGAAGGT
FD540484       --> CCTCCAGATTACCCTTTCAAACCACCTAAGGTTGCCTTTAGGACGAAGGT
FY439973       --> CCTCCAGATTACCCTTTCAAACCTCCTAAGGTTGCCTTTAGGACGAAGGT
FD973782       --> ..................................................
EV569858       --> CCTCCAGATTACCCTTTCAAACCTCCTAAGGTTGCCTTTAGGACGAAGGT
EW715737       --> CCTCCAGATTACCCTTTCAAACCTCCTAAGGTTGCCTTTAGGACGAAGGT
EW725623       --> CCTCCAGATTACCCTTTCAAACCTCCTAAGGTTGCCTTTAGGACGAAGGT
EX890004       --> TCTCCAGATTACCCTTTCAAACCTCCTAAGGTTGCCTTTAGGACCAAGGT
FD957431       --> CCTCCAGATTACCCTTTCAAACCTCCTAAGGTTGCCTTTAGGACGAAGGT
EV548835       --> CCTCCAGATTACCCTTTCAAACCTCCTAAGGTTGCCTTTAGGACGAAGGT
FD945817       --> CCTCCAGATTACCCTTTCAAACCTCCTAAGGTTGCCTTTAGGACGAAGGT
FD989263       --> CCTCCAGATTACCCTTTCAAACCTCCTAAGGTTGCCTTTAGGACGAAGGT
FD544358       --> CCTCCAGATTACCCTTTCAAACCTCCTAAGGTTGCCTTTAGGACGAAGGT
FD955993       --> CCTCCAGATTACCCTTTCAAACCTCCTAAGGTTGCCTTTAGGACGAAGGT
FY448168       --> CCTCCAGATTACCCTTTCAAACCTCCTAAGGTTGCCTTTAGGACGAAGGT
EV566321       --> CCTCCAGATTACCCTTTCAAACCTCCTAAGGTTGCCTTTAGGACGAAGGT
FY436635       --> CCTCCAGATTACCCTTTCAAACCTCCTAAGGTTGCCTTTAGGACGAAGGT
FY434013       --> CCTCCAGATTACCCTTTCAAACCTCCTAAGGTTGCCTTTAGGACGAAGGT
FY438915       --> CCTCCAGATTACCCTTTCAAACCTCCTAAGGTTGCCTTTAGGACGAAGGT
FY443877       --> CCTCCAGATTACCCTTTCAAACCTCCTAAGGTTGCCTTTAGGACGAAGGT
FY442164       --> CCTCCAGATTACCCTTTCAAACCTCCTAAGGTTGCCTTTAGGACGAAGGT
FY443319       --> CCTCCAGATTACCCTTTCAAACCTCCTAAGGTTGCCTTTAGGACGAAGGT
FY431408       --> CCTCCAGATTACCCTTTCAAACCTCCTAAGGTTGCCTTTAGGACGAAGGT
FD973934       --> CCTCCAGATTACCCTTTCAAACCTCCTAAGGTTGCCTTTAGGACGAAGGT
FY440782       --> CCTCCAGATTACCCTTTCAAACCTCCTAAGGTTGCCTTTAGGACGAAGGT
FD556936       --> ..................................................
FD971112       --> ..................................................
FY429134       --> ..................................................

               401    -    451
UN22651        --> GTTCCATCCCAACATCAACAGCAATGGAAGTATTTGCCTCGACATCTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD536982       <-- GTTCCATCCCAACATCAACAGCAATGGAAGTATTTGCCTCGACGTCTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD984549       <-- GTTCCATCCCAACATCAACAGCAATGGAAGTATTTGCCTCGACATCTTGA  Raphanus raphanistrum subsp. landra
FD942038       <-- GTTCCATCCCAACATCAACAGCAATGGAAGTATTTGCCTCGACATCTTGA  Raphanus sativus cv Early Scarlet Globe
EV571480       <-- GTTCCATCCCAACATCAACAGCAATGGAAGTATTTGCCTCGACATCTTGA  Raphanus raphanistrum subsp. landra
FD539990       <-- GTTCCATCCCAACATCAACAGCAATGGAAGTATTTGCCTCGACATCTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY918922       <-- GTTCCATCCCAACATCAACAGCAATGGAAGTATTTGCCTCGACATCTTGA  Raphanus raphanistrum subsp. landra
EV544438       <-- GTTCCATCCCAACATCAACAGCAATGGAAGTATTTGCCTCGACATCTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD951954       <-- GTTCCATCCCAACATCAACAGCAATGGAAGTATTTGCCTCGACATCTTGA  Raphanus sativus cv Rat-Tail Radish #3870
FD953134       <-- GTTCCATCCCAACATCAACAGCAATGGAAGTATTTGCCTCGACATCTTGA  Raphanus sativus cv Rat-Tail Radish #3870
FD553148       <-- ............................AGTATTTGCCTCGACATCTTGA  Raphanus raphanistrum subsp. landra
FD969408       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY923081       --> GTTCCATCCCAACATCAACAGCAATGGAAGTATTTGCCTCGACATCTTGA  Raphanus raphanistrum subsp. landra
FD988682       --> GTTCCATCCCAACATCAACAGCAATGGAAGTATTTGCCTCGACATCTTGA  Raphanus raphanistrum subsp. landra
EX746162       --> GTTCCATCCCAACATCAACAGCAATGGAAGTATTTGCCTCGACATCTTGA  Raphanus raphanistrum subsp. maritimus
FD540484       --> GTTCCATCCCAACATCAACAGCAATGGAAGTATTTGCCTCGACGTCTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY439973       --> GTTCCATCCCAACATCAACAGCAATGGAAGTATTTGCCTTGACATCTTGA  Raphanus sativus cv GSK3-1
FD973782       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569858       --> GTTCCATCCCAACATCAACAGCAATGGAAGTATTTGCCTCGACATCTTGA  Raphanus raphanistrum subsp. landra
EW715737       --> GTTCCATCCCAACATCAACAGCAATGGAAGTATTTGCCTCGACATCTTGA  Raphanus sativus var. oleiformis
EW725623       --> GTTCCATCCCAACATCAACAGCAATGGAAGTATTTGCCTCGACATCTTGA  Raphanus sativus cv Early Scarlet Globe
EX890004       --> GTTCCATCCCAACATCAACAGCAATGGAAGTATTTGCCTCGACATCTTGA  Raphanus sativus var. oleiformis
FD957431       --> GTTCCATCCCAACATCAACAGCAATGGAAGTATTTGCCTCGACATCTTGA  Raphanus sativus cv Rat-Tail Radish #3870
EV548835       --> GTTCCATCCCAACATCAACAGCAATGGAAGTATTTGCCTCGACATCTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD945817       --> GTTCCATCCCAACATCAACAGCAATGGAAGTATTTGCCTCGACATCTTGA  Raphanus sativus cv Early Scarlet Globe
FD989263       --> GTTCCATCCCAACATCAACAGCAATGGAAGTATTTGCCTCGACATCTTGA  Raphanus raphanistrum subsp. landra
FD544358       --> GTTCCATCCCAACATCAACAGCAATGGAAGTATTTGCCTCGACATCTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955993       --> GTTCCATCCCAACATCAACAGCAATGGAAGTATTTGCCTCGACATCTTGA  Raphanus sativus cv Rat-Tail Radish #3870
FY448168       --> GTTCCATCCCAACATCAACAGCAATGGAAGTATTTGCCTTGACATCTTGA  Raphanus sativus cv GSK3-1
EV566321       --> GTTCCATCCCAACATCAACAGCAATGGAAGTATTTGCCTCGACATCTTGA  Raphanus raphanistrum subsp. landra
FY436635       --> GTTCCATCCCAACATCAACAGCAATGGAAGTATTTGCCTTGACATCTTGA  Raphanus sativus cv GSK3-1
FY434013       --> GTTCCATCCCAACATCAACAGCAATGGAAGTATTTGCCTTGACATCTTGA  Raphanus sativus cv GSK3-1
FY438915       --> GTTCCATCCCAACATCAACAGCAATGGAAGTATTTGCCTTGACATCTTGA  Raphanus sativus cv GSK3-1
FY443877       --> GTTCCATCCCAACATCAACAGCAATGGAAGTATTTGCCTTGACATCTTGA  Raphanus sativus cv GSK3-1
FY442164       --> GTTCCATCCCAACATCAACAGCAATGGAAGTATTTGCCTTGACATCTTGA  Raphanus sativus cv GSK3-1
FY443319       --> GTTCCATCCCAACATCAACAGCAATGGAAGTATTTGCCTTGACATCTTGA  Raphanus sativus cv GSK3-1
FY431408       --> GTTCCATCCCAACATCAACAGCAATGGAAGTATTTGCCTTGACATCTTGA  Raphanus sativus cv GSK3-1
FD973934       --> GTTCCATCCCAACATCAACAGCAATGGAAGTATTTGCCTCGACATCTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY440782       --> GTTCCATCCCAACATCAACAGCAATGGAAGTATTTGCCTTGACATCTTGA  Raphanus sativus cv GSK3-1
FD556936       --> ............................AGTATTTGCCTCGACATCTTGA  Raphanus raphanistrum subsp. landra
FD971112       --> ............................AGTATTTGCCTCGACATCTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY429134       --> ..................................................  Raphanus sativus cv GSK3-1

               451    -    501
UN22651        --> AGGAGCAATGGAGTCCTGCACTCACCATCTCCAAGGTGTTGTTATCGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD536982       <-- AGGAGCAATGGAGTCCTGCACTCACCATCTCCAAGGTGTTGTTATCGATC
FD984549       <-- AGGAGCAATGGAGTCCTGCACTCACCATCTCCAAGGTGTTGTTATCGATC
FD942038       <-- AGGAGCAATGGAGTCCTGCACTCACCATCTCCAAGGTGTTGTTATCGATC
EV571480       <-- AGGAGCAATGGAGTCCTGCACTCACCATCTCCAAGGTGTTGTTATCGATC
FD539990       <-- AGGAGCAATGGAGTCCTGCACTCACCATCTCCAAGGTGTTGTTATCGATC
EY918922       <-- AGGAGCAATGGAGTCCTGCACTCACCATCTCCAAGGTGTTGTTATCGATC
EV544438       <-- AGGAGCAATGGAGTCCTGCACTCACCATCTCCAAGGTGTTGTTATCGATC
FD951954       <-- AGGAGCAATGGAGTCCTGCACTCACCATCTCCAAGGTGTTGTTATCGATC
FD953134       <-- AGGAGCAATGGAGTCCTGCACTCACCATTTCCAAGGTGTTGTTATCGATC
FD553148       <-- AGGAGCAATGGAGTCCTGCACTCACCATCTCCAAGGTGTTGTTATCGATC
FD969408       <-- ..................................................
EY923081       --> AGGAGCAATGGAGTCCTGCACTCACCATCTCCAAGGTGTTGTTATCGATC
FD988682       --> AGGAGCAATGGAGTCCTGCACTCACCATCTCCAAGGTGTTGTTATCGATC
EX746162       --> AGGAGCAATGGAGTCCTGCACTCACCATCTCCAAGGTGTTGTTATCGATC
FD540484       --> AGGAGCAATGGAGTCCTGCACTCACCATCTCCAAGGTGTTGTTATCGATC
FY439973       --> AGGAGCAATGGAGTCCTGCACTCACCATCTCCAAGGTGTTGTTATCGATC
FD973782       --> ..................................................
EV569858       --> AGGAGCAATGGAGTCCTGCACTCACCATCTCCAAGGTGTTGTTATCGATC
EW715737       --> AGGAGCAATGGAGTCCTGCACTCACCATCTCCAAGGTGTTGTTATCGATC
EW725623       --> AGGAGCAATGGAGTCCTGCACTCACCATCTCCAAGGTGTTGTTATCGATC
EX890004       --> AGGAGCAATGGAGTCCTGCACTCACCATCTCCAAGGTGTTGTTATCGATC
FD957431       --> AGGAGCAATGGAGTCCTGCACTCACCATCTCCAAGGTGTTGTTATCGATC
EV548835       --> AGGAGCAATGGAGTCCTGCACTCACCATCTCCAAGGTGTTGTTATCGATC
FD945817       --> AGGAGCAATGGAGTCCTGCACTCACCATCTCCAAGGTGTTGTTATCGATC
FD989263       --> AGGAGCAATGGAGTCCTGCACTCACCATCTCCAAGGTGTTGTTACCGATC
FD544358       --> AGGAGCAATGGAGTCCTGCACTCACCATCTCCAAGGTGTTGTTATCGATC
FD955993       --> AGGAGCAATGGAGTCCTGCACTCACCATCTCCAAGGTGTTGTTATCGATC
FY448168       --> AGGAGCAATGGAGTCCTGCACTCACCATCTCCAAGGTGTTGTTATCGATC
EV566321       --> AGGAGCAATGGAGTCCTGCACTCACCATCTCCAAGGTGTTGTTATCGATC
FY436635       --> AGGAGCAATGGAGTCCTGCACTCACCATCTCCAAGGTGTTGTTATCGATC
FY434013       --> AGGAGCAATGGAGTCCTGCACTCACCATCTCCAAGGTGTTGTTATCGATC
FY438915       --> AGGAGCAATGGAGTCCTGCACTCACCATCTCCAAGGTGTTGTTATCGATC
FY443877       --> AGGAGCAATGGAGTCCTGCACTCACCATCTCCAAGGTGTTGTTATCGATC
FY442164       --> AGGAGCAATGGAGTCCTGCACTCACCATCTCCAAGGTGTTGTTATCGATC
FY443319       --> AGGAGCAATGGAGTCCTGCACTCACCATCTCCAAGGTGTTGTTATCGATC
FY431408       --> AGGAGCAATGGAGTCCTGCACTCACCATCTCCAAGGTGTTGTTATCGATC
FD973934       --> AGGAGCAATGGAGTCCTGCACTCACCATCTCCAAGGTGTTGTTATCGATC
FY440782       --> AGGAGCAATGGAGTCCTGCACTCACCATCTCCAAGGTGTTGTTATCGATC
FD556936       --> AGGAGCAATGGAGTCCTGCACTCACCATCTCCAAGGTGTTGTTATCGATC
FD971112       --> AGGAGCAATGGAGTCCTGCACTCACCATCTCCAAGGTGTTGTTATCGATC
FY429134       --> .................GCACTCACCATCTCCA-GGTGTTGTTATCGATC

               501    -    551
UN22651        --> TGTTCTTTGTTAACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD536982       <-- TGTTCTTTGTTAACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
FD984549       <-- TGTTCTTTGTTGACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
FD942038       <-- TGTTCTTTGTTAACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
EV571480       <-- TGTTCTTTGTTAACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
FD539990       <-- TGTTCTTTGTTAACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
EY918922       <-- TGTTCTTTGTTAACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
EV544438       <-- TGTTCTTTGTTAACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
FD951954       <-- TGTTCTTTGTTAACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
FD953134       <-- CGTTCTTTGTTAACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
FD553148       <-- TGTTCTTTGTTAACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
FD969408       <-- ...............GATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
EY923081       --> TGTTCTTTGTTAACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
FD988682       --> TGTTCTTTGTTGACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
EX746162       --> TGTTCTTTGTTAACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
FD540484       --> TGTTCTTTGTTAACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
FY439973       --> TGTTCTTTGTTAACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
FD973782       --> ..................................................
EV569858       --> TGTTCTTTGTTAACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
EW715737       --> TGTTCTTTGTTAACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
EW725623       --> TGTTCTTTGTTAACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
EX890004       --> TGTTCTTTGTTAACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
FD957431       --> CGTTCTTTGTTAACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
EV548835       --> TGTTCTTTGTTAACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
FD945817       --> TGTTCTTTGTTAACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
FD989263       --> TGTTCTTTGTTAACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
FD544358       --> TGTTCTTTGTTAACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
FD955993       --> TGTTCTTTGTTAACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
FY448168       --> TGTTCTTTGTTAACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
EV566321       --> TGTTCTTTGTTAACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
FY436635       --> TGTTCTTTGTTAACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
FY434013       --> TGTTCTTTGTTAACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
FY438915       --> TGTTCTTTGTTAACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
FY443877       --> TGTTCTTTGTTAACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
FY442164       --> TGTTCTTTGTTAACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
FY443319       --> TGTTCTTTGTTAACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
FY431408       --> TGTTCTTTGTTAACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
FD973934       --> TGTTCTTTGTTAACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
FY440782       --> TGTTCTTTGTTAACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
FD556936       --> TGTTCTTTGTTAACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
FD971112       --> TGTTCTTTGTTAACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT
FY429134       --> TGTTCTTTGTTAACCGATCCAAACCCTGATGATCCTTTGGTGCCTGAGAT

               551    -    601
UN22651        --> AGCTCATATGTACAAGACCGACAAGAACAAGTATGAGTCCACTGCACGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD536982       <-- AGCTCATATGTACAAGACCGACAAGAACAAGTATGAGTCCACTGCACGGA
FD984549       <-- AGCTCATATGTACAAGACCGACAAGAACAAGTATGAGTCCACTGCACGGA
FD942038       <-- AGCTCATATGTACAAGACCGACAAGAACAAGTATGAGTCCACTGCACGGA
EV571480       <-- AGCTCATATGTACAAGACCGACAAGAACAAGTATGAGTCCACTGCACGGA
FD539990       <-- AGCTCATATGTACAAGAC-GACAAGAACAGGTATGAGTCCACTGCACGGA
EY918922       <-- AGCTCATATGTACAAGACCGACAAGAACAAGTATGAGTCCACTGCACGGA
EV544438       <-- AGCTCATATGTACAAGACCGACAAGAACAAGTATGAGTCCACTGCACGGA
FD951954       <-- AGCTCATATGTACAAGACCGACAAGAACAAGTATGAGTCCACCGCACGGA
FD953134       <-- AGCTCATATGTACGAGACCGACAAGAACAAGTATGAGTCCACTGCACGGA
FD553148       <-- AGCTCATATGTACAAGACCGACAAGAACAAGTATGAGTCCACTGCACGGA
FD969408       <-- AGCTCATATGTACAAGACCGACAAGAACAAGTATGAGTCCACTGCACGGA
EY923081       --> AGCTCATATGTACAAGACCGACAAGAACAAGTATGAGTCCACTGCACGGA
FD988682       --> AGCTCATATGTACAAGACCGACAAGAACAAGTATGAGTCCACTGCACGGA
EX746162       --> AGCTCATATGTACAAGACCGACAAGAACAAGTATGAGTCCACCGCACGGA
FD540484       --> AGCTCATATGTACAAGACCGACAAGAACAAGTATGAGTCCACTGCACGGA
FY439973       --> AGCTCATATGTACAAGACCGACAAGAACAAGTATGAGTCCACTGCACGGA
FD973782       --> ..................................................
EV569858       --> AGCTCATATGTACAAGACCGACAAGAACAAGTATGAGTCCACCGCACGGA
EW715737       --> AGCTCATATGTACAAGACCGACAAGAACAAGTATGAGTCCACTGCACGGA
EW725623       --> AGCTCATATGTACAAGACCGACAAGAACAAGTATGAGTCCACTGCACGGA
EX890004       --> AGCTCATATGTACAAGACCGACAAGAACAAGTATGAGTCCACTGCACGGA
FD957431       --> AGCTCATATGTACGAGACCGACAAGAACAAGTATGAGTCCACTGCACGGA
EV548835       --> AGCTCATATGTACAAGACCGACAAGAACAAGTATGAGTCCACTGCACGGA
FD945817       --> AGCTCATATGTACAAGACCGACAAGAACAAGTATGAGTCCACTGCACGGA
FD989263       --> AGCTCATATGTACAAGACCGACAAGAACAAGTATGAGTCCACTGCACGGA
FD544358       --> AGCTCATATGTACAAGAC-GACAAGAACAGGTATGAGTCCACTGCACGGA
FD955993       --> AGCTCATATGTACAAGACCGACAAGAACAAGTATGAGTCCACCGCACGGA
FY448168       --> AGCTCATATGTACAAGACCGACAAGAACAAGTATGAGTCCACTGCACGGA
EV566321       --> AGCTCATATGTACAAGACCGACAAGAACAAGTATGAGTCCACTGCACGGA
FY436635       --> AGCTCATATGTACAAGACCGACAAGAACAAGTATGAGTCCACTGCACGGA
FY434013       --> AGCTCATATGTACAAGACCGACAAGAACAAGTATGAGTCCACTGCACGGA
FY438915       --> AGCTCATATGTACAAGACCGACAAGAACAAGTATGAGTCCACTGCACGGA
FY443877       --> AGCTCATATGTACAAGACCGACAAGAACAAGTATGAGTCCACTGCACGGA
FY442164       --> AGCTCATATGTACAAGACCGACAAGAACAAGTATGAGTCCACTGCACGGA
FY443319       --> AGCTCATATGTACAAGACCGACAAGAACAAGTATGAGTCCACTGCACGGA
FY431408       --> AGCTCATATGTACAAGACCGACAAGAACAAGTATGAGTCCACTGCACGGA
FD973934       --> AGCTCATATGTACAAGACCGACAAGAACAAGTATGAGTCCACTGCACGGA
FY440782       --> AGCTCATATGTACAAGACCGACAAGAACAAGTATGAGTCCACTGCACGGA
FD556936       --> AGCTCATATGTACAAGACCGACAAGAACAAGTATGAGTCCACTGCACGGA
FD971112       --> AGCTCATATGTACAAGACCGACAAGAACAAGTATGAGTCCACTGCACGGA
FY429134       --> AGCTCATATGTACAAGACCGACAAGAACAAGTATGAGTCCACTGCACGGA

               601    -    651
UN22651        --> GCTGGACTCAGAAGTATGCTATGGGCTGAAATGGAAACCCC-AATCCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD536982       <-- GCTGGACTCAGAAGTATGCTATGGGCTGAAATGGAAACCCCcaatcta..  Raphanus raphanistrum subsp. raphanistrum (MS)
FD984549       <-- GCTGGACTCAGAAGTATGCTATGGGCTGAAATGGAAACCCCCAATCTACA  Raphanus raphanistrum subsp. landra
FD942038       <-- GCTGGACTCAGAAGTATGCTATGGGCTGAAATGGAAACCCC-AATCCA..  Raphanus sativus cv Early Scarlet Globe
EV571480       <-- GCTGGACTCAGAAGTATGCTATGGGCTGAAATGGAAACCCC-AATCCACA  Raphanus raphanistrum subsp. landra
FD539990       <-- GCTGGACTCAGAAGTATGCTATGGGCTGAAATGGAAACCCCCAATCTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY918922       <-- GCTGGACTCAGAAGTATGCTATGGGCTGAAATGGAAACCCCCAATCTCCA  Raphanus raphanistrum subsp. landra
EV544438       <-- GCTGGACTCAGAAGTATGCTATGGGCTGAAATGGAAACCCCCAATCTACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD951954       <-- GCTGGACTCAGAAGTATGCTATGGGCTGAAATGGAAACCCCCAATTTACA  Raphanus sativus cv Rat-Tail Radish #3870
FD953134       <-- GCTGGACTCAGAAGTATGCTATGGGCTGAAATGGAAACCCCCAATCTACA  Raphanus sativus cv Rat-Tail Radish #3870
FD553148       <-- GCTGGACTCAGAAGTATGCTATGGGCTAAAATGGAAACCCC-AATCCACA  Raphanus raphanistrum subsp. landra
FD969408       <-- GCTGGACTCAGAAGTATGCTATGGGCTGAAATGGAAACCCCCAATTTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY923081       --> GCTGGACTCAGAAGTATGCTATGGGCTGAAATGGAAACCCCCAATCTCCA  Raphanus raphanistrum subsp. landra
FD988682       --> GCTGGACTCAGAAGTATGCTATGGGCTGAAATGGAAACCCCCAATCTACA  Raphanus raphanistrum subsp. landra
EX746162       --> GCTGGACTCAGAAGTATGCTATGGGCTGAAATGGAAACCCCCAATCTACA  Raphanus raphanistrum subsp. maritimus
FD540484       --> GCTGGACTCAGAAGTATGCTATGGGCTGAAATGGAAACCCCCAATCTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY439973       --> GCTGGACTCAGAAGTATGCTATGGGCTGAAATGGAAACCCC-AATCCACA  Raphanus sativus cv GSK3-1
FD973782       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569858       --> GCTGGACTCAGAAGTATGCTATGGGCTGAAATGGAAACCCCCAATCTACA  Raphanus raphanistrum subsp. landra
EW715737       --> GCTGGACTCAGAAGTATGCTATGGGCTGAAATGGAAACCCCCAATCTACA  Raphanus sativus var. oleiformis
EW725623       --> GCTGGACTCAGAAGTATGCTATGGGTTGAAATGGAAACCCC-AATCCACA  Raphanus sativus cv Early Scarlet Globe
EX890004       --> GCTGGACTCAGAAGTATGCTATGGGCTGAAATGGAAACCCC-AATCCACA  Raphanus sativus var. oleiformis
FD957431       --> GCTGGACTCAGAAGTATGCTATGGGCTGAAATGGAAACCCC.........  Raphanus sativus cv Rat-Tail Radish #3870
EV548835       --> GCTGGACTCAGAAGTATGCTATGGGCTGAAATGGAAACCCCCAATCTACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD945817       --> GCTGGACTCAGAAGTATGCTATGGGCTGAAATGGAAACCCC-AATCCA..  Raphanus sativus cv Early Scarlet Globe
FD989263       --> GCTGGACTCAGAAGTATGCTATGGGCTGAAATGGAAACCCCCAATCTACA  Raphanus raphanistrum subsp. landra
FD544358       --> GCTGGACTCAGAAGTATGCTATGGGCTGAAATGGAAACCCCCAATCTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955993       --> GCTGGACTCAGAAGTATGCTATGGGCTGAAATGGAAACCCCCAATCTACA  Raphanus sativus cv Rat-Tail Radish #3870
FY448168       --> GCTGGACTCAGAAGTATGCTATGGGCTGAAATGGAAACCCC-AATCCACA  Raphanus sativus cv GSK3-1
EV566321       --> GCTGGACTCAGAAGTATGCTATGGGCTGAAATGGAAACCCC-AATCCACA  Raphanus raphanistrum subsp. landra
FY436635       --> GCTGGACTCAGAAGTATGCTATGGGCTGAAATGGAAACCCC-AATCCACA  Raphanus sativus cv GSK3-1
FY434013       --> GCTGGACTCAGAAGTATGCTATGGGCTGAAATGGAAACCCC-AATCCACA  Raphanus sativus cv GSK3-1
FY438915       --> GCTGGACTCAGAAGTATGCTATGGGCTGAAATGGAAACCCC-AATCCACA  Raphanus sativus cv GSK3-1
FY443877       --> GCTGGACTCAGAAGTATGCTATGGGCTGAAATGGAAACCCC-AATCCACA  Raphanus sativus cv GSK3-1
FY442164       --> GCTGGACTCAGAAGTATGCTATGGGCTGAAATGGAAACCCC-AATCCACA  Raphanus sativus cv GSK3-1
FY443319       --> GCTGGACTCAGAAGTATGCTATGGGCTGAAATGGAAACCCC-AATCCACA  Raphanus sativus cv GSK3-1
FY431408       --> GCTGGACTCAGAAGTATGCTATGGGCTGAAATGGAAACCCC-AATCCACA  Raphanus sativus cv GSK3-1
FD973934       --> GCTGGACTCAGAAGTATGCTATGGGCTGAAATGGAAACCCCCAATCTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY440782       --> GCTGGACTCAGAAGTATGCTATGGGCTGAAATGGAAACCCC-AATCCACA  Raphanus sativus cv GSK3-1
FD556936       --> GCTGGACTCAGAAGTATGCTATGGGCTAAAATGGAAACCC..........  Raphanus raphanistrum subsp. landra
FD971112       --> GCTGGA............................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY429134       --> GCTGGACTCAGAAGTATGCTATGGGCTGAAATGGAAACCCC-AATCCACA  Raphanus sativus cv GSK3-1

               651    -    701
UN22651        --> AAACTATCTCTTTATGAAGAA---AAAAAA--GTATTTCCCTAAGTTCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD536982       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD984549       <-- AAACTATCTCTTTATGAAGAA---AAAAAA--GTATTTCCCTAAGTTCTA  Raphanus raphanistrum subsp. landra
FD942038       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV571480       <-- AAACTATCTCTTTATGAAG...............................  Raphanus raphanistrum subsp. landra
FD539990       <-- AAACTATCTCCTTATGAAGAA---AAAAAA-AGTATTTCCCTAAGTTCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY918922       <-- AAACTATCTCTTTATGAAGAA---AAAAAAAAGTATTTCCCTAAGTTCTA  Raphanus raphanistrum subsp. landra
EV544438       <-- AAACTATCTCTTTATGAAGAA---AAAAAA-AGTATTTCCCTAAGTTCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD951954       <-- AAACTATCTCTTTATGAAGAA---AAAAAAAAGTATTTCCCTAAGTTCTA  Raphanus sativus cv Rat-Tail Radish #3870
FD953134       <-- AAACTATCTCTTTATGAAGAA---AAAAAAAAGTATTTCCCTAAGTTCTA  Raphanus sativus cv Rat-Tail Radish #3870
FD553148       <-- AAACTATCTCTTTATGAAGAAGAAAAAAAA--GTATTTCCCTAAGTTCTA  Raphanus raphanistrum subsp. landra
FD969408       <-- AAACTATCTCCTTATGAAGAA---AAAAAA-AGTATTTCCCTAAGTTTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY923081       --> AAACTATCTCTTTATGAAGAA---AAAAAA-AGTATTTCCCTAAGTTCTA  Raphanus raphanistrum subsp. landra
FD988682       --> AAACTATCTCTTTATGAAGAA---AAAAA.....................  Raphanus raphanistrum subsp. landra
EX746162       --> AAACTATCTCTTTATGAAGAA---AAAAAA--GTATTTCCCTAAGTTCTA  Raphanus raphanistrum subsp. maritimus
FD540484       --> AAACTATCTCTTTATGAAAAA---A.........................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY439973       --> AAACTATCTCTTTATGAAGAA---AAAAAA--GTATTTCCCTAAGTTCTA  Raphanus sativus cv GSK3-1
FD973782       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569858       --> AAACTATCTCTTTATGAAGAA---AAAAAAAAGTATTTCCCTAAGTTCTA  Raphanus raphanistrum subsp. landra
EW715737       --> AAACTATCTCTTTATGAAGAA---AAAAAA-AGTATTTCCCTAAGTTCTA  Raphanus sativus var. oleiformis
EW725623       --> AAACTATCTC........................................  Raphanus sativus cv Early Scarlet Globe
EX890004       --> AAACTATCTCTTTATGAAGAA---AAAAAA-AGTATTTCCCTAAGTTCTA  Raphanus sativus var. oleiformis
FD957431       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV548835       --> AAACTATCTCTTTATGAAGAA---AAAAAA-AGTATTTCCCTAAGTTCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD945817       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD989263       --> AAACTATCTCTTTATGAAGAA---AAAAAAAAGTATTTCCCTAAGTTCTA  Raphanus raphanistrum subsp. landra
FD544358       --> AAACTATCTCCTTATGAAGAA---AAAAAA-AGTATTTCCCTAAGTTCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955993       --> AAACTATCTCTTTATGAAGAA---AAAAAA-AGTATTTCCCTAAGTTCTA  Raphanus sativus cv Rat-Tail Radish #3870
FY448168       --> AAACTATCTCTTTATGAAGAA---AAAAAA--GTATTTCCCTAAGTTCTA  Raphanus sativus cv GSK3-1
EV566321       --> AAACTATCTCTTTATGAAG...............................  Raphanus raphanistrum subsp. landra
FY436635       --> AAACTATCTCTTTATGAAGAA---AAAAAA--GTATTTCCCTAAGTTCTA  Raphanus sativus cv GSK3-1
FY434013       --> AAACTATCTCTTTATGAAGAA---AAAAAA--GTATTTCCCTAAGTTCTA  Raphanus sativus cv GSK3-1
FY438915       --> AAACTATCTCTTTATGAAGAA---AAAAAA--GTATTTCCCTAAGTTCTA  Raphanus sativus cv GSK3-1
FY443877       --> AAACTATCTCTTTATGAAGAA---AAAAAA--GTATTTCCCTAAGTTCTA  Raphanus sativus cv GSK3-1
FY442164       --> AAACTATCTCTTTATGAAGAA---AAAAAA--GTATTTCCCTAAGTTCTA  Raphanus sativus cv GSK3-1
FY443319       --> AAACTATCTCTTTATGAAGAA---AAAAAA--GTATTTCCCTAAGTTCTA  Raphanus sativus cv GSK3-1
FY431408       --> AAACTATCTCTTTATGAAGAA---AAAAAA--GTATTTCCCTAAGTTCTA  Raphanus sativus cv GSK3-1
FD973934       --> AAACTATCTCCTTATGAAGAA---AAAAAA-AGTATTTCCCTAAGTTCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY440782       --> AAACTATCTCTTTATGAAGAA---AAAAAA--GTATTTCCCTAAGTTCTA  Raphanus sativus cv GSK3-1
FD556936       --> ..................................................  Raphanus raphanistrum subsp. landra
FD971112       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY429134       --> AAACTATCTCTTTATGAAGAA---AAAAAA--GTATTTCCCTAAGTTCTA  Raphanus sativus cv GSK3-1

               701    -    751
UN22651        --> TGTATGATTCAGTAGACAAATCTCTCGTGTCCTTTTTAAAGTTTCTTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD536982       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD984549       <-- TGTATGATTCAGTAGACAAATCTCTCGTGTCCTTTTTAAAGTTTCTTAAA  Raphanus raphanistrum subsp. landra
FD942038       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV571480       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD539990       <-- TGTATGATTCAGTAGACAAATCTCTCGTGTCCTTTTTAAAATTTCTGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY918922       <-- TGTATGATTCAGTAGACAAATCTCTCGTGTCCTTTTTAAAGTTTCTTAAA  Raphanus raphanistrum subsp. landra
EV544438       <-- TGTATGATTCAGTAGACAAATCTCTCGTGTCCTTTTTAAAGTTTCTTAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD951954       <-- TGTATGATTCAGTAGACAAACCTCTCGTGTCCTTTTTAAAATTTTTGAAA  Raphanus sativus cv Rat-Tail Radish #3870
FD953134       <-- TGTATGATTCAGTAGACAAATCTCTCGTGTCCTTTTTAAAGTTTCTTAAA  Raphanus sativus cv Rat-Tail Radish #3870
FD553148       <-- TGTATGATTCAGTAGACAAATCTCTCGTGTCCTTTTTAAAGTTTCTTAAA  Raphanus raphanistrum subsp. landra
FD969408       <-- TGTATGATTCAGTAGACAAA..............................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY923081       --> TGTATGATTCAGTAGACAAATCTCTCGTGTCCTTTTTAAAGTT.......  Raphanus raphanistrum subsp. landra
FD988682       --> ..................................................  Raphanus raphanistrum subsp. landra
EX746162       --> TGTATGATTCAGTAGACAAATCTCTCGTGTCCTTTTTAAA-TTTCTGAAA  Raphanus raphanistrum subsp. maritimus
FD540484       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY439973       --> TGTATGATTCAGTAGACAAATCTCTCGTGTCCTTTTTAAAGTTTCTTAAA  Raphanus sativus cv GSK3-1
FD973782       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569858       --> TGTATGATTCAGTAGACAAATCTCTCGTGTCCTTTTTAAAATTTCTGAAA  Raphanus raphanistrum subsp. landra
EW715737       --> TGTATGATTCAGTAGACAAATCTCTCGTGTCCTTTTTAAAGTTTCTTAAA  Raphanus sativus var. oleiformis
EW725623       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX890004       --> TGTATGATTCAGTAGACAAATCTCTCGTGTCCTTTTTAAAGTTTCTTAAA  Raphanus sativus var. oleiformis
FD957431       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV548835       --> TGTATGATTCAGTAGACAAATCTCTCGTGTCCTTTTTAAAGTTTCTTAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD945817       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD989263       --> TGTATGATTCAGTAGACAAATCTCTCGTGTCCTTTTTAAAGTTTCTTAAA  Raphanus raphanistrum subsp. landra
FD544358       --> TGTATGATTCAGTAGACAAATCTCTCGTGTCCTTTTTAAAATTTCTGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955993       --> TGTATGATTCAGTAGACAAACCTCTCGTGTCCTTTTTAAAATTTCTGAAA  Raphanus sativus cv Rat-Tail Radish #3870
FY448168       --> TGTATGATTCAGTAGACAAATCTCTCGTGTCCTTTTTAAAGTTTCTTAAA  Raphanus sativus cv GSK3-1
EV566321       --> ..................................................  Raphanus raphanistrum subsp. landra
FY436635       --> TGTATGATTCAGTAGACAAATCTCTCGTGTCCTTTTTAAAGTTTCTTAAA  Raphanus sativus cv GSK3-1
FY434013       --> TGTATGATTCAGTAGACAAATCTCTCGTGTCCTTTTTAAAGTTTCTTAAA  Raphanus sativus cv GSK3-1
FY438915       --> TGTATGATTCAGTAGACAAATCTCTCGTGTCCTTTTTAAAGTTTCTTAAA  Raphanus sativus cv GSK3-1
FY443877       --> TGTATGATTCAGTAGACAAATCTCTCGTGTCCTTTTTAAAGTTTCTTAAA  Raphanus sativus cv GSK3-1
FY442164       --> TGTATGATTCAGTAGACAAATCTCTCGTGTCCTTTTTAAAGTTTCTTAAA  Raphanus sativus cv GSK3-1
FY443319       --> TGTATGATTCAGTAGACAAATCTCTCGTGTCCTTTTTAAAGTTTCTTAAA  Raphanus sativus cv GSK3-1
FY431408       --> TGTATGATTCAGTAGACAAATCTCTCGTGTCCTTTTTAAAGTTTCTTAAA  Raphanus sativus cv GSK3-1
FD973934       --> TGTATGATTCAGTAGACAAATCTCTCGTGTCCTTTTTAAAATTTCTGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY440782       --> TGTATGATTCAGTAGACAAATCTCTCGTGTCCTTTTTAAAGTTTCTTAAA  Raphanus sativus cv GSK3-1
FD556936       --> ..................................................  Raphanus raphanistrum subsp. landra
FD971112       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY429134       --> TGTATGATTCAGTAGACAAATCTCTCGTGTCCTTTTTAAAGTTTCTTAAA  Raphanus sativus cv GSK3-1

               751    -    801
UN22651        --> A-CTGGACCAAATGATGTGGGTCTTGTTTAAAAGAAAACATCATCTTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD536982       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD984549       <-- A-CTGGACCAAATGATGTGGGTCTTGTTTAAA--AAAACATCATCTTTGT  Raphanus raphanistrum subsp. landra
FD942038       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV571480       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD539990       <-- A-CTGGACCAAATGATGTGGGTCTTGTTTAAAAGAAAACATCATCTTTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY918922       <-- A-CTGGACCAAATGATGTGGGTCTTGTTTAAAAGAAAACATCATCTTTGT  Raphanus raphanistrum subsp. landra
EV544438       <-- A-CTGGACCAAATGATGTGGGTCTTGTTTAAAAGAAAACATCATCTTTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD951954       <-- AACTGGACCAAATGATGTGGGTCTTGTTTAAAAGAAAACTTCATCTTTGT  Raphanus sativus cv Rat-Tail Radish #3870
FD953134       <-- A-CTGGACCAAATGATGTGGGTCTTGTTTAAAAGAAAACATCATCTTTGT  Raphanus sativus cv Rat-Tail Radish #3870
FD553148       <-- A-CTGGACCAAATGATGTGGGTCTTGTTTAAAAGAAAACATCATCTTTGT  Raphanus raphanistrum subsp. landra
FD969408       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY923081       --> ..................................................  Raphanus raphanistrum subsp. landra
FD988682       --> ..................................................  Raphanus raphanistrum subsp. landra
EX746162       --> A-CTGGACCAAATGATGTGGGTCTTGTTTAAAAGAAA-CTTCATCTTTGT  Raphanus raphanistrum subsp. maritimus
FD540484       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY439973       --> A-CTGGACCAAATGATGTGGGTCTTGTTTAAAAGAAAACAT-ATCTTTGT  Raphanus sativus cv GSK3-1
FD973782       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569858       --> AACTGGACCAAATGATGTGGGTCTTGTTTAAAAGAAAACTTCATCTTTGT  Raphanus raphanistrum subsp. landra
EW715737       --> A-CTGGACCAAATGATGTGGGTCTTGTTTAAAAGAAAACATCATCTTTGT  Raphanus sativus var. oleiformis
EW725623       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX890004       --> A-CTGGACCAAATGATGTGGGTCTTGTTTAAA-G-AAACATAATCTTTGT  Raphanus sativus var. oleiformis
FD957431       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV548835       --> A-CTGGACCAAATGATGTGGGTCTTGTTTAAAAGAAAACATCATCTTTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD945817       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD989263       --> A-CTGGACCAAATGATGTGGGTCTTGTTTAAAAGAAAACATCATCTTTGT  Raphanus raphanistrum subsp. landra
FD544358       --> A-CTGGACCAAATGATGTGGGTCTTGTTTAAAAGAAA-CATCATCTTTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955993       --> AACTGGACCAAATGATGTGGGTCTTGTTTAAA-GAAAACTTCATCTTTGT  Raphanus sativus cv Rat-Tail Radish #3870
FY448168       --> A-CTGGACCAAATGATGTGGGTCTTGTTTAAAAGAAAACAT-ATCTTTGT  Raphanus sativus cv GSK3-1
EV566321       --> ..................................................  Raphanus raphanistrum subsp. landra
FY436635       --> A-CTGGACCAAATGATGTGGGTCTTGTTTAAAAGAAAACAT-ATCTTTGT  Raphanus sativus cv GSK3-1
FY434013       --> A-CTGGACCAAATGATGTGGGTCTTGTTTAAAAGAAAACAT-ATCTTTGT  Raphanus sativus cv GSK3-1
FY438915       --> A-CTGGACCAAATGATGTGGGTCTTGTTTAAAAGAAAACAT-ATCTTTGT  Raphanus sativus cv GSK3-1
FY443877       --> A-CTGGACCAAATGATGTGGGTCTTGTTTAAAAGAAAACAT-ATCTTTGT  Raphanus sativus cv GSK3-1
FY442164       --> A-CTGGACCAAATGATGTGGGTCTTGTTTAAAAGAAAACAT-ATCTTTGT  Raphanus sativus cv GSK3-1
FY443319       --> A-CTGGACCAAATGATGTGGGTCTTGTTTAAAAGAAAACAT-ATCTTTGT  Raphanus sativus cv GSK3-1
FY431408       --> A-CTGGACCAAATGATGTGGGTCTTGTTTAAAAGAAAACAT-ATCTTTGT  Raphanus sativus cv GSK3-1
FD973934       --> A-CTGGACCAAATGATGTGGGTCTTGTTTAAAAGAAAACATCATCTTTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY440782       --> A-CTGGACCAAATGATGTGGGTCTTGTTTAAAAGAAAACAT-ATCTTTGT  Raphanus sativus cv GSK3-1
FD556936       --> ..................................................  Raphanus raphanistrum subsp. landra
FD971112       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY429134       --> A-CTGGACCAAATGATGTGGGTCTTGTTTAAAAGAAAACAT-ATCTTTGT  Raphanus sativus cv GSK3-1

               801    -    851
UN22651        --> GAAACTAGAAACTGGTGTTTGGTCTTGTGGGTGAATTGTGATTTGATGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD536982       <-- ..................................................
FD984549       <-- GAAACTAGAAACTGGTGTTTGGTCTTGTGGGTGAATTGTGATTTGATGTT
FD942038       <-- ..................................................
EV571480       <-- ..................................................
FD539990       <-- GAAACTAGAAACTGGTGTTTGGTCTTGTGGGTGAATTGTGATTTGATGTT
EY918922       <-- GAAACTAGAAACTGGTGTTTGGTCTTGTGGGTGAATTGTGATTTGATGTT
EV544438       <-- GAAACTAGAAACTGGTGTTTGGTCTTGTGGGTGAATTGTGATTTGATGTT
FD951954       <-- GAAACTAGAAACTGGTGTTTGGTCTTGTGGGTGAATTGTGATTTGATGTT
FD953134       <-- GAAACTAGAAACT.....................................
FD553148       <-- GAAACTAGAAACTGGTGTTTGGTCTTGTGGGTGAATTGTGATTTGATGTT
FD969408       <-- ..................................................
EY923081       --> ..................................................
FD988682       --> ..................................................
EX746162       --> GAA-CTAGAAAC-AGTGTTTGGTCTTGTGGGTGAt...............
FD540484       --> ..................................................
FY439973       --> GAAACTAGAAACTGGTGTTTGGTCTTGTGGGTGAATTGTGATTTGATGTT
FD973782       --> ..................................................
EV569858       --> GAAACTAGAAACTGGTGTTTGGTCTTGTGGGTGAATTGTGATTTGATGTT
EW715737       --> GAAACTAGAAACTGGTGTTTGGTCTTGTGGGTGAATTGTGATTTGATGTT
EW725623       --> ..................................................
EX890004       --> GAAACTAGAAACTGGTGTTTGGTCTTGTGGGTGAttg.............
FD957431       --> ..................................................
EV548835       --> GAAACTAGAAACTGGTGTTTGGTCTTGTGGGTGAATTGTGATTTGATGTT
FD945817       --> ..................................................
FD989263       --> GAA-CTAGAAACTGGTGTTTGGTCTTGTGGGTGAATTGTGATTTGATGTT
FD544358       --> GAAACTAGAAACTGGTGTTTGGTCTTGTGGGTGAATTGTGATTTG.....
FD955993       --> ..................................................
FY448168       --> GAAACTAGAAACTGGTGTTTGGTCTTGTGGGTGAATTGTGATTTGATGTT
EV566321       --> ..................................................
FY436635       --> GAAACTAGAAACTGGTGTTTGGTCTTGTGGGTGAATTGTGATTTGATGTT
FY434013       --> GAAACTAGAAACTGGTGTTTGGTCTTGTGGGTGAATTGTGATTTGATGTT
FY438915       --> GAAACTAGAAACTGGTGTTTGGTCTTGTGGGTGAATTGTGATTTGATGTT
FY443877       --> GAAACTAGAAACTGGTGTTTGGTCTTGTGGGTGAATTGTGATTTGATGTT
FY442164       --> GAAACTAGAAACTGGTGTTTGGTCTTGTGGGTGAATTGTGATTTGATGTT
FY443319       --> GAAACTAGAAACTGGTGTTTGGTCTTGTGGGTGAATTGTGATTTGATGT.
FY431408       --> GAAACTAGAAACTGGTGTTTGGTCTTGTGGGTGAATTGTGATTTGATGTT
FD973934       --> GAAACTAGAAACTGGTGTTTGGTCTTGTGGGTGAATTGTGATTTGATGTT
FY440782       --> GAAACTAGAAACTGGTGTTTGGTCTTGTGGGTGAATTGTGATTTGATGTT
FD556936       --> ..................................................
FD971112       --> ..................................................
FY429134       --> GAAACTAGAAACTGGTGTTTGGTCTTGTGGGTGAATTGTGATTTGATGTT

               851    -    901
UN22651        --> TTATCTTTCTGATTTGGTGAGCCTATCAATTATTCAATTTATCCTAATAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD536982       <-- ..................................................
FD984549       <-- TT................................................
FD942038       <-- ..................................................
EV571480       <-- ..................................................
FD539990       <-- TTATCTTTCcc.......................................
EY918922       <-- TTATCTTTCTGATTTGGTGAGCCTATCAATTATTCAATTTATCCTg....
EV544438       <-- TTATCTTTCTGATTTGGTGAGCCTATCAATTATTCAATTTATCCTAATAC
FD951954       <-- T.................................................
FD953134       <-- ..................................................
FD553148       <-- TTATC.............................................
FD969408       <-- ..................................................
EY923081       --> ..................................................
FD988682       --> ..................................................
EX746162       --> ..................................................
FD540484       --> ..................................................
FY439973       --> TTATC.............................................
FD973782       --> ..................................................
EV569858       --> T.................................................
EW715737       --> T.................................................
EW725623       --> ..................................................
EX890004       --> ..................................................
FD957431       --> ..................................................
EV548835       --> TTATCTTTCTGATTTGGTGAGCCTATCAATTATTCAATTTATCCTAATAC
FD945817       --> ..................................................
FD989263       --> TTATCTTTCTGATT....................................
FD544358       --> ..................................................
FD955993       --> ..................................................
FY448168       --> TTATCTTTCTGATTTGGTGAGCCTATCAATTATTCAATTTATCCT.....
EV566321       --> ..................................................
FY436635       --> TT................................................
FY434013       --> TTATCTTTCTGATTTGGTGAGCCTATCAATTATTCAATTTATCCT.....
FY438915       --> TTATCTTTCTGATTTGGTGAGCCTATCAATTATTCAATTTATCCT.....
FY443877       --> TTATCTaa..........................................
FY442164       --> TTATC.............................................
FY443319       --> ..................................................
FY431408       --> TTATCTTTCTGA......................................
FD973934       --> TTATCTTTCTtaaaaaaa................................
FY440782       --> TTATCTTTCTG.......................................
FD556936       --> ..................................................
FD971112       --> ..................................................
FY429134       --> TTATCTTTCTGATTTGGTGAGCCTATCAATTATTCAATTTATCCT.....

               901    -    951
UN22651        --> CATAGGGCATAAGCCAA
                   ~~~~~~~~~~~~~~~~~
FD536982       <-- .................
FD984549       <-- .................
FD942038       <-- .................
EV571480       <-- .................
FD539990       <-- .................
EY918922       <-- .................
EV544438       <-- CATAGGGCATAAGCC..
FD951954       <-- .................
FD953134       <-- .................
FD553148       <-- .................
FD969408       <-- .................
EY923081       --> .................
FD988682       --> .................
EX746162       --> .................
FD540484       --> .................
FY439973       --> .................
FD973782       --> .................
EV569858       --> .................
EW715737       --> .................
EW725623       --> .................
EX890004       --> .................
FD957431       --> .................
EV548835       --> CATAGGGCATAAGCCAA
FD945817       --> .................
FD989263       --> .................
FD544358       --> .................
FD955993       --> .................
FY448168       --> .................
EV566321       --> .................
FY436635       --> .................
FY434013       --> .................
FY438915       --> .................
FY443877       --> .................
FY442164       --> .................
FY443319       --> .................
FY431408       --> .................
FD973934       --> .................
FY440782       --> .................
FD556936       --> .................
FD971112       --> .................
FY429134       --> .................