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Alignment for radish unigene UN22658

               1      -     51
UN22658        --> CGGCAGTTCAACTATTTCTTTTAACCATCAAATCAAACACAAAAGTAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537796       <-- .....................................CACAAAAGTAACA
EV525379       <-- ..................................................
FD571274       <-- ..................................................
EV550450       <-- ..................................................
EY939673       <-- ..................................................
EX749899       <-- ..................................................
FD971827       <-- ..................................................
FD967849       --> CGGCAGTTCAACTATTTCTTTTAACCATCAAATCAAACACAAAAGTAACA
FD575129       --> .......TCAACTATTTCTTTTAACCATAAAATCAAACACAAAAGTAACA
EY927501       --> ......................................cacAAAGTAACA
EX753479       --> .............................................TAACA
EX767775       --> ............................................cTAACA
EX901318       --> ..............................................AACA
EV545747       --> ...............................................ACA
EY935565       --> ..................................................
FD554878       --> ..................................................

               51     -    101
UN22658        --> AAACCATCATATAGGGAAAAAAAATCCAGTATTT-GACAATAGTAATGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537796       <-- AAACCATCATATAGGGAAAAAAA-TCCAGTATTT-GACAATAGTAATGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV525379       <-- ..........................CAGTATTT-GACA-TAGTAATGTA  Raphanus raphanistrum subsp. maritimus
FD571274       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV550450       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY939673       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX749899       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD971827       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967849       --> AAACCATCATATAGGGAAAAAAA-TCCAGTATTT-GACAATAGTAATGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD575129       --> AAACCATCATATGGGGAAAAAAA-TCCAGTATTT-GACAATAGTAATGTA  Raphanus sativus cv Early Scarlet Globe
EY927501       --> AAACCATCATATAGGGAAAAAAAATCCAGTATTT-GACAATAGTAATGTA  Raphanus sativus var. oleiformis
EX753479       --> AAACCATCATATAGGGAAAAAAA-TCCAGTATTTTGACAATAGTAATGTA  Raphanus raphanistrum subsp. maritimus
EX767775       --> AAACCATCATATAGGGAAAAAAAATCCAGTATTT-GACAATAGTAATGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901318       --> AAACCATCATATAGGGAAAAAAAATCCAGTATTT-GACAATAGTAATGTA  Raphanus sativus cv Early Scarlet Globe
EV545747       --> AAACCATCATATAGGGAAAAAAAATCCAGTATTT-GACAATAGTAATGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935565       --> .............GGGGAAAAAAATCCAGTATTT-GACAATAGTAATGTA  Raphanus sativus cv Early Scarlet Globe
FD554878       --> ..............gagAAAAAAATCCAGTATTT-GACAATAGTAATGTA  Raphanus raphanistrum subsp. landra

               101    -    151
UN22658        --> GACAAAAAGAAG-TACTAATATACTATTCAAAGCAAAATAGATGAAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537796       <-- GACAAAAAGAAG-TACTAATATACTATTCAAAGCAAAATAGATGAAGAAA
EV525379       <-- GACAAAA-GAAG-TACTAATATACTATTCAAATCAAAATAGATGAAGAAA
FD571274       <-- ..................................................
EV550450       <-- ..................................................
EY939673       <-- ..................................................
EX749899       <-- ..................................................
FD971827       <-- ..................................................
FD967849       --> GACAAAAAGAAG-TACTAATATACTATTCAAAGCAAAATAAATGAAAAAA
FD575129       --> GACAAAAAGAAGGTACTAATATACTATTCAAAGCAAAATAGATGAAGAAA
EY927501       --> GACAAAAAGAAG-TACTAATATACTATTCAAAGCAAAATAGATGAAGAAA
EX753479       --> GACAAAAAGAAG-TACTAATATACTATTCAAATCAAAATAGATGAAGAAA
EX767775       --> GACAAAAAGAAG-TACTAATATACTATTCAAAGCAAAATAGATGAAGAAA
EX901318       --> GACAAAAAGAAG-TACCAATATACTATTCAAAGCAAAATAGATGAAGAAA
EV545747       --> GACAAAAAGAAG-TACTAATATACTATTCAAAGCAAAATAGATGAAGAAA
EY935565       --> GACAAAAAGAAGGTACTAATATACTATTCAAAGCAAAATAGATGAAGAAA
FD554878       --> GACAAAAAGAAG-TACTAATATACTATTCAAAGCAAAATAGATGAAGAGA

               151    -    201
UN22658        --> AGTCTTGTTTATTTTTGGTCTGGTACTTATAAGAATAACAAACGCTTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537796       <-- AGTCTTGTTTATTTTTGGTCTGGTACTTATAAGAATAACAAACGCTTTGG
EV525379       <-- AGTCTTGTTTATTTTTGGTCTGGTACTTATAAGAATAACAAACTCTTTGG
FD571274       <-- ..................................................
EV550450       <-- ..................................................
EY939673       <-- ..................................................
EX749899       <-- ..................................................
FD971827       <-- ..................................................
FD967849       --> AGTCTTGTTTATTTTTGGTCTGGTACTTATAAGAATAACAAACGCTTTGG
FD575129       --> AGTCTTGTTTATTTTTGGTCTGGTACTTATAAGAATAACAAACGCTTTGG
EY927501       --> AGTCTTGTTTATTTTTGGTCTGGTACTTATAAAAATAACAAACGCTTTGG
EX753479       --> AGTCTTGTTTATTTTTGGTCTGGTACTTATAAGAATAACAAACTCTTTGG
EX767775       --> AGTCTTGTTTATTTTTGGTCTGGTACTTATAAAAATAACAAACGCTTTGG
EX901318       --> AGTCTTGTTTAATTTTGGTCTGGTACTTATAAGAATAACAAACGCTTTGG
EV545747       --> AGTCTTGTTTATTTTTGGTCTGGTACTTATAAGAATAACAAACGCTTTGG
EY935565       --> AGTCTTGTTTATTTTTGGTCTGGTACTTATAAGAATAACAAACGCTTTGG
FD554878       --> AGTCTTGTTTATTTTTGGTCTGGTACTTATAAGAATAACAAACGCTTTGG

               201    -    251
UN22658        --> TGGTGGTAGATACTTGAAAGGTGGATCCATCAGAGTTTTAGCCGTTGGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537796       <-- TGGTGGTAGATACTTGAAAGGTGGATCCATCAGAGTTTTAGCCGTTGGCA
EV525379       <-- TGGTGGTAGATACTTGAAAGGTGGATCCATCAGAGTTTTAGCCGTTGGCA
FD571274       <-- ...............................................GCA
EV550450       <-- ..................................................
EY939673       <-- ..................................................
EX749899       <-- ..................................................
FD971827       <-- ..................................................
FD967849       --> TGGTGGTAGATACTTGAAAGGGGGATCCATCAAAGTTTTAGCCGTTGGCA
FD575129       --> TGGTGGTAGATACTTGAAAGGTGGATCCATCAAAGTTTTAGCCGTTGGCA
EY927501       --> TGGTGGTAGATACTTGAAAGGTGGATCCATCAAAGTTTTAGCCGTTGGCA
EX753479       --> TGGTGGTAGATACTTGAAAGGTGGATCCATCAGAGTTTTAGCCGTTGGCA
EX767775       --> TGGTGGTAGATACTTGAACGGTGGATCCATCAAAGTTTTAGCCGTTGGCA
EX901318       --> TGGTGGTAGATACTTGAAAGGTGGATCCATCAGAGTTTTAGCCGTTGGCA
EV545747       --> TGGTGGTAGATACTTGAAAGGTGGATCCATCAGAGTTTTAGCCGTTGGCA
EY935565       --> TGGTGGTAGATACTTGAAAGGTGGATCCATCAGAGTTTTAGCCGTTGACA
FD554878       --> TGGTGGTAGATACTTGAAAGGTGGATCCATCAGAGTTTTAGCCGTTGGCA

               251    -    301
UN22658        --> ACAATCTCATGAATGGCCTCAGCGACAGAGACGTCCTCTGCTCTAACCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537796       <-- ACAATCTCATGAATGGCCTCAGCGACAGAGACGTCCTCTGCTCTAACCGC
EV525379       <-- ACAATCTCATGAATTGCCTCAGCGACAGAGACGTCCTCTGCTCTAACCGC
FD571274       <-- ACAATCTCATGAATG-CCTCAGCGACAGAGACGTCCTCTGCTCTAACCGC
EV550450       <-- ..................................................
EY939673       <-- ..................................................
EX749899       <-- ..................................................
FD971827       <-- ..................................................
FD967849       --> GCAATCTCATGAATGGCCTCAGCGACAGAAACGTCCTCTGCTCTAACCGC
FD575129       --> ACAATCTCATGAATGGCCTCAGCGACAGAGACGTCCTCTGCTCTAACCGC
EY927501       --> ACAATCTCATGAATGGCCTCAGCGACAGAAACGTCCTCTGCTCTAACCGC
EX753479       --> ACAATCTCATGAATTGCCTCAGCGACAGAGACGTCCTCTGCTCTAACCGC
EX767775       --> ACAATCTCATGAATGGCCTCAGCGACAGAAACGTCCTCTGCTCTAACCGC
EX901318       --> ACAATCCCATGAATGGCCTCAGCGACAGAGACGTCCTCTGCTCTAACCGC
EV545747       --> ACAATCTCATGAATGGCCTCAGCGACAGAGACGTACTCTGCTCTAACCGC
EY935565       --> ACAATCTCATGAATGGCCTCAGCGACAGAAACGTCCTCTGCTCTAACCGC
FD554878       --> ACAATCTCATGAATGGCCTCAGCGACAGAGACGTCCTCTGCTCTAACCGC

               301    -    351
UN22658        --> CAGTTTCATTGCAATCTCCCTTGAACTGTCCATCCCAAACTGTGCCCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537796       <-- CAGTTTC...........................................
EV525379       <-- CAGTTTCATTGCAATCTCCCTTGAACTGTCCATCCCAAACTGTGCCCTCA
FD571274       <-- CAGTTTCATTGCA-TCTCCCTTGAACTGTCCATCCCAAACTGTGCCCTCA
EV550450       <-- .......................AACTGTCCATCCCAAACTGTGCCCTCA
EY939673       <-- ..................................................
EX749899       <-- ..................................................
FD971827       <-- ..................................................
FD967849       --> CAGTTTCATTGCAATCTCCCTTGAACTGTCCATCCCAAACTGTGCCCTCA
FD575129       --> CAGTTTCATTGCAATCTCCCTTGAACTGTCCATCCCAAACTGTGCCCTCA
EY927501       --> CAGTTTCATTGCAATCTCCCTTGAACTGTCCATCCCAAACTGTGCCCGCA
EX753479       --> CAGTTTCATTGCAATCTCCCTTGAACTGTCCATCCCAAACTGTGCCCTCA
EX767775       --> CAGTTTCATTGCAATCTCCCTTGAACTGTCCATCCCAAACTGTGCCCTCA
EX901318       --> TAGTTTCATTGCAATCTCCCTTGAACTGTCCATCCCAAACTGTGCCCTCA
EV545747       --> CAGTTTCATTGCAATCTCCCTTGAACTGTCCATCCCAAACTGTGCCCTCA
EY935565       --> CAGTTTCACT--AATCTCCCTTGAACTGTCCATCCCAAACTGTGCCCTCA
FD554878       --> CAGTTTCATTGCAATCTCCCTTGAACTGTCCGTCCCAAACTGTGCCCTCA

               351    -    401
UN22658        --> CTAACACTTTCACGTTCCCTATGTACACACCTGACAATAAGCAAGTGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537796       <-- ..................................................
EV525379       <-- CTAACACTTTCACGTTCCCTACGTACACACCTGACAATAAGCAAGTGTGT
FD571274       <-- CTAA-ACTTTCACGTTCCCTATGTACACACCTGACAATAAGCAAGTGTGT
EV550450       <-- CTAACACTTTCACGTTCCCTATGTACACACGTGACAATAAGCAAGTGTGT
EY939673       <-- ..................................................
EX749899       <-- ..................................................
FD971827       <-- ..................................................
FD967849       --> CTAACACTTTCACGTTCCCTATGTACACACCTGACAATAAGCAAGTGTGT
FD575129       --> CTAAAACTTTCACGTTCCCTATGTACACACCTGACAATAAGCAAGTGTGT
EY927501       --> CTAACACTTTCACGTTCCCTATGTACACACCTGACAATAAGCA-GTGTGT
EX753479       --> CTAACACTTTCACGTTCCCTATGTACACACCTGACAATAAGCAAGTGTGT
EX767775       --> CTAACACTTTCACGTTCCCTATGTACACACCTGACAATAAGCAAGTGTGT
EX901318       --> CTAACACTTTCACGTTCCCTATGTACACACCTGACAATAAGCAAGTGTGT
EV545747       --> CTAACACTTTCACGTTCCCTATGTACACACCTGACAATAAGCAAGTGTGT
EY935565       --> CTAAAACTTTCACGTTCCCTATGTACACACCTGACAATAAGCAAGTGTGT
FD554878       --> CTAACACTTTCACGTTCCCTATGTACACACCTGACAATAAGCAAGTGTGT

               401    -    451
UN22658        --> GACCTTGCATTGCTCGGAATTGTCTCCGTCCCCTCACAAGGCTGCATGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537796       <-- ..................................................
EV525379       <-- GACCTTGCATTGCTCGGAACTGTCTCCGTCCCCTCACAAGGCTGCATGCC
FD571274       <-- GACCTTGCATTGCTCGGAATTGTCTCCGTCCCCTCACAAGGCTGCATGCC
EV550450       <-- GACCTTGCATTGCTCGGAATTGTCTCCGTCCCCTCACAAGGCTGCATGCC
EY939673       <-- ........ATTGCTCGGAATTGTCTCCGTCCCCTCACAAGGCTGCATGCC
EX749899       <-- ..................................................
FD971827       <-- ..................................................
FD967849       --> GACCTTGCATTGCTCGGAACTGCCTCCGTCCCCTCACAAGGCTGCATGCC
FD575129       --> GACCTTGCATTGCTCGGAATTGTCTCCGTCCCCTCACAAGGCTGCATGCC
EY927501       --> GACCTTGCATTGCTCGGAATTGTCTCCGTCCCCTCACAAGGCTGCATGCC
EX753479       --> GACCTTGCATTGCTCGGAACTGTCTCCGTCCCCTCACAAGGCTGCATGCC
EX767775       --> GACCTTGCATTGCTCGGAACTGTCTCCGTCCCCTCACAAGGCTGCATGCC
EX901318       --> GACCTTGCATTGCTCGGAACTGTCTCCGTCCCCTCACAAGGCTGCATGCC
EV545747       --> GACCTTGCATTGCTCGGAATTGTCTCCGTCCCCTCACAAGGCTGCATGCC
EY935565       --> GACCTTGCATTGCTCGGAATTGTCTCCGTCCCCTCACAAGGCTGCATGCC
FD554878       --> GACCTTGCATTGCTCGGAATTGTCTCCGTCCCCTCACAAGGCTGCATGCC

               451    -    501
UN22658        --> AAGAAGATCGATGACAGCCTTTATAGCTTCTCCTAAAGTCTCTCTCTGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537796       <-- ..................................................
EV525379       <-- AAGAAGATCGATGACAGCCTTTATAGCTTCTCCTAAAGTCTCTCTCTGGC
FD571274       <-- AAGAAGATCGATGACAGCCTTTATAGCTTCTCCTAAAGTCTCTCTCTGGC
EV550450       <-- AAGAAGATCGATGACAGCGTTTATAGCTTCTCCTAAAGTCTCTCTCTGGC
EY939673       <-- AAGAAGATCGATGACAGCCTTTATAGCTTCTCCTAAAGTCTCCCTCTGGC
EX749899       <-- ..................................................
FD971827       <-- ..................................................
FD967849       --> AA................................................
FD575129       --> AAGAAGATCGATGACAGCCTTTATAGCTTCTCCTAAAGTCTCTCTCTGGC
EY927501       --> AAGAAAATCGATGACAGCCTTTATAGCTTCTCCTAAAGTCTCTCTCTGGC
EX753479       --> AAGAAGATCGATGACAGCCTTTATAGCTTCTCCTAAAGTCTCTCTCTGGC
EX767775       --> AAGAAAATCGATGACAGCCTTTATAGCTTCTCCTAAAGTCTCTCTCTGGC
EX901318       --> AAGAAGATCGATGACAGCCTTTATAGCTTCTCCTAAAGTCTCTCTCTGGC
EV545747       --> AAGAAGATCGATGACAGCCTTTATAGCTTCTCCTAAAGTCTCTCTCTGGC
EY935565       --> AAGAAAATCGATGACAGCCTTTATAGCTTCTCCTAAAGTCTCCCTCTGGC
FD554878       --> AAGAAGATCGATGACAGCCTTTATAGCTTCTCCTAAAGTCTCTCTCTGGC

               501    -    551
UN22658        --> CAAGCCCATATTCGTCTACGTGCTCATCTTCTTCATTCATGCTTTCCCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537796       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV525379       <-- CAAACCCATATTCGCCTACGTGCTCATCTTCTTCGTTCATGCTTTCCCAC  Raphanus raphanistrum subsp. maritimus
FD571274       <-- CAAGCCCATATTCGTCTACGTGCTCATCTTCTTCATTCATGCTTTCCTAC  Raphanus sativus cv Early Scarlet Globe
EV550450       <-- CAAGCCCA--TTCGTCTACGTGCTCATCTTCTTCGTTCATGCTTTCCCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY939673       <-- CAAGCCCATATTCGTCTACGTGCTCATCTTCTTCATTCATGCTTTCCCAC  Raphanus sativus cv Early Scarlet Globe
EX749899       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD971827       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967849       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD575129       --> CAAGCCCATATTCGTCTACGTGCTCATCTTCTTCATTCATGCTTTCCTAC  Raphanus sativus cv Early Scarlet Globe
EY927501       --> CAAGCCCATATTCGTCTACGTGCTCATCTTCTTCGTTCATGCTTTCCCAC  Raphanus sativus var. oleiformis
EX753479       --> CAAGCCCATATTCGTCTACGTGCTCATCTTCTTCGTTCATGCTTTCCCAC  Raphanus raphanistrum subsp. maritimus
EX767775       --> CAAGCCCATATTCGTCTACGTGCTCATCTTCTTCATTCATGCTTTCCCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901318       --> CAAGCCCATATTCGTCTACGTGCTCATCTTCTTCATTCATACTTTCCCAC  Raphanus sativus cv Early Scarlet Globe
EV545747       --> CAAGCCCAT--TCGTCTACGTGCTCATCTTCTTCGTTCATGCTTTCCCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935565       --> CAAGCCCATATTCGTCTACGTGCTCATCTTCTTCATTCATGCTTTCCCAC  Raphanus sativus cv Early Scarlet Globe
FD554878       --> CAAGCCCATATTCGTCTACGTGCTCATCTTCTTCATTCATGCTTTCCCAC  Raphanus raphanistrum subsp. landra

               551    -    601
UN22658        --> GCATTCCTGAAATTGGAGACACCCACCTTCACCATGTAATCTGCAGCTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537796       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV525379       <-- GCATTACTGAAATTGGAGACACCCACCTTCACCATGTAATCTGCAGCTAG  Raphanus raphanistrum subsp. maritimus
FD571274       <-- GCATTCCTGAAATTGGAGACACTCACCTTCACCATGTAATC--TAGCTAC  Raphanus sativus cv Early Scarlet Globe
EV550450       <-- GCATTCCTGAAATTGGAGACACCCACCTTCACCATGTAATCTGCAGCTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY939673       <-- GCATTCCTGAAATTGGAGACACTCACCTTCACCATGTAATCTGCAGCTAC  Raphanus sativus cv Early Scarlet Globe
EX749899       <-- ..........AATTGGAGACACCCACTTTCACCATGTAATCTGCAGCTAG  Raphanus raphanistrum subsp. maritimus
FD971827       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967849       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD575129       --> GCATTCCTGAAATTGGAGACACTCACCTTCACCATGTAATCT--AGCTAC  Raphanus sativus cv Early Scarlet Globe
EY927501       --> GCATTCCTGAAATTGGAGACACCCACCTTCACCATGTAATCTGCAGCTAG  Raphanus sativus var. oleiformis
EX753479       --> GCATTCCTGAAATTGGAGACACCCACCTTCACCATGTAATCTGCAGCTAG  Raphanus raphanistrum subsp. maritimus
EX767775       --> GCATTCCTGAAATTGGAGACACTCACCTTCACCATGTAATCTGCAGCTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901318       --> GCATTCCTGAAATTGGACACACTCACCTTCACCATGTAATCTGCAGCTAG  Raphanus sativus cv Early Scarlet Globe
EV545747       --> GCATTCCTGAAATTGGAGACACCCACCTTCACCATGTAATCTGCAGCTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935565       --> GCATTCCTGAAATTGGAGACACTCACCTTCACCATGTAATCTGCAGCTAC  Raphanus sativus cv Early Scarlet Globe
FD554878       --> GCATTCCTGAAATTGGAGACACCCACCTTCACCATGTAATCTGCAGCTAG  Raphanus raphanistrum subsp. landra

               601    -    651
UN22658        --> AACCTCAAGATCCTCCAGCTGGTACTCATCTTCTACCCCATCGTCCTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537796       <-- ..................................................
EV525379       <-- AACCTCAAGATCCTCCAGCTGGTACTCATCTTCTACCCCATCGTCCTCTG
FD571274       <-- AACCTCAAGATCCTCCAGCTGGTACTCATCTTCTACCCCATCGTCCTCTG
EV550450       <-- AACCTCAAGATCCTCCAGCTGGTACTCATCTTCTACCCCATCGTCCTCTG
EY939673       <-- AACCTCAAGATCCTCCAGCTGGTACTCATCTTCTACCCCATCGTCCTCTG
EX749899       <-- AACCTCAAGATCCTCCAGCTGGTACTCATCTTCTACCCCATCGTCCTCTG
FD971827       <-- ..................................................
FD967849       --> ..................................................
FD575129       --> AACCTCAAGATCCTCCAGCTGGTACTCATCTTCTACCCCATCGTCCTCTG
EY927501       --> AACCTCAAGATCCTCCAGCTGGTACTCATCTTCTACCCCATCGTCCTCTG
EX753479       --> AACCTCAA..........................................
EX767775       --> AACCTCAAGATCCTCCAGCTGGTACTCATCTTCTACCCCATCGTCCTCTG
EX901318       --> AACCTCAAGATCCTCCAGCTGGTACTCATCTTCTACCCCATCGTCCTCTG
EV545747       --> AACCTCAAGATCCTCCAGCTGGTACTCATCTTCTACCCCATCGTCCTCTG
EY935565       --> AAC...............................................
FD554878       --> AACCTCAAGATCCTCCAGCTGGTACTCATCCTCTACCCCATCGTCCTCTG

               651    -    701
UN22658        --> CTTCACCTGTGCTTGGGTCAACCTCCTTAACAACAAAAGTTAATGTGTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537796       <-- ..................................................
EV525379       <-- CTTCACCTGTGCTTGGGTCAACCTCCTTAACAACAAAAGTTAATGTGTTA
FD571274       <-- CTTCACCTGTGCTTGGGTCAACCTCCTTAACAACAAATGTTAATGTGTTA
EV550450       <-- CTTCACCTGTGCTTGGGTCAACCTCCTTAACAACAAAAGTTAATGTGTTA
EY939673       <-- CTTCACCTGTGCTTGGGTCAACCTCCTTAACAACAAATGTTAATGTGTTA
EX749899       <-- CTTCACCAGTGCTTGGGTCAACCTCCTTAACAACAAAAGTTAATGTGTTA
FD971827       <-- ..................................................
FD967849       --> ..................................................
FD575129       --> CTTCACCTGTGC......................................
EY927501       --> CTTCACCTGTGCTTGGGTCAACCTCCTTAACAACAAAAGTTAATGTGTTA
EX753479       --> ..................................................
EX767775       --> CTTCACCTGTGCTTGGGTCA..............................
EX901318       --> CTTCACCTGTGCTTGGGTCAACCTCCTTAACAACAAAAGTTAATGTGTTA
EV545747       --> CTTCACCTGTGCTTGGGTCAACCTCCTTAACAACAAAAGTTAATGTGTTA
EY935565       --> ..................................................
FD554878       --> CTTCACCTGTGCTTGGGTCAACCTCCTTAACAACAAAAGTTAATGTGTTA

               701    -    751
UN22658        --> GAAAACTTTCCAACTGCAGGGACACCTGCTGGCTTCTCAAAAGCAACAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537796       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV525379       <-- GAAAACTTTCCAACTGCAGGGACACCTGCTGGCTTCTCAAAAGCAACAAA  Raphanus raphanistrum subsp. maritimus
FD571274       <-- GAAAACTTTCCAACAGCAGGGACACCTGCGGGCTTCTCAAAAGCAACAAA  Raphanus sativus cv Early Scarlet Globe
EV550450       <-- GAAAACTTTCCAACTGCAGGGACACCTGCTGGCTTCTCAAAAGCAACAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY939673       <-- GAAAACTTTCCAACAGCAGGGACACCTGCGGGCTTCTCAAAAGCAACAAA  Raphanus sativus cv Early Scarlet Globe
EX749899       <-- GAAAACTTTCCAACTGCAGGGACACCTGCTGGCTTCTCAAAAGCAGCAAA  Raphanus raphanistrum subsp. maritimus
FD971827       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967849       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD575129       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY927501       --> GAAAACTTTCCAACTGCAGGGACACCTGCTGGCTTCTCAAAAGCAACAAA  Raphanus sativus var. oleiformis
EX753479       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX767775       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901318       --> GAAAACTTTCCAACAGCAGGGACACCTGCGGGCTTTTCAAAAGCAACAAA  Raphanus sativus cv Early Scarlet Globe
EV545747       --> GAAAACTTTCCAACTGCAGGGACACCTGCTGGCTTCTCAAAAGCAACAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935565       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD554878       --> GAAAACTTTCCAACT...................................  Raphanus raphanistrum subsp. landra

               751    -    801
UN22658        --> GGCTTGACCAGGCGAATCATAAGGAAGTGAGTTCAGGGCCTTTGAAGTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537796       <-- ..................................................
EV525379       <-- GACTTGACCAGGCGAATCATAAGGAAGTGAGTTCAGGGCCTTTGAAGTTA
FD571274       <-- GGCTTGACCAGGCGAATCATAAGGAAGTGAGTTCAGGGCCTTTGAAGTTA
EV550450       <-- GGCTTGACCAGGCGAATCATAAGGAAGTGAGTTCAGGGCCTTTGAAGTTA
EY939673       <-- GGCTTGACCAGGCGAATCATAAGGAAGTGAGTTCAGGGCCTTTGAAGTTA
EX749899       <-- GGCTTGACCAGGCGAATCATAAGGAAGTGAGTTCAGGGCCTTTGAAGTTA
FD971827       <-- ..................................................
FD967849       --> ..................................................
FD575129       --> ..................................................
EY927501       --> GGCTTGACCAGGCGAATCATAAGGAAGTGAG...................
EX753479       --> ..................................................
EX767775       --> ..................................................
EX901318       --> GGCTTGACCAGGCGAATCATAAGGAAGTGAGTTCAGG-CCTTTGAAGTTA
EV545747       --> GGCTTGACCAGGCGAATCAT..............................
EY935565       --> ..................................................
FD554878       --> ..................................................

               801    -    851
UN22658        --> ATTCACTGAATTCCTCTGCTTCTGAAGCATCTACAATGACATTGACCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537796       <-- ..................................................
EV525379       <-- ATTCACTGAATTCCTCTGCTTCTGAAGCATCTACAATGACATTGACCCTC
FD571274       <-- ATTCACTGAATTCCTCTGCCTCTGAAGCATCTACAATGACATTGACCCTC
EV550450       <-- ATTCACTGAATTCCTCTGCTTC--TAGCATCTACAATGACATTGACCCAC
EY939673       <-- ATTCACTGAATTCCTCTGCTTCTGAAGCATCTACAATGACATTGACCCTC
EX749899       <-- ATTCACTGAATTCCTCTGCTTCTGAAGCATCTACAATGACATTGACCCTC
FD971827       <-- ........................AAGCATCTACAATGACATTGACCCTC
FD967849       --> ..................................................
FD575129       --> ..................................................
EY927501       --> ..................................................
EX753479       --> ..................................................
EX767775       --> ..................................................
EX901318       --> ATTCACTGAATTCCTCTGCTTCTGAAGCATCTACA-TGACATTGACCCTC
EV545747       --> ..................................................
EY935565       --> ..................................................
FD554878       --> ..................................................

               851    -    901
UN22658        --> TCCAACAACTGCTCTGGTATTGTGTTAGTGCAGTTGTACTGAAACACCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537796       <-- ..................................................
EV525379       <-- TCCAACAACTGCTCTGGTATTGTGTTAGTGCAGTTGTACTGAAACACCAC
FD571274       <-- TCCAACAACTGCTCTGGTATTGTGTTAGTGCAGTTGTACTGAAACACCAC
EV550450       <-- TCCAACAACTGCTCTGGTATTGTGTTAGTGCAGTTGTACTGAAACACCAC
EY939673       <-- TCCAACAACTGCTCTGGTATTGTGTTAGTGCAGTTGTACTGAAACACCAC
EX749899       <-- TCCAACAACTGCTCTGGTATTGTGTTAGTGCAGTTGTACTGAAACACCAC
FD971827       <-- TCCAACAACTGCTCTGGTATTGTGTTAGTGCAGTTGTACTGAAACACCAC
FD967849       --> ..................................................
FD575129       --> ..................................................
EY927501       --> ..................................................
EX753479       --> ..................................................
EX767775       --> ..................................................
EX901318       --> TCCA-C-ACTGCTCTGGTATTGTGTTAGTGCAGTTGTACTGAA-CACCAC
EV545747       --> ..................................................
EY935565       --> ..................................................
FD554878       --> ..................................................

               901    -    951
UN22658        --> ATGATTGTCAAAGATATGCTTGACAACATTGACGGCGTATTCTGTTTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537796       <-- ..................................................
EV525379       <-- ATGATTGTCAAAGATATGCTTGACAACc......................
FD571274       <-- ATGATTGTCAAAGATATGCTTGACAACATTGACGGCGTATTCTGTTTCTG
EV550450       <-- ATGATTGTCAAAGATATGCTTGACAACATTGACGGCGTATTCTGTTTCTG
EY939673       <-- ATGATTGTCAAAGATATGCTTGACAACATTGACGGCGTATTCTGTTTCTG
EX749899       <-- ATGATTGTCAAAGATATGCTTGACAACATTGACGGCGTATTCTGTTTCTG
FD971827       <-- ATGATTGTCAAAGATATGCTTGACAACATTGACGGCATATTCTGTTTCTG
FD967849       --> ..................................................
FD575129       --> ..................................................
EY927501       --> ..................................................
EX753479       --> ..................................................
EX767775       --> ..................................................
EX901318       --> ATGGTTGTCAAAG.....................................
EV545747       --> ..................................................
EY935565       --> ..................................................
FD554878       --> ..................................................

               951    -   1001
UN22658        --> CTTCAGTTAGCTCCACAGGTGAAGAAGACTTGAAAAGTTTTCCAAAAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537796       <-- ..................................................
EV525379       <-- ..................................................
FD571274       <-- CTTCAGTTAGCTCCACAGGTGAAGAAGACTTGAAAAGTTTTCCAAAAGCC
EV550450       <-- CTTCAGTTAGCTCCACAGGTGAAGAAGACTTGAAAAGTTTTCCAAAAGCC
EY939673       <-- CTTCAGTTAGCTCCACAGGTGAAGAAGAC.....................
EX749899       <-- CTTCAGTTAGCTCCACAGGTGAAGAAGACTTGAAAAGTTTTCCAAAAGCC
FD971827       <-- CTTCAGTTAGCTCCACAGGTGAAGAAGACTTGAAAAGTTTTCCAAAAGCG
FD967849       --> ..................................................
FD575129       --> ..................................................
EY927501       --> ..................................................
EX753479       --> ..................................................
EX767775       --> ..................................................
EX901318       --> ..................................................
EV545747       --> ..................................................
EY935565       --> ..................................................
FD554878       --> ..................................................

               1001   -   1051
UN22658        --> GCAAACTCAGGAATAGATGAGAGAAGTCTTTCATAGCCATCAAATCCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537796       <-- ..................................................
EV525379       <-- ..................................................
FD571274       <-- GCAAACTCAGGAATAGATGAGAGAAGTCTTTCATAGCCATCAAATCCc..
EV550450       <-- GCAAACTCAGGAATAGATGAGAGAAGTCTTTCATAGCCATCAAATCCAGA
EY939673       <-- ..................................................
EX749899       <-- GCAAACTCAGGAATAGATGAGAGAAGTCTTTCATAGCCATCAAATCCAGA
FD971827       <-- GCAAACTCTGGAATAGATGAGAGAAGTCTTTCATAGGCATCAAATCCAGA
FD967849       --> ..................................................
FD575129       --> ..................................................
EY927501       --> ..................................................
EX753479       --> ..................................................
EX767775       --> ..................................................
EX901318       --> ..................................................
EV545747       --> ..................................................
EY935565       --> ..................................................
FD554878       --> ..................................................

               1051   -   1101
UN22658        --> AGTAGGTGCAGCTGGTGGCGCACCGAGACCAGTGGGCTTTTTACCCTGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537796       <-- ..................................................
EV525379       <-- ..................................................
FD571274       <-- ..................................................
EV550450       <-- AGTAGGTGCAGCTGGTGGCGCACCGAGACCAGTGGGCTTTTTACCCTGGG
EY939673       <-- ..................................................
EX749899       <-- AGTAGGTGCGGCTGGTGGCGCACCGAGACCAGTGG...............
FD971827       <-- AGTAGGTGCAGCTGGTGGCGCACCGAGACCAGTGGGCTTTTTACCCTGGG
FD967849       --> ..................................................
FD575129       --> ..................................................
EY927501       --> ..................................................
EX753479       --> ..................................................
EX767775       --> ..................................................
EX901318       --> ..................................................
EV545747       --> ..................................................
EY935565       --> ..................................................
FD554878       --> ..................................................

               1101   -   1151
UN22658        --> CTTTCTTCTCTGCAAGGGGCTGGGATTTTACTTCCCTAGGCACAGAGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537796       <-- ..................................................
EV525379       <-- ..................................................
FD571274       <-- ..................................................
EV550450       <-- CTTTCTTCTCTGCAAGGGGCTGGGATTTTACTTCCCTAc...........
EY939673       <-- ..................................................
EX749899       <-- ..................................................
FD971827       <-- CTTTCTTCTCTGCAAGGGGCTGGGATTTTACTCCCCTAGGCACAGAGTTG
FD967849       --> ..................................................
FD575129       --> ..................................................
EY927501       --> ..................................................
EX753479       --> ..................................................
EX767775       --> ..................................................
EX901318       --> ..................................................
EV545747       --> ..................................................
EY935565       --> ..................................................
FD554878       --> ..................................................

               1151   -   1201
UN22658        --> ATGTCAAAAGCTTCTTCAGAAGGATCATAATTCTTCAGACTGGTTTCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537796       <-- ..................................................
EV525379       <-- ..................................................
FD571274       <-- ..................................................
EV550450       <-- ..................................................
EY939673       <-- ..................................................
EX749899       <-- ..................................................
FD971827       <-- ATGTCAAAAGCTTCTTCAGAAGGATCATAATTCTTCAGACTGGTTTCCAT
FD967849       --> ..................................................
FD575129       --> ..................................................
EY927501       --> ..................................................
EX753479       --> ..................................................
EX767775       --> ..................................................
EX901318       --> ..................................................
EV545747       --> ..................................................
EY935565       --> ..................................................
FD554878       --> ..................................................

               1201   -   1251
UN22658        --> GTTGACCAGAGGAACCTCAAGGGAACCAAGTAGAAACTCCTTGCAATCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537796       <-- ..................................................
EV525379       <-- ..................................................
FD571274       <-- ..................................................
EV550450       <-- ..................................................
EY939673       <-- ..................................................
EX749899       <-- ..................................................
FD971827       <-- GTTGACCAGAGGAACCTCAAGGGAACCAAGTAGAAACTCCTTGCAATCTT
FD967849       --> ..................................................
FD575129       --> ..................................................
EY927501       --> ..................................................
EX753479       --> ..................................................
EX767775       --> ..................................................
EX901318       --> ..................................................
EV545747       --> ..................................................
EY935565       --> ..................................................
FD554878       --> ..................................................

               1251   -   1301
UN22658        --> TCTCAGTGTCAATAGTACCATCACCACCAAGGACGCTCAAAAATAGTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537796       <-- ..................................................
EV525379       <-- ..................................................
FD571274       <-- ..................................................
EV550450       <-- ..................................................
EY939673       <-- ..................................................
EX749899       <-- ..................................................
FD971827       <-- TCTCAGTGTCAATAGTACCATCACCACCAAGGACGCTCAAAAATAGTGTT
FD967849       --> ..................................................
FD575129       --> ..................................................
EY927501       --> ..................................................
EX753479       --> ..................................................
EX767775       --> ..................................................
EX901318       --> ..................................................
EV545747       --> ..................................................
EY935565       --> ..................................................
FD554878       --> ..................................................

               1301   -   1351
UN22658        --> GCTCTATCACGGACCTCATCATCACTGTCATAGATGCAGCGCTTCAACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537796       <-- ..................................................
EV525379       <-- ..................................................
FD571274       <-- ..................................................
EV550450       <-- ..................................................
EY939673       <-- ..................................................
EX749899       <-- ..................................................
FD971827       <-- GCTCTATCACGGACCTCATCATCACTGTCATAGATGCAGCGCTTCAACAG
FD967849       --> ..................................................
FD575129       --> ..................................................
EY927501       --> ..................................................
EX753479       --> ..................................................
EX767775       --> ..................................................
EX901318       --> ..................................................
EV545747       --> ..................................................
EY935565       --> ..................................................
FD554878       --> ..................................................

               1351   -   1401
UN22658        --> AATGGTAATACGGGGCTTCAAGGAATCAACCATAAATCCAAACTTTGCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537796       <-- ..................................................
EV525379       <-- ..................................................
FD571274       <-- ..................................................
EV550450       <-- ..................................................
EY939673       <-- ..................................................
EX749899       <-- ..................................................
FD971827       <-- AATGGTAATACGGGGCTTCAAGGAATCAACCATAAATCCAAACTTTGCAC
FD967849       --> ..................................................
FD575129       --> ..................................................
EY927501       --> ..................................................
EX753479       --> ..................................................
EX767775       --> ..................................................
EX901318       --> ..................................................
EV545747       --> ..................................................
EY935565       --> ..................................................
FD554878       --> ..................................................