RadishBase

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Alignment for radish unigene UN22664

               1      -     51
UN22664        --> GGATCACACAAACCATTTCACTCCAATGGCTACAACAACAACACCACCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911088       <-- ..................................................
EX776767       <-- ..................................................
EV572263       <-- ..................................................
EY918069       <-- ..................................................
EX751898       <-- ..................................................
EV573650       <-- ..................................................
EX891056       <-- ..................................................
EY919528       <-- ..................................................
EX768342       <-- ..................................................
EV571638       <-- ..................................................
EY927400       <-- ..................................................
FD531896       <-- ..................................................
EY920527       <-- ..................................................
EY931439       --> GGATCACACAAACCATTTCACTCCAATGGCTACAACAACA---CCACCAT
EV567292       --> ...ggACACAAACCATTTCACTCCAATGGCTACAACAACAACACCACCAT
EX886738       --> ..................................................
EV569051       --> ..................................................
EY923778       --> ..................................................
EY924937       --> ..................................................
EV566525       --> ..................................................
EV539366       --> ..................................................

               51     -    101
UN22664        --> GGGAAGAGCTCTTAGGCTCCAAGAACTGGGACACTCTCCTAGACCCACTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911088       <-- ..................................................
EX776767       <-- ..................................................
EV572263       <-- ..................................................
EY918069       <-- ..................................................
EX751898       <-- ..................................................
EV573650       <-- ..................................................
EX891056       <-- ..................................................
EY919528       <-- ..................................................
EX768342       <-- ..................................................
EV571638       <-- ..................................................
EY927400       <-- ..................................................
FD531896       <-- ..................................................
EY920527       <-- ..................................................
EY931439       --> GGGAAGAGCTCTTAGGCTCCAAGAACTGGGACACTCTCCTAGACCCACTA
EV567292       --> GGGAAGAGCTCTTAGGCTCCAAGAACTGGGACACTCTCCTAGACCCACTA
EX886738       --> ............................................CCACTA
EV569051       --> ..................................................
EY923778       --> ..................................................
EY924937       --> ..................................................
EV566525       --> ..................................................
EV539366       --> ..................................................

               101    -    151
UN22664        --> GACCAATCACTTCGCCAGCTCATCCTCCGTTGCGGCGACTTTTGCCAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911088       <-- ..................................................
EX776767       <-- ..................................................
EV572263       <-- ..................................................
EY918069       <-- ..................................................
EX751898       <-- ..................................................
EV573650       <-- ..................................................
EX891056       <-- ..................................................
EY919528       <-- ..................................................
EX768342       <-- ..................................................
EV571638       <-- ..................................................
EY927400       <-- ..................................................
FD531896       <-- ..................................................
EY920527       <-- ..................................................
EY931439       --> GACCAATCACTTCGCCAGCTCATCCTCCGTTGCGGCGACTTTTGCCAAGC
EV567292       --> GACCAATCACTTCGACAGCTCATTCTCCGTTGCGGTGACTTTTGCCAAGC
EX886738       --> GACCAATCACTTCGCCAGCTCATCCTCCGTTGCGGCGACTTTTGCCAAGC
EV569051       --> ..................................................
EY923778       --> ..................................................
EY924937       --> ..................................................
EV566525       --> ..................................................
EV539366       --> ..................................................

               151    -    201
UN22664        --> CACCTACGACGCTTTCGTCAACGACCAGAACTCCAAGTACTGCGGAGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911088       <-- ..................................................
EX776767       <-- ..................................................
EV572263       <-- ..................................................
EY918069       <-- ..................................................
EX751898       <-- ..................................................
EV573650       <-- ..................................................
EX891056       <-- ..................................................
EY919528       <-- ..................................................
EX768342       <-- ..................................................
EV571638       <-- ..................................................
EY927400       <-- ..................................................
FD531896       <-- ..................................................
EY920527       <-- ..................................................
EY931439       --> CACCTACGACGCTTTCGTCAACGACCAGAACTCCAAGTACTGCGGAGCCA
EV567292       --> CACCTACGACTCTTTCGTCAACGACCAGAACTCCAAGTACTGTGGAGCCA
EX886738       --> CACCTACGACGCTTTCGTCAACGACCAGAACTCCAAGTACTGCGGAGCCA
EV569051       --> ..................................................
EY923778       --> ..................................................
EY924937       --> ..................................................
EV566525       --> ..................................................
EV539366       --> ..................................................

               201    -    251
UN22664        --> GCCGTTACGGCAAGTCTTCCTTCTTCGACAAGGTCATGCTCGAGTCAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911088       <-- ..................................................
EX776767       <-- ..................................................
EV572263       <-- ..................................................
EY918069       <-- ..................................................
EX751898       <-- ..................................................
EV573650       <-- ..................................................
EX891056       <-- ..................................................
EY919528       <-- ..................................................
EX768342       <-- ..................................................
EV571638       <-- ..................................................
EY927400       <-- ..................................................
FD531896       <-- ..................................................
EY920527       <-- ..................................................
EY931439       --> GCCGTTACGGCAAGTCTTCCTTCTTCGACAAGGTCATGCTCGAGTCAGCT
EV567292       --> GCCGTTACGGCAAGTCTTCCTTCTTCGACAAGGTCATGCTCGAGTCAGCT
EX886738       --> GCCGTTACGGCAAGTCTTCCTTCTTCGACAAGGTCATGCTCGAGTCAGCT
EV569051       --> ..................................................
EY923778       --> ..................................................
EY924937       --> ..................................................
EV566525       --> ..................................................
EV539366       --> ..................................................

               251    -    301
UN22664        --> TCTGACTACACGGTCACGAGCTTCCTCTACGCCACGGCTCGTGTCTCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911088       <-- ..................................................
EX776767       <-- ..................................................
EV572263       <-- ..................................................
EY918069       <-- ..................................................
EX751898       <-- ..................................................
EV573650       <-- ..................................................
EX891056       <-- ..................................................
EY919528       <-- ..................................................
EX768342       <-- ..................................................
EV571638       <-- ..................................................
EY927400       <-- ..................................................
FD531896       <-- ..................................................
EY920527       <-- ..................................................
EY931439       --> TCTGACTACACGGTCACGAGCTTCCTCTACGCCACGGCTCGTGTCTCTCT
EV567292       --> TCTGACTACACGGTCACGAGCTTCCTCTACGCCACGGCTCGTGTCTCTCT
EX886738       --> TCTGACTACACGGTCACGAGCTTCCTCTACGCCACGGCTCGTGTCTCTCT
EV569051       --> ..................................................
EY923778       --> ..................................................
EY924937       --> ..................................................
EV566525       --> ..................................................
EV539366       --> ..................................................

               301    -    351
UN22664        --> CCCCGAAGGTTTGCTTCTCCGCTCGCAGTCACGAGACTCTTGGGACCGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911088       <-- ..................................................
EX776767       <-- ..................................................
EV572263       <-- ..................................................
EY918069       <-- ..................................................
EX751898       <-- ..................................................
EV573650       <-- ..................................................
EX891056       <-- ..................................................
EY919528       <-- ..................................................
EX768342       <-- ..................................................
EV571638       <-- ..................................................
EY927400       <-- ..................................................
FD531896       <-- ..................................................
EY920527       <-- ..................................................
EY931439       --> CCCCGAAGGTTTGCTTCTCCGCTCGCAGTCACGAGACTCTTGGGACCGTG
EV567292       --> CCCCGAAGGTTTGCTTCTCCGCTCACAGTCACGAGACTCTTGGGACCGTG
EX886738       --> CCCCGAAGGTTTGCTTCTCCGCTCGCAGTCACGAGACTCTTGGGACCGTG
EV569051       --> ..................................................
EY923778       --> ..................................................
EY924937       --> ..................................................
EV566525       --> ..................................................
EV539366       --> ..................................................

               351    -    401
UN22664        --> AGTCTAACTGGTTCGGTTACATCGCTGTGACGTCTGACGAACGTACCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911088       <-- ..................................................
EX776767       <-- ..................................................
EV572263       <-- ..................................................
EY918069       <-- ..................................................
EX751898       <-- ..................................................
EV573650       <-- ..................................................
EX891056       <-- ..................................................
EY919528       <-- ..................................................
EX768342       <-- ..................................................
EV571638       <-- ..................................................
EY927400       <-- ..................................................
FD531896       <-- ..................................................
EY920527       <-- ..................................................
EY931439       --> AGTCTAACTGGTTCGGTTACATCGCTGTGACGTCTGACGAACGTACCAAG
EV567292       --> AGTCTAACTGGTTCGGTTACATCGCTGTAACGTCTGACGAACGTACCAAG
EX886738       --> AGTCTAACTGGTTCGGTTACATCGCTGTGACGTCTGACGAACGTACCAAG
EV569051       --> ..................gCATCGCTGTAACGTCTGACGAACGTACCAAG
EY923778       --> ..................................................
EY924937       --> ..................................................
EV566525       --> ..................................................
EV539366       --> ..................................................

               401    -    451
UN22664        --> GGCTTTGGGACGCCGTGAGATCTACGTGGCTCTTAGAGGGACGAGTAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911088       <-- ..................................................
EX776767       <-- ..................................................
EV572263       <-- ..................................................
EY918069       <-- ..................................................
EX751898       <-- ..................................................
EV573650       <-- ..................................................
EX891056       <-- ..................................................
EY919528       <-- ..................................................
EX768342       <-- ..................................................
EV571638       <-- ..................................................
EY927400       <-- ..................................................
FD531896       <-- ..................................................
EY920527       <-- ..................................................
EY931439       --> G-CTTTAGGACGCCGTGAGATCTACGTGGCTCTTAGAGGGACGAGTAGGA
EV567292       --> GGCTTTGGGACGCCGTGAGATCTACGTCGCTCTTAGAGGGACGAGTAGGA
EX886738       --> G-CTTTAGGACGCCGTGAGATCTACGTGGCTCTTAGAGGGACGAGTAGGA
EV569051       --> G-CTTTGGGACGCCGTGAGATCTACGTCGCTCTTAGAGGGACGAGTAGGA
EY923778       --> ..................................................
EY924937       --> ..................................................
EV566525       --> ..................................................
EV539366       --> ..................................................

               451    -    501
UN22664        --> ACTATGAGTGGATTAATGTTTTGGGAGCTAGGCCTACTTCAGCTGACCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911088       <-- ..................................................
EX776767       <-- ..................................................
EV572263       <-- ..................................................
EY918069       <-- ..................................................
EX751898       <-- ..................................................
EV573650       <-- ..................................................
EX891056       <-- ..................................................
EY919528       <-- ..................................................
EX768342       <-- ..................................................
EV571638       <-- ..................................................
EY927400       <-- ..................................................
FD531896       <-- ..................................................
EY920527       <-- ..................................................
EY931439       --> ACTATGAGTGGATTAATGTTTTGGGAGCTAGGCCTACTTCAGCTGACCCG
EV567292       --> ACTATGAGTGGATCAATGTTTTGGGAGCTAGGCCTACTTCAGCTGACCCG
EX886738       --> ACTATGAGTGGATTAATGTTTTGGGAGCTAGGCCTACTTCAGCTGACCCG
EV569051       --> ACTATGAGTGGATCAATGTTTTGGGAGCTAGGCCTACTTCAGCTGACCCG
EY923778       --> ..................................................
EY924937       --> ..................................................
EV566525       --> ..................................................
EV539366       --> ..................................................

               501    -    551
UN22664        --> CTGCTGACCGGACCGGAACAGAACGGTTCTGGTTCGAAGTTAGTTGAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911088       <-- ................gaccGAACGGTTCTG-TTCGAAGTTAGT-GAAGC
EX776767       <-- ........................GGTTCTG-TTCTAAGT-AACTGAAGC
EV572263       <-- .............................TGGTTCGAAGTTAGTTGAAGC
EY918069       <-- ..............................................AAGC
EX751898       <-- ..................................................
EV573650       <-- ..................................................
EX891056       <-- ..................................................
EY919528       <-- ..................................................
EX768342       <-- ..................................................
EV571638       <-- ..................................................
EY927400       <-- ..................................................
FD531896       <-- ..................................................
EY920527       <-- ..................................................
EY931439       --> CTGCTGACCGGACCGGAACAGAACGGTTCTGGTTCGAAGTTAGTTGAAGC
EV567292       --> CTGCTGACCGGACCGGAACAGAACGGTTCTGGTTCGAAGTTAGTTGAAGC
EX886738       --> CTGCTGACCGGACCGGAACAGAACGGTTCTGGTTCGAAGTTAGTTGAAGC
EV569051       --> CTGCTGACCGGACCGGAACAGAACGGTTCTGGTTCGAAGTTAGTTGAAGC
EY923778       --> ..................................................
EY924937       --> ..................................................
EV566525       --> ..................................................
EV539366       --> ..................................................

               551    -    601
UN22664        --> TGGTAGTACTTTTGGTAGCGACAGTGAAGACGAAGAAGGGTGTAAGGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911088       <-- TGGTAGTACTTT-GGTAGCGACAGTGAAGACGAGGAAGGGTGTAAGGTGA
EX776767       <-- TGTTAGTACTTAT-GTAGCGACAGTGAAGATGAAGAAGGGTGTAAGGTGA
EV572263       <-- TGGTAGTACTTTTGGTAGCGACAGTGAAGACGAAGAAGGGTGTAAGGTGA
EY918069       <-- TGTTAGTACTTAT-GTAGCGACAGTGAAGATGAAGAAGGGTGTAAGGTGA
EX751898       <-- .GGTAGTACTTTTGGTAGCGACAGTGAAGACGAAGAAGGGTGTAAGGTGA
EV573650       <-- .....................CAGTGAAGACGAAGAAGGGTGTAAGGTGA
EX891056       <-- ...........................AGACGAAGAAGGGTGTAAGGTGA
EY919528       <-- ..................................................
EX768342       <-- ..................................................
EV571638       <-- ..................................................
EY927400       <-- ..................................................
FD531896       <-- ..................................................
EY920527       <-- ..................................................
EY931439       --> TGGTAGTACTTTTGGTAGCGACAGTGAAGACGAAGAAGGGTGTAAGGTGA
EV567292       --> TGGTAGTACTTTTGGTAGCGACAGTGAAGACGAAGAAGGGTGTAAGGTGA
EX886738       --> TGGTAGTACTTTTGGTAGCGACAGTGAAGACGAAGAAGGGTGTAAGGTGA
EV569051       --> TGGTAGTACTTTTGGTAGCGACAGTGAAGACGAAGAAGGGTGTAAGGTGA
EY923778       --> ..................................................
EY924937       --> ..................................................
EV566525       --> ..................................................
EV539366       --> ..................................................

               601    -    651
UN22664        --> TGCTCGGATGGCTCACAATCTACACTTCTGATCACTCAGAATCGAAGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911088       <-- TGCTCGGCTGGCTCACAATCTACACTTCTGACCACTCAGAATCGAAGTTC
EX776767       <-- TGCTCGGATGGCTCACTATCTACACTTCCGATCACTCAGAATCGAAGTTC
EV572263       <-- TGCTCGGATGGCTCACAATCTACACTTCTGATCACTCAGAATCGAAGTTC
EY918069       <-- TGCTCGGATGGCTCACTATCTACACTTCCGATCACTCAGAATCGAAGTTC
EX751898       <-- TGCTCGGATGGCTCACAATCTACACTTCTGATCACTCAGAATCGAAGTTC
EV573650       <-- TGCTCGGATGGCTCACAATCTACACTTCTGATCACTCAGAATCGAAGTTC
EX891056       <-- TGCTCGGATGGCTCACAATCTACACTTCTGATCACTCAGAATCGAAGTTC
EY919528       <-- ............................................AAGTTC
EX768342       <-- ..................................................
EV571638       <-- ..................................................
EY927400       <-- ..................................................
FD531896       <-- ..................................................
EY920527       <-- ..................................................
EY931439       --> TGCTCGGATGGCTCACAATCTACACTTCTGATCACTCAGAATCGAAGTTC
EV567292       --> TGCTCGGATGGCTCACAATCTACACTTCTGATCACTCAGAATCGAAGTTC
EX886738       --> TGCTCGGATGGCTCACAATCTACACTTCTGATCACTCAGAATCGAAGTTC
EV569051       --> TGCTCGGATGGCTCACAATCTACACTTCTGATCACTCAGAATCGAAGTTC
EY923778       --> ....gGGATGGCTCACTATCTACACTTCCGATCACTCAGAATCGAAGTTC
EY924937       --> ....gGGATGGCTCACTATCTACACTTCCGATCACTCAGAATCGAAGTTC
EV566525       --> ..................................................
EV539366       --> ..................................................

               651    -    701
UN22664        --> ACTAAGATAAGTCTACGGCTACAGTTGTTAACTAGGATCAAGGAGCTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911088       <-- ACTAAGCTGAGTCTACGGCTACAGTTGCTAACTAGGATCAAGGAGCTTCT
EX776767       <-- ACTAAGCTGAGTCTGCGGCTACAGTTGCTAACTAGGATCAAGGAGCTTTT
EV572263       <-- ACTAAGATAAGTCTACGGCTACAGTTGTTAACTAGGATCAAGGAGCTTCT
EY918069       <-- ACTAAGCTGAGTCTGCGGCTACAGTTGCTAACTAGGATCAAGGAGCTTTT
EX751898       <-- ACTAAGATAAGTCTACGGCTACAGTTGTTAACTAGGATCAAGGAGCTTCT
EV573650       <-- ACTAAGATAAGTCTACGGCTACAGTTGTTAACTAGGATCAAGGAGCTTCT
EX891056       <-- ACTAAGATAAGTCTACGGCTACAGTTGTTAACTAGGATCAAGGAGCTTCT
EY919528       <-- ACTAAGCTGAGTCTGCGGCTACAGTTGCTAACTAGGATCAAGGAGCTTTT
EX768342       <-- ..................................................
EV571638       <-- ..................................................
EY927400       <-- ..................................................
FD531896       <-- ..................................................
EY920527       <-- ..................................................
EY931439       --> ACTAAGATAAGTCTACG-CTACAGTTGTTAA...................
EV567292       --> ACTAAGATAAGTCTACGGCTACAGTTGTTAACTAGGATCAAGGAGCTTCT
EX886738       --> ACTAAGATAAGTCTACGGCTACAGTTGTTAACTAGGATCAAGGAGCTTCT
EV569051       --> ACTAAGATAAGTCTACGGCTACAGTTGTTAACTAGGATCAAGGAGCTTCT
EY923778       --> ACTAAGCTGAGTCTGCGGCTACAGTTGCTAACTAGGATCAAGGAGCTTTT
EY924937       --> ACTAAGCTGAGTCTGCGGCTACAGTTGCTAACTAGGATCAAGGAGCTTTT
EV566525       --> ..................................................
EV539366       --> ..................................................

               701    -    751
UN22664        --> GTTGAAGTATAAGGACGAGAAACCGAGCATTGTGTTGACTGGACATAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911088       <-- GGTGAAGTATAAGGACGAGAAACCGAGCATTGTGTTGACTGGACATAGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776767       <-- GTTGAAGTATAAGGACGAGAAACCGAGCATTGTGTTGACTGGACATAGCT  Raphanus raphanistrum subsp. landra
EV572263       <-- GTTGAAGTATAAGGACGAGAAGCCGAGCATTGTGTTGACTGGACATAGCT  Raphanus raphanistrum subsp. landra
EY918069       <-- GTTGAAGTATAAGGACGAGAAACCGAGCATTGTGTTGACTGGACATAGCT  Raphanus raphanistrum subsp. landra
EX751898       <-- GTTGAAGTATAAGGACGAGAAGCCGAGCATTGTGTTGACTGGACATAGCT  Raphanus raphanistrum subsp. maritimus
EV573650       <-- GTTGAAGTATAAGGACGAGAAGCCGAGCATTGTGTTGACTGGACATAGCT  Raphanus raphanistrum subsp. landra
EX891056       <-- GTTCAAGTATAAGGACGAGAAGCCGAGCATTGTGTTGACTGGACATAGCT  Raphanus sativus var. oleiformis
EY919528       <-- GTTGAAGTATAAGGACGAGAAACCGAGCATTGTGTTGACTGGACATAGCT  Raphanus raphanistrum subsp. landra
EX768342       <-- .....AGTATAAGGACGAGAAACCGAGCATTGTGTTGACTGGACATAGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571638       <-- ...........gGGACGAGAAACCGAGCATTGTGTTGACTGGACATAGCT  Raphanus raphanistrum subsp. landra
EY927400       <-- ..................................................  Raphanus sativus var. oleiformis
FD531896       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY920527       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY931439       --> ..................................................  Raphanus sativus var. oleiformis
EV567292       --> GTTGAAGTATAAGGACGAGAAGCCGAGCATTGTGTTGACTGGACATAGCT  Raphanus raphanistrum subsp. landra
EX886738       --> GTTCAAGTATAAAGACGAGAAGCCGAGCATTGTGTTGACTGGACATAGCT  Raphanus sativus var. oleiformis
EV569051       --> GTTGAAGTATAAGGACGAGAAGCCGAGCATTGTGTTGACTGGACATAGCT  Raphanus raphanistrum subsp. landra
EY923778       --> GTTGAAGTATAAGGACGAGAAACCGAGCATTGTGTTGACTGGACATAGCT  Raphanus raphanistrum subsp. landra
EY924937       --> GTTGAAGTATAAGGACGAGAAACCGAGCATTGTGTTGACTGGACATAGCT  Raphanus raphanistrum subsp. landra
EV566525       --> ...........gGGACGAGAAACCGAGCATTGTGTTGACTGGACATAGCT  Raphanus raphanistrum subsp. landra
EV539366       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               751    -    801
UN22664        --> TGGGAGCCACTGAGGCTGTCCTCGCAGCCTATGACATAGCTGAGAACGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911088       <-- TGGGAGCCACTGAGGCTGTTCTCGCGGCCTATGACATAGCTGAGAACGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776767       <-- TGGGAGCCACTGAGGCTGTCCTCGCAGCCTATGACATAGCTGAGAACGCT  Raphanus raphanistrum subsp. landra
EV572263       <-- TGGGAGCCACTGAGGCTGTCCTCGCAGCCTATGACATAGCTGAGAACGCT  Raphanus raphanistrum subsp. landra
EY918069       <-- TGGGAGCCACTGAGGCTGTCCTCGCAGCCTATGACATAGCTGAGAACGCT  Raphanus raphanistrum subsp. landra
EX751898       <-- TGGGAGCCACTGAGGCTGTCCTCGCAGCCTATGACATAGCTGAGAACGCT  Raphanus raphanistrum subsp. maritimus
EV573650       <-- TGGGAGCCACTGAGGCTGTCCTCGCAGCCTATGACATAGCTGAGAACGCT  Raphanus raphanistrum subsp. landra
EX891056       <-- TGGGAGCCACTGAGGCTGTTCTCGCGGCCTATGACATAGCTGAGAACGCT  Raphanus sativus var. oleiformis
EY919528       <-- TGGGAGCCACTGAGGCTGTCCTCGCAGCCTATGACATAGCTGAGAACGCT  Raphanus raphanistrum subsp. landra
EX768342       <-- TGGGAGCCACTGAGGCTGTTCTCGCGGCCTATGACATAGCTGAGAACGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571638       <-- TGGGAGCCACTGAGGCTGTCCTCGCAGCCTATGACATAGCTGAGAACGCT  Raphanus raphanistrum subsp. landra
EY927400       <-- ...........................................GAACGCT  Raphanus sativus var. oleiformis
FD531896       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY920527       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY931439       --> ..................................................  Raphanus sativus var. oleiformis
EV567292       --> TGGGAGCCACTGAGGCTGTCCTCGCAGCCTATGACATAGCTGAGAA....  Raphanus raphanistrum subsp. landra
EX886738       --> TGGGAGCCACTGAG-CTGTTCTCGCGGCCTATGACATAGCTGAGAACGCT  Raphanus sativus var. oleiformis
EV569051       --> TGGGAGCCACTGAGGCTGTCCTCGCAGCCTATGACATAGCTGAGAACGCT  Raphanus raphanistrum subsp. landra
EY923778       --> TGGGAGCCACTGAGGCTGTCCTCGCAGCCTATGACATAGCTGAGAACGCT  Raphanus raphanistrum subsp. landra
EY924937       --> TGGGAGCCACTGAGGCTGTCCTCGCAGCCTATGACATAGCTGAGAACGCT  Raphanus raphanistrum subsp. landra
EV566525       --> TGGGAGCCACTGAGGCTGTCCTCGCAGCCTATGACATAGCTGAGAACGCT  Raphanus raphanistrum subsp. landra
EV539366       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               801    -    851
UN22664        --> TCCGGTGATGATGTTCCGGTCACTGGGATCGTGTTCGGCTGTCCACAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911088       <-- TCCGGTGATGATGTTCCGGTCACTGGGATCGTGTTTGGCTGTCCACAGGT
EX776767       <-- TCCGGTGATGATGTTCCGGTCACTGGGATCGTGTTCGGCTGTCCACAGGT
EV572263       <-- TCCGGTGATGATTTTCCGGTCACTGGGATCGTATTTGGCTGTACACAAGT
EY918069       <-- TCCGGTGATGATGTTCCGGTCACTGGGATCGTGTTCGGCTGTCCACAGGT
EX751898       <-- TCCGGTGATGATGTTCCGGTCACTGGGATCGTGTTCGGCTGTCCACAGGT
EV573650       <-- TCCGGTGATGATGTTCCGGTCACTGGGATCGTATTTGGCTGTC-A-AG-T
EX891056       <-- TCCGGTGATGATGTTCCGGTCATTGGGATCGTGTTTGGTTGTCCACAAGT
EY919528       <-- TCCGGTGATGATGTTCCGGTCACTGGGATCGTGTTCGGCTGTCCACAGGT
EX768342       <-- TCCGGTGATGATGTTCCGGTCACTGGGATCGTGTTTGGCTGTCCACAGGT
EV571638       <-- TCCGGTGATGATGTTCCGGTCACTGGGATCGTGTTCGGCTGTCCACAGGT
EY927400       <-- TCCGGTGATGATGTTCCGGTCACTGGGATCGTGTTTGGTTGTCCACAAGT
FD531896       <-- ..................................................
EY920527       <-- ..................................................
EY931439       --> ..................................................
EV567292       --> ..................................................
EX886738       --> ..................................................
EV569051       --> TCCGGTGATGATGTTCCGGTCACTGGGATCGTATTTGGCTGTC-A-AG-T
EY923778       --> TCCGGTGATGATGTTCCGGTCACTGGGATCGTGTTCGGCTGTCCACAGGT
EY924937       --> TCCGGTGATGATGTTCCGGTCACTGGGATCGTGTTCGGCTGTCCACAGGT
EV566525       --> TCCGGTGATGATGTTCCGGTCACTGGGATCGTGTTCGGCTGTCCACAGGT
EV539366       --> ..................................................

               851    -    901
UN22664        --> GGGTAACAGGGAGTTCAAGGACGAAGTAACGCGTCACAAGAACTTGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911088       <-- GGGTAACAGGGAGTTCAAGGACGAAGTAACGCGTCACAAGAACTTGAAGA
EX776767       <-- GGGTAACAGGGAGTTCAAGGACGAAGTAACGCGTCACAAGAACTTGAAGA
EV572263       <-- GGGGAACAGGGAGTTCAAGGACGAAGTAACGCGTCACAAGAACTTGAAGA
EY918069       <-- GGGTAACAGGGAGTTCAAGGACGAAGTAACGCGTCACAAGAACTTGAAGA
EX751898       <-- GGGTAACAGGGAGTTCAAGGACGAAGTAACGCGTCACAAGAACTTGAAGA
EV573650       <-- GGGGAACAGGGAGTTCAAGGACGAAGTAACGCGTCACAAGAACTTGAAGA
EX891056       <-- GGGTAACAGGGAGTTCAATGACGAAGTAACGCGTCACAAGAACTTGAAGA
EY919528       <-- GGGTAACAGGGAGTTCAAGGACGAAGTAACGCGTCACAAGAACTTGAAGA
EX768342       <-- GGGTAACAGGGAGTTCAAGGACGAAGTAACGCGTCACAAGAACTTGAAGA
EV571638       <-- GGGTAACAGGGAGTTCAAGGACGAAGTAACGCGTCACAAGAACTTGAAGA
EY927400       <-- GGGTAACAGGGAGTTCAAGGACGAAGTAACGCGTCACAAGAACTTGAAGA
FD531896       <-- ..................................................
EY920527       <-- ..................................................
EY931439       --> ..................................................
EV567292       --> ..................................................
EX886738       --> ..................................................
EV569051       --> GGGGAACAGGGAGTTCAAGGACGAAGTAACGCGTCACAAGAACTTGAAGA
EY923778       --> GGGTAACAGGGAGTTCAAGGACGAAGTAACGCGTCACAAGAACTTGAAGA
EY924937       --> GGGTAACAGGGAGTTCAAGGACGAAGTAACGCGTCACAAGAACTTGAAGA
EV566525       --> GGGTAACAGGGAGTTCAAGGACGAAGTAACGCGTCACAAGAACTTGAAGA
EV539366       --> ..................................................

               901    -    951
UN22664        --> TCCTTCATGTGAGGAACACGATTGATCTCTTGACTCGATATCCAGGAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911088       <-- TCCTTCATGTGAGGAACACGATTGATCTCTTGACTCGATATCCAGGAGGA
EX776767       <-- TCCTTCATGTGGGGAACACGATTGATCTCTTGACTCGATATCCAGGAGGA
EV572263       <-- TCCTTCATGTGAGGAACACGATTGATCTCTTGACTCGATATCCAGGAGGA
EY918069       <-- TCCTTCATGTGAGGAACACGATTGATCTCTTGACTCGATATCCAGGAGGA
EX751898       <-- TCCTTCATGTGAGGAACACGATTGATCTCTTGACTCGATATCCAGGAGGA
EV573650       <-- TCCTTCATGTGAGGAACACGATTGATCTCTTGACTCGATATCCAGGAGGA
EX891056       <-- TCCTTCATGTGAGGAACACGATTGATCTCTTGACTCGATATCCAGGAGGA
EY919528       <-- TCCTTCATGTGAGGAACACGATTGATCTCTTGACTCGATATCCAGGAGGA
EX768342       <-- TCCTTCATGTGAGGAACACGATTGATCTCTTGACTCGATATCCAGGAGGA
EV571638       <-- TCCTTCATGTGAGGAACACGATTGATCTCTTGACTCGATATCCAGGAGGA
EY927400       <-- TCCTTCATGTGAGGAACACGATTGATCTCTTGACTCGATATCCAGGAGGA
FD531896       <-- .............................TTGACTCGATATCCAGGAGGA
EY920527       <-- ..................................................
EY931439       --> ..................................................
EV567292       --> ..................................................
EX886738       --> ..................................................
EV569051       --> TCCTTCATGTGAGGAACACGATTGATCTCTTGACTCGATATCCAGGAGGA
EY923778       --> TCCTTCATGTGAGGAACACGATTGATCTCTTGACTCGATATCCAGGAGGA
EY924937       --> TCCTTCATGTGAGGAACACGATTGATCTCTTGACTCGATATCCAGGAGGA
EV566525       --> TCCTTCATGTGAGGAACACGATTGATCTCTTGACTCGATATCCAGGAGGA
EV539366       --> ..................................................

               951    -   1001
UN22664        --> CTCTTGGGGTATGTTGATATAGGAACCAACTTTGTGATTGATACAAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911088       <-- CTCTTGGGGTATGTTGATATAGGAACCAACTTTGTGATCGATACAAAGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776767       <-- CTCTTGGGGTATGTTGATATAGGAACCAACTTTGTGATTGATACAAAGAA  Raphanus raphanistrum subsp. landra
EV572263       <-- CTCTTGGGGTATGTTGATATAGGAACCAACTTTGTGATCGATACAAAGAA  Raphanus raphanistrum subsp. landra
EY918069       <-- CTCTTGGGGTATGTTGATATAGGAACCAACTTTGTGATTGATACAAAGAA  Raphanus raphanistrum subsp. landra
EX751898       <-- CTCTTGGGGTATGTTGATATAGGAACCAACTTTGTGATTGATACAAAGAA  Raphanus raphanistrum subsp. maritimus
EV573650       <-- CTCTTGGGGTATGTTGATATAGGAACCAACTTTGTGATCGATACAAAGAA  Raphanus raphanistrum subsp. landra
EX891056       <-- CTCTTGGGGTATGTTGATATCGGAACCAACTTTGTGATCGATACAAAGAA  Raphanus sativus var. oleiformis
EY919528       <-- CTCTTGGGGTATGTTGATATAGGAACCAACTTTGTGATTGATACAAAGAA  Raphanus raphanistrum subsp. landra
EX768342       <-- CTCTTGGGGTATGTTGATATAGGAACCAACTTTGTGATCGATACAAAGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571638       <-- CTCTTGGGGTATGTTGATATAGGAACCAACTTTGTGATTGATACAAAGAA  Raphanus raphanistrum subsp. landra
EY927400       <-- CTCTTGGGGTATGTTGATATCGGAACCAACTTTGTGATCGATACAAAGAA  Raphanus sativus var. oleiformis
FD531896       <-- CTCTTGGGGTATGTTGATATAGGAACCAACTTTGTGATTGATACAAAGAA  Raphanus raphanistrum subsp. maritimus
EY920527       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY931439       --> ..................................................  Raphanus sativus var. oleiformis
EV567292       --> ..................................................  Raphanus raphanistrum subsp. landra
EX886738       --> ..................................................  Raphanus sativus var. oleiformis
EV569051       --> CTCTTGGGGTATGTTGATATAGGAACCAACTTTGTGATCGATACAAAGAA  Raphanus raphanistrum subsp. landra
EY923778       --> CTCTTGGGGTATGTTGATATAGGAACCAACTTTGTGATTGATACAAAGAA  Raphanus raphanistrum subsp. landra
EY924937       --> CTCTTGGGGTATGTTGATATAGGAACCAACTTTGTGATTGATACAAAGAA  Raphanus raphanistrum subsp. landra
EV566525       --> CTCTTGGGGTATGTTGATATAGGAACCAACTTTGTGATTGATACAAAGAA  Raphanus raphanistrum subsp. landra
EV539366       --> .....................................gcGATACAAAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)

               1001   -   1051
UN22664        --> GTCACCTTACCTGAAGGATTCAAGGAATCCAGGGGACTGGCACAATCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911088       <-- GTCACCTTACCTGAAGGATTCAAGGAATCCAGGGGACTGGCACAATCTTC
EX776767       <-- GTCACCTTACCTGAAGGATTCAAGGAATCCAGGGGACTGGCACAATCTTC
EV572263       <-- GTCACCTTACCTGAAGGATTCAAGGAATCCAGGGGACTGACACAATCTTC
EY918069       <-- GTCACCTTACCTGAAGGATTCGAGGAATCCAGGGGACTGGCACAATCTTC
EX751898       <-- GTCACCTTACCTGAAGGATTCAAGGAATCCAGGGGACTGGCACAATCTTC
EV573650       <-- GTCACCTTACCTGAAGGATTCAAGGAATCCAGGGGACTGGCACAATCTTC
EX891056       <-- GTCACCTTACCTGAAGGATTCAAGGAATCCAGGGGACTGGCACAATCTTC
EY919528       <-- GTCACCTTACCTGAAGGATTCAAGGAATCCAGGGGACTGGCACAATCTTC
EX768342       <-- GTCACCTTACCTGAAGGATTCAAGGAATCCAGGGGACTGGCACAATCTTC
EV571638       <-- GTCACCTTACCTGAAGGATTCAAGGAATCCAGGGGACTGGCACAATCTTC
EY927400       <-- GTCACCTTACCTGAAGGATTCAAGGAATCCAGGGGACTGGCACAATCTTC
FD531896       <-- GTCACCTTACCTGAAGGATTCAAGGAATCCAGGGGACTGGCACAATCTTC
EY920527       <-- ..........CTGAAGGATTCAAGGAATCCAGGGGACTGGCACAATCTTC
EY931439       --> ..................................................
EV567292       --> ..................................................
EX886738       --> ..................................................
EV569051       --> GTCACCTTACCTGAAGGATTCAAGGAATCCAGGGGACTGGCACAATCTTC
EY923778       --> GTCACCTTACCTGAAGGATTCAAGGAATCCAGGGGACTGGCACAATCTTC
EY924937       --> GTCACCTTACCTGAAGGATTCAAGGAATCCAGGGGACTGGCACAATCTTC
EV566525       --> GTCACCTTACCTGAAGGATTCAAGGAATCCAGGGGACTGGCACAATCTTC
EV539366       --> GTCACCTTACCTGAAGGATTCAAGGAATCCAGGGGACTGGCGCAATCTTC

               1051   -   1101
UN22664        --> AGGCAATGCTCCATGTGGTTGCAGGATGGAATGGTAAGAAAGGAGAGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911088       <-- AGGCAATGCTCCATGTGGTTGCAGGATGGAATGGGAAGAAAGGAGAGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776767       <-- AGGCAATGCTCCATGTGGTTGCAGGATGGAATGGTAAGAAAGGAGAGTTT  Raphanus raphanistrum subsp. landra
EV572263       <-- AGGCAATGCTCCATGTGGTTGCAGGATGGAATGGGAGGAAAGGAGAGTTT  Raphanus raphanistrum subsp. landra
EY918069       <-- AGGCAATGCTCCATGTGGTTGCAGGATGGAATGGTAAGAAAGGAGAGTTT  Raphanus raphanistrum subsp. landra
EX751898       <-- AGGCAATGCTCCATGTGGTTGCAGGATGGAATGGTAAGAAAGGAGAGTTT  Raphanus raphanistrum subsp. maritimus
EV573650       <-- AGGCAATGCTCCATGTGGTTGCAGGATGGAATGGGAAGAAAGGAGAGTTT  Raphanus raphanistrum subsp. landra
EX891056       <-- AGGCAATGCTCCATGTGGTTGCAGGATGGAATGGGAAGAAAGGAGAGTTT  Raphanus sativus var. oleiformis
EY919528       <-- AGGCAATGCTCCATGTGGTTGCAGGATGGAATGGTAAGAAAGGAGAGTTT  Raphanus raphanistrum subsp. landra
EX768342       <-- AGGCAATGCTCCATGTGGTTGCAGGATGGAATGGGAAGAAAGGAGAGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571638       <-- AGGCAATGCTCCATGTGGTTGCAGGATGGAATGGTAAGAAAGGAGAGTTT  Raphanus raphanistrum subsp. landra
EY927400       <-- AGGCAATGCTCCATGTGGTTGCAGGATGGAATGGGAAGAAAGGAGAGTTT  Raphanus sativus var. oleiformis
FD531896       <-- AGGCAATGCTCCATGTGGTTGCAGGATGGAATGGTAAGAAAGGAGAGTTT  Raphanus raphanistrum subsp. maritimus
EY920527       <-- AGGCAATGCTCCATGTGGTTGCAGGATGGAATGGTAAGAAAGGAGAGTTT  Raphanus raphanistrum subsp. landra
EY931439       --> ..................................................  Raphanus sativus var. oleiformis
EV567292       --> ..................................................  Raphanus raphanistrum subsp. landra
EX886738       --> ..................................................  Raphanus sativus var. oleiformis
EV569051       --> ..................................................  Raphanus raphanistrum subsp. landra
EY923778       --> AGGCAATGCTCCATGTGGTTGCAGGATGGAATGGTAAGAAAGGAGAGTTT  Raphanus raphanistrum subsp. landra
EY924937       --> AGGCAATGCTCCATGTGGTTGCAGGATGGAATGGTAAGAAAGGAGAGTTT  Raphanus raphanistrum subsp. landra
EV566525       --> AGGCAATGCTCCATGTGGTTGCAGGATGGAATGGTAAGAAAGGAGAGTTT  Raphanus raphanistrum subsp. landra
EV539366       --> AGGCAATGCTCCATGTGGTTGCAGGATGGAATGGGAAGAAAGGAGAGTTT  Raphanus raphanistrum subsp. raphanistrum (MS)

               1101   -   1151
UN22664        --> AAGCTGATGGTGAAGAGAAGTATTGCACTAGTGAACAAGTCATGTGAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911088       <-- AAGCTGATGGTGAAGAGAAGTATTGCATTAGTGAACAAGTCATGTGAGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776767       <-- AAGCTGATGGTGAAGAGAAGTATTGCACTAGTGAACAAGTCATGTGAGTT  Raphanus raphanistrum subsp. landra
EV572263       <-- AAGCTGATGGTGAAGAGAAGTATTGCATTAGTGAACAAGTCATGTGAGTT  Raphanus raphanistrum subsp. landra
EY918069       <-- AAGCTGATGGTGAAGAGAAGTATTGCACTAGTGAACAAGTCATGTGAGTT  Raphanus raphanistrum subsp. landra
EX751898       <-- AAGCTGATGGTGAAGAGAAGTATTGCACTAGTGAACAAGTCATGTGAGTT  Raphanus raphanistrum subsp. maritimus
EV573650       <-- AAGCTGATGGTGAAGAGAAGTATTGCATTAGTGAACAAGTCATGTGAGTT  Raphanus raphanistrum subsp. landra
EX891056       <-- AAGCTGATGGTGAAGAGAAGTATTGCACTAGTGAACAAGTCATGTGAGTT  Raphanus sativus var. oleiformis
EY919528       <-- AAGCTGATGGTGAAGAGAAGTATTGCACTAGTGAACAAGTCATGTGAGTT  Raphanus raphanistrum subsp. landra
EX768342       <-- AAGCTGATGGTGAAGAGAAGTATTGCATTAGTGAACAAGTCATGTGAGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571638       <-- AAGCTGATGGTGAAGAGAAGTATTGCACTAGTGAACAAGTCATGTGAGTT  Raphanus raphanistrum subsp. landra
EY927400       <-- AAGCTGATGGTGAAGAGAAGTATTGCACTAGTGAACAAGTCATGTGAGTT  Raphanus sativus var. oleiformis
FD531896       <-- AAGCTGATGGTGAAGAGAAGTATTGCACTAGTGAACAAGTCATGTGAGTT  Raphanus raphanistrum subsp. maritimus
EY920527       <-- AAGCTGATGGTGAAGAGAAGTATTGCACTAGTGAACAAGTCATGTGAGTT  Raphanus raphanistrum subsp. landra
EY931439       --> ..................................................  Raphanus sativus var. oleiformis
EV567292       --> ..................................................  Raphanus raphanistrum subsp. landra
EX886738       --> ..................................................  Raphanus sativus var. oleiformis
EV569051       --> ..................................................  Raphanus raphanistrum subsp. landra
EY923778       --> AAGCTGATGGTGAAGAGAAGTATTGCACTAGTGAACAAGTCATGTGAGTT  Raphanus raphanistrum subsp. landra
EY924937       --> AAGCTGATGGTGAAGAGAAGTATTGCACTAGTGAACAAGTCATGTGAGTT  Raphanus raphanistrum subsp. landra
EV566525       --> AAGCTGATGGTGAAGAGAAGTATTGCACTAGTGAACAAGTCATGTGAGTT  Raphanus raphanistrum subsp. landra
EV539366       --> AAGCTGATGGTGAAGAGAAGTATTGCACTAGTGAACAAGTCATGTGAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)

               1151   -   1201
UN22664        --> CTTGAAAGATGAGTGTTTAGTTCCAGGTTCTTGGTGGGTAGAGAAGAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911088       <-- CTTGAAAGATGAGTGTTTAGTTCCAGGTTCTTGGTGGGTGGAGAAGAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776767       <-- CTTGAAAGATGAGTGTTTAGTTCCAGGTTCTTGGTGGGTAGAGAAGAACA  Raphanus raphanistrum subsp. landra
EV572263       <-- CTTGAAAGATGAGTGTTTAGTTCCAGGTTCTTGGTGGGTGGAGAAGAACA  Raphanus raphanistrum subsp. landra
EY918069       <-- CTTGAAAGATGAGTGTTTAGTTCCAGGTTCTTGGTGGGTAGAGAAGAACA  Raphanus raphanistrum subsp. landra
EX751898       <-- CTTGAAAGATGAGTGTTTAGTTCCAGGTTCTTGGTGGGTAGAGAAGAACA  Raphanus raphanistrum subsp. maritimus
EV573650       <-- CTTGAAAGATGAGTGTTTAGTTCCAGGTTCTTGGTGGGTGGAGAAGAACA  Raphanus raphanistrum subsp. landra
EX891056       <-- TTTGAAAGATGAGTGTTTAGTTCCAGGTTCTTGGTGGGTGGAGAAGAACA  Raphanus sativus var. oleiformis
EY919528       <-- CTTGAAAGATGAGTGTTTAGTTCCAGGTTCTTGGTGGGTAGAGAAGAACA  Raphanus raphanistrum subsp. landra
EX768342       <-- CTTGAAAGATGATTGTTTAGTTCCAGGTTCTTGGTGGGTGGAGAAGAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571638       <-- CTTGAAAGATGAGTGTTTAGTTCCAGGTTCTTGGTGGGTAGAGAAGAACA  Raphanus raphanistrum subsp. landra
EY927400       <-- TTTGAAAGATGAGTGTTTAGTTCCAGGTTCTTGGTGGGTGGAGAAGAACA  Raphanus sativus var. oleiformis
FD531896       <-- CTTGAAAGATGAGTGTTTAGTTCCAGGTTCTTGGTGGGTAGAGAAGAACA  Raphanus raphanistrum subsp. maritimus
EY920527       <-- CTTGAAAGATGAGTGTTTAGTTCCAGGTTCTTGGTGGGTAGAGAAGAACA  Raphanus raphanistrum subsp. landra
EY931439       --> ..................................................  Raphanus sativus var. oleiformis
EV567292       --> ..................................................  Raphanus raphanistrum subsp. landra
EX886738       --> ..................................................  Raphanus sativus var. oleiformis
EV569051       --> ..................................................  Raphanus raphanistrum subsp. landra
EY923778       --> CTTGAAAGATGAGTGTTTAGTTCCAGGTTCTTGGTGGGTAGAGAAGAACA  Raphanus raphanistrum subsp. landra
EY924937       --> CTTGAAAGATGAGTGTTTAGTTCCAGGTTCTTGGTGGGTAGAGAA.....  Raphanus raphanistrum subsp. landra
EV566525       --> CTTGAAAGATGAGTGTTTAGTTCCAGGTTCTTGGTGGGTAGAGAAGAACA  Raphanus raphanistrum subsp. landra
EV539366       --> CTTGAAAGATGAGTGTTTAGTTCCAGGTTCTTGGTGGGTAGAGAAGAACA  Raphanus raphanistrum subsp. raphanistrum (MS)

               1201   -   1251
UN22664        --> AAGGAATGATCAAGGATGAAAATGGTGAATGGGTCATTGCTGCAGTTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911088       <-- AAGGAATGGTCAAGGATGAAAATGGTGAATGGGTCATTGCTGCAGTTGAA
EX776767       <-- AAGGAATGATCAAGGATGAAAATGGTGAATGGGTCATTGCTGCAGTTGAA
EV572263       <-- AAGGAATGATCAAGGATGAAAATGGTGAATGGGTCATTGCTGCAGTTGAA
EY918069       <-- AAGGAATGATCAAGGATGAAAATGGTGAATGGGTCATTGCTGCAGTTGAA
EX751898       <-- AAGGAATGATCAAGGATGAAAATGGTGAATGGGTCATTGCTGCAGTTGAA
EV573650       <-- AAGGAATGATCAAGGATGAAAATGGTGAATGGGTCATTGCTGCAGTTGAA
EX891056       <-- AAGGAATGATCAAGGATGAAAATGGTGAATGGGTCATTGCTGCAGTTGAA
EY919528       <-- AAGGAATGATCAAGG--AAAAATGGTGAATGGGTCATTGCTGCAGTTGAA
EX768342       <-- AAGGAATGGTCAAGGATGAAAATGGTGAATGGGTCATTGCTGCAGTTGAA
EV571638       <-- AAGGAATGATCAAGGATGAAAATGGTGAATGGGTCATTGCTGCAGTTGAA
EY927400       <-- AAGGAATGATCAAGGATGAAAATGGTGAATGGGTCATTGCTGCAGTTGAA
FD531896       <-- AAGGAATGATCAAGGATGAAAATGGTGAATGGGTCATTGCTGCAGTTGAA
EY920527       <-- AAGGAATGATCAAGG--AAAAATGGTGAATGGGTCATTGCTGCAGTTGAA
EY931439       --> ..................................................
EV567292       --> ..................................................
EX886738       --> ..................................................
EV569051       --> ..................................................
EY923778       --> AAGGAATGATCAAGa...................................
EY924937       --> ..................................................
EV566525       --> AAGGAATGATCAAGGATGAAAATGGTGAATGGGTCATTGCTGCAGTTGAA
EV539366       --> AAGGAATGATCAAGGATGAAAATGGTGAATGGGTCATTGCTGCAGTTGAA

               1251   -   1301
UN22664        --> GAAGAACCTGAACCTGAATTCTAAGGTGGATTTGTTTATGTATCATGTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911088       <-- GAAGAACCTGAACCTGAATTTTAAGGTGGATTTGTTTATGTATCATGTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776767       <-- GAAGAACCTGAACCTGAATTTTAAGGTGGATTTGTTTATGTATCATGTTA  Raphanus raphanistrum subsp. landra
EV572263       <-- GAAGAACCTGAACCTGAATTCTAAGGTGGATTTGTTTATGTATCATGTTA  Raphanus raphanistrum subsp. landra
EY918069       <-- GAAGAACCTGAACCTGAATTCTAAGGTGGATTTGTTTATGTATCATGTTA  Raphanus raphanistrum subsp. landra
EX751898       <-- GAAGAACCTGAACCTGAATTTTAAGGTGGATTTGTTTATGTATCATGTTA  Raphanus raphanistrum subsp. maritimus
EV573650       <-- GAAGAACCTGAACCTGAATTCTAAGGTGGATTTGTTTATGTATCATGTTA  Raphanus raphanistrum subsp. landra
EX891056       <-- GAAGAACCTGAACCTGAATTCTAAGGTGGATTTGTTTATGTATCATGTTA  Raphanus sativus var. oleiformis
EY919528       <-- GAAGAACCTGAACCTGAATTCTAAGGTGGATTTGTTTATGTATCATGTTA  Raphanus raphanistrum subsp. landra
EX768342       <-- GAAGAACCTGAACCTGAATTCTAAGGTGGATTTGTTTATGTATCATGTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571638       <-- GAAGAACCTGAACCTGAATTTTAAGGTGGATTTGTTTATGTATCATGTTA  Raphanus raphanistrum subsp. landra
EY927400       <-- GAAGAACCTGAACCTGAATTCTAAGGTGGATTTGTTTATGTATCATGTTA  Raphanus sativus var. oleiformis
FD531896       <-- GAAGAACCTGAACCTGAATTTTAAGGTGGATTTGTTTATGTATCATGTTA  Raphanus raphanistrum subsp. maritimus
EY920527       <-- GAAGAACCTGAACCTGAATTTTAAGGTGGATTTGTTTATGTATCATGTTA  Raphanus raphanistrum subsp. landra
EY931439       --> ..................................................  Raphanus sativus var. oleiformis
EV567292       --> ..................................................  Raphanus raphanistrum subsp. landra
EX886738       --> ..................................................  Raphanus sativus var. oleiformis
EV569051       --> ..................................................  Raphanus raphanistrum subsp. landra
EY923778       --> ..................................................  Raphanus raphanistrum subsp. landra
EY924937       --> ..................................................  Raphanus raphanistrum subsp. landra
EV566525       --> GAAGAACCTGAACCTGAATTCTAAGGTGGATTTGTTTATGTATCATGTTA  Raphanus raphanistrum subsp. landra
EV539366       --> GAAGAACCTGAACCTGAATTCTAAGGTGGATTTGTTTATGTATCATGTTA  Raphanus raphanistrum subsp. raphanistrum (MS)

               1301   -   1351
UN22664        --> ATCTACAATAAAAGAAGCTCTTGTGTGTGTGT--TGAGAAAAGAACCTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911088       <-- ATCTACAATAAAAGAAGCTCTTGTGTGTGTGTGTTGAAAAAAGAACCTAA
EX776767       <-- ATCTACAATAAAAGAAGCTCTTGTGTGTGTGT--TGAGAAAAGAACCTAA
EV572263       <-- ATCTACAATAAAAGAAGCTCTTGTGTGTG--T--TGAGAAAAGAACCTAA
EY918069       <-- ATCTACAATAAAAGAAGCTCTTGTGTGTGTGT--TGAGAAAAGAACCTAA
EX751898       <-- ATCTACAATAAAAGAAGCTCTTGTGTGTGTGT--TGAGAAAAGAACCTAA
EV573650       <-- ATCTACAATAAAAGAAGCTCTTGTGTGTGTGT--TGAGAAAAGAACCTAA
EX891056       <-- ATCTACAATAAAAGAAGCTCTTGTGTGTGTGT--TGAG............
EY919528       <-- ATCTACAATAAAAGAAGCTCTTGTGTGTGTGT--TGAGAAAAGAACCTAA
EX768342       <-- ATCTACAATAAAAGAAGCTCTTGTGTGTGTGTGTTGAAAAAAGAACCTAA
EV571638       <-- ATCTACAATAAAAGAAGCTCTTGTGTGTGTGT--TGAGAAAAGAACCTAA
EY927400       <-- ATCTACAATAAAAGAAGCTCTTGTGTGTGTGT--TGAGAAAAGAACCTAA
FD531896       <-- ATCTACAATAAAAGAAGCTCTTGTGTGTGTGT--TGAGAAAAGAACCTAA
EY920527       <-- ATCTACAATAAAAGAAGCTCTTGTGTGTGTGT--TGAGAAAAGAACCTAA
EY931439       --> ..................................................
EV567292       --> ..................................................
EX886738       --> ..................................................
EV569051       --> ..................................................
EY923778       --> ..................................................
EY924937       --> ..................................................
EV566525       --> ATCTACAATAAAAGAAGCTCTTGTGTGTGTGT--TGAGAAAAGAACCTAA
EV539366       --> ATCTACAATGAAAGAAGCTCTTGTGTGTGTGTGTTGAGATAAGAACCTAA

               1351   -   1401
UN22664        --> GTTATTTTTATATTTGATATGTGTTATGAAAAAA-GTGTTTCATCTACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911088       <-- GTTATTTTTATATTTGATATGTGTTATG......................
EX776767       <-- GTTATTTTTATATTTGATATGTGTTATG......................
EV572263       <-- GTTATTTTTATATTTGATATGTGTTATGAAAAAA-GTGTTTCATCTACCA
EY918069       <-- GTTATTTTTATATTTGATATGTGTTATGAAAAAA-GTGTTTCATCTACC.
EX751898       <-- GTTATTTTTATATTTGATATGTGTTATG......................
EV573650       <-- GTTATTTTTATATTTGATATGTGTTATGAAAAAA-GTGTTTCATCTACC.
EX891056       <-- ..................................................
EY919528       <-- GTTATTTTTATATTTGATATGTGTTATGAAAAAA-GTGTTTCATCCACCA
EX768342       <-- GTTATTTTTATATTTGATATGTGTTATGAAAAAA-GTGTTTCATCTACCA
EV571638       <-- GTTATTTTTATATTTGATATGTGTTATG......................
EY927400       <-- GTTATTTTTATATTAGATATGTGTTATGAAAAAAAGTGTTTCATCGACC.
FD531896       <-- GTTATTTTTATATTTGATATGTGTTATGAAAAAA-GTGTTTCATCTACCA
EY920527       <-- GTTATTTTTATATTTGATATGTGTTATGAAAAAA-GTGTTTCATCCACCA
EY931439       --> ..................................................
EV567292       --> ..................................................
EX886738       --> ..................................................
EV569051       --> ..................................................
EY923778       --> ..................................................
EY924937       --> ..................................................
EV566525       --> GTTATTTTTATATTTGATATGTGTTATG......................
EV539366       --> GTTATTTTTATATTTGATATGTGTTATGAAAAAA-GTGTTTCATCTACCA

               1401   -   1451
UN22664        --> GACATTCAAACGTTTTTATCTTTCTTACATGGAAGCATTGATTGTTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911088       <-- .................................................
EX776767       <-- .................................................
EV572263       <-- GACATTCAAACGTTTT.................................
EY918069       <-- .................................................
EX751898       <-- .................................................
EV573650       <-- .................................................
EX891056       <-- .................................................
EY919528       <-- GAC..............................................
EX768342       <-- GACATTCGAACGTTTTTATCTTTCTTACATGGAAGCATTGATTGTTGTT
EV571638       <-- .................................................
EY927400       <-- .................................................
FD531896       <-- GACATTCAAACGTTTTTATCTct..........................
EY920527       <-- GAC..............................................
EY931439       --> .................................................
EV567292       --> .................................................
EX886738       --> .................................................
EV569051       --> .................................................
EY923778       --> .................................................
EY924937       --> .................................................
EV566525       --> .................................................
EV539366       --> GACATTCAAACGTTTTTATCTTTCTT.......................