RadishBase

| | | |
Alignment for radish unigene UN22669

               1      -     51
UN22669        --> CAGTGATGCAATTGAGTCCTTTATCCGAGCTGATGATGCCACTCATTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- ..................................................
EX759235       <-- ..................................................
FD934742       <-- ..................................................
FD975937       <-- ..................................................
FD575918       <-- ..................................................
FD537714       <-- ..................................................
FD968328       <-- ..................................................
FD567213       <-- ..................................................
EW718250       --> CAGTGATGCAATTGAGTCCTTTATCCGAGCTGATGATGCCACTCATTTCC
FD541430       --> ..................................................
FD572239       --> ..................................................
EX905599       --> ..................................................
EV548510       --> ..................................................
FD979971       --> ..................................................
FD972434       --> ..................................................
EX755066       --> ..................................................
FD938340       --> ..................................................

               51     -    101
UN22669        --> TAGAGGTCATCCGGGCCGCTGAAGATACTAATGTTTATGATGACTTGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- ..................................................
EX759235       <-- ..................................................
FD934742       <-- ..................................................
FD975937       <-- ..................................................
FD575918       <-- ..................................................
FD537714       <-- ..................................................
FD968328       <-- ..................................................
FD567213       <-- ..................................................
EW718250       --> TAGAGGTCATCCGGGCCGCTGAAGATACTAATGTTTATGATGACTTGGTC
FD541430       --> ..................................................
FD572239       --> ..................................................
EX905599       --> ..................................................
EV548510       --> ..................................................
FD979971       --> ..................................................
FD972434       --> ..................................................
EX755066       --> ..................................................
FD938340       --> ..................................................

               101    -    151
UN22669        --> AGATACCTTCTTATGGTTAGACAGAAGGTGAAGGAACCCAAGGTTGACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- ..................................................
EX759235       <-- ..................................................
FD934742       <-- ..................................................
FD975937       <-- ..................................................
FD575918       <-- ..................................................
FD537714       <-- ..................................................
FD968328       <-- ..................................................
FD567213       <-- ..................................................
EW718250       --> AGATACCTTCTTATGGTTAGACAGAAGGTGAAGGAACCCAAGGTTGACAG
FD541430       --> ..................................................
FD572239       --> ..................................................
EX905599       --> ..................................................
EV548510       --> ..................................................
FD979971       --> ..................................................
FD972434       --> ..................................................
EX755066       --> ..................................................
FD938340       --> ..................................................

               151    -    201
UN22669        --> TGAGCTCATCTATGCTTATGCAAAGATTGAAAGGTTGGGTGAGATAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- ..................................................
EX759235       <-- ..................................................
FD934742       <-- ..................................................
FD975937       <-- ..................................................
FD575918       <-- ..................................................
FD537714       <-- ..................................................
FD968328       <-- ..................................................
FD567213       <-- ..................................................
EW718250       --> TGAGCTCATCTATGCTTATGCAAAGATTGAAAGGTTGGGTGAGATAGAAG
FD541430       --> ..................................................
FD572239       --> ..................................................
EX905599       --> ..................................................
EV548510       --> ..................................................
FD979971       --> ..................................................
FD972434       --> ..................................................
EX755066       --> ..................................................
FD938340       --> ..................................................

               201    -    251
UN22669        --> AATTTATTCTGATGCCAAACGTTGCTAACCTACCAAATGTGGGTGATCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- ..................................................
EX759235       <-- ..................................................
FD934742       <-- ..................................................
FD975937       <-- ..................................................
FD575918       <-- ..................................................
FD537714       <-- ..................................................
FD968328       <-- ..................................................
FD567213       <-- ..................................................
EW718250       --> AATTTATTCTGATGCCAAACGTTGCTAACCTACCAAATGTGGGTGATCGC
FD541430       --> ..................................................
FD572239       --> ..................................................
EX905599       --> ..................................................
EV548510       --> ..................................................
FD979971       --> ..................................................
FD972434       --> ..................................................
EX755066       --> ..................................................
FD938340       --> ..................................................

               251    -    301
UN22669        --> CTGTATGACGAAGCTCTGTATGAAGCTGCAAAAATAATTTATGCGTTCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- ..................................................
EX759235       <-- ..................................................
FD934742       <-- ..................................................
FD975937       <-- ..................................................
FD575918       <-- ..................................................
FD537714       <-- ..................................................
FD968328       <-- ..................................................
FD567213       <-- ..................................................
EW718250       --> CTGTATGACGAAGCTCTGTATGAAGCTGCAAAAATAATTTATGCGTTCAC
FD541430       --> ..................................................
FD572239       --> ..................................................
EX905599       --> ..................................................
EV548510       --> ..................................................
FD979971       --> ..................................................
FD972434       --> ..................................................
EX755066       --> ..................................................
FD938340       --> ..................................................

               301    -    351
UN22669        --> ATCGAACTGGGCCAAGTTAGCCGTCACACTTGTGAAGTTGCAGCAGTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- ..................................................
EX759235       <-- ..................................................
FD934742       <-- ..................................................
FD975937       <-- ..................................................
FD575918       <-- ..................................................
FD537714       <-- ..................................................
FD968328       <-- ..................................................
FD567213       <-- ..................................................
EW718250       --> ATCGAACTGGGCCAAGTTAGCCGTCACACTTGTGAAGTTGCAGCAGTTCC
FD541430       --> ..................................................
FD572239       --> ..................................................
EX905599       --> ..................................................
EV548510       --> ..................................................
FD979971       --> ..................................................
FD972434       --> ..................................................
EX755066       --> ..................................................
FD938340       --> ..................................................

               351    -    401
UN22669        --> AGAGTGCTGTTGATGCTGCAAGGAAAGCAAACAGCGCAAAGACATGGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- ..................................................
EX759235       <-- ..................................................
FD934742       <-- ..................................................
FD975937       <-- ..................................................
FD575918       <-- ..................................................
FD537714       <-- ..................................................
FD968328       <-- ..................................................
FD567213       <-- ..................................................
EW718250       --> AGAGTGCTGTTGATGCTGCAAGGAAAGCAAACAGCGCAAAAACATGGAAG
FD541430       --> ................................gGCGCAAAGACATGGAAG
FD572239       --> ..........................................CATGGAAG
EX905599       --> ..................................................
EV548510       --> ..................................................
FD979971       --> ..................................................
FD972434       --> ..................................................
EX755066       --> ..................................................
FD938340       --> ..................................................

               401    -    451
UN22669        --> GAAGTTTGCTTTGCTTGTGTTGATGCTGAAGAATTCCGGCTGGCTCAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- ..................................................
EX759235       <-- ..................................................
FD934742       <-- ..................................................
FD975937       <-- ..................................................
FD575918       <-- ..................................................
FD537714       <-- ..................................................
FD968328       <-- ..................................................
FD567213       <-- ..................................................
EW718250       --> GAAGTTTGCTTTGCTTGTGTTGATGCTGAAGAATTCCGGCTGGCTCAAAT
FD541430       --> GAAGTTTGCTTTGCTTGTGTTGATGCTGAAGAATTCCGGCTGGCTCAAAT
FD572239       --> GAAGTTTGCTTTGCTTGTGTTGATGCTGAAGAATTCCGGCTGGCTCAAAT
EX905599       --> ..................................................
EV548510       --> ..................................................
FD979971       --> ..................................................
FD972434       --> ..................................................
EX755066       --> ..................................................
FD938340       --> ..................................................

               451    -    501
UN22669        --> ATGTGGACTTAACATTATCATACAGGTGGATGACTTGGAAGAAGTTAGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- ..................................................
EX759235       <-- ..................................................
FD934742       <-- ..................................................
FD975937       <-- ..................................................
FD575918       <-- ..................................................
FD537714       <-- ..................................................
FD968328       <-- ..................................................
FD567213       <-- ..................................................
EW718250       --> ATGTGGACTTAACATTATCATACAGGTGGATGACTTGGAAGAAGTTAGCG
FD541430       --> ATGTGGACTTAACATTATCATACAGGTGGATGACTTGGAAGAAGTTAGCG
FD572239       --> ATGTGGACTTAACATTATCATACAGGTGGATGACTTGGAAGAAGTTAGCG
EX905599       --> ..................................................
EV548510       --> ..................................................
FD979971       --> ..................................................
FD972434       --> ..................................................
EX755066       --> ..................................................
FD938340       --> ..................................................

               501    -    551
UN22669        --> AGTACTACCAAAACAGAGGATGCTTCAATGAATTAATCTCACTGATGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- ..................................................
EX759235       <-- ..................................................
FD934742       <-- ..................................................
FD975937       <-- ..................................................
FD575918       <-- ..................................................
FD537714       <-- ..................................................
FD968328       <-- ..................................................
FD567213       <-- ..................................................
EW718250       --> AGTACTACCAAAACAGAGGATGCTTCAATGAATTAATCTCACTGATGGAG
FD541430       --> AGTACTACCAAAACAGAGGATGCTTCAATGAATTAATCTCACTGATGGAG
FD572239       --> AGTACTACCAAAACAGAGGATGCTTCAATGAATTAATCTCACTGATGGAG
EX905599       --> ..................................................
EV548510       --> ..................................................
FD979971       --> ..................................................
FD972434       --> ..................................................
EX755066       --> ..................................................
FD938340       --> ..................................................

               551    -    601
UN22669        --> AGTGGACTTGGTCTGGAACGGGCTCTCATGGGGATCTTCACCGAGTTGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- ..................................................
EX759235       <-- ..................................................
FD934742       <-- ..................................................
FD975937       <-- ..................................................
FD575918       <-- ..................................................
FD537714       <-- ..................................................
FD968328       <-- ..................................................
FD567213       <-- ..................................................
EW718250       --> AGTGGACTTGGTCTGGAACGGGCTCTCATGGGGATCTTCACCGAGTTGGG
FD541430       --> AGTGGACTTGGTCTGGAACGGGCTCCCATGGGGATCTTCACCGAGTTGGG
FD572239       --> AGTGGACTTGGTCTGGAACGGGCTCACATGGGGATCTTCACCGAGTTGGG
EX905599       --> ..................................................
EV548510       --> ..................................................
FD979971       --> ..................................................
FD972434       --> ..................................................
EX755066       --> ..................................................
FD938340       --> ..................................................

               601    -    651
UN22669        --> TGTACTGTACGCCAGATATCGCTATGAGAAGCTTATGGAACACATCAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- ..................................................
EX759235       <-- ..................................................
FD934742       <-- ..................................................
FD975937       <-- ..................................................
FD575918       <-- ..................................................
FD537714       <-- ..................................................
FD968328       <-- ..................................................
FD567213       <-- ..................................................
EW718250       --> TGTACTGTACGCCAGATATCGCTATGAGAAGCTTATGGA-CACATCAAGT
FD541430       --> TGTACTGTACGCCAGATATCGCTATGAGAAGCTTATGGAACACATCAAGT
FD572239       --> TGTACTGTACGCCAGATATCGCTATGAGAAGCTTATGGAACACATCAAGT
EX905599       --> .....................................GAACACATCAAGT
EV548510       --> ............................................gCAAGT
FD979971       --> ..................................................
FD972434       --> ..................................................
EX755066       --> ..................................................
FD938340       --> ..................................................

               651    -    701
UN22669        --> TGTTCTCGACTCGCCTCAATATTCCCAAGCTTATACGTGCATGTGATGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- ..................................................
EX759235       <-- ..................................................
FD934742       <-- ..................................................
FD975937       <-- ..................................................
FD575918       <-- ..................................................
FD537714       <-- ..................................................
FD968328       <-- ..................................................
FD567213       <-- ..................................................
EW718250       --> TGTTCTCGACTCGCCTCA-TATTCC-AAGCTTATACGTGCATGTGATGAG
FD541430       --> TGTTCTCGACTCGCCTCAATATTCCCAAGCTTATACGTGCATGTGATGAG
FD572239       --> TGTTCTCGACTCGCCTCAATATTCCCAAGCTTATACGTGCATGTGATGAG
EX905599       --> TGTTCTCGACTCGCCTCAATATTCCCAAGCTTATACGTGCATGTGATGAG
EV548510       --> TGTTCTCGACTCGCCTCAATATTCCCAAGCTTATACGTGCATGTGATGAG
FD979971       --> ..................................................
FD972434       --> ..................................................
EX755066       --> ..................................................
FD938340       --> ..................................................

               701    -    751
UN22669        --> CAACAGCATTGGCAGGAACTTACCTATCTTTACATTCAGTATGATGAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- ..................................................
EX759235       <-- ..................................................
FD934742       <-- ..................................................
FD975937       <-- ..................................................
FD575918       <-- ..................................................
FD537714       <-- ..................................................
FD968328       <-- ..................................................
FD567213       <-- ..................................................
EW718250       --> CA-CAGCATTGGCAGGA-CTTAC-TATCTTTACATTCAGTATGATGAGTT
FD541430       --> CAACAGCATTGGCAGGAACTTACCTATCTTTACATTCAGTATGATGAGTT
FD572239       --> CAACAGCATTGGCAGGAACTTACCTATCTTTACATTCAGTATGATGAGTT
EX905599       --> CAACAGCATTGGCAGGAACTTACCTATCTTTACATTCAGTATGATGAGTT
EV548510       --> CAACAGCATTGGCAGGAACTTACCTATCTTTACATTCAGTATGATGAGTT
FD979971       --> ..................................................
FD972434       --> ..................................................
EX755066       --> ..................................................
FD938340       --> ..................................................

               751    -    801
UN22669        --> TGACAACGCTGCAACCACTGTCATGAACCATTCTCCTGAAGCATGGGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- ..................................................
EX759235       <-- ..................................................
FD934742       <-- ..................................................
FD975937       <-- ..................................................
FD575918       <-- ..................................................
FD537714       <-- ..................................................
FD968328       <-- ..................................................
FD567213       <-- ..................................................
EW718250       --> TGACA-CGCTGCA-CCACTGTCATGAccatctcaaagcatgg........
FD541430       --> TGACAACGCTGCAACCACTGTCATGAACCATTCTCCTGAAGCATGGGAGC
FD572239       --> TGACAACGCTGCAACCACTGTCATGAACCGTTCTCCTGAAGCATGGGAGC
EX905599       --> TGACAACGCTGCAACCACTGTCATGAACCATTCTCCTGAAGCATGGGAGC
EV548510       --> TGACAACGCTGCAACCACTGTCATGAACCATTCTCCTGAAGCATGGGAGC
FD979971       --> ..................................................
FD972434       --> ..................................................
EX755066       --> ..................................................
FD938340       --> ..................................................

               801    -    851
UN22669        --> ACATGCAATTCAAAGACATTGTCGCCAAGGTTGCGAATGTCGAGCTTTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- ..................................................
EX759235       <-- ..................................................
FD934742       <-- ..................................................
FD975937       <-- ..................................................
FD575918       <-- ..................................................
FD537714       <-- ..................................................
FD968328       <-- ..................................................
FD567213       <-- ..................................................
EW718250       --> ..................................................
FD541430       --> ACATGCAATTCAAAGACATTGTCGCCAAGGTTGCGAATGTCGAGCTTTAC
FD572239       --> ACATGCAATTCAAAGACATTGTCGCCAAGGTTGCGAATGTCGAGCTTTAC
EX905599       --> ACATGCAATTCAAAGACATTGTCGCCAAGGTTGCGAATGTCGAGCTTTAC
EV548510       --> ACATGCAGTTCAAAGACATTGTCGCCAAGGTTGCGAATGTCGAGCTTTAC
FD979971       --> ..................................................
FD972434       --> ..................................................
EX755066       --> ..................................................
FD938340       --> ..................................................

               851    -    901
UN22669        --> TACAAGGCCGTTCACTTCTACTTGCAAGAGCACCCTGATATAATCAACGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- ..................................................
EX759235       <-- ..................................................
FD934742       <-- ..................................................
FD975937       <-- ..................................................
FD575918       <-- ..................................................
FD537714       <-- ..................................................
FD968328       <-- ..................................................
FD567213       <-- ..................................................
EW718250       --> ..................................................
FD541430       --> TACAAGGCCGTTCACTTCTACTTGCAAGAGCACCCTGATATAATCAACGA
FD572239       --> TACAAGGCCGTTCACTTCTACTTGCAAGAGCACCCTGATATAATCAACGA
EX905599       --> TACAAGGCCGTTCACTTCTACTTGCAAGAGCACCCTGATATAATCAACGA
EV548510       --> TACAAGGCCGTTCACTTCTACTTGCAAGAGCACCCTGGTATAATCAACGA
FD979971       --> ........................gAAGAGCACCCTGATATAATCAACGA
FD972434       --> ..................................gTGATATAATCAACGA
EX755066       --> ............................................gAACGA
FD938340       --> ..................................................

               901    -    951
UN22669        --> TCTTCTCAATGTGCTTGCTCTGCGGTTAGACCACACACGTGTCGTTGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- ..................................................
EX759235       <-- ..................................................
FD934742       <-- ..................................................
FD975937       <-- ..................................................
FD575918       <-- ..................................................
FD537714       <-- ..................................................
FD968328       <-- ..................................................
FD567213       <-- ..................................................
EW718250       --> ..................................................
FD541430       --> TCTTCTCAATGTGCTTGCTCTGCGGTTAGACCACACACGTGTCGTTGATA
FD572239       --> TCTTCTCAATGTGCTTGCTCTGCGGTTAGACCACACACGTGTCGTTGATA
EX905599       --> TCTTCTCAATGTGCTTGCTCTGCGGTTAGACCACACACGTGTCGTTGATA
EV548510       --> TCTTCTCAATGTGCTTGCTCTGCGGTTAGACCACACACGTGTCGTTGATA
FD979971       --> TCTTCTCAATGTGCTTGCTCTGCGGTTAGACCACACACGTGTCGTTGATA
FD972434       --> TCTTCTCAATGTGCTTGCTCTGCGGTTAGACCACACACGTGTCGTTGATA
EX755066       --> TCTTCTCAATGTGCTTGCTCTGCGGTTAGACCACACACGTGTCGTTGATA
FD938340       --> ..................................................

               951    -   1001
UN22669        --> TTATGCGAAAGGCTGGTCAGTTGCGCCTTATTAAGCCGTACATGGTTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- ..................................................  Raphanus sativus var. oleiformis
EX759235       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD934742       <-- ..................................................  Raphanus sativus var. oleiformis
FD975937       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD575918       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD537714       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968328       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD567213       <-- ..................................................  Raphanus sativus var. oleiformis
EW718250       --> ..................................................  Raphanus sativus var. oleiformis
FD541430       --> TTATGCGCAAGGCTGGTCAGTTGCGCCTTATTAAGCCGTACATGGTTGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD572239       --> TTATGCGAAAGGCTGGTCAGTTGCGCCTTATTAAGCCGTACATGGTTGCA  Raphanus sativus cv Early Scarlet Globe
EX905599       --> TTATGCGAAAGGCTGGTCAGTTGCGCCTTATTAAGCCGTACATGGTTGCA  Raphanus sativus cv Rat-Tail Radish #3870
EV548510       --> TTATGCGAAAGGCTGGTCAGTTGCGCCTTATTAAGCCGTACATGGTTGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979971       --> TTATGCGAAAGGCTGGTCAGTTGCGCCTTATTAAGCCGTACATGGTTGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD972434       --> TTATGCGCAAGGCTGGTCAGTTGCGCCTTATTAAGCCGTACATGGTTGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755066       --> TTATGCGCAAGGCTGGTCAGTTGCGCCTTATTAAGCCGTACATGGTTGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD938340       --> ..................................................  Raphanus sativus var. oleiformis

               1001   -   1051
UN22669        --> GTTCAGAGCAACAATGTTTCTGCTGTAAATGAAGCTCTGAATGAGATATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- ..................................................
EX759235       <-- ..................................................
FD934742       <-- ..................................................
FD975937       <-- ..................................................
FD575918       <-- ..................................................
FD537714       <-- ..................................................
FD968328       <-- ..................................................
FD567213       <-- ..................................................
EW718250       --> ..................................................
FD541430       --> GTTCAGAGCAACAATGTTTCTGCTGTAAATGAAGCTCTGAATGAGATATA
FD572239       --> GTTCAGAGCAACAATGTTTCTGCTGTAA-TGAAGCTCTGAATGAGATATA
EX905599       --> GTTCAGAGCAACAATGTTTCTGCTGTAA-TGAAGCTCTGAATGAGATATA
EV548510       --> GTTCAGAGCAACAATGTTTCTGCTGTAAATGAAGCTCTGAATGAGATATA
FD979971       --> GTTCAGAGCAACAATGTTTCTGCTGTAAATGAAGCTCTGAATGAGATATA
FD972434       --> GTTCAGAGCAACAATGTTTCTGCTGTAAATGAAGCTCTGAATGAGATATA
EX755066       --> GTTCAGAGCAACAATGTTTCTGCTGTAAATGAAGCTCTGAATGAGATATA
FD938340       --> ................................gGCTCTGAATGAGATATA

               1051   -   1101
UN22669        --> CGTAGAGGAAGAAGACTATGACAGGTTGCGCGAGTCTACTGATTTGCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- ..................................................  Raphanus sativus var. oleiformis
EX759235       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD934742       <-- ..................................................  Raphanus sativus var. oleiformis
FD975937       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD575918       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD537714       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968328       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD567213       <-- ..................................................  Raphanus sativus var. oleiformis
EW718250       --> ..................................................  Raphanus sativus var. oleiformis
FD541430       --> CGTAGAAGAAGAAGACTATGACAG-TTGCGCGAGTCTACTGATTTGCATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD572239       --> CGTAGAGG..........................................  Raphanus sativus cv Early Scarlet Globe
EX905599       --> CGTAGAGGAAGAAGACTATGACAGGTTGCGCGAGTCTACTGATTTGCATG  Raphanus sativus cv Rat-Tail Radish #3870
EV548510       --> CGTAGAGGAAGAAGACTATGACAGGTTGCGCGAGTCTACTGATTTGCATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979971       --> CGTAGAGGAAGAAGACTATGACAGGTTGCGCGAGTCTACTGATTTGCATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD972434       --> CGTAGAAGAAGAAGACTATGACAGGTTGCGCGAGTCTACTGATTTGCATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755066       --> CGTAGAAGAAGAAGACTATGACAGGTTGCGCGAGTCTACTGATTTGCATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD938340       --> CGTAGAGGAAGAAGACTATGACAGGTTGCGCGAGTCTACTGATTTGCATG  Raphanus sativus var. oleiformis

               1101   -   1151
UN22669        --> ACAGCTTTGACCAGATAGGCCTCGCTCAGAAGATTGAGAAACACGAGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- ..................................................
EX759235       <-- ..................................................
FD934742       <-- ..................................................
FD975937       <-- ..................................................
FD575918       <-- ..................................................
FD537714       <-- ..................................................
FD968328       <-- ..................................................
FD567213       <-- ..................................................
EW718250       --> ..................................................
FD541430       --> ACAGCTTTGACCAGATAGGC-TCGCTCAGA-GA-TGAGAAACACGAGCTC
FD572239       --> ..................................................
EX905599       --> ACAGCTTTGACCAGATAGGCCTCGCTCAGAAGATTGAGAAACACGAGCTC
EV548510       --> ACAGCTTTGACCAGATAGGCCTCGCTCAGAAGATTGAGAAACACGAGCTC
FD979971       --> ACAGCTTTGACCAGATAGGCCTCGCTCAGAAGATTGAGAAACACGAGCTC
FD972434       --> ACAGCTTTGACCAGATAGGCCTCGCTCAGAAGATTGAGAAACACGAGCTC
EX755066       --> ACAGCTTTGACCAGATAGGCCTCGCTCAGAAGATTGAGAAACACGAGCTC
FD938340       --> ACAGCTTTGACCAGATAGGCCTCGCTCAGAAGATTGAGAAACACGAGCTC

               1151   -   1201
UN22669        --> GTGGAAATGAGACGTGTAGCTGCGTATATCTACAAGAAAGCTGGTAGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- ..................................................
EX759235       <-- ..................................................
FD934742       <-- ..................................................
FD975937       <-- ..................................................
FD575918       <-- ..................................................
FD537714       <-- ..................................................
FD968328       <-- ..................................................
FD567213       <-- ..................................................
EW718250       --> ..................................................
FD541430       --> GTGGAAATGAGACGTGT-GCTGCGTATATCTACA-GAAAGCTGGTAGATG
FD572239       --> ..................................................
EX905599       --> GTGGAAATGAGACGTGTAGCTGCGTATATCTACAAGAAAGCTGGTAGATG
EV548510       --> GTGGAAATGAGACGTGTAGCTGCGTATATCTACAAGAAAGCTGGTAGATG
FD979971       --> GTGGAAATGAGACGTGTAGCTGCGTATATCTACAAGAAAGCTGGTAGATG
FD972434       --> GTGGAAATGAGACGTGTGGCTGCGTATATCTACAAGAAAGCTGGTAGATG
EX755066       --> GTGGAAATGAGACGTGTGGCTGCGTATATCTACAAGAAAGCTGGTAGATG
FD938340       --> GTGGAAATGAGACGTGTAGCTGCGTATATCTACAAGAAAGCTGGTAGATG

               1201   -   1251
UN22669        --> GAAGCAATCAATTGCTTTGTCGAAGAAAGATAACATGTACAAGGACTGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- ...............................AACATGTACAAGGACTGTA
EX759235       <-- ..................................................
FD934742       <-- ..................................................
FD975937       <-- ..................................................
FD575918       <-- ..................................................
FD537714       <-- ..................................................
FD968328       <-- ..................................................
FD567213       <-- ..................................................
EW718250       --> ..................................................
FD541430       --> G.................................................
FD572239       --> ..................................................
EX905599       --> GAAGCAATCAATTGCTTTGTCGAAGAAAGATAACATGTACAAGGACTGTA
EV548510       --> GAAGCAATCAATTGCTTTGTCGAAGAAAGATAACATGTACAAGGACTGTA
FD979971       --> GAAGCAATCAATTGCTTTGTCGAAGAAAGATAACATGTACAAGGACTGTA
FD972434       --> GAAGCAATCAATTGCTTTGTCGAAGAAAGATAACATGTACAAGGACTGTA
EX755066       --> GAAGCAATCAATTGCTTTGTCGAAGAAAGATAACATGTACAAGGACTGTA
FD938340       --> GAAGCAATCAATTGCTTTGTCGAAGAAAGATAACATGTACAAGGACTGTA

               1251   -   1301
UN22669        --> TGGAAACTGCTTCACAATCCGGCGACCATGACCTTGCAGAACAGCTTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- TGGAAACTGCTTCACAATCCGGCGACCATGACCTTGCAGAACAGCTTCTG
EX759235       <-- ....................................CAGAACAGCTTCTG
FD934742       <-- ....................................CAGAACAGCTTCTG
FD975937       <-- ..................................................
FD575918       <-- ..................................................
FD537714       <-- ..................................................
FD968328       <-- ..................................................
FD567213       <-- ..................................................
EW718250       --> ..................................................
FD541430       --> ..................................................
FD572239       --> ..................................................
EX905599       --> TGGAAACTGCTTCACAATCCGGCGACCATGACCTTGCAGAACAGCTTCTG
EV548510       --> TGGAAACTGCTTCACAATCCGGCGACCATGACCTTGCAGAACAGCTTCTG
FD979971       --> TGGAAACTGCTTCACAATCCGGCGACCATGACCTTGCAGAACAGCTTCTG
FD972434       --> TGGAAACTGCTTCACGATCCGGCGACCATGACCTTGCAGAACAGCTTCTG
EX755066       --> TGGAAACTGCTTCACAATCCGGCGACCATGACCTTGCAGAACAGCTTCTG
FD938340       --> TGGAAACTGCTTCACAATCCGGCGACCATGACCTTGCAGAACAGCTTCTG

               1301   -   1351
UN22669        --> GTTTACTTCATTGAACAGGGGAAAAAGGAATGCTTTGCCACATGTCTATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- GTTTACTTCATTGAACAGGGGAAAAAGGAATGCCTTGCCACATGTCTATT
EX759235       <-- GTTTACTTCAT-GAACAGGGGAAAAAGGAATGCTTTGCCACATGTCTATT
FD934742       <-- GTTTACTTCATTGAACAGGGGAAAAAGGAATGCTTTGCCACATGTCTATT
FD975937       <-- ..TTACTTCATTGAACAGGGGAAAAAGGAATGCTTTGCCACATGTCTATT
FD575918       <-- ..................................................
FD537714       <-- ..................................................
FD968328       <-- ..................................................
FD567213       <-- ..................................................
EW718250       --> ..................................................
FD541430       --> ..................................................
FD572239       --> ..................................................
EX905599       --> GTTTACTTCATTGA....................................
EV548510       --> GTTTACTTCATTGAACAGGGGAAAAAGGAATGCTTTGCCACATGTCTATT
FD979971       --> GTTTACTTCATTGAACAGGGGAAAAAGGAATGCTTTGCCACATGTCTATT
FD972434       --> GTTTACTTCATTGAACAGGGGAAAAAGGAATGCTTTGCCACATGTCTATT
EX755066       --> GTTTACTTCATTGAACAGGGGAAAAAGGAATGCTTTGCCACATGTCTATT
FD938340       --> GTTTACTTCATTGAACAGGGGAAAAAGGAATGCTTTGCCACATGTCTATT

               1351   -   1401
UN22669        --> TGTGTGTTATGACTTAATCCGACCAGATGTTGCTCTAGAACTTGCTTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- TGTGTGTTATGACTTAATCCGACCAGATGCTGCTCTAGAACTTGCTTGGA
EX759235       <-- TGTGTGTTATGACTTAATCCGACCAGATGTTGCTCTAGAACTTGCTTGGA
FD934742       <-- TGTGTGTTATGACTTAATCCGACCAGATGTTGCTCTAGAACTTGCTTGGA
FD975937       <-- TGTGTGTTATGACTTAATCCGACCAGATGTTGCTCTAGAACTTGCTTGGA
FD575918       <-- ...................CGACCAGATGTTGCTCTAGAACTTGCTTGGA
FD537714       <-- ......................CCAGATGTTGCTCTAGAACTTGCTTGGA
FD968328       <-- .......................................ACTTGCTTGGA
FD567213       <-- ..................................................
EW718250       --> ..................................................
FD541430       --> ..................................................
FD572239       --> ..................................................
EX905599       --> ..................................................
EV548510       --> TGTGTGTTATGACTTAATCCGACCAGATGTTGCTCTAGAACTTGCTTGGA
FD979971       --> TGTGTGTTATGACTTAATCCGACCAGATGTTGCTCTAGAACTTGCTTGGA
FD972434       --> TGTGTGTTATGACTTAATCCGACCAGATGTTGCTCTAGAACTTGCTTGGA
EX755066       --> TGTGTGTTATGACTTAATCCGACCAGATGTTGCTCTAGAACTTGCTTGGA
FD938340       --> TGTGTGTTATGACTTAATCCGACCAGATGTTGCTCTAGAACTTGCTTGGA

               1401   -   1451
UN22669        --> TCAACAACATGATTGACTTCGCCTTCCCGTATCTCCTCCAGTTTATCCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- TCAATAACATGATTGACTTTGCCTTCCCGTATCTCCTCCAGTTTATCCGA  Raphanus sativus var. oleiformis
EX759235       <-- TCAACAACATGATTGACTTCGCCTTCCCGTATCTCCTCCAGTTTATCCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD934742       <-- TCAATAACATGATTGACTTTGCCTTCCCGTATCTCCTCCAGTTTATCCGA  Raphanus sativus var. oleiformis
FD975937       <-- TCAACAACATGATTGACTTCGCCTTCCCGTATCTCCTCCAGTTTATCCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD575918       <-- TCAATAACATGATTGACTTTGCCTTCCCGTATCTCCTCCAGTTTATCCGA  Raphanus sativus cv Early Scarlet Globe
FD537714       <-- TCAACAACATGATTGACTTCGCCTTCCCGTATCTCCTCCAGTTTATCCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968328       <-- TCAACAACATGATTGACTTCGCCTTCCCGTATCTCCTCCAGTTTATCCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD567213       <-- ..................................................  Raphanus sativus var. oleiformis
EW718250       --> ..................................................  Raphanus sativus var. oleiformis
FD541430       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD572239       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX905599       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV548510       --> TCAACAACATGATTGACT................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979971       --> TCAACAACATGATTGACTTCGCCTTCCCGTATCTCCTCCAGTTTATCCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD972434       --> TCAACAACATGATTGACTTCGCCTTCCCGTATCTCCTCCAGTTTATCCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755066       --> TCAACAACATGATTGACTTCGCCTTCCCGTATCTCCTCCAGTTTATCCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD938340       --> TCAATAACATGATTGACTTTGCCTTCCCGTATCTCCTCCAGTTTATCCGA  Raphanus sativus var. oleiformis

               1451   -   1501
UN22669        --> GAATACTCTGGCAAAGTGGATGAACTGATCAAGGATAAGATAGAGGCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- GAATATTCTGGCAAAGTGGATGAACTGATCAAGGACAAGATAGAGGCACA  Raphanus sativus var. oleiformis
EX759235       <-- GAATATTCTGGCAAAGTGGATGAACTGATCAAGGATAAGATAGAGGCACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD934742       <-- GAATACTCTGGCAAAGTGGATGAACTGATCAAGGACAAGATAGAGGCACA  Raphanus sativus var. oleiformis
FD975937       <-- GAATACTCTGGCAAAGTGGATGAACTGATCAAGGATAAGATAGAGGCACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD575918       <-- GAATACTCTGGCAAAGTGGATGAACTGATCAAGGACAAGATAGAGGCACA  Raphanus sativus cv Early Scarlet Globe
FD537714       <-- GAATACTCTGGCAAAGTGGATGAACTGATCAAGGATAAGATAGAGGCACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968328       <-- GAATACTCTGGCAAAGTGGATGAACTGATCAAGGATAGGATAGAGGCACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD567213       <-- ......................AACTGATCAAGGACAAGATAGAGGCACA  Raphanus sativus var. oleiformis
EW718250       --> ..................................................  Raphanus sativus var. oleiformis
FD541430       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD572239       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX905599       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV548510       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979971       --> GAATACTCTGGCAAAGTGGATGAACTGATCAAGGATAAGATAGAGGCACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD972434       --> GAATACTCTGGCAAAGTGGATGAACTGATCAAGGATAGGATAGAGGCACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755066       --> GAATACTCTGGCAAAGTGGATGAACTGATCAAGGATAAGATAGAGGCACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD938340       --> GAATACTCTGGCAAAGTGGATGAACTGATCAAGGACAAGATAGAGGCACA  Raphanus sativus var. oleiformis

               1501   -   1551
UN22669        --> GAAAGAAGTGAAGGCCAAAGAGCAGGAAGAGAAGGATGTCATGTCCCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- GAAAGAAGTGAAGGCCAAAGAGCAGGAAGAGAAGGATGTCATGTCCCAAC
EX759235       <-- GAAAGAAGTGAAGGCCAAAGAGCAGGAAGAGAAGGATGTCATGTCCCAAC
FD934742       <-- GAAAGAAGTGAAGGCCAAAGAGCAGGAAGAGAAGGATGTCATGTCCCAAC
FD975937       <-- GAAAGAAGTGAAGGCCAAAGAGCAGGAAGAGAAGGATGTCATGTCCCAAC
FD575918       <-- GAAAGAAGTGAAGGCCAAAGAGCAGGAAGAGAAGGATGTCATGTCCCAAC
FD537714       <-- GAAAGAAGTGAAGGCCAAAGAGCAGGAAGAGAAGGATGTCATGTCCCAAC
FD968328       <-- GAAAGAAGTGAAGGCCAAAGAGCAGGAAGAGAAGGATGTCATGTCCCAAC
FD567213       <-- GAAAGAAGTGAAGGCCAAAGAGCAGGAAGAGAAGGATGTCATGTCCCAAC
EW718250       --> ..................................................
FD541430       --> ..................................................
FD572239       --> ..................................................
EX905599       --> ..................................................
EV548510       --> ..................................................
FD979971       --> GAAAGAAGTGAAG-CCAAAGAGCAGa........................
FD972434       --> GAAAGAAGTGAAGGCCAAAGAGCAG-AAGAGAAAGATGTCATGTCCCAAC
EX755066       --> GAAAGAAGTGAAGGCCAAAGAGCAGGAAGAGAAGGATGTCATGTCCCAAC
FD938340       --> GAAAGAAGTGAAGGCCAAAGAGCAGGAAGAGAAGGATGTCATGTCCCAAC

               1551   -   1601
UN22669        --> AGAACATGTACGCACAATTATTGCCACTGGCTCTACCTGCACCACCGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- AGAACATGTACGCACAATTATTGCCACTGGCTCTACCTGCACCACCGGTG  Raphanus sativus var. oleiformis
EX759235       <-- AGAACATGTACGCACAACTATTGCCACTGGCTCTACCTGCACCACCGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD934742       <-- AGAACATGTACGCACAATTATTGCCACTGGCTCTACCTGCACCACCGATG  Raphanus sativus var. oleiformis
FD975937       <-- AGAACATGTACGCACAATTATTGCCACTGGCTCTACCTGCACCACCGATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD575918       <-- AGAACATGTACGCACAATTATTGCCACTGGCTCTACCTGCACCACCGATG  Raphanus sativus cv Early Scarlet Globe
FD537714       <-- AGAACATGTACGCACAACTATTGCCACTGGCTCTACCTGCACCACCGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968328       <-- AGAACATGTACGCACAACTATTGCCACTGGCTCTACCTGCACCACCGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD567213       <-- AGAACATGTACACACAATTATTGCCACTGGCTCTACCTGCACCACCGATG  Raphanus sativus var. oleiformis
EW718250       --> ..................................................  Raphanus sativus var. oleiformis
FD541430       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD572239       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX905599       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV548510       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979971       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD972434       --> AGAACATGTACGCACAACTATTGCCACTGGCTCTACCTGCACCACCGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755066       --> AGAACATGTACGCACAACTATTGCCACTGGCTCTACCTGCACacgatg..  Raphanus raphanistrum subsp. raphanistrum (MS)
FD938340       --> AGAACATGTACGCACAATTATTGCCACTGGCTCTACCTGCACCACCGATG  Raphanus sativus var. oleiformis

               1601   -   1651
UN22669        --> CCAGGAATGGGAGGAGGTCCAGGTATGGGAGGCGGTTATGGTCCGCCACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- CCAGGAATGGGAGGAGGTCCAGGTATGGGAGGCGGTTATGGTCCGCCACC
EX759235       <-- CCAGGAATGGGAGGAGGTCCAGGTATGGGAGGCGGTTATGGTCCGCCACC
FD934742       <-- CCAGGAATGGGAGGAGGTCCAGGTATGGGAGGCGGTTATGGTCCGCCACC
FD975937       <-- CCAGGAATGGGAGGAGGTCCAGGTATGGGAGGCGGTTATGGTCCGCCACC
FD575918       <-- CCAGGAATGGGAGGAGGTCCAGGTATGGGAGGCGGTTATGGTCCGCCACC
FD537714       <-- CCAGGAATGGGAGGAGGTCCAGGTATGGGAGGCGGTTATGGTCCGCCACC
FD968328       <-- CCAGGAATGGGAGGAGGTCCAGGTATGGGAGGCGGTTATGGTCCGCCACC
FD567213       <-- CCAGGAATGGGAGGAGGTCCAGGTATGGGAGGCGGTTATGGTCCGCCACC
EW718250       --> ..................................................
FD541430       --> ..................................................
FD572239       --> ..................................................
EX905599       --> ..................................................
EV548510       --> ..................................................
FD979971       --> ..................................................
FD972434       --> CCAGGAATGGGAG-AG-TC-AGGTATGGGAGGCGGTTATGGTCCGCC...
EX755066       --> ..................................................
FD938340       --> CCAGGAATGGGAGGAGGTCCAGGTATGGGAGGCGGTTATGGTCCGCCACC

               1651   -   1701
UN22669        --> ACCGATGGGTGGAATGCCAGGAATGCCTCCGATGCCACCATATGGAATGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- ACCGATGGGTGGAATGCCAGGAATGCCTCCGATGCCACCATATGGAATGC  Raphanus sativus var. oleiformis
EX759235       <-- ACCAATGGGAGGAATGCCGGGAATGCCTCCGACGCCACCATATGGAATGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD934742       <-- ACCGATGGGTGGAATGCCAGGAATGCCTCCGATGCCACCATATGGAATGC  Raphanus sativus var. oleiformis
FD975937       <-- ACCAATGGGAGGAATGCCGGGAATGCCTCCGATGCCACCATATGGAATGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD575918       <-- ACCGATGGGTGGAATGCCAGGAATGCCTCCGATGCCACCATATGGAATGC  Raphanus sativus cv Early Scarlet Globe
FD537714       <-- ACCAATGGGAGGAATGCCGGGAATGCCTCCGATGCCACCATATGGAATGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968328       <-- ACCAATGGGAGGAATGCCGGGAATGCCTCCGATGCCACCATATGGAATGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD567213       <-- ACCGATGGGTGGAATGCCAGGAATGCCTCCGATGCCACCATATGGAATGC  Raphanus sativus var. oleiformis
EW718250       --> ..................................................  Raphanus sativus var. oleiformis
FD541430       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD572239       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX905599       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV548510       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979971       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD972434       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755066       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD938340       --> ACCGATGGGTGGAATGCCAGGAATGCCTCCGATGCCACCATATGGAATGC  Raphanus sativus var. oleiformis

               1701   -   1751
UN22669        --> CACCGATGGGCGGCTACTAAGACTATCAGAAACAAAAGCTATCCGTTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- CACCGATGGGCGGCTACTAAGACTATCAGAAACAAAAGCTATCCGTTCAA  Raphanus sativus var. oleiformis
EX759235       <-- CACCGATGGGCGGCTACTAAGACTATCAGAAACAAAAGCTATCCGTCCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD934742       <-- CACCGATGGGCGGCTACTAAGACTATCAGAAACAAAAGCTATCCGTTCAA  Raphanus sativus var. oleiformis
FD975937       <-- CACCGATGGGCGGCTACTAAGACTATCAGAAACAAAAGCTATCCGTCCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD575918       <-- CACCGATGGGCGGCTACTAAGACTATCAGAAACAAAAGCTATCCGTTCAA  Raphanus sativus cv Early Scarlet Globe
FD537714       <-- CACCGATGGGCGGCTACTAAGACTATCAGAAACAAAAGCTATCCGTCCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968328       <-- CACCGATGGGCGGCTACTAAGACTATCAGAAACAAAAGCTATCCGTCCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD567213       <-- CACCGATGGGCGGCTACTAAGACTATCAGAAACAAAAGCTATCCGTTCAA  Raphanus sativus var. oleiformis
EW718250       --> ..................................................  Raphanus sativus var. oleiformis
FD541430       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD572239       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX905599       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV548510       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979971       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD972434       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755066       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD938340       --> CACCGATGGGCGGCTACTAAGACTATCAGAAACAAAAGCTATCCGTTCAA  Raphanus sativus var. oleiformis

               1751   -   1801
UN22669        --> GTAATCAGTTGAGCAATCTCTACCACGGTGGTATTCGTCGGAATGTTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- GTAATCAGTTGAGCAATCTCTACCACGGTGGTATTCGTCGGAATGTTTTT  Raphanus sativus var. oleiformis
EX759235       <-- GTAAGCAGTTGCGCAATCTCTACCACGGTGGTATTCGTCGGAATGTTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD934742       <-- GTAATCAGTTGAGCAATCTCTACCACGGTGGTATTCGTCGGAATGTTTTT  Raphanus sativus var. oleiformis
FD975937       <-- GTAAACAGTTGCGCAATCTCTACCACGGTGGTATTCGTCGGAATGTTTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD575918       <-- GTAATCAGTTGAGCAATCTCTACCACGGTGGTATTCGTCGGAATGTTTTT  Raphanus sativus cv Early Scarlet Globe
FD537714       <-- GTAAGCAGTTGCGCAATCTCTACCACGGTGGTATTCGTCGGAATGTTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968328       <-- GTAAGCAGTTGCGCAATCTCTACCACGGTGGTATTCGTCGGAATGTTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD567213       <-- GTAATCAGTTGAGCAATCTCTACCACGGTGGTATTCGTCGGAATGTTTTT  Raphanus sativus var. oleiformis
EW718250       --> ..................................................  Raphanus sativus var. oleiformis
FD541430       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD572239       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX905599       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV548510       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979971       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD972434       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755066       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD938340       --> GTAATCAGTTGAGCA-TCTCTACCACGGTGGTATTCGTCGGA-TGTTTTT  Raphanus sativus var. oleiformis

               1801   -   1851
UN22669        --> TTCGTTGTTTGATTTTATAGGTATGTGTGGATAATAATCTCTCGTACTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- TTCGTTGTTTGATTTTATAGGTATGTGTGGATAATAATCTCTCGTACTTT
EX759235       <-- TTCGTTGTTTGATTTTATAGGTATGTGTGGATAATAATCTCTCGTACTTT
FD934742       <-- TTCGTTGTTTGATTTTATAGGTATGTGTGGATAATAATCTCTCGTACTTT
FD975937       <-- TTCGTTGTTTGATTTTATAGGTATGTGTGGATAATAATCTCTCGTACTTT
FD575918       <-- TTCGTTGTTTGATTTTATAGGTATGTGTGGATAATAATCTCTCGTACTTT
FD537714       <-- TTCGTTGTTTGATTTTATAGGTATGTGTGGATAATAATCTCTCGTACTTT
FD968328       <-- TTCGTTGTTTGATTTTATAGGTATGTGTGGATAACAATCTCTCGTACTTT
FD567213       <-- TTCGTTGTTTGATTTTATAGGTATGTGTGGATAATAATCTCTCGTACTTT
EW718250       --> ..................................................
FD541430       --> ..................................................
FD572239       --> ..................................................
EX905599       --> ..................................................
EV548510       --> ..................................................
FD979971       --> ..................................................
FD972434       --> ..................................................
EX755066       --> ..................................................
FD938340       --> T-CGT-GTT-GATTTTATAG-TATGTGTGGATA-TA-TCTCTCGTACTTT

               1851   -   1901
UN22669        --> TGTTTGTAATATTCTTTGGGGGGTCTTTTAGGTGAGTCATTTTTGGTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- TGTTTGTAATATTCTTTGGGGGGTCTTTTAGGTGAGTCATTTTTGGTTTA
EX759235       <-- TGTTTGTAATATTCTTTGGGGGGTCTTTTAGGTGAGTCATTTTTGGTTTA
FD934742       <-- TGTTTGTAATATTCTTTGGGGGGTCTTTTAGGTGAGTCATTTTTGGTTTA
FD975937       <-- TGTTTGTAATATTCTTTGGGGGGTCTTTTAGGTGAGTCATTTTTGGTTTA
FD575918       <-- TGTTTGTAATATTCTTTGGGGGGTCTTTTAGGTGAGTCATTTTTGGTTTA
FD537714       <-- TGTTTGTAATATTCTTTGGGGGGTCTTTTAGGTGAGTCATTTTTGGTTTA
FD968328       <-- TGTTTGTAATATTCTTTGGGGGGTCTTTTAGGTGAGTCATTTTTGGTTTA
FD567213       <-- TGTTTGTAATATTCTTTGGGGGGTCTTTTAGGTGAGTCATTTTTGGTTTA
EW718250       --> ..................................................
FD541430       --> ..................................................
FD572239       --> ..................................................
EX905599       --> ..................................................
EV548510       --> ..................................................
FD979971       --> ..................................................
FD972434       --> ..................................................
EX755066       --> ..................................................
FD938340       --> -GTT-GTAATATTCTTTGGGGG-TCTTT-AG-TGAGTCATTTTggttaag

               1901   -   1951
UN22669        --> AGGACACATTTTATTACATTTCTTTGGAGCGGAGAGAGGTGACTCATTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- AGGACACATTTTATTACATTTCTTTGGAGCGGAGAGAGGTGACTCATTGA
EX759235       <-- AGGACACATTTTATTACATTTCTTCGGAGCGGAGAGAGGTGACTCATTGA
FD934742       <-- AGGACACATTTTATTACATTTCTTTGGAGCGGAGAGAGGTGACTCATTGA
FD975937       <-- AGGACACATTTTATTACATTTCTTTGGAGCGGAGAGAGGTGACTCATTGA
FD575918       <-- AGGACACATTTTATTACATTTCTTTGGAGCGGAGAGAGGTGACTCATTGA
FD537714       <-- AGGACACATTTTATTACATTTCTTTGGAGCGGAGAGAGGTGACTCATTGA
FD968328       <-- AGGACACATTTTATTACATTTCTTTGGAGCGGAGAGAGGTGACTCATTGA
FD567213       <-- AGGACACATTTTATTACATTTCTTTGGAGCGGAGAGAGGTGACTCATTGA
EW718250       --> ..................................................
FD541430       --> ..................................................
FD572239       --> ..................................................
EX905599       --> ..................................................
EV548510       --> ..................................................
FD979971       --> ..................................................
FD972434       --> ..................................................
EX755066       --> ..................................................
FD938340       --> ..................................................

               1951   -   2001
UN22669        --> TAGTCTTATCATTTACTTTGACCTTGTTTCATGTTGGTTCTTTATTTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- TAGTCTTATCATTTACTTTGACCTTGTTTCATGTTGGTTCTTTATTTGAG
EX759235       <-- TAGTCTTATCATTTACTTTGACCTTGTTTCATGTTGGTTCTTTCTTTGAG
FD934742       <-- TAGTCTTATCATTTACTTTGACCTTGTTTCATGTTGGTTCTTTATTTGAG
FD975937       <-- TAGTCTTATCATTTACTTTGACCTTGTTg.....................
FD575918       <-- TAGTCTTATCATTTACTTTGACCTTGTTTCATGTTGGTTCTTTATTTGAG
FD537714       <-- TAGTCTTATCATTTACTTTGACCTT.........................
FD968328       <-- TAGTCTTATCATTTACTTTGACCTTGTTTCATGTTGGTTCTTTCTTTGAG
FD567213       <-- TAGTCTTATCATTTACTTTGACCTTGTTTCATGTTGGTTCTTTATTTGAG
EW718250       --> ..................................................
FD541430       --> ..................................................
FD572239       --> ..................................................
EX905599       --> ..................................................
EV548510       --> ..................................................
FD979971       --> ..................................................
FD972434       --> ..................................................
EX755066       --> ..................................................
FD938340       --> ..................................................

               2001   -   2051
UN22669        --> CTTATTGTTTCACTTATAAATTTCCATCATTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721999       <-- CTTATTGTTTtcc....................
EX759235       <-- CTTATTGTTTCACTTATAAATTTCCATC.....
FD934742       <-- CTTATTGTTTttcact.................
FD975937       <-- .................................
FD575918       <-- CTTATTGTTTttcacc.................
FD537714       <-- .................................
FD968328       <-- CTTATTGTTTCACTTATAAATTTCCATCATTTT
FD567213       <-- CTTATTGTTTttcacc.................
EW718250       --> .................................
FD541430       --> .................................
FD572239       --> .................................
EX905599       --> .................................
EV548510       --> .................................
FD979971       --> .................................
FD972434       --> .................................
EX755066       --> .................................
FD938340       --> .................................