Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN22706

               1      -     51
UN22706        --> CTCTTTTCGTTCCTATTGATTTCTTTATTTATATGTATTCTAAAAAATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714735       <-- .......CGTTCCGATTGATTTCTTTATTTATATGTATTCTAAAAAATTT
EY915657       <-- .......CGTTCCTATTGATTTCTTTATTTATATGTATTCTAAAAAATTT
FY437381       <-- .......CGTTCCTATTGATTTCTTTATTTATATGTATTCTAAAAAATTT
EY898121       <-- ...........CCTATTGATTTCTTTATTTATATGTATTCTAAAAAATTT
EY930249       <-- ..................................................
FY428441       <-- ..................................................
EV536702       <-- ..................................................
EV526866       <-- ..................................................
FD961085       <-- ..................................................
EX889152       <-- ..................................................
EV526718       <-- ..................................................
FY436336       <-- ..................................................
EY924660       <-- ..................................................
EX894760       <-- ..................................................
EV539424       <-- ..................................................
FD579608       <-- ..................................................
EW735569       <-- ..................................................
FD964569       <-- ..................................................
EX909685       <-- ..................................................
EY948537       <-- ..................................................
EY900615       <-- ..................................................
EV541087       --> CTCTTTTCGTTCCTATTGATTTCTTTATTTATATGTATTCTAAAAAATTT
EW739645       --> CTCTTTTCGTTCCTATTGATTTCTTTATTTATATGTATTCTAAAAAATTT
EY911462       --> .......CGTTCCTATTGATTTCTTTATTTATATGTATTCTAAAAAATTT
EY926490       --> .......CGTTCCGATTGATTTCTTTATTTATATGTATTCTAAAAAATTT
EY894270       --> ...........CCTATTGATTTCTTTATTTATATGTATTCTAAAAAATTT
EW719535       --> ..................................................
EV531128       --> ..................................................
EV531241       --> ..................................................
EV543210       --> ..................................................
FD965306       --> ..................................................
EX892944       --> ..................................................
EX899032       --> ..................................................
EY920275       --> ..................................................
FD583560       --> ..................................................
FD960537       --> ..................................................
FD959403       --> ..................................................
EX906052       --> ..................................................

               51     -    101
UN22706        --> GTTTTTACGTTAGGCTAATTCTAATGATTCTAGTGTTTTTTTATTTATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714735       <-- GTTTTTACGTTAGGCTAATTCTAATGATTCTAGTGTTTTTTTATTTATTT
EY915657       <-- GTTTTTACGTTAGGCTAATTCTAATGATTCTAGTGTTTTTTTATTTATTT
FY437381       <-- GTTTTTACGTTAGGCTAATTCTAATGATTCTAGTGTTTTTTTATTTATTT
EY898121       <-- GTTTTTATGTTAGGCTAATTCTAATGATTCTAGTGTTTTTTTATTTATTT
EY930249       <-- ..................................................
FY428441       <-- ..................................................
EV536702       <-- ..................................................
EV526866       <-- ..................................................
FD961085       <-- ..................................................
EX889152       <-- ..................................................
EV526718       <-- ..................................................
FY436336       <-- ..................................................
EY924660       <-- ..................................................
EX894760       <-- ..................................................
EV539424       <-- ..................................................
FD579608       <-- ..................................................
EW735569       <-- ..................................................
FD964569       <-- ..................................................
EX909685       <-- ..................................................
EY948537       <-- ..................................................
EY900615       <-- ..................................................
EV541087       --> GTTTTTACGTTAGGCTAATTCTAATGATTCTAGTGTTTTTTTATTTATTT
EW739645       --> GTTTTTACGTTAGGCTAATTCTAATGATTCTAGTGTTTTTTTATTTATTT
EY911462       --> GTTTTTACGTTAGGCTAATTCTAATGATTCTAGGGTTTTTTTATTTATTT
EY926490       --> GTTTTTACGTTAGGCTAATTCTAATGATTCTAGTGTTTTTTTATTTATTT
EY894270       --> GTTTTTATGTTAGGCTAATTCTAATGATTCTAGTGTTTTTTTATTTATTT
EW719535       --> ..................................................
EV531128       --> ..................................................
EV531241       --> ..................................................
EV543210       --> ..................................................
FD965306       --> ..................................................
EX892944       --> ..................................................
EX899032       --> ..................................................
EY920275       --> ..................................................
FD583560       --> ..................................................
FD960537       --> ..................................................
FD959403       --> ..................................................
EX906052       --> ..................................................

               101    -    151
UN22706        --> TGTTGTACAAAAAAACTTTTTGAATTACCTGTTGAAAGCGATTTCCCTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714735       <-- TGTTGTACAAAAAAACTTTTTGAATTACCTGTTGAAAGCGATTTCCCTAA
EY915657       <-- TGTTGTACAAAAAAACTTTTTGAATTACCTGTTGAAAGCGATTTCCCTAA
FY437381       <-- TGTTGTACAAAAAAACTTTTTGAATTACCTGTTGAAAGCGATTTCCCTAA
EY898121       <-- TGTTGTACAAAAAAACTTTTTGAATTACCTGTTGAAAGCGATTTCCCTAA
EY930249       <-- ..............................gtgGAAAGCGATTTCCTTAA
FY428441       <-- ..................................................
EV536702       <-- ..................................................
EV526866       <-- ..................................................
FD961085       <-- ..................................................
EX889152       <-- ..................................................
EV526718       <-- ..................................................
FY436336       <-- ..................................................
EY924660       <-- ..................................................
EX894760       <-- ..................................................
EV539424       <-- ..................................................
FD579608       <-- ..................................................
EW735569       <-- ..................................................
FD964569       <-- ..................................................
EX909685       <-- ..................................................
EY948537       <-- ..................................................
EY900615       <-- ..................................................
EV541087       --> TGTTGTACAAAAAAACTTTTTGAATTACCTGTTGAAAGCGATTTCCCTAA
EW739645       --> TGTTGTACAAAAAAACTTTTTGAATTACCTGTTGAAAGCGATTTCCCTAA
EY911462       --> TGTTGTACAAAAAAACTTTTTGAATTACCTGTTGAAAGCGATTTCCCTAA
EY926490       --> TGTTGTACAAAAAAACTTTTTGAATTACCTGTTGAAAGCGATTTCCCTAA
EY894270       --> TGTTGTACAAAAAAACTTTTTGAATTACCTGTTGAAAGCGATTTCCCTAA
EW719535       --> ..................................................
EV531128       --> ..................................................
EV531241       --> ..................................................
EV543210       --> ..................................................
FD965306       --> ..................................................
EX892944       --> ..................................................
EX899032       --> ..................................................
EY920275       --> ..................................................
FD583560       --> ..................................................
FD960537       --> ..................................................
FD959403       --> ..................................................
EX906052       --> ..................................................

               151    -    201
UN22706        --> AGAAATCGCTTTCAACGATGTCCAATATCCCTTCCTTTTCCAAATTTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714735       <-- AGAAATCGCTTTCAACGAT-TCCAATATCCCTTCCTTTTCCAAATTTTTT
EY915657       <-- AGAAATCGCTTTCAACGATGTCCTATATCCCTTCCTTTTCCAAATTTTTT
FY437381       <-- AGAAATCGCTTTCAACGATGTCCAATATCCCTTCCTTTTCCAAATTTTTT
EY898121       <-- AGAAATCGCTTTCAACGATGTCCAATATCCCTTCCTTTTCCAAATTTTTT
EY930249       <-- AGAAATCGCTTTCAACGATGTCCAATATCCCTTCCTTTTCCAAATTTTTT
FY428441       <-- .........................................AAATTTTTT
EV536702       <-- ..................................................
EV526866       <-- ..................................................
FD961085       <-- ..................................................
EX889152       <-- ..................................................
EV526718       <-- ..................................................
FY436336       <-- ..................................................
EY924660       <-- ..................................................
EX894760       <-- ..................................................
EV539424       <-- ..................................................
FD579608       <-- ..................................................
EW735569       <-- ..................................................
FD964569       <-- ..................................................
EX909685       <-- ..................................................
EY948537       <-- ..................................................
EY900615       <-- ..................................................
EV541087       --> AGAAATCGCTTTCAACGATGTCCAATATCCCTTCCTTTTCCAAATTTTTT
EW739645       --> AGAAATCGCTTTCAACGATGTCCAATATCCCTTCCTTTTCCAAATTTTTT
EY911462       --> AGAAATCGCTTTCAACGATGTCCTATATCCCTTCCTTTTCCAAATTTTTT
EY926490       --> AGAAATCGCTTTCAACGATGTCCAATATCCCTTCCTTTTCCAAATTTTTT
EY894270       --> AGAAATCGCTTTCAACGATGTCCAATATCCCTTCCTTTTCCAAATTTTTT
EW719535       --> .....TCGCTTTCAACGATGTCCAATATCCCTTCCTTTTCCAAATTTTTT
EV531128       --> ..................................................
EV531241       --> ..................................................
EV543210       --> ..................................................
FD965306       --> ..................................................
EX892944       --> ..................................................
EX899032       --> ..................................................
EY920275       --> ..................................................
FD583560       --> ..................................................
FD960537       --> ..................................................
FD959403       --> ..................................................
EX906052       --> ..................................................

               201    -    251
UN22706        --> T-ACGAATACGCTTTTTCGAGATAGAAGTACGTTTTTTTGGAACTGCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714735       <-- T-ACGAATACGCTTTTTCGAGATAGAAGTACGTTTTTTTGGAACTGCCAT
EY915657       <-- T-ACGAATACGCTTTTTCGAGATAGAAGTACGTTTTTTTGGAACTGCCAT
FY437381       <-- T-ACGAATACGCTTTTTCGAGATAGAAGTACGTTTTTTTGGAACTGCCAT
EY898121       <-- TTACGAATACGCTTTTTCGAGATAGAAGTACGTTTTTTTGGAACTGCCAT
EY930249       <-- T-ACGAATACGCTTTTTCGAGATAGAAGTACGTTTTTTTGGAACTGCCAT
FY428441       <-- T-ACGAATACGCTTTTTCGAGATAGAAGTACGTTTTTTTGGAACTGCCAT
EV536702       <-- ..ACGAATACGCTTTTTCGAGATAGAAGTACGTTTTTTTGGAACTGCCAT
EV526866       <-- ..................................................
FD961085       <-- ..................................................
EX889152       <-- ..................................................
EV526718       <-- ..................................................
FY436336       <-- ..................................................
EY924660       <-- ..................................................
EX894760       <-- ..................................................
EV539424       <-- ..................................................
FD579608       <-- ..................................................
EW735569       <-- ..................................................
FD964569       <-- ..................................................
EX909685       <-- ..................................................
EY948537       <-- ..................................................
EY900615       <-- ..................................................
EV541087       --> T-ACGAATACGCTTTTTCGAGATAGAAGTACGTTTTTTTGGAACTGCCAT
EW739645       --> --ACGAATACGCTTTTTCGAGATAGAAGTACGTTTTTTTGGAACTGCCAT
EY911462       --> T-ACGAATACGCTTTTTCGAGATAGAAGTACGTTTTTTTGGAACTGCCAT
EY926490       --> T-ACGAATACGCTTTTTCGAGATAGAAGTACGTTTTTTTGGAACTGCCAT
EY894270       --> TTACGAATACGCTTTTTCGAGATAGAAGTACGTTTTTTTGGAACTGCCAT
EW719535       --> T-ACGAATACGCTTTTTCGAGATAGAAGTACGTTTTTTTGGAACTGCCAT
EV531128       --> .................CGAGATAGAAGTACGTTTTTTTGGAACTGCCAT
EV531241       --> .................CGAGATAGAAGTACGTTTTTTTGGAACTGCCAT
EV543210       --> .......................................GGAACTGCCAT
FD965306       --> ..................................................
EX892944       --> ..................................................
EX899032       --> ..................................................
EY920275       --> ..................................................
FD583560       --> ..................................................
FD960537       --> ..................................................
FD959403       --> ..................................................
EX906052       --> ..................................................

               251    -    301
UN22706        --> TCAAAAATGAAAAAAGTTTTTCAGTGGTATAATTGTATGTCAAAGACATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714735       <-- TCAAAAATGAAAAAAGTTTTTCAGTGGTGTAATTGTATGTCAAAGACATT
EY915657       <-- TCAAAAA...........................................
FY437381       <-- TCAAAAATGAAAAAAGTTTT-CAGTGGTATA...................
EY898121       <-- TCAAAAATGAAAAAAGTTTTTCAGTGGTATAATTGTATGTCAAAGACATT
EY930249       <-- TCAAAAATGAAAAAAGTTTTTCAGTGGTATAGTTGTATGTCAAAGACATT
FY428441       <-- TCAAAAATGAAAAAAGTTTTTCAGTGGTATAATTGTATGTCAAAGACATT
EV536702       <-- TCAAAAATGAAAAAAGTTTTTCAGTGGTATAATTGTATGTCAAAGACATT
EV526866       <-- .......................ttcagtgtatatgtaGTCAAAGACATT
FD961085       <-- .....................................gGTCAAAGACATT
EX889152       <-- ..................................................
EV526718       <-- ..................................................
FY436336       <-- ..................................................
EY924660       <-- ..................................................
EX894760       <-- ..................................................
EV539424       <-- ..................................................
FD579608       <-- ..................................................
EW735569       <-- ..................................................
FD964569       <-- ..................................................
EX909685       <-- ..................................................
EY948537       <-- ..................................................
EY900615       <-- ..................................................
EV541087       --> TCAAAAATGAAAAAAGTTTTTCAGTGGTATAATTGTATGTCAAAGACATT
EW739645       --> TCAAAA-TGAAAAAAGTTTTTCAGTGGTATAATTGTATGTCAAAGACATT
EY911462       --> TCAAAAA...........................................
EY926490       --> TCAAAAATGAAAAAAGTTTTTCAGTGGTATAGTTGTATGTCAAAGACATT
EY894270       --> TCAAAAATGAAAAAAGTTTTTCAGTGGTATAATTGTATGTCAAAGACATT
EW719535       --> TCAAAAATGAAAAAAGTTTTTCAGTGGTGTAATTGTATGTCAAAGACATT
EV531128       --> TCAAAAATGAAAAAAGTTTTTCAGTGGTATAATTGTATGTCAAAGACATT
EV531241       --> TCAAAAATGAAAAAAGTTTTTCAGTGGTATAATTGTATGTCAAAGACATT
EV543210       --> TCAAAAATGAAAAAAGTTTTTCAGTGGTATAATTGTATGTCAAAGACATT
FD965306       --> .....................................gGTCAAAGACATT
EX892944       --> ..................................................
EX899032       --> ..................................................
EY920275       --> ..................................................
FD583560       --> ..................................................
FD960537       --> ..................................................
FD959403       --> ..................................................
EX906052       --> ..................................................

               301    -    351
UN22706        --> TATTATTCTATTCTTTCGTACTCCATATCGAGTAATTTTTTTCTTTCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714735       <-- TATTATTCTATTCTTTCGTACTCCATATCGAGTAATTTTTTTCTTTCc..
EY915657       <-- ..................................................
FY437381       <-- ..................................................
EY898121       <-- TATTATTCTATTCTTTCGTACTCCATATCGAGTAATTTTTTTtttcc...
EY930249       <-- TATTATTCTATTCTTTCGTACTCCATATCGAGTAATTTTTTTCTTTCc..
FY428441       <-- TATTATTCTATTCTTTCGTACTCCATATCGAGTAATTTTTTTCTTTCAAA
EV536702       <-- TATTATTCTATTCTTTCGTACTCCATATCGAGTAATTTTTTTCTTTCAAA
EV526866       <-- TAT-ATTCTAT-C-TTCGTACTCCATATCGAGTAATTTTTT-CTTTCAAA
FD961085       <-- TATTATTCTATTCTTTCGTACTCCATATCGAGTAATTTTTTTCTTTCAAA
EX889152       <-- ..............................................CAAA
EV526718       <-- ..................................................
FY436336       <-- ..................................................
EY924660       <-- ..................................................
EX894760       <-- ..................................................
EV539424       <-- ..................................................
FD579608       <-- ..................................................
EW735569       <-- ..................................................
FD964569       <-- ..................................................
EX909685       <-- ..................................................
EY948537       <-- ..................................................
EY900615       <-- ..................................................
EV541087       --> TATTATTCTATTCTTTCGTACTCCATATCGAGTAATTTTTTTCTTTCAAA
EW739645       --> TATTATTCTATTCTTTCGTACTCCATATCGAGTAATTTTTT-CTTTCAAA
EY911462       --> ..................................................
EY926490       --> TATTATTCTATTCTTTCGTACTCCATATCGAGTAATTTTTTTCTTTCc..
EY894270       --> TATTATTCTATTCTTTCGTACTCCATATCGAGTAATTTTTTTtttcc...
EW719535       --> TATTATTCTATTCTTTCGTACTCCATATCGAGTAATTTTTTTCTTTCc..
EV531128       --> TATTATTCTATTCTTTCGTACTCCATATCGAGTAATTTTTTTCTTTCAAA
EV531241       --> TATTATTCTATTCTTTCGTACTCCATATCGAGTAATTTTTTTCTTTCAAA
EV543210       --> TATTATTCTATTCTTTCGTACTCCATATCGAGTAATTTTTTTCTTTCAAA
FD965306       --> TATTATTCTATTCTTTCGTACTCCATATCGAGTAATTTTTTTCTTTCAAA
EX892944       --> ..............................................CAAA
EX899032       --> ..................................................
EY920275       --> ..................................................
FD583560       --> ..................................................
FD960537       --> ..................................................
FD959403       --> ..................................................
EX906052       --> ..................................................

               351    -    401
UN22706        --> TTTTATTATATATTATTTTTCAAACAAAACAGACATTCAAAAATTTAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714735       <-- ..................................................
EY915657       <-- ..................................................
FY437381       <-- ..................................................
EY898121       <-- ..................................................
EY930249       <-- ..................................................
FY428441       <-- TTTTATTATATATTATTTTTCAAACAAAACAGACATTCAAAAATTTAAAA
EV536702       <-- TTTTATTATATATTATTTTTCAAACAAAACAGACATTCAAAAATTTAAAA
EV526866       <-- TTTTATTATATATTATTTTTCAAACAAAACAGACATTCAAAAATTTAAAA
FD961085       <-- TTTTATTATATATTATTTTTCAAACAAAACAGACATTCAAAAATTTAAAA
EX889152       <-- TTTTATTATATATTATTTTTCAAACAAAACAGACATTCAAAAATTTAAAA
EV526718       <-- .......................ACAAAACAGACATTCAAAAATTTAAAA
FY436336       <-- ..................................................
EY924660       <-- ..................................................
EX894760       <-- ..................................................
EV539424       <-- ..................................................
FD579608       <-- ..................................................
EW735569       <-- ..................................................
FD964569       <-- ..................................................
EX909685       <-- ..................................................
EY948537       <-- ..................................................
EY900615       <-- ..................................................
EV541087       --> TTTTATTATATATTATTTTTCAAACAAAACAGACATTCAAAAATTTAAAA
EW739645       --> TTTTATTATATATTATTTTTCAAACAAAACAGACATTCAAAAATTTAAAA
EY911462       --> ..................................................
EY926490       --> ..................................................
EY894270       --> ..................................................
EW719535       --> ..................................................
EV531128       --> TTTTATTATATATTATTTTTCAAACAAAACAGACATTCAAAAATTTAAAA
EV531241       --> TTTTATTATATATTATTTTTCAAACAAAACAGACATTCAAAAATTTAAAA
EV543210       --> TTTTATTATATATTATTTTTCAAACAAAACAGACATTCAAAAATTTAAAA
FD965306       --> TTTTATTATATATTATTTTTCAAACAAAACAGACATTCAAAAATTTAAAA
EX892944       --> TTTTATTATATATTATTTTTCAAACAAAACAGACATTCAAAAATTTAAAA
EX899032       --> ...............TTTTTCAAACAAAACAGACATTCGAAAATTTAAAA
EY920275       --> ....................CAAACAAAACAGACATTCAAAAATTTAAAA
FD583560       --> ..................................................
FD960537       --> ..................................................
FD959403       --> ..................................................
EX906052       --> ..................................................

               401    -    451
UN22706        --> CCCAACTATTTTTTACCTTTTTCTTGAAAAATTTTTTGTATTTAACGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714735       <-- ..................................................
EY915657       <-- ..................................................
FY437381       <-- ..................................................
EY898121       <-- ..................................................
EY930249       <-- ..................................................
FY428441       <-- CCCAACTATTTTTTACCTTTTTCTTGAAAAATTTTTTGTATTTAACGTTT
EV536702       <-- CCCAACTATTTTTTACCTTTTTCTTGAAAAATTTTTTGTATTTAACGTTT
EV526866       <-- CCCAACTATTTTTTACCTTTT-CTTGAAAAATTTTTTGTATTTAACGTTT
FD961085       <-- CCCAACTATTTTTTACCTTTTTCTTGAAAAATTTTTTGTATTTAACGTTT
EX889152       <-- CCCAACTATTTTTTACCTTTTTCTTGAAAAATTTTTTGTATTTAACGTTT
EV526718       <-- CCCAACTATTTTTTACCTTTTTCTTGAAAAATTTTTTGTATTTAACGTTT
FY436336       <-- ..................................................
EY924660       <-- ..................................................
EX894760       <-- ..................................................
EV539424       <-- ..................................................
FD579608       <-- ..................................................
EW735569       <-- ..................................................
FD964569       <-- ..................................................
EX909685       <-- ..................................................
EY948537       <-- ..................................................
EY900615       <-- ..................................................
EV541087       --> CCCAACTATTTTTTACCTTTTTCTTGAAAAATTTTTTGTATTTAACGTTT
EW739645       --> CCCAACTATTTTTTACCTTTTTCTTGAAAAATTTTTTGTATTTAACGTTT
EY911462       --> ..................................................
EY926490       --> ..................................................
EY894270       --> ..................................................
EW719535       --> ..................................................
EV531128       --> CCCAACTATTTTTTACCTTTTTCTTGAAAAATTTTTTGTATTTAACGTTT
EV531241       --> CCCAACTATTTTTTACCTTTTTCTTGAAAAATTTTTTGTATTTAACGTTT
EV543210       --> CCCAACTATTTTCTACCTTTTTCTTGAAAAATTTTTTGTATTTAATGTTT
FD965306       --> CCCAACTATTTTTTACCTTTTTCTTGAAAAATTTTTTGTATTTAACGTTT
EX892944       --> CCCAACTATTTTTTACCTTTTTCTTGAAAAATTTTTTGTATTTAACGTTT
EX899032       --> CCCAACTATTTTTTACCTTCTTCTTGAAAAATTTTTTGTATTTAACGTTT
EY920275       --> CCCAACTATTTTTTACCTTTTTCTTGAAAAATTTTTTGTATTTAACGTTT
FD583560       --> .........................GAAAAATTTTTTGTATTTAACGTTT
FD960537       --> ..................................................
FD959403       --> ..................................................
EX906052       --> ..................................................

               451    -    501
UN22706        --> TAAATCCGTATGAGAGTGCTCATTTAATTAATCTATACTGTATAGATTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714735       <-- ..................................................  Raphanus sativus var. oleiformis
EY915657       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY437381       <-- ..................................................  Raphanus sativus cv GSK3-1
EY898121       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY930249       <-- ..................................................  Raphanus sativus var. oleiformis
FY428441       <-- TAAATCCGTATGAGAGTGCTCATTTAATTAATCTATACTG-ATAGATTAT  Raphanus sativus cv GSK3-1
EV536702       <-- TAAATCCGTATGAGAGTGCTCATTTAATTAATCTATACTGTATAGATTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV526866       <-- TAAATCCGTATGAGAGTGCTCATTTAATTAATCTATACTGTATAGATTAT  Raphanus raphanistrum subsp. maritimus
FD961085       <-- TAAATCCGTATGAGAGTGCTCATTTAATTAATCTATACTGTATAGATTAT  Raphanus raphanistrum subsp. maritimus
EX889152       <-- TAAATCCGTATGAGAGTGCTCATTTAATTAATCTATACTG-ATAGATTAT  Raphanus sativus var. oleiformis
EV526718       <-- TAAATCCGTATGAGAGTGCTCATTTAATTAATCTATACTGTATAGATTAT  Raphanus raphanistrum subsp. maritimus
FY436336       <-- ....................CATTTAATTAATCTATACTG-ATAGATTAT  Raphanus sativus cv GSK3-1
EY924660       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX894760       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV539424       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD579608       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW735569       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD964569       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX909685       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY948537       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY900615       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV541087       --> TAAATCCGTATGAGAGTGCTCATTTAATTAATCTATACTGTATAGATTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW739645       --> TAAATCCGTATGAGAGTGCTCATTTAATTAATCTATACTGTATAGATTAT  Raphanus sativus cv Rat-Tail Radish #3870
EY911462       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY926490       --> ..................................................  Raphanus sativus var. oleiformis
EY894270       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW719535       --> ..................................................  Raphanus sativus var. oleiformis
EV531128       --> TAAATCCGTATGAGAGTGCTCATTTAATTAATCTATACTGTATAGATTAT  Raphanus raphanistrum subsp. maritimus
EV531241       --> TAAATCCGTATGAGAGTGCTCATTTAATTAATCTATACTGTATAGATTAT  Raphanus raphanistrum subsp. maritimus
EV543210       --> TAAATCCGTATGAGAGTGCTCATTTAATTAATCTATACTGTATAGATTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD965306       --> TAAATCCGTATGAGAGTGCTCATTTAATTAATCTATACTGTATAGATTAT  Raphanus raphanistrum subsp. maritimus
EX892944       --> TAAATCCGTATGAGAGTGCTCATTTAATTAATCTATACTG-ATAGATTAT  Raphanus sativus var. oleiformis
EX899032       --> TAAATCCGTATGAGAGTGCTCATTTAATTAATCTATACTG-ATAGATTAT  Raphanus sativus cv Early Scarlet Globe
EY920275       --> TAAATCCGTATGAGAGTGCTCATTTAATTAATCTATACTG-ATAGATTAT  Raphanus raphanistrum subsp. landra
FD583560       --> TAAATCCGTATGAGAGTGCTCATTTAATTAATCTATACTG-ATAGATTAT  Raphanus sativus cv Rat-Tail Radish #3870
FD960537       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD959403       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX906052       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               501    -    551
UN22706        --> ATTAGAAAAAATTTTATTAAATTTCTTCACTTCATATGTAAAAAAAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714735       <-- ..................................................
EY915657       <-- ..................................................
FY437381       <-- ..................................................
EY898121       <-- ..................................................
EY930249       <-- ..................................................
FY428441       <-- ATTAGAAAAAATTTTATTAAATTTCTTCACTTCATATGTAAAAAAAAAAA
EV536702       <-- ATTAGAAAAAATTTTATTAAATTTCTTCACTTCATATGTAAAAAAAAAAA
EV526866       <-- ATTAGAAAAAATTTTATTAAATTTCTTCACTTCATATGTAAAAAAAAAAA
FD961085       <-- ATTAGAAAAAATTTTATTAAATTTCTTCACTTCATATGTAAAAAAAAAAA
EX889152       <-- ATTAGAAAAAATTTTATTAAATTTCTTCACTTCATATGTAAAAAAAA--A
EV526718       <-- ATTAGAAAAAATTTTATTAAATTTCTTCACTTCATATGTAAAAAAAAAAA
FY436336       <-- ATTAGAAAAAATTTTATTAAATTTCTTCACTTCATATGTAAAAAAAAAAA
EY924660       <-- ............................................AAAAAA
EX894760       <-- .............................................AAAAA
EV539424       <-- .................................................A
FD579608       <-- ..................................................
EW735569       <-- ..................................................
FD964569       <-- ..................................................
EX909685       <-- ..................................................
EY948537       <-- ..................................................
EY900615       <-- ..................................................
EV541087       --> ATTAGAAAAAATTTTATTAAATTTCTTCACTTCATATGTAAAAAAAAAAA
EW739645       --> ATTAGAAAAAATTTTATTAAATTTCTTCACTTCATATGTAAAAAAAAAA-
EY911462       --> ..................................................
EY926490       --> ..................................................
EY894270       --> ..................................................
EW719535       --> ..................................................
EV531128       --> ATTAGAAAAAATTTTATTAAATTTCTTCACTTCATATGTAAAAAAAAAAA
EV531241       --> ATTAGAAAAAATTTTATTAAATTTCTTCACTTCATATGTAAAAAAAAAAA
EV543210       --> ATTAGAAAAAATTTTATTAAATTTCTTCACTTCATATGTAAAAAAAAAAA
FD965306       --> ATTAGAAAAAATTTTATTAAATTTCTTCACTTCATATGTAAAAAAAAAAA
EX892944       --> ATTAGAAAAAATTTTATTAAATTTCTTCACTTCATATGTAAAAAAAAA--
EX899032       --> ATTAGAAAAAATTTTATTAAATTTCTTCACTTCATATGTAAAAAAAAAAA
EY920275       --> ATTAGAAAAAATTTTATTAAATTTCTTCACTTCATATGTAAAAAAAAAA-
FD583560       --> ATTAGAAAAAATTTTATTAAATTTCTTCACTTCATATGTAAAAAAAAAA-
FD960537       --> ..................................................
FD959403       --> ..................................................
EX906052       --> ..................................................

               551    -    601
UN22706        --> TATCGATTATAATACTATTTCTTGAAAAAAAAA-GCTCATTTAGTGTACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714735       <-- ..................................................
EY915657       <-- ..................................................
FY437381       <-- ..................................................
EY898121       <-- ..................................................
EY930249       <-- ..................................................
FY428441       <-- TATCGATTATAATACTATTTCTTGAAAAAAAAA-GCTCATTTAGTGTACT
EV536702       <-- TATCGATTATAATACTATTTCTTGAAAAAAAAA-GCTCATTTAGTGTACT
EV526866       <-- TATCGATTATAATACTATTTCTTGAAAAAAAAA-GCTCATTTAGTGTACT
FD961085       <-- TATCGATTATAATACTATTTCTTGAAAAAAAAA-GCTCATTTAGTGTACT
EX889152       <-- TATCGATTATAATACTATTTCTTGAAAAAAAAA-GCTCATTTAGTGTACT
EV526718       <-- TATCGATTATAATACTATTTCTTGAAAAAAAAA-GCTCATTTAGTGTACT
FY436336       <-- TATCGATTATAATACTATTTCTTGAAAAAAAAA-GCTCATTTAGTGTACT
EY924660       <-- TATCGAT-ATAATACTATT-C-TGAAAAAAAA--GCTCATTTAGTGTACT
EX894760       <-- TATCGATTATAATACTATTTCTTGAAAAAAAA--GCTCATTTAGTGTACT
EV539424       <-- TATCGATTATAATACTATT-CTTGAAAAAAAAA-GCTCATTTAGTGTACT
FD579608       <-- ..................................................
EW735569       <-- ..................................................
FD964569       <-- ..................................................
EX909685       <-- ..................................................
EY948537       <-- ..................................................
EY900615       <-- ..................................................
EV541087       --> TATCGATTATAATACTATTTCTTGAAAAAAAAA-GCTCATTTAGTGTACT
EW739645       --> TATCGATTATAATACTATTTCTTGAAAAAAAAA-GCTCATTTAGTGTACT
EY911462       --> ..................................................
EY926490       --> ..................................................
EY894270       --> ..................................................
EW719535       --> ..................................................
EV531128       --> TATCGATTATAATACTATTTCTTGAAAAAAAAA-GCTCATTTAGTGTACT
EV531241       --> TATCGATTATAATACTATTTCTTGAAAAAAAAA-GCTCATTTAGTGTACT
EV543210       --> TATCGATTATAATACTATTTCTTGAAAAAAAAA-GCTCATTTAGTGTACT
FD965306       --> TATCGATTATAATACTATTTCTTGAAAAAAAAA-GCTCATTTAGTGTACT
EX892944       --> TATCGATTATAATACTATTTCTTGAAAAAAAAA-GCTCATTTAGTGTACT
EX899032       --> TATCGATTATAATACTATTTCTTGAAAAAAAAA-GCTCATTTAGTGTACT
EY920275       --> TATCGATTATAATACTATTTCTTGAAAAAAAAA-GCTCATTTAGTGTACT
FD583560       --> TATCGATTATAATACTATTTCTTGAAAAAAAAAAGCTCATTTAGTGTACT
FD960537       --> ..................................................
FD959403       --> ..................................................
EX906052       --> ..................................................

               601    -    651
UN22706        --> GGAAGACAATCACTAAATTCCATAATTCAATAATAATTCTAAATAATCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714735       <-- ..................................................
EY915657       <-- ..................................................
FY437381       <-- ..................................................
EY898121       <-- ..................................................
EY930249       <-- ..................................................
FY428441       <-- GGAAGACAATCACTAAATTCCATAATTCAATAATAATTCTAAATAATCAA
EV536702       <-- GGAAGACAATCACTAAATTCCATAATTCAATAATAATTCTAAATAATCAA
EV526866       <-- GGAAGACAATCACTAAATTCCATAATTCAATAATAATTCTAAATAATCAA
FD961085       <-- GGAAGACAATCACTAAATTCCATAATTCAATAATAATTCTAAATAATCAA
EX889152       <-- GGAAGACAATCACTAAATTCCATAATTCAATAATAATTCTAAATAATCAA
EV526718       <-- GGAAGACAATCACTAAATTCCATAATTCAATAATAATTCTAAATAATCAA
FY436336       <-- GGAAGACAATCACTAAATTCCATAATTCAATAATAATTCTAAATAATCAA
EY924660       <-- G-AAGACAATCACTAAATTCCATAATTCAATAATAATTCTAAATAATCAA
EX894760       <-- GGAAGACAATCACTAAATTCCATAATTCAATAATAATTCTAAATAATCAA
EV539424       <-- GGAAGACAATCACTAAATTCCATAATTCAATAATAATTCTAAATAATCAA
FD579608       <-- ..................................................
EW735569       <-- ..................................................
FD964569       <-- ..................................................
EX909685       <-- ..................................................
EY948537       <-- ..................................................
EY900615       <-- ..................................................
EV541087       --> GGAAGACAATCACTAAATTCCATAATTCAATAATAATTCTAAATAATCAA
EW739645       --> GGAAGACAATCACTAAATTCCATAATTCAATAATAATTCTAAATAATCAA
EY911462       --> ..................................................
EY926490       --> ..................................................
EY894270       --> ..................................................
EW719535       --> ..................................................
EV531128       --> GGAAGACAATCACTAAATTCCATAATTCAATAATAATTCTAAATAATCAA
EV531241       --> GGAAGACAATCACTAAATTCCATAATTCAATAATAATTCTAAATAATCAA
EV543210       --> GGAAGACAATCACTAAATTCCATAATTCAATAATAATTCTAAATAATCAA
FD965306       --> GGAAGACAATCACTAAATTCCATAATTCAATAATAATTCTAAATAATCAA
EX892944       --> GGAAGACAATCACTAAATTCCATAATTCAATAATAATTCTAAATAATCAA
EX899032       --> GGAAGACAATCACTAAATTCCATAATTCAATAATAATTCTAAATAATCAA
EY920275       --> GGAAGACAATCACTAAATTCCATAATTCAATAATAATTCTAAATAATCAA
FD583560       --> GGAAGACAATCACTAAATTCCATAATTCAATAATAATTCTAAATAATCAA
FD960537       --> ..................................................
FD959403       --> ..................................................
EX906052       --> ..................................................

               651    -    701
UN22706        --> ACCCAAATAACTTTTTTTT-ATAATTAATATTAAGTATTTTTTTGTCGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714735       <-- ..................................................
EY915657       <-- ..................................................
FY437381       <-- ..................................................
EY898121       <-- ..................................................
EY930249       <-- ..................................................
FY428441       <-- ACCCAAATAACTTTTTTTT-ATAATTAATATTAAGTATTTTTTTGTCGTG
EV536702       <-- ACCCAAATAACTTTTTTTT-ATAATTAATATTAAGTATTTTTTTGTCGTG
EV526866       <-- ACCCAAATAACTTTTTTTT-ATAATTAATATTAAGTATTTTTTTGTCGTG
FD961085       <-- ACCCAAATAACTTTTT--T-ATAATTAATATTAAGTATTTTTTTGTCGTG
EX889152       <-- ACCCAAATAACTTTTTTTT-ATAATTAATATTAAGTATTTTTTTGTCGTG
EV526718       <-- ACCCAAATAACTTTTTTTT-ATAATTAATATTAAGTATTTTTTTGTCGTG
FY436336       <-- ACCCAAATAACTTTTTTTT-ATAATTAATATTAAGTATTTTTTTGTCGTG
EY924660       <-- ACCCAAATAACTTTTTTT--ATAATTAATATTAAGTATTTTTT-GTCGTG
EX894760       <-- ACCCAAATAACTTTTTTT--ATAATTAATATTAAGTATTTTTT-GTCGTG
EV539424       <-- ACCCAAATAACTTTTTTTT-ATAATTAATATTAAGTATTTTTTTGTCGTG
FD579608       <-- .....................................TTTTTTTGTCGTG
EW735569       <-- ............................................GTCGTG
FD964569       <-- ............................................GTCGTG
EX909685       <-- ..................................................
EY948537       <-- ..................................................
EY900615       <-- ..................................................
EV541087       --> ACCCAAATAACTTTTTTTT-ATAATTAATATTAAGTATTTTTTTGTCGTG
EW739645       --> ACCCAAATAACTTTTTTTT-ATAATTAATATTAAGTATTTTTTTGTCGTG
EY911462       --> ..................................................
EY926490       --> ..................................................
EY894270       --> ..................................................
EW719535       --> ..................................................
EV531128       --> ACCCAAATAACTTTTTTTT-ATAATTAATATTAAGTATTTTTTTGTCGTG
EV531241       --> ACCCAAATAACTTTTTTTT-ATAATTAATATTAAGTATTTTTTTGTCGTG
EV543210       --> ACCCAAATAACTTTTTTTT-ATAATTAATATTAAGTATTTTTTTGTCGTG
FD965306       --> ACCCAAATAACTTTTTT---ATAATTAATATTAAGTATTTTTTTGTCGTG
EX892944       --> ACCCAAATAACTTTTTTTT-ATAATTAATATTAAGTATTTTTTTGTCGTG
EX899032       --> ACCCAAATAACTTTTTTTT-ATAATTAATATTAAGTATTTTTTTGTCGTG
EY920275       --> ACCCAAATAACTTTTTTTT-ATAATTAATATTAAGTATTTTTTTGTCGTG
FD583560       --> ACCCAAATAACTTTTTTTTTATAATTAATATTAAGTATTTTTTTGTCGTG
FD960537       --> ............................................GTCGTG
FD959403       --> ..............................................CGTG
EX906052       --> ..................................................

               701    -    751
UN22706        --> TAAATCTTTGTTCTATTCTTAATATATGTATATAAATTATTGTAATACGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714735       <-- ..................................................
EY915657       <-- ..................................................
FY437381       <-- ..................................................
EY898121       <-- ..................................................
EY930249       <-- ..................................................
FY428441       <-- TAAATCTTTGTTCTATTCTTAATATATGTATATAAATTATTGTAATACGG
EV536702       <-- TAAATCTTTGTTCTATTCTTAATAc.........................
EV526866       <-- TAAATCTTTGTTCTATTCTTAATATATGTATATAAATTATTGTAATACGG
FD961085       <-- TAAATCTTTGTTCTATTCTTAATATATGTATATAAATTATTGTAATACGG
EX889152       <-- TAAATCTTTGTTCTATTCTTAATTTATGTATATAAATTATTGTAATACGG
EV526718       <-- TAAATCTTTGTTCTATTCTTAATATATGTATATAAATTATTGTAATACGG
FY436336       <-- TAAATCTTTGTTCTATTCTTAATATATGTATATAAATTATTGTAATACGG
EY924660       <-- TAAATCTTTGTTCTATTCTTAATATATGTATATAAATTATTGTAATACGG
EX894760       <-- TAAATCTTTGTTCTATTCTTAATATATGTATATAAATTATTGTAATACGG
EV539424       <-- TAAATCTTTGTTCTATTCTTAATATATGTATATAAATTATTGTAATACGG
FD579608       <-- TAAATCCTTGTTCTATTCTTAATTTATGTATATAAATTATTGTAATACGG
EW735569       <-- TAAATCTTTGTTCTATTCTTAATATATGTATATAAATTATTGTAATACGG
FD964569       <-- TAAATCTTTGTTCTATTCTTAATATATGTATATAAATTATTGTAATACGG
EX909685       <-- ..................................................
EY948537       <-- ..................................................
EY900615       <-- ..................................................
EV541087       --> TAAATCTTTGTTCTATTCTTAATAc.........................
EW739645       --> TAAATCTTTGTTCTATTCTTAATATATGTATATAAATTATTGTAATACGG
EY911462       --> ..................................................
EY926490       --> ..................................................
EY894270       --> ..................................................
EW719535       --> ..................................................
EV531128       --> TAAATCTTTGTTCTATTCTTAATATATGTATATAAATTATTGTAATACGG
EV531241       --> TAAATCTTTGTTCTATTCTTAATATATGTATATAAATTATTGTAATACGG
EV543210       --> TAAATCTTTGTTCTATTCTTAATATATGTATATAAATTATTGTAATACGG
FD965306       --> TAAATCTTTGTTCTATTCTTAATATATGTATATAAATTATTGTAATACGG
EX892944       --> TAAATCTTTGTTCTATTCTTAATTTATGTATATAAATTATTGTAATACGG
EX899032       --> TAAATCTTTGTTCTATTCTTAATATATGTATATAAATTATTGTAATACGG
EY920275       --> TAAATCTTTGTTCTATTCTTAATATATGTATATAAATTATTGTAATACGG
FD583560       --> TAAATCCTTGTTCTATTCTTAATTTATGTATATAAATTATTGTAATACGG
FD960537       --> TAAATCTTTGTTCTATTCTTAATATATGTATATAAATTATTGTAATACGG
FD959403       --> TAAATCTTTGTTCTATTCTTAATATATGTATATAAATTATTGTAATACGG
EX906052       --> ..................................................

               751    -    801
UN22706        --> AATTATAATTCACTTTTTTT--CTGTATCTGCATAAAATCACAATTTTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714735       <-- ..................................................  Raphanus sativus var. oleiformis
EY915657       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY437381       <-- ..................................................  Raphanus sativus cv GSK3-1
EY898121       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY930249       <-- ..................................................  Raphanus sativus var. oleiformis
FY428441       <-- AATTATAATTCACTTTTTTTTTCTGTATCTGCATAAAATCACAATTTTAT  Raphanus sativus cv GSK3-1
EV536702       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV526866       <-- AATTATAATTCACTTTTTTT--CTGTATCTGCATAAAATCACAATTTTAT  Raphanus raphanistrum subsp. maritimus
FD961085       <-- AATTATAATTCACTTTTTTT--CCGTATCTGCATAAAATCACAATTTTAT  Raphanus raphanistrum subsp. maritimus
EX889152       <-- AATTATAATTTACTTTTTTTttctgtcc......................  Raphanus sativus var. oleiformis
EV526718       <-- AATTATAATTCACTTTTTTT--CTGTATCTGCATAAAATCACAATTTTAT  Raphanus raphanistrum subsp. maritimus
FY436336       <-- AATTATAATTCACTTTTTTTTTCTGTATCTGCATAAAATCACAATTTTAT  Raphanus sativus cv GSK3-1
EY924660       <-- AATTATAATTCACTTTTTTTTTCTGTATCTGCATAAAATCACAATTTTAT  Raphanus raphanistrum subsp. landra
EX894760       <-- AATTATAATTCACTTTTTTT--CTGTATCTGCATAAAATCACAATTTTAT  Raphanus sativus cv Early Scarlet Globe
EV539424       <-- AATTATAATTCACTTTTTTT--CTGTATCTGCATAAAATCACAATTTTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD579608       <-- AATTATAATTCACTTTTTTTTTCTGTATCTGCATAAAATCACAATTTTAT  Raphanus sativus cv Rat-Tail Radish #3870
EW735569       <-- AATTATAATTCACTTTTTTT--CTGTATCTGCATAAAATCACAATTTTAT  Raphanus sativus cv Rat-Tail Radish #3870
FD964569       <-- AATTATAATTCACTTTTTTT--CTGTATCTGCATAAAATCACAATTTTAT  Raphanus raphanistrum subsp. maritimus
EX909685       <-- ...........ttTTTTTTT--CTGTATTTGCATAAAATCACAATTTTAT  Raphanus sativus cv Rat-Tail Radish #3870
EY948537       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY900615       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV541087       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW739645       --> AATTATAATTCACTTTTTTT--CTGTATCTGCATAAAATCACAATTTT..  Raphanus sativus cv Rat-Tail Radish #3870
EY911462       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY926490       --> ..................................................  Raphanus sativus var. oleiformis
EY894270       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW719535       --> ..................................................  Raphanus sativus var. oleiformis
EV531128       --> AATTATAATTCACTTTTTTT--CTGTATCTGCATAAAATCACAATTTTAT  Raphanus raphanistrum subsp. maritimus
EV531241       --> AATTATAATTCACTTTTTTT--CTGTATCTGCATAAAATCACAATTTTAT  Raphanus raphanistrum subsp. maritimus
EV543210       --> AATTATAATTCACTTTTTTT--CTGTATCTGCATAAAATCACAATTTTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD965306       --> AATTATAATTCACTTTTTTT--CCGTATCTGCATAAAATCACAATTTTAT  Raphanus raphanistrum subsp. maritimus
EX892944       --> AATTATAATTTACTTTTTTTttctgtcc......................  Raphanus sativus var. oleiformis
EX899032       --> AATTATAATTCACTTTTTTT--CTGTATCTGCATAAAATCACAATTTTAT  Raphanus sativus cv Early Scarlet Globe
EY920275       --> AATTATAATTCACTTTTTTTTTCTGTATCTGCATAAAATCACAATTTTAT  Raphanus raphanistrum subsp. landra
FD583560       --> AATTATAATTCACTTTTTTTTTCTGTATCTGCATAAAATCACAATTTTAT  Raphanus sativus cv Rat-Tail Radish #3870
FD960537       --> AATTATAATTCACTTTTTTT--CTGTATCTGCATAAAATCACAATTTTAT  Raphanus raphanistrum subsp. maritimus
FD959403       --> AATTATAATTCACTTTTTTT--CTGTATCTGCATAAAATCACAATTTTAT  Raphanus raphanistrum subsp. maritimus
EX906052       --> ...........ttTTTTTTT--CTGTATCTGCATAAAATCACAATTTTAT  Raphanus sativus cv Rat-Tail Radish #3870

               801    -    851
UN22706        --> TTAGTAGTAAAAAAAAAAAAGACAAATCGTTTTTTT-ACAGTAACTTAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714735       <-- ..................................................  Raphanus sativus var. oleiformis
EY915657       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY437381       <-- ..................................................  Raphanus sativus cv GSK3-1
EY898121       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY930249       <-- ..................................................  Raphanus sativus var. oleiformis
FY428441       <-- TTAGTAGTAAAAAAAAAAAAGACAAATCGTTTTTTT-ACAGTAACTTAGT  Raphanus sativus cv GSK3-1
EV536702       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV526866       <-- TTAGTAGTAAAAAAAAAAA-GACAAATCGTTTTTTT-ACAGTAACTTAGT  Raphanus raphanistrum subsp. maritimus
FD961085       <-- TTAGTAGc..........................................  Raphanus raphanistrum subsp. maritimus
EX889152       <-- ..................................................  Raphanus sativus var. oleiformis
EV526718       <-- TTAGTAGTAAAAAAAAAAA-GACAAATCGTTTTTTT-ACAGTAACTTAGT  Raphanus raphanistrum subsp. maritimus
FY436336       <-- TTAGTAGTAAAAAAAAAAA-GACAAATCGTTTTTTT-ACAGTAACTTAGT  Raphanus sativus cv GSK3-1
EY924660       <-- TTAGTAGTAAAAAAA---AAGACAAATCGTTTTTTT-ACAGTAACTTAGT  Raphanus raphanistrum subsp. landra
EX894760       <-- TTAGTAGTAAAAAAA---AAGACAAATCGTTTTTTT-ACAGTAACTTAGT  Raphanus sativus cv Early Scarlet Globe
EV539424       <-- TTAGTAGTAAAAAAAAAAAAGACAAATCGTTTTTTT-ACAGTAACTTAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD579608       <-- TTAGTAGTAAAAAAAAAAAAGACAAATCGTTTTTTTTACAGTAACTTAGT  Raphanus sativus cv Rat-Tail Radish #3870
EW735569       <-- TTAGTAGTAAAAAAAAAAAAGACAAATCGTTTTTTT-ACAGTAACTTAGT  Raphanus sativus cv Rat-Tail Radish #3870
FD964569       <-- TTAGTAGTAAAAAAAAA--AGACAAATCGTTTTTTT-ACAGTAACTTAGT  Raphanus raphanistrum subsp. maritimus
EX909685       <-- TTAGTAGTAAAAAAAAAAA-GACATATCGTTTTTTT-ACAGTAACTTAGT  Raphanus sativus cv Rat-Tail Radish #3870
EY948537       <-- .............................TTTTTTT-ACAGTAACTTAGT  Raphanus sativus cv Rat-Tail Radish #3870
EY900615       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV541087       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW739645       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY911462       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY926490       --> ..................................................  Raphanus sativus var. oleiformis
EY894270       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW719535       --> ..................................................  Raphanus sativus var. oleiformis
EV531128       --> TTAGTAGTAAAAAAAAAAA-GACAAATCGTTTTTTT-ACAGTAACTTAGT  Raphanus raphanistrum subsp. maritimus
EV531241       --> TTAGTAGT..........................................  Raphanus raphanistrum subsp. maritimus
EV543210       --> TTAGTAGTAAAAAAAAAAAAGACAAATCGTTTTTTT-ACAGTAACTTAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD965306       --> TTAGTAGc..........................................  Raphanus raphanistrum subsp. maritimus
EX892944       --> ..................................................  Raphanus sativus var. oleiformis
EX899032       --> TTAGTAGTAAAAAAAAA---GACAAATCGTTTTTTT-ACAGTAACTTAGT  Raphanus sativus cv Early Scarlet Globe
EY920275       --> TTAGTAGTAAAAAAAAA---GACAAATCGTTTTTTT-ACAGTAACTTAGT  Raphanus raphanistrum subsp. landra
FD583560       --> TTAGTAGTAAAAAAAAAAAAGACAAATCGTTTTTTTTACAGTAACTTAGT  Raphanus sativus cv Rat-Tail Radish #3870
FD960537       --> TTAGTAGTAAAAAAAAAA--GACAAATCGTTTTTTT-ACAGTAACTTAGT  Raphanus raphanistrum subsp. maritimus
FD959403       --> TTAGTAGTAAAAAAAAAAAAGACAAATCGTTTTTTT-ACAGTAACTTAGT  Raphanus raphanistrum subsp. maritimus
EX906052       --> TTAGTAGTAAAAAAAAAAA-GACATATCGTTTTTTT-ACAGTAACTTAGT  Raphanus sativus cv Rat-Tail Radish #3870

               851    -    901
UN22706        --> AATATTATTTAATAACTTCTAATTTTTT-GATTTGAATATATATTTCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714735       <-- ..................................................
EY915657       <-- ..................................................
FY437381       <-- ..................................................
EY898121       <-- ..................................................
EY930249       <-- ..................................................
FY428441       <-- AATATTATTTAATAACTTCTAATTTTTT-GATTTGAATATATATTTCTTT
EV536702       <-- ..................................................
EV526866       <-- AATATTATTTAATAACTTCTAATTTTTTTGATTTGAATATATATTTCTTT
FD961085       <-- ..................................................
EX889152       <-- ..................................................
EV526718       <-- AATATTATTTAATAACTTCTAATTTTTTTGATTTGAATATATATTTCTTT
FY436336       <-- AATATTATTTAATAACTTCTAATTTTTT-GATTTGAATATATATTTCTTT
EY924660       <-- AATATTATTTAATAACTTCTAATTTTTT-GATTTGAATATATATTTCTTT
EX894760       <-- AATATTATTTAATAACTTCTAATTTTTT-GATTTGAATATATATTTCTTT
EV539424       <-- AATATTATTTAATAACTTCTAATTTTTT-GATTTGAATATATATTTCTTT
FD579608       <-- AATATTATTTAATAACTTCTAATTTTTT-GATTTGAATATATATTTCTTT
EW735569       <-- AATATTATTTAATAACTTCTAATTTTTT-GATTTGAATATATATTTCTTT
FD964569       <-- AATATTATTTAATAACTTCTAATTTTTT-GATTTGAATATATATTTCTTT
EX909685       <-- AATATTATTTAATAACTTCTAATTTTTT-GATTTGAATATATATTTCTTT
EY948537       <-- AATATTATTTAATAACTTCTAATTTTTT-GATTTGAATATATATTTCTTT
EY900615       <-- ..................................................
EV541087       --> ..................................................
EW739645       --> ..................................................
EY911462       --> ..................................................
EY926490       --> ..................................................
EY894270       --> ..................................................
EW719535       --> ..................................................
EV531128       --> AATATTATTTAATAACTTCTAATTTTTTTGATTTGAATATATATTTCTTT
EV531241       --> ..................................................
EV543210       --> AATATTATTTAATAACTTCTAATTTTTT-GATTTGAATATATATTTCTTT
FD965306       --> ..................................................
EX892944       --> ..................................................
EX899032       --> AATATTATTTAATAACTTCTAATTTTTT-GATTTGg..............
EY920275       --> AATATTATTTAATAACTTCTAATTTTTT-GATTTGAATATATATTTCTTT
FD583560       --> AATATTATTTAATAACTTCTAATTTTTT-GATTTGAATATATATTTCTTT
FD960537       --> AATATTATTTAATAACTTCTAATTTTTT-GATTTGAATATATATTTCTTT
FD959403       --> AATATTATTTAATAACTTCTAATTTTTT-GATTTc...............
EX906052       --> AATATTATTTAATAACTTCTAATTTTTT-GATTTGAATATATATTTCTTT

               901    -    951
UN22706        --> TCAATCAAAGGTTTATGAAGGATTATACTAATTCGAAAAAATTTCTATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714735       <-- ..................................................
EY915657       <-- ..................................................
FY437381       <-- ..................................................
EY898121       <-- ..................................................
EY930249       <-- ..................................................
FY428441       <-- TCAATCAAAGGTTTATGAAGGATTATACTAATTCGAAAAAATTTCTATTT
EV536702       <-- ..................................................
EV526866       <-- TCAATCAAAGGTTTATGAAGGATTATACTAATTCGAAAAAATTTCTATTT
FD961085       <-- ..................................................
EX889152       <-- ..................................................
EV526718       <-- TCAATCAAAGGTTTATGAAGGATTATACTAATTCGAAAAAATTTCTATTT
FY436336       <-- TCAATCAAAGGTTTATGAAGGATTATACTAATTCGAAAAAATTTCTATTT
EY924660       <-- TCAATCAAAGGTTTATGAAGGATTATACTAATTCGAAAAAATTTCTATTT
EX894760       <-- TCAATCAAAGGTTTATGAAGGATTATACTAATTCGAAAAAATTTCTATTT
EV539424       <-- TCAATCAAAGGTTTATGAAGGATTATACTAATTCGAAAAAATTTCTATTT
FD579608       <-- TCAATCAAAGGTTTATGAAGGATTATACTAATTCGAAAAAATTTCTATTT
EW735569       <-- TCAATCAAAGGTTTATGAAGGATTATACTAATTCGAAAAAATTTCTATTT
FD964569       <-- TCAATCAAAGGTTTATGAAGGATTATACTAATTCGAAAAAATTTCTATTT
EX909685       <-- TCAATCAAAGGTTTATGAAGGATTATACTAATTCGAAAAAATTTCTATTT
EY948537       <-- TCAATCAAAGGTTTATGAAGGATTATACTAATTCGAAAAAATTTCTATTT
EY900615       <-- ..................................................
EV541087       --> ..................................................
EW739645       --> ..................................................
EY911462       --> ..................................................
EY926490       --> ..................................................
EY894270       --> ..................................................
EW719535       --> ..................................................
EV531128       --> TCAATCAAAGGTTTATGAAGGATTATACTAATTCGAAAAAATTTCTATTT
EV531241       --> ..................................................
EV543210       --> TCAATCAAAGGTTTATGAAGGATTATACTAATTCGAAAAAATTTCTATTT
FD965306       --> ..................................................
EX892944       --> ..................................................
EX899032       --> ..................................................
EY920275       --> TCAATCAAAGGTTTATGAAGGATTATACTAATTCGAAAAAATTTCTATTT
FD583560       --> TCAATCAAAGGTTTATGAAGGATTATACTAATTCGAAAAAATTTCTATTT
FD960537       --> TCAATCAAAGGTTTATGAAGGATTATACTAATTCGAAAAAATTTCTATTT
FD959403       --> ..................................................
EX906052       --> TCAATCAAAGGTTTATGAAGGATTATACTAATTCGAAAAAATTTCTATTT

               951    -   1001
UN22706        --> AAGTTTGAAATAATGCGCTTTTTTATTATCCCCTTTGAAAAAAATATATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714735       <-- ..................................................  Raphanus sativus var. oleiformis
EY915657       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY437381       <-- ..................................................  Raphanus sativus cv GSK3-1
EY898121       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY930249       <-- ..................................................  Raphanus sativus var. oleiformis
FY428441       <-- AAGTTTGAAATAATGCGCCTTTTTATTATCCCCTTg..............  Raphanus sativus cv GSK3-1
EV536702       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV526866       <-- AAGTTTGAAATAATGCGCTTTTTTATTATCCCCTTTGAAAAAAATATATA  Raphanus raphanistrum subsp. maritimus
FD961085       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX889152       <-- ..................................................  Raphanus sativus var. oleiformis
EV526718       <-- AAGTTTGAAATAATGCGCTTTTTTATTATCCCCTTTGAAAAAAATATATA  Raphanus raphanistrum subsp. maritimus
FY436336       <-- AAGTTTGAAATAATGCGCCTTTTTATTATCCCCTTTGAAAAAAATATATA  Raphanus sativus cv GSK3-1
EY924660       <-- AAGTTTGAAATAATGCGCCTTTTTATTATCCCCTTTGAAAAAAATATATA  Raphanus raphanistrum subsp. landra
EX894760       <-- AAGTTTGAAATAATGCGCCTTTTTATTATCCCCTTTGAAAAAAATATATA  Raphanus sativus cv Early Scarlet Globe
EV539424       <-- AAGTTTGAAATAATGCGCTTTTTTATTATCCCCTTTGAAAAAAATATATA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD579608       <-- AAGTTTGAAATAATGCGCTTTTTTATTATCCCCTTTGAAAAAAAAATATA  Raphanus sativus cv Rat-Tail Radish #3870
EW735569       <-- AAGTTTGAAATAATGCGCTTTTTTATTATCCCCTTTGAAAAAAATATATA  Raphanus sativus cv Rat-Tail Radish #3870
FD964569       <-- AAGTTTGAAATAATGCGCTTTTTTATTATCCCCTTTGAAAAAA-TATATA  Raphanus raphanistrum subsp. maritimus
EX909685       <-- AAGTTTGAAATAATGCGCTTTTTTATTATCCCCTTTG.............  Raphanus sativus cv Rat-Tail Radish #3870
EY948537       <-- AAGTTTGAAATAATGCGCCTTTTTATTATCCCCTTTGAAAAAAATATATA  Raphanus sativus cv Rat-Tail Radish #3870
EY900615       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV541087       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW739645       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY911462       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY926490       --> ..................................................  Raphanus sativus var. oleiformis
EY894270       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW719535       --> ..................................................  Raphanus sativus var. oleiformis
EV531128       --> AAGTTTGAAATAATGCGCTTTTTTATTATCCCCTTTGAAAAAAATATATA  Raphanus raphanistrum subsp. maritimus
EV531241       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV543210       --> AAGTTTGAAATAATGCGCTTTTTTATTATCCCCTTTGAAAAAAATATATA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD965306       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX892944       --> ..................................................  Raphanus sativus var. oleiformis
EX899032       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY920275       --> AAGTTTGAAATAATGCGCCTTTTTATTATCCCCTTTGAAAAAAATATATA  Raphanus raphanistrum subsp. landra
FD583560       --> AAGTTTGAAATAATGCGCTTTTTTATTATCCCCTTTGAAAAAAAaa....  Raphanus sativus cv Rat-Tail Radish #3870
FD960537       --> AAGTTTGAAATAATGCGCTTTTTTATTATCCCCTTTGAAAAAA-TATATA  Raphanus raphanistrum subsp. maritimus
FD959403       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX906052       --> AAGTTTGAAATAATGCGCTTTTTTATTATCCCCTTTG.............  Raphanus sativus cv Rat-Tail Radish #3870

               1001   -   1051
UN22706        --> TATATACAAACCAGTGAATAAGAAATAATAAATTTAAGAATAAAATAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714735       <-- ..................................................
EY915657       <-- ..................................................
FY437381       <-- ..................................................
EY898121       <-- ..................................................
EY930249       <-- ..................................................
FY428441       <-- ..................................................
EV536702       <-- ..................................................
EV526866       <-- TATATACAAACCAGTGAATAAGAAATAATAAATTTAAGAATAAAATAAAA
FD961085       <-- ..................................................
EX889152       <-- ..................................................
EV526718       <-- TATATACAAACCAGTGAATAAGAAATAATAAATTTAAGAATAAAATAAAA
FY436336       <-- TATATACAAACCAGTGAATAAGAAATAATAAATTTAAGAATAAAATAAAA
EY924660       <-- TATATACAAACCAGTGAATAAGAAATAATAAATTTAAGAATAAAATAAAA
EX894760       <-- TATATACAAACCAGTGAATAAGAAATAATAAATTTAAGAATAAAATAAAA
EV539424       <-- TATATACAAACCAGTGAATAAGAAATAATAAATTTAAGAATAAAATAAAA
FD579608       <-- TATATACAAACCAGTGAATAAGAAATAATAAATTTAAGAATAAAATAAAA
EW735569       <-- TATATACAAACCAGTGAATAAGAAATAATAAATTTAAGAATAAAATAAAA
FD964569       <-- TATATACAAACCAGTGAATAAGAAATAATAAATTTAAGAATAAAATAAAA
EX909685       <-- ..................................................
EY948537       <-- TATATACAAACCAGTGAATAAGAAATAATAAATTTAAGAATAAAATAAAA
EY900615       <-- ..................................................
EV541087       --> ..................................................
EW739645       --> ..................................................
EY911462       --> ..................................................
EY926490       --> ..................................................
EY894270       --> ..................................................
EW719535       --> ..................................................
EV531128       --> TATATACAAACCAGTGAATAAGAAATAATAAATTTAAGAATAAAATAAAA
EV531241       --> ..................................................
EV543210       --> TATATACAAACCAGTGAATAAGAAATAAT.....................
FD965306       --> ..................................................
EX892944       --> ..................................................
EX899032       --> ..................................................
EY920275       --> TATATACAAACCAGTGAATAAGAAATAATAAATTTAAGAATAAAATAAAA
FD583560       --> ..................................................
FD960537       --> TATATACAAACCAGTGAATAAAAAATAATAAATTTAAAAATAAAATAAAA
FD959403       --> ..................................................
EX906052       --> ..................................................

               1051   -   1101
UN22706        --> AGGGTTTTTT-ATTTTATGGAACATACATATCAATATTCATGGATCATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714735       <-- ..................................................
EY915657       <-- ..................................................
FY437381       <-- ..................................................
EY898121       <-- ..................................................
EY930249       <-- ..................................................
FY428441       <-- ..................................................
EV536702       <-- ..................................................
EV526866       <-- AGGGTTTTTT-ATTTTATGGAACATACATATCAATATTCATGGATCATCC
FD961085       <-- ..................................................
EX889152       <-- ..................................................
EV526718       <-- AGGGTTTTTT-ATTTTATGGAACATACATATCAATATTCATGGATCATCC
FY436336       <-- AGGGTTTTTT-ATTTTATGGAACATACATATCAATATTCATGGATCATCC
EY924660       <-- AGGGTTTTTTTATTTTATGGAACATACATATCAATATTCATGGATCATCC
EX894760       <-- AGGGTTTTTT-ATTTTATGGAACATACATATCAATATTCATGGATCATCC
EV539424       <-- AGGGTTTTTT-ATTTTATGGAACATACATATCAATATTCATGGATCATCC
FD579608       <-- AGGGTTTTTT-ATTTTATGGAACATACATATCAATATTCATGGATCATCC
EW735569       <-- AGGGTTTTTT-ATTTTATGGAACATACATATCAATATTCATGGATCATCC
FD964569       <-- AGGGTTTTTT-ATTTTATGGAACATACATATCAATATTCATGGATAATCC
EX909685       <-- ..................................................
EY948537       <-- AGGGTTTTTT-ATTTTATGGAACATACATATCAATATTCATGGATCATCC
EY900615       <-- ...........ATTTTATGGAACATACATATCAATATTCATGGATCATCC
EV541087       --> ..................................................
EW739645       --> ..................................................
EY911462       --> ..................................................
EY926490       --> ..................................................
EY894270       --> ..................................................
EW719535       --> ..................................................
EV531128       --> AGGGTTTTTT-ATTTTATGGAACATACATATCAATATTCATGGATCATCC
EV531241       --> ..................................................
EV543210       --> ..................................................
FD965306       --> ..................................................
EX892944       --> ..................................................
EX899032       --> ..................................................
EY920275       --> AGGGTTTTTTTATTTTATGGAACATACATATCAATATTCATGGATCATCC
FD583560       --> ..................................................
FD960537       --> AGGGTTTTTT-ATTTTATGGAACATACATATCAATATTCATGGATAATCC
FD959403       --> ..................................................
EX906052       --> ..................................................

               1101   -   1151
UN22706        --> CTTTCATTCCACTCCCAGTACCTATTTTACTCGGAGCTGGACTTCTACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714735       <-- ..................................................  Raphanus sativus var. oleiformis
EY915657       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY437381       <-- ..................................................  Raphanus sativus cv GSK3-1
EY898121       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY930249       <-- ..................................................  Raphanus sativus var. oleiformis
FY428441       <-- ..................................................  Raphanus sativus cv GSK3-1
EV536702       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV526866       <-- CTTTCATTCCACTCCCc.................................  Raphanus raphanistrum subsp. maritimus
FD961085       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX889152       <-- ..................................................  Raphanus sativus var. oleiformis
EV526718       <-- CTTTCATTCCACTCCCc.................................  Raphanus raphanistrum subsp. maritimus
FY436336       <-- CTTTCATTCCACTTCCAGTACCTATTTTACTCGGAGCTGGACTTCTACTT  Raphanus sativus cv GSK3-1
EY924660       <-- CTTTCATTCCACTTCCAGTACCTATTTTACTCGGAGCTGGACTTCTACTT  Raphanus raphanistrum subsp. landra
EX894760       <-- CTTTCATTCCACTTCCAGTACCTATTTTACTCGGAGCTGGACTTCTACTT  Raphanus sativus cv Early Scarlet Globe
EV539424       <-- CTTTCATTCCACTCCCAGTACCTATTTTACTCGGAGCTGGACTTCTACTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD579608       <-- CTTTCATTCCACTTCCAGTACCTATTTTACTCGGAGCTGGACTTCTACTT  Raphanus sativus cv Rat-Tail Radish #3870
EW735569       <-- CTTTCATTCCACTCCCAGTACCTATTTTACTCGGAGCTGGATTTCTACTT  Raphanus sativus cv Rat-Tail Radish #3870
FD964569       <-- CTTTCATTCCACTCCCAGTACCTATTTTACTCGGAGCTGGACTTCTACTT  Raphanus raphanistrum subsp. maritimus
EX909685       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY948537       <-- CTTTCATTCCACTTCCAGTACCTATTTTACTCGGAGCTGGACTTCTACTT  Raphanus sativus cv Rat-Tail Radish #3870
EY900615       <-- CTTTCATTCCACTCCCAGTACCTATTTTACTCGGAGCTGGACTTCTACTT  Raphanus raphanistrum subsp. maritimus
EV541087       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW739645       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY911462       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY926490       --> ..................................................  Raphanus sativus var. oleiformis
EY894270       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW719535       --> ..................................................  Raphanus sativus var. oleiformis
EV531128       --> CTTTCAT...........................................  Raphanus raphanistrum subsp. maritimus
EV531241       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV543210       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD965306       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX892944       --> ..................................................  Raphanus sativus var. oleiformis
EX899032       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY920275       --> CTTTCATTCCACTTCCAGTACCTATTTTACTCGGAGCTGGACTTCT....  Raphanus raphanistrum subsp. landra
FD583560       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD960537       --> CTTTCATTCCACTCCCAGTACCTATTTTACTCGGAGCTGGACTTCTACTT  Raphanus raphanistrum subsp. maritimus
FD959403       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX906052       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               1151   -   1201
UN22706        --> TTTCCGACAGCAACAAAAAACCTTCGACGTATGTGGACGTTTCTGAGTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714735       <-- ..................................................
EY915657       <-- ..................................................
FY437381       <-- ..................................................
EY898121       <-- ..................................................
EY930249       <-- ..................................................
FY428441       <-- ..................................................
EV536702       <-- ..................................................
EV526866       <-- ..................................................
FD961085       <-- ..................................................
EX889152       <-- ..................................................
EV526718       <-- ..................................................
FY436336       <-- TTTCCGACAGCAACAAAAAACCTTCGACGTATGTGGACGTTTCTGAGTAT
EY924660       <-- TTTCCGACAGCAACAAAAAACCTTCGACGTATGTGGACGTTTCTGAGTAT
EX894760       <-- TTTCCGACAGCAACAAAAAACCTTCGACGTATGTGGACGTTTCTGAGTAT
EV539424       <-- TTTCCGACAGCAACAAAAAACCTTCGACGTATGTGGACGTTTCTGAGTAT
FD579608       <-- TTTCCGACAGCAACAAAAAACCTTCGACGTATGTGGACGTTTCTGAGTAT
EW735569       <-- TTTCCGACAGCAACAAAAAACCTTCGACGTATGTGGACGTTTCTGAGTAT
FD964569       <-- TTTCCGACAGCAACAAAAAACCTTCGACGTATGTGGACGTTTCTGAGTAT
EX909685       <-- ..................................................
EY948537       <-- TTTCCGACAGCAACAAAAAACCTTCGACGTATGTGGACGTTTCTGAGTAT
EY900615       <-- TTTCCGACAGCAACAAAAAACCTTCGACGTATGTGGACGTTTCTGAGTAT
EV541087       --> ..................................................
EW739645       --> ..................................................
EY911462       --> ..................................................
EY926490       --> ..................................................
EY894270       --> ..................................................
EW719535       --> ..................................................
EV531128       --> ..................................................
EV531241       --> ..................................................
EV543210       --> ..................................................
FD965306       --> ..................................................
EX892944       --> ..................................................
EX899032       --> ..................................................
EY920275       --> ..................................................
FD583560       --> ..................................................
FD960537       --> TTTCCGACAGCAACAAAAAACCTTCGACGTATGTGGACGTTTCTGAATAT
FD959403       --> ..................................................
EX906052       --> ..................................................

               1201   -   1251
UN22706        --> TTTTTTGTTAAGTATAGTTATGATCTTTTCGCTCTATCTATCTATTCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714735       <-- ..................................................
EY915657       <-- ..................................................
FY437381       <-- ..................................................
EY898121       <-- ..................................................
EY930249       <-- ..................................................
FY428441       <-- ..................................................
EV536702       <-- ..................................................
EV526866       <-- ..................................................
FD961085       <-- ..................................................
EX889152       <-- ..................................................
EV526718       <-- ..................................................
FY436336       <-- TTTTTTGTTAAGTATAGTTATGATCTTTTCGCTCTATCTATCTATTCAAC
EY924660       <-- TTTTTTGTTAAGTATAGTTATGATCTTTTCGCTCTATCTATCTATTCAAC
EX894760       <-- TTTTTTGTTAAGTATAGTTATGATCTTTTCGCTCTATCTATCTATTCAAC
EV539424       <-- TTTTTTGTTAAGTATAGTTATGATCTTTTCGCTCTATCTATCTATTCAAC
FD579608       <-- TTTTTTGTTAAGTATAGTTATGATTTTTTCGCTCTATCTATCTATTCAAC
EW735569       <-- TTTTTTGTTAAGTATAGTTATGATCTTTTCGCTCTATCTATCTATTCAAC
FD964569       <-- TTTTTTGTTAAGTATAGTTATGATCTTTTCGCTCTATCTATCTATTCAAC
EX909685       <-- ..................................................
EY948537       <-- TTTTTTGTTAAGTATAGTTATGATCTTTTCGCTCTATCTATCTATTCAAC
EY900615       <-- TTTTTTGTTAAGTATAGTTATGATCTTTTCGCTCTATCTATCTATTCAAC
EV541087       --> ..................................................
EW739645       --> ..................................................
EY911462       --> ..................................................
EY926490       --> ..................................................
EY894270       --> ..................................................
EW719535       --> ..................................................
EV531128       --> ..................................................
EV531241       --> ..................................................
EV543210       --> ..................................................
FD965306       --> ..................................................
EX892944       --> ..................................................
EX899032       --> ..................................................
EY920275       --> ..................................................
FD583560       --> ..................................................
FD960537       --> TTTTTTGTTAAGTATAGTTATGATCTTTTCGCTCTATCTATCTATTCAAC
FD959403       --> ..................................................
EX906052       --> ..................................................

               1251   -   1301
UN22706        --> AAATTTTTATAAGTTGCATTCATCAAAATGTATGGTCTTGGACCATAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714735       <-- ..................................................
EY915657       <-- ..................................................
FY437381       <-- ..................................................
EY898121       <-- ..................................................
EY930249       <-- ..................................................
FY428441       <-- ..................................................
EV536702       <-- ..................................................
EV526866       <-- ..................................................
FD961085       <-- ..................................................
EX889152       <-- ..................................................
EV526718       <-- ..................................................
FY436336       <-- AAATTTTTATAAGTTGCATTCATCAAAATGTATGGTCTTGGACCATAAAT
EY924660       <-- AAATTTTTATAAGTTGCATTCATCAAAATGTATGGTCTTGGACCATAAAT
EX894760       <-- AAATTTTTATAAGTTGCATTCATCAAAATGTATGGTCTTGGACCATAAAT
EV539424       <-- AAATTTTTATAAGTTGCATTCATCAAAATGTATGGTCTTGGACCATAAAT
FD579608       <-- AAATTTTTATAAGTTGCATTCATCAAAATGTATGGTCTTGGACCATAAAT
EW735569       <-- AAATTTTTATAAGTTGCATTCATCAAAATGTATGGTCTTGGACCATAAAT
FD964569       <-- AGATTTTTATAAGTTGCATTCATCAAAATGTATGGTCTTGGACCATAAAT
EX909685       <-- ..................................................
EY948537       <-- AAATTTTTATAAGTTGTATTCATCAAAATGTATGGTCTTGGACCATAAAT
EY900615       <-- AAATTTTTATAAGTTGCATTCATCAAAATGTATGGTCTTGGACCATAAAT
EV541087       --> ..................................................
EW739645       --> ..................................................
EY911462       --> ..................................................
EY926490       --> ..................................................
EY894270       --> ..................................................
EW719535       --> ..................................................
EV531128       --> ..................................................
EV531241       --> ..................................................
EV543210       --> ..................................................
FD965306       --> ..................................................
EX892944       --> ..................................................
EX899032       --> ..................................................
EY920275       --> ..................................................
FD583560       --> ..................................................
FD960537       --> AGATTTTTATAAGTTGCATTCATCAAAATGTATGGTCTTGGACCATAA..
FD959403       --> ..................................................
EX906052       --> ..................................................

               1301   -   1351
UN22706        --> AATGAATTTTCTTTTGAGTTCGGTTACTTTATTGATCCACTTACTTCTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714735       <-- ..................................................
EY915657       <-- ..................................................
FY437381       <-- ..................................................
EY898121       <-- ..................................................
EY930249       <-- ..................................................
FY428441       <-- ..................................................
EV536702       <-- ..................................................
EV526866       <-- ..................................................
FD961085       <-- ..................................................
EX889152       <-- ..................................................
EV526718       <-- ..................................................
FY436336       <-- AATGA.............................................
EY924660       <-- AATGAATTTTCTTTTGAGTTCGGTTACTTTAT..................
EX894760       <-- AATGAATTTTCTTTTGAGT--TGTTACTTTATTGATCCACT.........
EV539424       <-- AATGAATTTTCTTTTGAGTTCGGTTACTTTATTGATCCACTTACTTCc..
FD579608       <-- AATGAATTTTCTTTTGAGTTCc............................
EW735569       <-- AATGAATTTTCTTTTGAGTTCGGTTACTTTATTGATCCACTTACTTCc..
FD964569       <-- AATGAATTTTCTTTTGAGTTCGGTTACTTTATTGATCCACTTACTTCTAT
EX909685       <-- ..................................................
EY948537       <-- AATGAATTTTCTTTTGAGTTCGGTTACTTTATTGATCCACTTACTTCc..
EY900615       <-- AATGAATTTTCTTTTGAGTTCGGTTACTTTATTGATCCACTTACTTCc..
EV541087       --> ..................................................
EW739645       --> ..................................................
EY911462       --> ..................................................
EY926490       --> ..................................................
EY894270       --> ..................................................
EW719535       --> ..................................................
EV531128       --> ..................................................
EV531241       --> ..................................................
EV543210       --> ..................................................
FD965306       --> ..................................................
EX892944       --> ..................................................
EX899032       --> ..................................................
EY920275       --> ..................................................
FD583560       --> ..................................................
FD960537       --> ..................................................
FD959403       --> ..................................................
EX906052       --> ..................................................

               1351   -   1401
UN22706        --> TATGTCAATATTAATTACAACTGTTGGAATTTTGGTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714735       <-- .......................................
EY915657       <-- .......................................
FY437381       <-- .......................................
EY898121       <-- .......................................
EY930249       <-- .......................................
FY428441       <-- .......................................
EV536702       <-- .......................................
EV526866       <-- .......................................
FD961085       <-- .......................................
EX889152       <-- .......................................
EV526718       <-- .......................................
FY436336       <-- .......................................
EY924660       <-- .......................................
EX894760       <-- .......................................
EV539424       <-- .......................................
FD579608       <-- .......................................
EW735569       <-- .......................................
FD964569       <-- TATGTCAATATTAATTACAACTGTTGGAATTTTGGTTCC
EX909685       <-- .......................................
EY948537       <-- .......................................
EY900615       <-- .......................................
EV541087       --> .......................................
EW739645       --> .......................................
EY911462       --> .......................................
EY926490       --> .......................................
EY894270       --> .......................................
EW719535       --> .......................................
EV531128       --> .......................................
EV531241       --> .......................................
EV543210       --> .......................................
FD965306       --> .......................................
EX892944       --> .......................................
EX899032       --> .......................................
EY920275       --> .......................................
FD583560       --> .......................................
FD960537       --> .......................................
FD959403       --> .......................................
EX906052       --> .......................................