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Alignment for radish unigene UN22718

               1      -     51
UN22718        --> GGAATCGCGTAATCGATTTCAACAACTTGAACAGAGAGAGAGAAGAA-GA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911289       <-- ..................................................
EV530441       <-- ..................................................
FD937385       <-- ..................................................
FD552403       <-- ..................................................
FD565059       <-- ..................................................
FD547302       <-- ..................................................
FD553712       <-- ..................................................
EY894396       <-- ..................................................
EV539799       <-- ..................................................
FD545364       <-- ..................................................
FD537735       <-- ..................................................
FD536851       <-- ..................................................
EX891170       <-- ..................................................
EY895568       <-- ..................................................
EY899887       --> GGAATCGCGTAATCGATTTCAACAACTTGAACAGAGAGAGAGAAGAAAGA
EV525794       --> ......ggGTAATCGATTTCAACAACTTGAACACAGAGAGAGAAGAA---
EY898303       --> ......ggGTAATCGATTTCAACAACTTGAACAGAGAGAGAGAAGAA--A
EY949816       --> .........................................gagagA-GA
FD551402       --> ....................gggtaatcgatttcaacaacttgaacA-GA
FD560701       --> ................................gggatttcaacaacttga
FD557648       --> ..................................................
EX886887       --> ..................................................
EY915442       --> ..................................................
FD556035       --> ..................................................
EV550739       --> ..................................................
EV535028       --> ..................................................

               51     -    101
UN22718        --> GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTAAAGGAAGGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911289       <-- ..................................................
EV530441       <-- ..................................................
FD937385       <-- ..................................................
FD552403       <-- ..................................................
FD565059       <-- ..................................................
FD547302       <-- ..................................................
FD553712       <-- ..................................................
EY894396       <-- ..................................................
EV539799       <-- ..................................................
FD545364       <-- ..................................................
FD537735       <-- ..................................................
FD536851       <-- ..................................................
EX891170       <-- ..................................................
EY895568       <-- ..................................................
EY899887       --> GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTAAAGGAAGGGAG
EV525794       --> ---AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTAAAGGAAGGGAG
EY898303       --> GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTAAAGGAAGGGAG
EY949816       --> GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTAAAGGAAGGGAG
FD551402       --> GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTAAAGGAAGGGAG
FD560701       --> acagaAGAGAGA-AGAAAGAGAGAGAGAGAGAGAGAGTAAAGGAAGGGAG
FD557648       --> ..........GAGAGAGAGAGAGAGAGAGAGAGAGAGTAAAGGAAGGGAG
EX886887       --> ..................................................
EY915442       --> ..................................................
FD556035       --> ..................................................
EV550739       --> ..................................................
EV535028       --> ..................................................

               101    -    151
UN22718        --> AGTAACGAAGCCCTAATTTAAATCTTCTCGTCTGATCTGAAAAGTTCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911289       <-- ..................................................
EV530441       <-- ..................................................
FD937385       <-- ..................................................
FD552403       <-- ..................................................
FD565059       <-- ..................................................
FD547302       <-- ..................................................
FD553712       <-- ..................................................
EY894396       <-- ..................................................
EV539799       <-- ..................................................
FD545364       <-- ..................................................
FD537735       <-- ..................................................
FD536851       <-- ..................................................
EX891170       <-- ..................................................
EY895568       <-- ..................................................
EY899887       --> AGTAACGAAGCCCTAATTTAAATCTTCTCGTCTGATCTGAAAAGTTCCAT
EV525794       --> AGTAGCGAAGCCCTAATTTAAATCTTCTCGTCTGATCTGAAAAGTTCCAT
EY898303       --> AGTAACGAAGCCCTAATTTAAATCTTCTCGTCTGATCTGAAAAGTTCCAT
EY949816       --> AGTAACGAAGCCCTAATTTAAATCTTCTCATCTGATCTGAAAAGTTCCAT
FD551402       --> AGTAACGAAGCCCTAATTTAAATCTTCTCGTCTGATCTGAAAAGTTCCAT
FD560701       --> AGTAACGAAGCCCTAATTTAAATCTTCTCGTCTGATCTGAAAAGTTCCAT
FD557648       --> AGTAACGAAGCCCTAATTTAAATCTTCTCGTCTGATCTGAAAAGTTCCAT
EX886887       --> ..................................................
EY915442       --> ..................................................
FD556035       --> ..................................................
EV550739       --> ..................................................
EV535028       --> ..................................................

               151    -    201
UN22718        --> TTACTCAAATTCTTTTTT-GGATTTCTCTCACATGGCGTTTCGAAAAAA-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911289       <-- ..................................................
EV530441       <-- ..................................................
FD937385       <-- ..................................................
FD552403       <-- ..................................................
FD565059       <-- ..................................................
FD547302       <-- ..................................................
FD553712       <-- ..................................................
EY894396       <-- ..................................................
EV539799       <-- ..................................................
FD545364       <-- ..................................................
FD537735       <-- ..................................................
FD536851       <-- ..................................................
EX891170       <-- ..................................................
EY895568       <-- ..................................................
EY899887       --> TTACTCAAATTCTTTTTT-GGATTTCTCTCACATGGCGTTTCGAAAAAA-
EV525794       --> TTACTCAAATTCTTTTTT-GGATTTCTCTCACATGGCGTTTCGAAAAAA-
EY898303       --> TTACTCAAATTCTTTTTT-GGATTTCTCTCACATGGCGTTTCGAAAAAA-
EY949816       --> TTACTCAAATTCTTTTTT-GGATTTCTCTCACATGGCGTTTCGAAAAAA-
FD551402       --> TTACTCAAATTCTTTTTT-GGATTTCTCTCACATGGCGTTTCGAAAAAA-
FD560701       --> TTACTCAAATTCTTTTTTTGGATTTCTCTCACATGGCGTTTCGAAAAAA-
FD557648       --> TTACTCAAATTCTTTTTT-GGATTTCTCTCACATGGCGTTTCGAAAAAA-
EX886887       --> ............TTTTTT-GGATTTCTCTCACATGGCGTTTCGAAAAAA-
EY915442       --> ............TTTTTT-GGATTTCTCTCACATGGCGTTTCGAAAAAA-
FD556035       --> ............TTTTTT-GGATTTCTCTCACATGGCGTTTCGAAAAAA-
EV550739       --> ...................GGATTTCTCTCACATGGCGTTTCGAAAAAAA
EV535028       --> ..................................................

               201    -    251
UN22718        --> CTGTGGGCTGGAGCTCTTGGCAGCTTCTCTGACCCTAACCTTTGTTCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911289       <-- ..................................................
EV530441       <-- ..................................................
FD937385       <-- ..................................................
FD552403       <-- ..................................................
FD565059       <-- ..................................................
FD547302       <-- ..................................................
FD553712       <-- ..................................................
EY894396       <-- ..................................................
EV539799       <-- ..................................................
FD545364       <-- ..................................................
FD537735       <-- ..................................................
FD536851       <-- ..................................................
EX891170       <-- ..................................................
EY895568       <-- ..................................................
EY899887       --> CTGTGGGCTGGAGCTCTTGGCAGCTTCTCTGACCCTAACCTTTGTTCTGA
EV525794       --> CTGTGGGCTGGAGCTCTTGGCAGCTTCTCTGACCCTAACCTTTGTTCTGA
EY898303       --> CTGTGGGCTGGAGCTCTTGGCAGCTTCTCTGACCCTAACCTTTGTTCTGA
EY949816       --> CTGTGGGCTGGAGCTCTTGGCAGCTTCTCTGACCCTAACCTTTGTTCTGA
FD551402       --> CTGTGGGCTGGAGCTCTTGGCAGTTTCTCTGACCCTAACCTTTGTTCTGA
FD560701       --> CTGTGGGCTGGAGCTCTTGGCAGCTTCTCTGACCCTAACCTTTGTTCTGA
FD557648       --> CTGTGGGCTGGAGCTCTTGGCAGCTTCTCTGACCCTAACCTTTGTTCTGA
EX886887       --> CTGTGGGCTGGAGCTCTTGGCAGCTTCTCTGACCCTAACCTTTGTTCTGA
EY915442       --> CTGTGGGCTGGAGCTCTTGACAGCTTCTCTGACCCTAACCTTTGTTCTGA
FD556035       --> CTGTGGGCTGGAGCTCTTGGCAGCTTCTCTGACCCTAACCTTTGTTCTGA
EV550739       --> CTGTGGGCTGGAGCTCTTGGCAGCTTCTCTGACCCTAACCTTTGTTCTGA
EV535028       --> ..................................................

               251    -    301
UN22718        --> TTAACCTGGTGGATGCGAACTCAGATGGAGATGCTCTCTACGCTCTTCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911289       <-- .........TGGATGCGAACTCAGATGGAGATGCTCTCTACGCTCT-CGA
EV530441       <-- ..........GGATGCGAACTCAGATGGAGATGCTCTCTACGCTCTTCGA
FD937385       <-- ............................AGATGCTCTCTACGCTCTTCGA
FD552403       <-- ..................................................
FD565059       <-- ..................................................
FD547302       <-- ..................................................
FD553712       <-- ..................................................
EY894396       <-- ..................................................
EV539799       <-- ..................................................
FD545364       <-- ..................................................
FD537735       <-- ..................................................
FD536851       <-- ..................................................
EX891170       <-- ..................................................
EY895568       <-- ..................................................
EY899887       --> TTAACCTGGTGGATGCGAACTCAGATGGAGATGCTCTCTACGCTCTTCGA
EV525794       --> TTAACCTGGTGGATGCGAACTCAGATGGAGATGCTCTCTACGCTCTTCGA
EY898303       --> TTAACCTGGTGGATGCGAACTCAGATGGGGATGCTCTCTACGCTCTTCGA
EY949816       --> TTAACCTGGTGGATGCGAACTCAGATGGAGATGCTCTCTACGCTCTTCGA
FD551402       --> TTAACCTGGTGGATGCGAACTCAGATGGAGATGCTCTCTACGCTCTTCGA
FD560701       --> TTAACCTGGTGGATGCGAACTCAGATGGAGATGCTCTCTACGCTCTTCGA
FD557648       --> TTAACCTGGTGGATGCGAACTCAGATGGAGATGCTCTCTACGCTCTTCGA
EX886887       --> TTAACCTGGTGGATGCGAACTCAGATGGAGATGCTCTCTACGCTCTTCGA
EY915442       --> TTAACCTGGTGGATGCGAACTCAGATGGAGATGCTCTCTACGCTCTTCGA
FD556035       --> TTAACCTGGTGGATGCGAACTCAGATGGAGATGCTCTCTACGCTCTTCGA
EV550739       --> TTAACCTGGTGGATGCGAACTCAGATGGAGATGCTCTCTACGCTCTTCGA
EV535028       --> ..................................................

               301    -    351
UN22718        --> CAGAGCTTGTCGGATCCAGACCATGTGCTCCAGAGCTGGGATCAGAATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911289       <-- CAGAGCTTGTCGGATCCAGACCATGTGCTCCAGAGCTGGGATCAGAATCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV530441       <-- CAGAGCTTGTCGGATCCAGACCATGTGCTCCAGAGCTGGGATCAGAATCT  Raphanus raphanistrum subsp. maritimus
FD937385       <-- CAGAGCTTGTCGGATCCCGACCATGTGCTCCAGAGCTGGGATCAGAATCT  Raphanus sativus var. oleiformis
FD552403       <-- CAGAGCTTGTCGGATC-AGACCATGTGCTCCAGAGCTGGGATCAGAATCT  Raphanus raphanistrum subsp. landra
FD565059       <-- .AGAGCTTGTCGGATCCCGACCATGTGCTCCAGAGCTGGGATCAGAATCT  Raphanus sativus var. oleiformis
FD547302       <-- .......TGTCGGATCCAGACCATGTGCTCCAGAGCTGGGATCAGAATCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553712       <-- ..........CGGATCCAGACCATGTGCTCCAGAGCTGGGATCAGAATCT  Raphanus raphanistrum subsp. landra
EY894396       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV539799       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545364       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537735       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536851       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX891170       <-- ..................................................  Raphanus sativus var. oleiformis
EY895568       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY899887       --> CAGAGCTTGTCGGATCCAGACCATGTGCTCCAGAGCTGGGATCAGAATCT  Raphanus raphanistrum subsp. maritimus
EV525794       --> CAGAGCTTGTCGGATCCAGACCATGTGCTCCAGAGCTGGGATCAGAATCT  Raphanus raphanistrum subsp. maritimus
EY898303       --> CAGAGCTTGTCGGATCCAGACCATGTGCTCCAGAGCTGGGATCAGAATCT  Raphanus raphanistrum subsp. maritimus
EY949816       --> CAGAGCTTGTCGGATCCCGACCATGTGCTCCAGAGCTGGGATCAGAATCT  Raphanus sativus cv Rat-Tail Radish #3870
FD551402       --> CAGAGCTTGTCGGATCCAGACCATGTGCTCCAGAGCTGGGATCAGAATCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD560701       --> CAGAGCTTGTCGGATCCCGACCATGTGCTCCAGAGCTGGGATCAGAATCT  Raphanus sativus var. oleiformis
FD557648       --> CAGAGCTTGTCGGATCCAGACCATGTGCTCCAGAGCTGGGATCAGAATCT  Raphanus raphanistrum subsp. landra
EX886887       --> CAGAGCTTGTCGGATCCCGACCATGTGCTCCAGAGCTGGGATCAGAATCT  Raphanus sativus var. oleiformis
EY915442       --> CAGAGCTTGTCGGATCCAGACCATGTGCTCCAGAGCTGGGATCAGAATCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556035       --> CAGAGCTTGTCGGATC-AGACCATGTGCTCCAGAGCTGGGATCAGAATCT  Raphanus raphanistrum subsp. landra
EV550739       --> CAGAGCTTGTCGGATCCAGACCATGTGCTCCAGAGCTGGGATCAGAATCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV535028       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               351    -    401
UN22718        --> TGTTACTCCTTGCACCTGGTTCCATGTCACCTGTAATCAAGACAACCGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911289       <-- TGTTACTCCTTGCACCTGGTTCCATGTCACCTGTAATCAAGACAACCGCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV530441       <-- TGTTACTCCTTGCACCTGGTTCCATGTCACCTGTAATCAAGACAACCGCG  Raphanus raphanistrum subsp. maritimus
FD937385       <-- TGTTACTCCGTGCACCTGGTTCCATGTCACCTGTAATCAAGACAACCGCG  Raphanus sativus var. oleiformis
FD552403       <-- TGTTACTCCTTGCACCTGGTTCCATGTCACCTGTAATCAAGACAACCGCG  Raphanus raphanistrum subsp. landra
FD565059       <-- TGTTACTCCGTGCACCTGGTTCCATGTCACCTGTAATCAAGACAACCGCG  Raphanus sativus var. oleiformis
FD547302       <-- TGTTACTCCTTGCACCTGGTTCCATGTCACCTGTAATCAAGACAACCGCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553712       <-- TGTTACTCCTTGCACCTGGTTCCATGTCACCTGTAATCAAGACAACCGCG  Raphanus raphanistrum subsp. landra
EY894396       <-- ..................................AATCAAGACAACCGCG  Raphanus raphanistrum subsp. maritimus
EV539799       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545364       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537735       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536851       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX891170       <-- ..................................................  Raphanus sativus var. oleiformis
EY895568       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY899887       --> TGTTACTCCTTGCACCTGGTTCCATGTCACCTGTAATCAAGACAACCGCG  Raphanus raphanistrum subsp. maritimus
EV525794       --> TGTTACTCCTTGCACCTGGTTCCATGTCACCTGTAATCAAGACAACCGCG  Raphanus raphanistrum subsp. maritimus
EY898303       --> TGTTACTCCTTGCACCTGGTTCCATGTCACCTGTAATCAAGACAACCGCG  Raphanus raphanistrum subsp. maritimus
EY949816       --> TGTTACTCCGTGCACCTGGTTCCATGTCACCTGTAATCAAGACAACCGCG  Raphanus sativus cv Rat-Tail Radish #3870
FD551402       --> TGTTACTCCTTGCACCTGGTTCCATGTCACCTGTAATCAAGACAACCGCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD560701       --> TGTTACTCCGTGCACCTGGTTCCATGTCACCTGTAATCAAGACAACCGCG  Raphanus sativus var. oleiformis
FD557648       --> TGTTACTCCTTGCACCTGGTTCCATGTCACCTGTAATCAAGACAACCGCG  Raphanus raphanistrum subsp. landra
EX886887       --> TGT-ACTCCGTGCACCTGGTTCCATGTCACCTGTAATCAAGACAGCCGCG  Raphanus sativus var. oleiformis
EY915442       --> TGTTACTCCTTGCACCTGGTTCCATGTCACCTGTAATCAAGACAACCGCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556035       --> TGTTACTCCTTGCACCTGGTTCCATGTCACCTGTAATCAAGACAACCGCG  Raphanus raphanistrum subsp. landra
EV550739       --> TGTTACTCCTTGCACCTGGTTCCATGTCACCTGTAATCAAGACAACCGCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV535028       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               401    -    451
UN22718        --> TCACTCGTGTGGATTTGGGTAATTCAAACCTTTCTGGACATCTTGCCCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911289       <-- TCACTCGTGTGGATTTGGGTAATTCAAACCTTTCTGGACATCTTGCCCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV530441       <-- TCACTCGTGTGGATTTAGGTAATTCAAACCTTTCTGGACATCTTGCCCCT  Raphanus raphanistrum subsp. maritimus
FD937385       <-- TCACTCGTGTGGATTTGGGTAATTCAAACCTTTCTGGACATCTTGCCCCT  Raphanus sativus var. oleiformis
FD552403       <-- TCACTCGTGTGGATTTGGGTAATTCAAACCTTTCTGGACATCTTGCCCCT  Raphanus raphanistrum subsp. landra
FD565059       <-- TCACTCGTGTGGATTTGGGTAATTCAAACCTTTCTGGACATCTTGCCCCT  Raphanus sativus var. oleiformis
FD547302       <-- TCACTCGTGTGGATTTGGGTAATTCAAACCTTTCTGGACATCTTGCCCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553712       <-- TCACTCGTGTGGATTTGGGTAATTCAAACCTTTCTGGACATCTTGCCCCT  Raphanus raphanistrum subsp. landra
EY894396       <-- TCACTCGTGTGGATTTAGGTAATTCAAACCTTTCTGGACATCTTGCCCCT  Raphanus raphanistrum subsp. maritimus
EV539799       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545364       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537735       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536851       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX891170       <-- ..................................................  Raphanus sativus var. oleiformis
EY895568       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY899887       --> TCACTCGTGTGGATTTAGGTAATTCAAACCTTTCTGGACATCTTGCCCCT  Raphanus raphanistrum subsp. maritimus
EV525794       --> TCACTCGTGTGGATTTAGGTAATTCAAACCTTTCTGGACATCTTGCCCCT  Raphanus raphanistrum subsp. maritimus
EY898303       --> TCACTCGTGTGGATTTAGGTAATTCAAACCTTTCTGGACATCTTGCCCCT  Raphanus raphanistrum subsp. maritimus
EY949816       --> TCACTCGTGTGGATTTGGGTAATTCAAACCTTTCTGGACATCTTGCCCCT  Raphanus sativus cv Rat-Tail Radish #3870
FD551402       --> TCACTCGTGTGGATTTGGGTAATTCAAACCTTTCTGGACATCTTGCCCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD560701       --> TCACTCGTGTGGATTTGGGTAATTCAAACCTTTCTGGACATCTTGCCCCT  Raphanus sativus var. oleiformis
FD557648       --> TCACTCGTGTGGATTTGGGTAATTCAAACCTTTCTGGACATCTTGCCCCT  Raphanus raphanistrum subsp. landra
EX886887       --> CCACTCGTGTGGATTTGGGTAATTCAAACCTTTCTGGACATCTTGCCCCT  Raphanus sativus var. oleiformis
EY915442       --> TCACTCGTGTGGATTTGGGTAATTCAAACCTTTCTGGACATCTTGCCCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556035       --> TCACTCGTGTGGATTTGGGTAATTCAAACCTTTCTGGACATCTTGCCCCT  Raphanus raphanistrum subsp. landra
EV550739       --> TCACTCGTGTGGATTTGGGTAATTCAAACCTTTCTGGACATCTTGCCCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV535028       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               451    -    501
UN22718        --> GAGCTTGGGAAGCTCGAACATTTACAGTATCTGGAGCTCTACAAAAACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911289       <-- GAGCTTGGGAAGCTCGAACATTTACAGTATCTGGAGCTCTACAAAAACAA
EV530441       <-- GAGCTTGGGAAGCTCGAACATTTACAGTATCTGGAGCTCTACAAAAACAA
FD937385       <-- GAGCTTGGGAAGCTCGAACATTTACAGTATCTGGAGCTCTACAAAAACAA
FD552403       <-- GAGCTTGGGAAGCTCGAACATTTACAGTATCTGGAGCTCTACAAAAACAA
FD565059       <-- GAGCTTGGGAAGCTCGAACATTTACAGTATCTGGAGCTCTACAAAAACAA
FD547302       <-- GGGCTTGGGAAGCTCGAACATTTACAGTATCTGGAGCTCTACAAAAACAA
FD553712       <-- GAGCTTGGGAAGCTCGAACATTTACAGTATCTGGAGCTCTACAAAAACAA
EY894396       <-- GAGCTTGGGAAGCTCGAACATTTACAGTATCTGGAGCTCTACAAAAACAA
EV539799       <-- .................................................g
FD545364       <-- ..................................................
FD537735       <-- ..................................................
FD536851       <-- ..................................................
EX891170       <-- ..................................................
EY895568       <-- ..................................................
EY899887       --> GAGCTTGGGAAGCTCGAACATTTACAGTATCTGGAGCTCTACAAAAACAA
EV525794       --> GAGCTTGGGAAGCTCGAACATTTACAGTATCTGGAGCTCTACAAAAACAA
EY898303       --> GAGCTTGGGAAGCTCGAACATTTACAGTATCTGGAGCTCTACAAAAACAA
EY949816       --> GAGCTTGGGAAGCTCGAACATTTACAGTATCTGGAGCTCTACAAAAACAA
FD551402       --> GGGCTTGGGAAGCTCGAACATTTACAGTATCTGGAGCTCTACAAAAACAA
FD560701       --> GAGCTTGGGAAGCTCGAACATTTACAGTATCTGGAGCTCTACAAAAACAA
FD557648       --> GAGCTTGGGAAGCTCGAACATTTACAGTATCTGGAGCTCTACAAAAACAA
EX886887       --> GAGCTTGGGAAGCTCGAACATTTACAGTATCTGGAGCTCTACAAAAACAA
EY915442       --> GAGCTTGGGAAGCTCGAACATTTACAGTATCTGGAGCTCTACAAAAACAA
FD556035       --> GAGCTTGGGAAGCTCGAACATTTACAGTATCTGGAGCTCTACAAAAACAA
EV550739       --> GAGCTTGGGAAGCTCGAACATTTACAGTATCTGGAGCTCTACAAAAACAA
EV535028       --> .................................................g

               501    -    551
UN22718        --> CATCCAAGGAACTATACCTTCTGAACTTGGAAAATTGAAAAGTCTCATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911289       <-- CATCCAAGGAACTATACCTTCTGAACTTGGAAAATTGAAAAGTCTCATCA
EV530441       <-- CATCCAAGGAACTATACCTTCTGAACTTGGAAAATTGAAAAGTCTCATCA
FD937385       <-- CATCCAAGGAACTATACCTTCTGAACTTGGAAAATTGAAAAGTCTCATCA
FD552403       <-- CATCCAAGGAACTATACCTTCTGAACTTGGAAAATTGAAAAGTCTCATCA
FD565059       <-- CATCCAAGGAACTATACCTTCTGAACTTGGAAAATTGAAAAGTCTCATCA
FD547302       <-- CATCCAAGGAACTATACCTTTTGAACTTGGAAAATTGAAAAGTTTCATCA
FD553712       <-- CATCCAAGGAACTATACCTTCTGAACTTGGAAAATTGAAAAGTCTCATCA
EY894396       <-- CATCCAAGGAACTATACCTTCTGAACTTGGAAAATTGAAAAGTCTCATCA
EV539799       <-- CATCCAAGGAACTATACCATCTGAACTTGGAAAATTGAAAAGTCTCATCA
FD545364       <-- ......................GAACTTGGAAAATTGAAAAGTCTCATCA
FD537735       <-- ...............................................TCA
FD536851       <-- .................................................A
EX891170       <-- ..................................................
EY895568       <-- ..................................................
EY899887       --> CATCCAAGGAACTATACCTTCTGAACTTGGAAAATTGAAAAGTCTCATCA
EV525794       --> CATCCAAGGAACTATACCTTCTGAACTTGGAAAATTGAAAAGTCTCATCA
EY898303       --> CATCCAAGGAACTATACCTTCTGAACTTGGAAAATTGAAAAGTCTCATCA
EY949816       --> CATCCAAGGAACTATACCTTCTGAACTTGGAAAATTGAAAAGTCTCATCA
FD551402       --> CATCCAAGGAACTATACCTTCTGAACTTGGAAAATTGAAAAGTCTCATCA
FD560701       --> CATCCAAGGAACTATACCTTCTGAACTTGGAAAATTGAAAAGTCTCATCA
FD557648       --> CATCCAAGGAACTATACCTTCTGAACTTGGAAAATTGAAAAGTCTCATCA
EX886887       --> CATCCAAGGAACTATACCTTCTGAACTTGGAAAATTGAAAAGTCTCATCA
EY915442       --> CATCCAAGGAACTATACCTTCTGAACTTGGAAAATTGAAAAGTCTCATCA
FD556035       --> CATCCAAGGAACTATACCTTCTGAACTTGGAAAATTGAAAAGTCTCATCA
EV550739       --> CATCCAAGGAACTATACCTTCTGAACTTGGAAAATTGAAAAGTCTCATCA
EV535028       --> CATCCAAGGAACTATACCATCTGAACTTGGAAAATTGAAAAGTCTCATCA

               551    -    601
UN22718        --> GCTTGGATCTTTACAACAACAATCTTACCGGGAAGATCCC-TACTTCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911289       <-- GCTTGGATCTTTACAACAACAATCTTACCGGGAAGATCCC-TACTTCCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV530441       <-- GCTTGGATCTTTACAACAACAATCTTACCGGGAAGATCCC-TACTTCCTT  Raphanus raphanistrum subsp. maritimus
FD937385       <-- GCTTGGATCTTTACAACAACAATCTTACCGGGAAGATCCC-TACTTCCTT  Raphanus sativus var. oleiformis
FD552403       <-- GCTTGGATCTTTACAACAACAATCTTACCGGGAAGATCCC-TACTTCCTT  Raphanus raphanistrum subsp. landra
FD565059       <-- GCTTGGATCTTTACAACAACAATCTTACCGGGAAGATCCC-TACTTCCTT  Raphanus sativus var. oleiformis
FD547302       <-- GCTTGGATCTTTACAACAACAATTTTACCGGGAAGATCCC-TACTTCCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553712       <-- GCTTGGATCTTTACAACAACAATCTTACCGGGAAGATCCC-TACTTCCTT  Raphanus raphanistrum subsp. landra
EY894396       <-- GCTTGGATCTTTACAACAACAATCTTACCGGGAAGATCCC-TACTTCCTT  Raphanus raphanistrum subsp. maritimus
EV539799       <-- GCTTGGATCTTTACAACAACAATCTTACCGGGAAGATCCC-TACTTCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545364       <-- GCTTGGATCTTTACAACAACAATCTTACCGGGAAGATCCC-TACTTCCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537735       <-- GCTTGGATCTTTACAACAACAATCTTACCGGGAAGATCCC-TACTTCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536851       <-- GCTTGGATCTTTACAACAACAATCTTACCGGGAAGATCCC-TACTTCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX891170       <-- ..TTGGATCTTTACAACAACAATCTTACCGGGAAGATCCC-TACTTCCTT  Raphanus sativus var. oleiformis
EY895568       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY899887       --> GCTTGGATCTTTACAACAACAATCTTACCGGGAAGATCCCCTACTTCCTT  Raphanus raphanistrum subsp. maritimus
EV525794       --> GCTTGGATCTTTACAACAACAATCTTACCGGGAAGATCCC-TACTTCCTT  Raphanus raphanistrum subsp. maritimus
EY898303       --> GCTTGGATCTTTACAACAACAATCTTACCGGGAAGATCCC-TACTTCCTT  Raphanus raphanistrum subsp. maritimus
EY949816       --> GCTTGGATCTTTACAACAACAATCTTACCGGGAAGATCTC-TACTTCCTT  Raphanus sativus cv Rat-Tail Radish #3870
FD551402       --> GCTTGGATCTTTACAACAACAATCTTACCGGGAAGATCCC-TACTTCCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD560701       --> GCTTGGATCTTTACAACAACAATCTTACCGGGAAGATCCC-TACTTCCTT  Raphanus sativus var. oleiformis
FD557648       --> GCTTGGATCTTTACAACAACAATCTTACCGGGAAGATCCC-TACTTCCTT  Raphanus raphanistrum subsp. landra
EX886887       --> GCTTGGATCTTTACAACAACAATCTTACCGGGAAGATCCC-TACTTCCTT  Raphanus sativus var. oleiformis
EY915442       --> GCTTGGATCTTTACAACAACAATCTTACCGGGAAGATCCC-TACTTCCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556035       --> GCTTGGATCTTTACAACAACAATCTTACCGGGAAGATCCC-TACTTCCTT  Raphanus raphanistrum subsp. landra
EV550739       --> GCTTGGATCTTTACAACAACAATCTTACCGGGAAGATCCC-TACTTCCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV535028       --> GCTTGGATCTTTACAACAACAATCTTACCGGGAAGATCCC-TACTTCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)

               601    -    651
UN22718        --> GGGGAAATTGAAGTCTCTGGTCTTTCTCCGGCTCAATGACAACCGATTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911289       <-- GGGGAAATTGAAGTCTCTGGTCTTTCTCCGGCTCAATGACAACCGATTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV530441       <-- GGGGAAATTGAAGTCTCTGGTCTTTCTCCGGCTCAATGACAACCGATTGA  Raphanus raphanistrum subsp. maritimus
FD937385       <-- AGGGAAATTGAAGTCTCTGGTCTTTCTCCGGCTCAATGACAACCGATTGA  Raphanus sativus var. oleiformis
FD552403       <-- GGGGAAATTGAAGTCTCTGGTCTTTCTCCGGCCCAATGACAACCGATTGA  Raphanus raphanistrum subsp. landra
FD565059       <-- AGGGAAATTGAAGTCTTTGGTCTTTTTCCGGCTCAATGACAACCGATTGA  Raphanus sativus var. oleiformis
FD547302       <-- AGGGAAATTGAAGTTTTTGGTCTTTTTCCGGCTCAATGACAACCGATTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553712       <-- GGGGAAATTGAAGTCTCTGGTCTTTCTCCGGCTCAATGACAACCGATTGA  Raphanus raphanistrum subsp. landra
EY894396       <-- GGGGAAATTGAAGTCTCTGGTCTTTCTCCGGCTCAATGACAACCGATTGA  Raphanus raphanistrum subsp. maritimus
EV539799       <-- GGGGAAATTGAAGTCTCTGGTCTTTTTCCGGCTCAATGACAACCGATTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545364       <-- GGGGAAATTGAAGTCTCTGGTCTTTCTCCGGCTAAATGACAACCGATTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537735       <-- GGGGAAATTGAAGTCTCTGGTCTTTCTCCGGCTCAATGACAACCGATTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536851       <-- GGGGAAATTGAAGTTTTTGGTCTTTTTCCGGCTCAATGACAACCGATTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX891170       <-- AGGGAAATTGAAGTCTCTGGTCTTTCTCCGGCTCAATGACAACCGATTGA  Raphanus sativus var. oleiformis
EY895568       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY899887       --> GGGGAAATTGAAGTCTCTGGTCTTTCTCCGGCTCAATGACAACCGATTGA  Raphanus raphanistrum subsp. maritimus
EV525794       --> GGGGAAATTGAAGTCTCTGGTCTTTCTCCGGCTCAATGACAACCGATTGA  Raphanus raphanistrum subsp. maritimus
EY898303       --> GGGGAAATTGAAGTCTCTGGTCTTTCTCCG-CTCAATGACAACCGATTGA  Raphanus raphanistrum subsp. maritimus
EY949816       --> AGGGAAATTGAAGTCTCTGGTCTTTCTCCGGCTCAATGACAACCGATTGA  Raphanus sativus cv Rat-Tail Radish #3870
FD551402       --> AGGGAAATTGAAGTCTCTGGTCTTTCTCCGGCTCAATGACAACCGATTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD560701       --> AGGGAAATTGAAGTCTCTGGTCTTTCTCCGGCTCAATGACAACCGATTGA  Raphanus sativus var. oleiformis
FD557648       --> GGGGAAATTGAAGTCTCTGGTCTTTCTCCGGCTCAATGACAACCGATTGA  Raphanus raphanistrum subsp. landra
EX886887       --> AGGGAAATTGAAGTCTCTGGTCTTTCTCCGGCTCAATGACAACCGATTGA  Raphanus sativus var. oleiformis
EY915442       --> GGGGAAATTGAAGTCTCTGGTCTTTCTCCGGCTCAATGACAACCGATTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556035       --> GGGGAAATTGAAGTCTCTGGTCTTTCTCCGGCCCAATGACAACCGATTGA  Raphanus raphanistrum subsp. landra
EV550739       --> GGGGAAATTGAAGTCTCTGGTCTTTCTCCGGCTCAATGACAACCGATTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV535028       --> GGGGAAATTGAAGTCTCTGGTCTTTCTCCGGCTCAATGACAACCGATTGA  Raphanus raphanistrum subsp. raphanistrum (MS)

               651    -    701
UN22718        --> CCGGTTCAATCCCTAGAGAACTGACGAAAATCCCAAGCCTTAAAGTCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911289       <-- CCGGTTCAATCCCTAGAGAACTGACGAAAATCCCAAGCCTTAAAGTCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV530441       <-- CCGGTTCAATCCCTAGAGAACTGACGAAAATCCCAAGCCTTAAAGTCTTT  Raphanus raphanistrum subsp. maritimus
FD937385       <-- CCGGTTCAATCCCTAGAGAACTAACGAAAATCCCAAGCCTTAAAGTCTTT  Raphanus sativus var. oleiformis
FD552403       <-- CCGGTTCAATCCCTAGAGAACTGACGAAAATCCCAAGCCTTAAAGTCTTT  Raphanus raphanistrum subsp. landra
FD565059       <-- CCGGTTCAATCCCTAGAGAACTAACGAAAATCCCAAGCCTTAAAGTTTTT  Raphanus sativus var. oleiformis
FD547302       <-- CCGGTTCAATCCCTAGAGAACTGACGAAAATCCCAAGCCTTAAAGTTTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553712       <-- CCGGTTCAATCCCTAGAGAACTGACGAAAATCCCAAGCCTTAAAGTCTTT  Raphanus raphanistrum subsp. landra
EY894396       <-- CCGGTTCAATCCCTAGAGAACTGACGAAAATCCCAAGCCTTAAAGTCTTT  Raphanus raphanistrum subsp. maritimus
EV539799       <-- CCGGTTCAATCCCTAGAGAACTAACGAAAATCCCAAGCCTTAAAGTCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545364       <-- CTGGTTCAATCCCTAGAGAACTGACGAAAATCCCAAGCCTTAAAGTCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537735       <-- CCGGTTCAATCCCTAGAGAACTAACGAAAATCCCAAGCCTTAAAGTCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536851       <-- CCGGTTCAATCCCTAGAGAACTAACGAAAATCCCAAGCCTTAAAGTTTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX891170       <-- CCGGTTCAATCCCTAGAGAACTAACGAAAATCCCAAGCCTTAAAGTCTTT  Raphanus sativus var. oleiformis
EY895568       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY899887       --> CCGGTTCAATCCCTAGAGAACTGACGAAAATCCCAAGCCTTAAAGTCTTT  Raphanus raphanistrum subsp. maritimus
EV525794       --> CCGGTTCAATCCCTAGAGAACTGACGAAA-TCCCAAGCCTTAAAGTCTTT  Raphanus raphanistrum subsp. maritimus
EY898303       --> CCGGTTCAATCCCTAGAGAACTGACGAAAATCCCAAGCCTTAA-GTCTTT  Raphanus raphanistrum subsp. maritimus
EY949816       --> CCGGTTCAATCCCTAGAGAACTAACGAAAATCCCAAGCCTTAAAGTCTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD551402       --> CCGGTTCAATCCCTAGAGAACTGACGAAAATCCCAAGCCTTAAAGTCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD560701       --> CCGGTTCAATCCCTAGAGAACTAACGAAAATCCCAAGCCTTAAAGTCTTT  Raphanus sativus var. oleiformis
FD557648       --> CCGGTTCAATCCCTAGAGAACTGACGAAAATCCCAAGCCTTAAAGTCTTT  Raphanus raphanistrum subsp. landra
EX886887       --> CCGGTTCAATCCCTAGAGAACTAACGAAAATCCCAAGCCTTAAAGTCTTT  Raphanus sativus var. oleiformis
EY915442       --> CCGGTTCAATCCCTAGAGAACTGACGAAAATCCCAAGCCTTAAAGTCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556035       --> CCGGTTCAATCCCTAGAGAACTGACGAAAATCCCAAGCCTTAAAGTCTTT  Raphanus raphanistrum subsp. landra
EV550739       --> CCGGTTCAATCCCTAGAGAACTGACGAAAATCCCAAGCCTTAAAGTCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV535028       --> CCGGTTCAATCCCTAGAGAACTAACGAAAATCCCAAGCCTTAAAGTCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)

               701    -    751
UN22718        --> GATGTGTCGAACAATAATTTGTGTGGAACTATCCCAATAGAAGGACCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911289       <-- GATGTGTCGAACAATAATTTGTGTGGAACTATCCCAATAGAAGGACCTTT
EV530441       <-- GATGTGTCGAACAATAATTTGTGTGGAACTATCCCAATAGAAGGACCTTT
FD937385       <-- GATGTGTCGAACAATAATTTTTGTGGAACTATCCCAATAGAAGGACCTTT
FD552403       <-- GATGTGTCGAACAACAATTTGTGTGGAACTATCCCAATAGAAGGACCTTT
FD565059       <-- GATGTGTCGAACAATAATTTGTGTGGAACTATCCCAATAGAAGGACCTTT
FD547302       <-- GATGTGTCGAACAATAATTTGTGTGGAACTATCCCAATAGAAGGACCTTT
FD553712       <-- GATGTGTCGAGCAATAATTTGTGTGGAACTATCCCAATAGAAGGACCTTT
EY894396       <-- GATGTGTCGAACAATAATTTGTGTGGAACTATCCCAATAGAAGGACCTTT
EV539799       <-- GATGTGTCGAACAATAATTTGTGTGGAACTATCCCAATAGAAGGACCTTT
FD545364       <-- GATGTGTCGAACAATAATTTGTGTGGAACTATCCCAATAGAAGGACCTTT
FD537735       <-- GATGTGTCGAACAATAATTTGTGTGGAACTATCCCAATAGAAGGACCTTT
FD536851       <-- GATGTGTCGAACAATAATTTGTGTGGAACTATCCCAATAGAAGGCCCTTT
EX891170       <-- GATGTGTCGAACAATAATTTGTGTGGAACTATCCCAATAGAAGGACCTTT
EY895568       <-- ..................................................
EY899887       --> GATGTGTCGAACAATAATTTGTGTGGAACTATCCCAATAGAAG-ACCTTT
EV525794       --> GATGTGTCGAACAATAATTTGTGTGGAACTATCCCAATAGAAGGACCTTT
EY898303       --> GATGTGTC..........................................
EY949816       --> GATGTGTCGAACAATAATTTGTGTGGAACTATCCCAATAGAAG-A-CTTT
FD551402       --> GATGTGTCGAACAATAATTTGTGTGGAACTATCCCAATAGAAG-A-CTTT
FD560701       --> GATGTGTCGAACAATAATTTGTGTGGAACTATCCCAATAGAAG-ACCTTT
FD557648       --> GATGTGTCGAGCAATAATTTGTGTGGAACTATCCCAATA...........
EX886887       --> GATGTGTCGAACAATAATTTGTGTGGAACTATCCCAATAGAAAGACCTTT
EY915442       --> GATGTGTCGAACAATAATTTGTGTGGAACTATCCCAATAGAAGGACCTTT
FD556035       --> GATGTGTCGAACAACAATTTGTGTGGAACTATCCCAATAGAAGGACCT..
EV550739       --> GATGTGTCGAACAATAATTTGTGTGGAACTATCCCAATAGAAGGACCTTT
EV535028       --> GATGTGTCGAACAATAATTTGTGTGGAACTATCCCAATAGAAGGACCTTT

               751    -    801
UN22718        --> TGAACACATTCCTTTGGAGAACTTTGAGAACAACTCGCGATTGGAGGGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911289       <-- TGAACACATTCCTTTGGAGAACTTTGAGAACAACTCGCGATTGGAGGGAC
EV530441       <-- TGAACACATTCCTTTGGAGAACTTTGAGAACAACTCGCGATTGGAGGGAC
FD937385       <-- TGAACACATTCCTTTGGAGAACTTTGAGAACAACTCGCGATTGGAGGGAC
FD552403       <-- TGAACACATTCCTTTGGAGAACTTTGAGAACAACTCGCGATTGGAGGGAC
FD565059       <-- TGAACACATTCCTTTGGAGAACTTTGAGAACAACTCGCGATTGGAGGGAC
FD547302       <-- TGAACACATTCCTTTGGAGAACTTTGAGAACAACTCGCGATTGGAGGGAC
FD553712       <-- TTAACACATTCCTTTGGAGAACTTTGAGAACAACTCGCGATTGGAGGGAC
EY894396       <-- TGAACACATTCCTTTGGAGAACTTTGAGAACAACTCGCGATTGGAGGGAC
EV539799       <-- TGAACACATCCCTTTGGAGAACTTTGAGAACAACTCGCGATTGGAGGGAC
FD545364       <-- TGAACACATTCCTTTGGAGAACTTTGAGAACAACTCGCGATTGGAGGGAC
FD537735       <-- TGAACACATTCCTTTGGAGAACTTTGAGAACAACTCGCGATTGGAGGGAC
FD536851       <-- TGAACACATTCCTTTGGAGAACTTTGAGAACAACTCGCGATTGGAGGGAC
EX891170       <-- TGAACACATTCCTTTGGAGAACTTTGAGAACAACTCGCGATTGGAGGGAC
EY895568       <-- ..................................................
EY899887       --> TGAACACAT.........................................
EV525794       --> TGAACACATTCCTTTGGAGAACTTTGAGAACAACTCGCGATTGGAGGGAC
EY898303       --> ..................................................
EY949816       --> TGAACACATTCCTTTGGAGA-CTTTGAGA-C-ACTCGCGATTGGAGGGAC
FD551402       --> TG-ACACATTCCTTTGGAGAACTTTGAGA-C-ACTCGCGATT........
FD560701       --> TGAACACATTCCTTTGGAGAACTTTGAG......................
FD557648       --> ..................................................
EX886887       --> TGAACACATTCCTTTGGAGAACTTTGAGA-CAACTCGCGATTGGAGG-AC
EY915442       --> TGAACACATTCCTTTGGAGAACTTTGAGAACAACTCGCGATTGGAGGGAC
FD556035       --> ..................................................
EV550739       --> TGAACACATTCCTTTGGAGAACTTTGAGAACAACTCGCGATTGGAGGGAC
EV535028       --> TGAACACATCCCTTTGGAGAACTTTGAGAACAACTCGCGATTGGAGGGAC

               801    -    851
UN22718        --> CGGAACTACTCGGTCTTGCAAGCTACGACACCAACTGCAACTGAAACAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911289       <-- CGGAACTACTCGGTCTTGCAAGCTACGACACCAACTGCAACTGAAACAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV530441       <-- CGGAACTACTCGGTCTTGCAAGCTACGACACCAACTGCAACTGAAACAAC  Raphanus raphanistrum subsp. maritimus
FD937385       <-- CGGAACTACTCGGTCTTGCAAGCTACGACACCAACTGCAACTGAGACAAC  Raphanus sativus var. oleiformis
FD552403       <-- CGGAACTACTCGGTCTTGCAAGCTACGACACCAACTGCAACTGAAACAAC  Raphanus raphanistrum subsp. landra
FD565059       <-- CGGAACTACTCGGTCTTGCAAGCTACGACACCAACTGCAACTGAGACAAC  Raphanus sativus var. oleiformis
FD547302       <-- CGGAACTACTCGGTCTTGCAAGCTACGACACCAACTGCAACTGAAACAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553712       <-- CGGAACTACTCGGTCTTGCAAGCTACGACACCAACTGCAACTGAAACAAC  Raphanus raphanistrum subsp. landra
EY894396       <-- CGGAACTACTCGGTCTTGCAAGCTACGACACCAACTGCAACTGAAACAAC  Raphanus raphanistrum subsp. maritimus
EV539799       <-- CGGAACTACTCGGTCTTGCAAGCTACGACACCAACTGCAACTGAAACAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545364       <-- CGGAACTACTCGGTCTTGCAAGCTACGACACCAACTGCAACTGAGACAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537735       <-- CGGAACTACTCGGTCTCGCAAGCTACGACACCAACTGCAACTGAAACAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536851       <-- CGGAACTACTCGGTCTTGCAAGCTACGACACCAACTGCAACTGAAACAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX891170       <-- CGGAACTACTCGGTCTTGCAAGCTACGACACCAACTGCAACTGAGACAAC  Raphanus sativus var. oleiformis
EY895568       <-- ...............TTGCAAGTTACGACACCAACTGCAACTGAAACAAC  Raphanus raphanistrum subsp. maritimus
EY899887       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV525794       --> CGGAACTACTCGGTCTTGCAAGCTACGACACCAACTGCAACTGAAACAAC  Raphanus raphanistrum subsp. maritimus
EY898303       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY949816       --> CGGAACTA..........................................  Raphanus sativus cv Rat-Tail Radish #3870
FD551402       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD560701       --> ..................................................  Raphanus sativus var. oleiformis
FD557648       --> ..................................................  Raphanus raphanistrum subsp. landra
EX886887       --> CGGAACTACT........................................  Raphanus sativus var. oleiformis
EY915442       --> CGGAACTACTCGGTCTTGCAAGCTACGACACCAACTGCAACTGAAACAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556035       --> ..................................................  Raphanus raphanistrum subsp. landra
EV550739       --> CGGAACTACTCGGTCTTGCAAGCTACGACACCAACTGCAACTGAAACAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV535028       --> CGGAACTACTCGGTCTTGCAAGCTACGACACCAACTGCAACTGAAACAAC  Raphanus raphanistrum subsp. raphanistrum (MS)

               851    -    901
UN22718        --> TTTTTAAAAAA-TTGGGGATGGATCTTGTAAGAACACTTCACCACTTTT-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911289       <-- TTTTTAAAAAA-TTGGGGATGGATCTTGTAAGAACACTTCACCACTTTT-  Raphanus raphanistrum subsp. raphanistrum (NY)
EV530441       <-- TTTTTAAAAAA-TTGGGGATGGATCTTGTAAGAACACTTCACCACTTTT-  Raphanus raphanistrum subsp. maritimus
FD937385       <-- TTTTTAAAAAA-TTGGGGGTGGATCTTGTAAGAACACTTCACCACTTTTT  Raphanus sativus var. oleiformis
FD552403       <-- TTTTTAAAAAA-TTGGGGATGGATCTTGTAAGAACACTTCACCACTTTT-  Raphanus raphanistrum subsp. landra
FD565059       <-- TTTTTAAAAAA-TTGGGGGTGGATCTTGTAAGAACACTTCACCACTTTTT  Raphanus sativus var. oleiformis
FD547302       <-- TTTTTAAAAAA-TTGGGGATGGATCTTGTAAGAACACTTCACCACTTTT-  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553712       <-- TTTTTAAAAAA-TTGGGGATGGATCTTGTAAGAACACTTCACCACTTTT-  Raphanus raphanistrum subsp. landra
EY894396       <-- TTTTTAAAAAA-TTGGGGATGGATCTTGTAAGAACACTTCACCACTTTT-  Raphanus raphanistrum subsp. maritimus
EV539799       <-- TTTTTAAAAAA-TTGGGGGTGGATCTTGTAAGAACACTTCACCACTTTT-  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545364       <-- TTTTTAAAAAA-TTGGGGGTGGATCTTGTAAGAACACTTCGCCACTTTT-  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537735       <-- TTTTTAAAAAAATTGGGGGTGGATCTTGTAAGAACACTTCACCACTTTT-  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536851       <-- TTTTTAAAAAA-TTGGGGGTGGATTTTGTAAGAACACTTCACCACTTTT-  Raphanus raphanistrum subsp. raphanistrum (MS)
EX891170       <-- TTTTTAAAAAA-TTGGGGGTGGATCTTGTAAGAACACTTCACCACTTTTT  Raphanus sativus var. oleiformis
EY895568       <-- TTTTTAAAAAA-TTGGGGATGGATCTTGTAAGAACACTTCACCATTTTT-  Raphanus raphanistrum subsp. maritimus
EY899887       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV525794       --> TTTTT.............................................  Raphanus raphanistrum subsp. maritimus
EY898303       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY949816       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD551402       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD560701       --> ..................................................  Raphanus sativus var. oleiformis
FD557648       --> ..................................................  Raphanus raphanistrum subsp. landra
EX886887       --> ..................................................  Raphanus sativus var. oleiformis
EY915442       --> TTTTTAAAAA--TTGGGGATGGATCTTGTA-GAACACTTCACCACTTTT-  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556035       --> ..................................................  Raphanus raphanistrum subsp. landra
EV550739       --> TTTTTAAAAA--TTGGGGATGGATCTTGTAAGAACACTTCACCACTTTT-  Raphanus raphanistrum subsp. raphanistrum (NY)
EV535028       --> TTTTTAAAAAA-TTGGGGGTGGATCTTGTAAGAACACTTCACCACTTTT-  Raphanus raphanistrum subsp. raphanistrum (MS)

               901    -    951
UN22718        --> ATCAAATATCACATCTATTATTATGTAATAAGTATATATGTATGTCGGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911289       <-- ATCAAATATCACATCTATTATTATGTAATAAGTATATATGTATGTCGGTA
EV530441       <-- ATCAAATATCACATCTATTATTATGTAATAAGTATATATGTATGTCGGTA
FD937385       <-- ATCAAATATCACATCTTTTATTTTGTAATAAGTATATA--TATGTCAGTA
FD552403       <-- ATCAAATATCACATCTATTATTATGTAATAAGTATATATGTATGTCGGTA
FD565059       <-- ATCAAATATCACATCTTTTATTTTGTAATAAGTATATA--TATGTCAGTA
FD547302       <-- ATCAAATATCACATCTATTATTATGTAATAAGTATATATGTATGTCGGTA
FD553712       <-- ATCAAATATCACATCTATTATTATGTAATAAGTATATACGTATGTCGGTA
EY894396       <-- ATCAAATATCACATCTATTATTATGTAATAAGTATATATGTATGTCGGTA
EV539799       <-- ATCAAATATCACATCTATTATTATGTAATAAGTATATATGTATGTCGGTA
FD545364       <-- ATCAAATATCACATCTATTATTATGTAATAAGTATATATGTATGTCGGTA
FD537735       <-- ATCAAATATCACATCTATTATTATGTAATAAGTATATATGTATGTCGGTA
FD536851       <-- ATCAAATATCACATTTATTATTATGTAATAAGTATATATGTATGTCGGTA
EX891170       <-- ATCAAATATCACATCTTTTATTTTGTAATAAGTATATA--TATGTCAGTA
EY895568       <-- ATCAAATATCACATTTATTATTATGTAATAAGTATATATGTATGTCGGTA
EY899887       --> ..................................................
EV525794       --> ..................................................
EY898303       --> ..................................................
EY949816       --> ..................................................
FD551402       --> ..................................................
FD560701       --> ..................................................
FD557648       --> ..................................................
EX886887       --> ..................................................
EY915442       --> ATCAA-TATCACATCTATTATTATGT........................
FD556035       --> ..................................................
EV550739       --> ATCAAATATCACATCTATTATTATGTAATAAGTATATATGTATGTCGGTA
EV535028       --> ATCAAATATCACATCTATTATTATGTAATAAGTATATATGTATGTCGGTA

               951    -   1001
UN22718        --> GTTGGAAAAACAAAGAACAAAAAAA-GAGCCCAAAGACTACTGGTGTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911289       <-- GTTGGAAAAACAAAGAACAAAAAAA-GAGCCCAAAGACTACTGGTGTCTG
EV530441       <-- GTTGGAAAAACAAAGAACAAAAAAA-GAGCCCAAAGACTACTGGTGTCTG
FD937385       <-- GTTG-AAAAACAAAGAAAAAAgagccg.......................
FD552403       <-- GTTGGAAAAACAAAGAACAAAAAAA-GAGCCCAAAGACTACTGGTGTCTG
FD565059       <-- GTTG..............................................
FD547302       <-- GTTGG.............................................
FD553712       <-- GTTGGAAAAACAAAGAACAAAAAAA-GAGCCCAAAGACTACTGGTGTCTG
EY894396       <-- GTTGGAAAAACAAAGAACAAAAAAA-GAGCCCAAAGACTACTGGTGTCTG
EV539799       <-- GTTGGAAA..........................................
FD545364       <-- GTTGGAAAAACAAAGAACAAAAAAA-GAGCCCAAAGACTACTGGTGTCTG
FD537735       <-- GTTGGAAAAACAAAGAACAAAAAAG-GAGCCC..................
FD536851       <-- GTTGGAAAAACAAAGAACAAAAAAG-GAGCCCAAAGACTACTGGTGTTTG
EX891170       <-- GTTG-AAAAACAAAGAAAAAA.............................
EY895568       <-- GTTGGAAAAACAAAGAACAAAAAAA-GAGCCCAAAGACTACTGGTGTCTG
EY899887       --> ..................................................
EV525794       --> ..................................................
EY898303       --> ..................................................
EY949816       --> ..................................................
FD551402       --> ..................................................
FD560701       --> ..................................................
FD557648       --> ..................................................
EX886887       --> ..................................................
EY915442       --> ..................................................
FD556035       --> ..................................................
EV550739       --> GTTGGAAAAACAAAGAACAAAAAAAAGAGCCCAAAGACTACTGGTGTCTG
EV535028       --> GTTGGAAAAACAAAGAACAAAAAAA-GAGCCCAAAGACTACTGGTGTCTG

               1001   -   1051
UN22718        --> TTT-AAGTAATAACATATACATGCGTTTTGTGTGTGTAGTGGCACTGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911289       <-- TTT-AAGTAATAACATATACATGCGTTTTGTGTGTGTAGTGGCACTGAGA
EV530441       <-- TTT-AAGTAATAACATATACATGCGTTTTGTGTGTGT.............
FD937385       <-- ..................................................
FD552403       <-- TTT-AAGTAATAACATATACATGCGTTTTGTGTGTGT.............
FD565059       <-- ..................................................
FD547302       <-- ..................................................
FD553712       <-- TTT-AAGTAATAACATATACATGCGTTTTGTGTGTGTAGTGGCACTGAGG
EY894396       <-- TTT-AAGTAATAACATATACATGCGTTTTGTGTGTGTAGTGGCACTG...
EV539799       <-- ..................................................
FD545364       <-- TTT-AAGTAAAAACATATACATGCGTTTTGTGTGTGTAGTGGCACTGAGA
FD537735       <-- ..................................................
FD536851       <-- TTTTAAGTAAAAACATATACATGCGTTTTGTGTGTGTAGTGGCACTGAGA
EX891170       <-- ..................................................
EY895568       <-- TTT-AAGTAATAACATATACATGCGTTTTGTGTGTGT.............
EY899887       --> ..................................................
EV525794       --> ..................................................
EY898303       --> ..................................................
EY949816       --> ..................................................
FD551402       --> ..................................................
FD560701       --> ..................................................
FD557648       --> ..................................................
EX886887       --> ..................................................
EY915442       --> ..................................................
FD556035       --> ..................................................
EV550739       --> TTT-A-GTA-TA-CATATACATGCGTTTTGT...................
EV535028       --> TTT-AAGTAAAAACATATACATGCGTTTTGTGTGTGTAGTGGCACTGAGA

               1051   -   1101
UN22718        --> AGTAATATTGGTATTGGTAACAAGTTCTGCACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911289       <-- AGTAATATTGGTATTGGTAGCAAGTTCTac...
EV530441       <-- .................................
FD937385       <-- .................................
FD552403       <-- .................................
FD565059       <-- .................................
FD547302       <-- .................................
FD553712       <-- AGTAATA..........................
EY894396       <-- .................................
EV539799       <-- .................................
FD545364       <-- AGTAATATTGGTATTGGT...............
FD537735       <-- .................................
FD536851       <-- AGTAATATTGGTATTGGTAACAAGTTTTGCAtt
EX891170       <-- .................................
EY895568       <-- .................................
EY899887       --> .................................
EV525794       --> .................................
EY898303       --> .................................
EY949816       --> .................................
FD551402       --> .................................
FD560701       --> .................................
FD557648       --> .................................
EX886887       --> .................................
EY915442       --> .................................
FD556035       --> .................................
EV550739       --> .................................
EV535028       --> AGTAATATTGGTATTGGTAACAAGTTCTGCACT