1      -     51
UN22755        --> GGGAGAAGCGGAAGGAGCGCGGAAGTCTCCATACTGCGATTTACGTTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544008       <-- ..................................................
EW729640       <-- ..................................................
EY942177       <-- ..................................................
FD936613       <-- ..................................................
EY922254       --> GGGAGAAGCGGGAGGAGCGCGGAAGTCTCCATACTGCGATTTACGTTTTC
FD559554       --> .GGAGAAGCGGAAGGAGCGCGGAAGTCTCCATACTGCGATTTACGTTTTC
FD966215       --> .GGAGAAGCGGAAGGAGCGCGGAAGTCTCCATACTGCGATTTACGTTTTC
EV548313       --> ..ggGAAGCGGAAGGAGCGCGGAAGTCTCCATACTGCGATTTACGTTTTC
EW726002       --> ..................................................
EV566660       --> ..................................................

               51     -    101
UN22755        --> CCGATGACGTCCACCTTAATCTCCTCTGTTCTCTCTTCCTCTATCTTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544008       <-- ..................................................
EW729640       <-- ..................................................
EY942177       <-- ..................................................
FD936613       <-- ..................................................
EY922254       --> CCGACGACGTCCACCTTAATCTCCTCTGTTCTCTCCTCCTCTATCTTCCC
FD559554       --> CCGATGACGTCCACCTTAATCTCCTCTGTTCTCTCTTCCTCTATCTTCCC
FD966215       --> CCGATGACGTCCACCTTAATCTCCTCTGTTCTCTCTTCCTCTATCTTCCC
EV548313       --> CCGATGACGTCCACCTTAATCTCCTCTGTTCTCTCTTCCTCTATCTTCCC
EW726002       --> ..................................................
EV566660       --> ..................................................

               101    -    151
UN22755        --> TACCGAATATCGCAGCTGGTTTCGAATTCCGGCGACTTCAATTTCCGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544008       <-- ..................................................
EW729640       <-- ..................................................
EY942177       <-- ..................................................
FD936613       <-- ..................................................
EY922254       --> TACCGAATATCGCAGCTGGTTTCGAATTCCGGCGACTTCAATTTCCGGAG
FD559554       --> TACCGAATATCGCAGCTGGTTTCGAATTCCGGCGACTTCAATTTCCGGAG
FD966215       --> TACCGAACATCGCAGCTGGTTTCGAATTCCGGCGACTTCAATTTTCGGAG
EV548313       --> TACCGAATATCGCAGCTGGTTTCGAATTCCGGCGACTTCAATTTCCGGAG
EW726002       --> .............................................gGGAG
EV566660       --> ..................................................

               151    -    201
UN22755        --> TTAGCAATGTCCGCGTGGCGAAACGACGTCGTTTGAAAATTGTCGCCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544008       <-- ..................................................
EW729640       <-- ..................................................
EY942177       <-- ..................................................
FD936613       <-- ..................................................
EY922254       --> TTAGCAATGTCCGCGTGGCGAAACGACGTCGTTTGAAAATTGTCGCCAAG
FD559554       --> TTAGCAATGTCCGCGTGGCGAAACGACGTCGTTTGAAAATTGTCGCCAAG
FD966215       --> TTAGCAATGTCCGCGTGGCGAAACGACGTCGTCTGAGAGTTGTCTCCAAA
EV548313       --> TTAGCAATGTCCGCGTGGCGAAACGACGTCGTTTGAAAATTGTCGCCAAG
EW726002       --> TTAGCAATGTCCGCGTGGCGAAACGACGTCGTTTGAAAATTGTCGCCAAG
EV566660       --> ............................gCGTTTGAAAATTGTCGCCAAG

               201    -    251
UN22755        --> TCACTCGATCTTCCTCTTCTTCCCTTCAGCATGAGCGAGGTTCTTGTACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544008       <-- ...........................AGCATGAGCGAGGTTCTTGTACC
EW729640       <-- ...........................AGCATGAGCGAGGTTCTTGTACC
EY942177       <-- ..................................................
FD936613       <-- ..................................................
EY922254       --> TCACTCGATCTTCCTCTTCTTCCCTTCAGCATGAGCGAGGTTCTTGTACC
FD559554       --> TCACTCGATCTTCCTCTTCTTCCCTTCAGCATGAGCGAGGTTCTTGTACC
FD966215       --> TCACTCGATCTTCCTCTTCTTCCCTTCAGCATGAGCGAGGTTCTTGTACC
EV548313       --> TCACTCGATCTTCCTCTTCTTCCCTTCAGCATGAGCGAGGTTCTTGTACC
EW726002       --> TCACTCGATCTTCCTCTTCTTCCCTTCAGCATGAGCGAGGTTCTTGTACC
EV566660       --> TCACTCGATCTTCCTCTTCTTCCCTTCAGCATGAGCGAGGTTCTTGTACC

               251    -    301
UN22755        --> AACGGAGAGTAAAACATTGCATTTGTACGAAGCAAGATACTTGGCACTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544008       <-- AACGGAGAGTAAAACATTGCATTTGTACGAAGCAAGATACTTGGCACTAC
EW729640       <-- AACGGAGAGTAAAACATTGCATTTGTACGAAGCAAGATACTTGGCACTAC
EY942177       <-- ..................................................
FD936613       <-- ..................................................
EY922254       --> AACGGAGAGTAAAACATTGCATTTGTACGAAGCAAGATACTTGGCACTAC
FD559554       --> AACGGAGAGTAAAACATTGCATTTGTACGAAGCAAGATACTTGGCACTAC
FD966215       --> AACGGAGAGTAAAACATTGCATTTGTACGAAGCAAGATACTTGGCACTAC
EV548313       --> AACGGAGAGTAAAACATTGCATTTGTACGAAGCAAGATACTTGGCACTAC
EW726002       --> AACGGAGAGTAAAACATTGCATTTGTACGAAGCAAGATACTTGGCACTAC
EV566660       --> AACGGAGAGTAAAACATTGCATTTGTACGAAGCAAGATACTTGGCACTAC

               301    -    351
UN22755        --> TTGAAGAGTCGATGAAAAGAAAGAAGAATATGTTTGTTCATTTCATTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544008       <-- TTGAAGAGTCGATGAAAAGAAAGAAGAATATGTTTGTTCATTTCATTCTC
EW729640       <-- TTGAAGAGTCGATGAAAAGAAAGAAGAATATGTTTGTTCATTTCATTCTC
EY942177       <-- ..................................................
FD936613       <-- ..................................................
EY922254       --> TTGAAGAGTCGATGAAAAGAAAGAAGAATATGTTTGTTCATTTCATTCTC
FD559554       --> TTGAAGAGTCGATGAAAAGAAAGAAGAATATGTTTGTTCATTTCATTCTC
FD966215       --> TTGAAGAGTCGATGAAAAGAAAGAAGAATATGTTTGTTCATTTCATTCTC
EV548313       --> TTGAAGAGTCGATGAAAAGAAAGAAGAATATGTTTGTTCATTTCATTCTC
EW726002       --> TTGAAGAGTCGATGAAAAGAAAGAAGAATATGTTTGTTCATTTCATTCTC
EV566660       --> TTGAAGAGTCGATGAAAAGAAAGAAGAATATGTTTGTTCATTTCATTCTC

               351    -    401
UN22755        --> GATCCTATTTCGATTAGTGAGGAAGCAACAGAAGCATCCTTTGCTGCTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544008       <-- GATCCTATTTCGATTAGTGAGGAAGCAACAGAAGCATCCTTTGCTGCTCG
EW729640       <-- GATCCTATTTCGATTAGTGAGGAAGCAACAGAAGCATCCTTTGCTGCTCG
EY942177       <-- ..................................................
FD936613       <-- ..................................................
EY922254       --> GATCCTATTTCGATTAGTGAGGAAGCAACAGAAGCATCCTTTGCTGCTCG
FD559554       --> GATCCTATTTCGATTAGTGAGGAAGCAACAGAAGCATCCTTTGCTGCTCG
FD966215       --> GATCCTATTTCGATTAGTGAGGAAGCAACAGAAGCATCCTTTGCTGCTCG
EV548313       --> GATCCTATTTCGATTAGTGAGGAAGCAACAGAAGCATCCTTTGCTGCTCG
EW726002       --> GATCCTATTTCGATTAGTGAGGAAGCAACAGAAGCATCCTTTGCTGCTCG
EV566660       --> GATCCTATTTCGATTAGTGAGGAAGCAACAGAAGCATCCTTTGCTGCTCG

               401    -    451
UN22755        --> ATATGGCTGCTTAGTACTTATTGAAAATGTCGAGAGATTAGACATTGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544008       <-- ATATGGCTGCTTAGTACTTATTGAAAATGTCGAGAGATTAGACATTGGAG
EW729640       <-- ATATGGCTGCTTAGTACTTATTGAAAATGTCGAGAGATTAGACATTGGAG
EY942177       <-- ......CTGCTTAGTACTTATTGAAAATGTCGAGAGATTAGACATTGGAG
FD936613       <-- ..................................................
EY922254       --> ATATGACTGTTTAGTACTTATTGAAAATGTCGAGAGATTAGACATTGGAG
FD559554       --> ATATGGCTGTTTAGTACTTATTGAAAATGTCGAGAGATTAGACATTGGAG
FD966215       --> ATATGGCTGCTTAGTACTTATTGAAAATGTCGAGAGATTAGACATTGGAG
EV548313       --> ATATGGCTGCTTAGTACTTATTGAAAATGTCGAGAGATTAGACATTGGAG
EW726002       --> ATATGGCTGCTTAGTACTTATTGAAAATGTCGAGAGATTAGACATTGGAG
EV566660       --> AGATGGCTGTTTAGTACTTATTGAAAATGTCGAGAGATTAGACATTGGAG

               451    -    501
UN22755        --> CACTTGTCTCGATTAGAGGAGCTGGTCGTGTGAAGATTTCGAGAATTCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544008       <-- CACTTGTCTCGATTAGAGGAGCTGGTCGTGTGAAGATTTCGAGAATTTTA
EW729640       <-- CACTTGTCTCGATTAGAGGAGCTGGTC-TGTGAAGATTTCGAGAATTCTA
EY942177       <-- CACTTGTCTCGATTAGAGGAGCTGGTCGTGTGAAGATTTCGAGAATTCTA
FD936613       <-- ..................................................
EY922254       --> CACTTGTCTCGATTAGAGGAGCTGGTCGTGTGAAGATTTCGAGAATTCTA
FD559554       --> CACTTGTCTCGATTAGAGGAGCTGGTCGTGTGAAGATTTCGAGAATTCTA
FD966215       --> CACTTGTCTCGATTAGAGGAGCTGGTCGTGTGAAGATTTCGAGAATTCTA
EV548313       --> CACTTGTCTCGATTAGAGGAGCTGGTCGTGTGAAGATTTCGAGAATTTTA
EW726002       --> CACTTGTCTCGATTAGAGGAGCTGGTC-TGTGAAGATTTCGAGAATTCTA
EV566660       --> CACTTGTCTCGATTAGAGGAGCTGGTCGTGTGAAGATTTCGAGAATTCTA

               501    -    551
UN22755        --> GGGGCAGATCCTTATTTGTCTGGAGAGGTCAGACCAATACAAGATCGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544008       <-- GGGGCAGATCCTTATTTGTCTGGAGAGGTCAGACCAATACAAGATCGTTT
EW729640       <-- GGGGCAGATCCTTATTTGTCTGGAGAGGTCAGACCAATACAAGATCGTTT
EY942177       <-- GGGGCAGATCCTTATTTGTCTGGAGAGGTCAGACCAATACAAGATCGTTT
FD936613       <-- ..................................................
EY922254       --> GGGGCAGATCCTTATTTGTCTGGAGAGGTCAGACCAATACAAGATCGTTT
FD559554       --> GGGGCAGATCCTTATTTGTCTGGAGAGGTCGGACCAATACAAGATCTTTT
FD966215       --> GGGGCAGATCCTTATTTGTCTGGAGTGGTCAGACCAATACAAGACCGTTT
EV548313       --> GGGGCAGATCCTTATTTGTCTGGAGAGGTCAGACCAATACAAGATCGTTT
EW726002       --> GGGGCAGATCCTTATTTGTCTGGAGAGGTCAGACCAATACAAGATCGTTT
EV566660       --> GGGGCAGATCCTTATTTGTCTGGAGAGGTCAGACCAGTACAAGATCGTTT

               551    -    601
UN22755        --> TAATTATGAGAGCAGCGATGAAATAACCTCAAAAATATCCAACCTAAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544008       <-- TAATTATGAGAGCAGCGATGAAATAACCTCAAAAATATACAACCTAAAGG
EW729640       <-- TAATTATGAGAGCAGCGATGAAATAACCTCAAAAATATCCAACCTAAAGG
EY942177       <-- TAATTATGAGAGCAGCGATGAAATAACCTCAAAAATATCCAACCTAAAGG
FD936613       <-- ....................AAATAACCTCAAAAATATCCAACCTAAAGG
EY922254       --> TAATTATGAGAGCAGCGATGAAATAACCTCAAAAATATCCAACCTAAAGG
FD559554       --> TAATTATGAGAGCAGCGATGAAATAACCTCAAAAATATCCAACCTAAAGG
FD966215       --> TAATTATGAGAGCAGCGATGAAATAACCTCAAAAATATCCAACCTAAAGG
EV548313       --> TAATTATGAGAGCAGCGATGAAATAACCTCAAAAATATACAACCTAAAGG
EW726002       --> TAATTATGAGAGCAGCGATGAAATAACCTCAAAAATATCCAACCTAAAGG
EV566660       --> TAATTATGAGAGCAGCTATGAAATAACCTCAAAAATATCCAACCTAAAGG

               601    -    651
UN22755        --> AATCTATCAAGAATCTCAACAGCTTGGAGATCAAACTTAAGGCTCCAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544008       <-- AATCTATCAAGAATCTCAACAGCTTGGAGATCAAACTTAAGGCTCCAGAT
EW729640       <-- AATCTATCAAGAATCTCAACAGCTTGGAGATCAAACTTAAGGCTCCAGAT
EY942177       <-- AATCTATCAAGAATCTCAACAGCTTGGAGATCAAACTTAAGGCTCCAGAT
FD936613       <-- AATTTATCAAGAATCTCAACAGCTTGGAGATCAAACTTAAGGCTCCAGAT
EY922254       --> AATCTATCAAGAATCTCAACAGCTTGGAGATCAAACTTA-GGCTCCAGAT
FD559554       --> AATCTATCAAGAATCTCAACAGCTTGGAGATCAAACTTAAGGCTCCAGAT
FD966215       --> AATCTATCAAGAATCTCAACAGCTTGGAGATCAAACTTAAGGCTCCAGAA
EV548313       --> AATCTATCAAGAATCTCAACAGCTTGGAGATCAAACTTAAGGCTCCAGAT
EW726002       --> AATCTATCAAGAATCTCAACAGCTTGGAGATCAAACTTAAGGCTCCAGAT
EV566660       --> AATCTATCAAGAATCTCAACAGCTTGGAGATCAAACTTAAGGCTCCAGAT

               651    -    701
UN22755        --> GACTCGCTGCTTCAAACTCGTCTCTTTAACTCTTTGAAATGGGCTGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544008       <-- GACCCGCTGCTTCAAACTCGTCTCTTTAACTCTTTGAAATGGGCTGAAGA
EW729640       <-- GACTCGCTGCTTCAAACTCGTCTCTTTAACTCTTTGAAATGGGCTGAAGA
EY942177       <-- GACTCGCTGCTTCAAACTCGTCTCTTTAACTCTTTGAAATGGGCTGAAGA
FD936613       <-- GACTCGCTGCTTCAAACTCGTTTCTTTAACTTTTTGAAATGGGCTGAAGA
EY922254       --> GACTCGCTGCTTCAAACTCGTCTCTTTAACTCTTTGAAATGGGCTGAAGA
FD559554       --> GACTCGCTGCTTCAAACTCGTCTCTTTA-CTCTTTGAAATGGGCTGA-GA
FD966215       --> GACTCGCTGCTTCAAACTCGTCTCTTTA-CTCTTTGAA-TGGGCTGAAGA
EV548313       --> GACCCGCTGCTTCAAACTCGTCTCTTTAACTCTTTGAAATGGGCT.....
EW726002       --> GACTCGCTGCTTCAAACTCGTCTCTTTAACTCTTTGAAATGGGCTGAAGA
EV566660       --> GACTCGCTGCTTCAAACTCGTCTCTTTAACTCTTTGAAATGGGCTGAAGA

               701    -    751
UN22755        --> TGAGCCACCGGGAGAATGTGAAGAATCCTTTTTTCCTTCCCTTCAAGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544008       <-- TGAGCCACCGGGAGAATGTGAAGAATCCTTTTTTCCTTCCCTTCAAGAAC
EW729640       <-- TGAGCCACCGGGAGAATGTGAAGAATCCTTTTTTCCTTCCCTTCAAGAAC
EY942177       <-- TGAGCCACCGGGAGAATGTGAAGAATCCTTTTTTCCTTCCCTTCAAGAAC
FD936613       <-- TGAGCCCCCGGGAGAATGTGAAGAATCCTTTTTTCCTTCCCTTCAAGAAC
EY922254       --> TGAGCCACCGGGAGAATGTGAA-AATCCTTTTT-CCTTCCCTTCA-G-AC
FD559554       --> TGA...............................................
FD966215       --> TGAGC-ACCGGGAG....................................
EV548313       --> ..................................................
EW726002       --> TGAGCCACCGGGAGAATGTGAAGAATCCTTTTTTCCTTCCCTTCAAGAAC
EV566660       --> TGAGCCACCGGGAGAATGTGAAAAATCCTTTTTTCCTTCCCTTCAAGAAC

               751    -    801
UN22755        --> GTTTATCATTCGCTGCGTTTCAACCGGTTTCAGGAGTCACACAGTCGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544008       <-- GTTTATCATTCGCTGCGTTTCAACCGGTTTCCGGAGTCACACCGTCGGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW729640       <-- GTTTATCATTCGCTGCGTTTCAACCGGTTTCAGGAGTCACACAGTCGGAA  Raphanus sativus cv Early Scarlet Globe
EY942177       <-- GTTTATCATTCGCTGCGTTTCAACCGGTTTCAGGAGTCACACAGTCGGAA  Raphanus sativus cv Rat-Tail Radish #3870
FD936613       <-- GTTTATCATTCGCTGCGTTTCAACCGGTTTCAGGAGTCACACAGTCGGAA  Raphanus sativus var. oleiformis
EY922254       --> GTTTATCATTCGCTGCGTTTCA-CCGGTT-CCGGAGTCACACAGTCGGA-  Raphanus raphanistrum subsp. landra
FD559554       --> ..................................................  Raphanus raphanistrum subsp. landra
FD966215       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV548313       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW726002       --> GTTTATCATTCGCTGCGTTTCA-CCGGTTTCAG-AGTCACACAGTCAGAA  Raphanus sativus cv Early Scarlet Globe
EV566660       --> GTTTATCATTCGCTGCGTTTCAACCGGTTTCCGGAGTCACACAGTCGGAA  Raphanus raphanistrum subsp. landra

               801    -    851
UN22755        --> CTGTCAAGGTTACAACAGGAGAAATTAAAGGCAATGGATATAAAAGATAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544008       <-- CTATCAAGGTTACAACAGGAGAAATTAAAGGCAATGGATATAAAAGATAC
EW729640       <-- CTGTCAAGGTTACAACAGGAGAAATTAAAGGCAATGGATATAAAAGATAC
EY942177       <-- CTATCAAGGTTACAACAGGAGAAATTAAAGGCAATGGATATAAAAGATAC
FD936613       <-- CTGTCAAGGTTACAACAGGAGAAATTAAAGGCAATGGATATAAAAGATAC
EY922254       --> CTGTCAggtacacagagaataaagcatgga....................
FD559554       --> ..................................................
FD966215       --> ..................................................
EV548313       --> ..................................................
EW726002       --> CTGT..............................................
EV566660       --> CTGTCAAGGTTACAACAAGAGAAATTAAAGGCAATGGATATAAAAGATAC

               851    -    901
UN22755        --> AATGGAGAGGTTAAAACTTTCAATGGGACTCATCAAGGAGAACATTTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544008       <-- AACGGAGAGGTTAAAACTTTCAATGGGACTCATCAAGGATAACATTTCTT
EW729640       <-- AATGGAGAGGTTAAAACTTTCAATGGGACTCATCAAGGAGAACATTTCTT
EY942177       <-- AATGGAGAGGTTAAAACTTTCAATGGGACTCATCAAGGAGAACATTTCTT
FD936613       <-- AATGGAGAGGTTAAAACTTTCAATGGGACTCATCAAGGAGAACATTTTTT
EY922254       --> ..................................................
FD559554       --> ..................................................
FD966215       --> ..................................................
EV548313       --> ..................................................
EW726002       --> ..................................................
EV566660       --> AATGGAGAGGTTAAAACTTTCAATGGGACTCATCAAGGAGAACATTTCTT

               901    -    951
UN22755        --> CAATTGCAGCCAAACTCGCCATCCAGTCTTTGGATATTCGTTAGAGTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544008       <-- CAATTGCAGCCAAACTCGCCATCCAGTCTTTGGATATTCGTTAGAGTTTA
EW729640       <-- CAATTGCAGCCAAACTCGCCATCCAGTCTTTGGATATTCGTTAGAGTTTA
EY942177       <-- CAATTGCAGCCAAACTCGCCATCCAGTCTTTGGATATTCGTTAGAGTTTA
FD936613       <-- CAATTGCAGCCAAACTCGCCATCCAGTTTTTGGATATTCGTTAGAGTTTA
EY922254       --> ..................................................
FD559554       --> ..................................................
FD966215       --> ..................................................
EV548313       --> ..................................................
EW726002       --> ..................................................
EV566660       --> CAATTGCAGCCAAACTGGCCATCCAGTCTTTGGATTTTCGTTAGAGTTTA

               951    -   1001
UN22755        --> TAATATGTCTCTAATTGTAAATGTGCCAGATTGATGAATTTTTAATTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544008       <-- TAATATGTCTCTAATTGTAAATGTGCCAGATTGATGAATTTTTAATTAAA
EW729640       <-- TAATATGTCTCTAATTGTAAATGTGCCAGATTGATGAATTTTTAATTAAA
EY942177       <-- TAATATGTCTCTAATTGTAAATGTGCCAGATTGATGAATTTTTAATTAAA
FD936613       <-- TAATATGTTTTTAATTGTAAATGTGCCAGATTGATGAATTTTTAATTAAA
EY922254       --> ..................................................
FD559554       --> ..................................................
FD966215       --> ..................................................
EV548313       --> ..................................................
EW726002       --> ..................................................
EV566660       --> TAATATGTCTCTAATTGTAAATGTGCCAGATTGATGAtt...........

               1001   -   1051
UN22755        --> ATTGAGTTGACCTTCATACCTCCTTTTTTCCAATATGTAAATTACATAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544008       <-- ATTGAGTTGACCTTCATACCTCCTTTTTCCCAATATGTAAATTACATAGA
EW729640       <-- ATTGAAATGACC......................................
EY942177       <-- ATTGAGTTGACCTTCATACCTCCTTTTTTCCTATATGTAAATTACATAGA
FD936613       <-- ATTGCAATGACCTTCATACCTCCTTTTTTCCAATATGTAAATTACATAGA
EY922254       --> ..................................................
FD559554       --> ..................................................
FD966215       --> ..................................................
EV548313       --> ..................................................
EW726002       --> ..................................................
EV566660       --> ..................................................

               1051   -   1101
UN22755        --> TTTGATATTTTAAACACTTTATATAAGCTTTAAAGTCTGACTTTTTGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544008       <-- TTTGATATTTTAAACACTTTATATAAGCTTc..................
EW729640       <-- .................................................
EY942177       <-- TTTGATATTTTAAACACTTTATATAAGCTTTAAAGTCTGACTTTTTGAC
FD936613       <-- TTTGAT...........................................
EY922254       --> .................................................
FD559554       --> .................................................
FD966215       --> .................................................
EV548313       --> .................................................
EW726002       --> .................................................
EV566660       --> .................................................