RadishBase

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Alignment for radish unigene UN22818

               1      -     51
UN22818        --> AGTGCAACAACTCAATTCATAGATAGACGTTTTTTTAGTTATTACATAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938958       <-- AGTGCAACAACTCAATTCATAGATAGACGTTTTTTTAGTTATTACATAGG
FY438865       <-- ..................................................
FY442855       <-- ..................................................
EV550217       <-- ..................................................
FD569939       <-- ..................................................
FD558427       <-- ..................................................
FD551149       <-- ..................................................
EW725411       <-- ..................................................
FD579181       <-- ..................................................
FY436791       <-- ..................................................
EY934984       --> AGTGCAACAACTCAATTCATAGATAGACGTTTTTTTAGTTATTACATAGG
EW730788       --> ..................................................
FY451481       --> ..................................................
EV545539       --> ..............................................caga
FD547025       --> ..............................................caga
FD554330       --> ..................................................
EV571590       --> ..................................................

               51     -    101
UN22818        --> AGTTTTCAGAAAGCAAACCTTTTTTAATA-T-AACTATAGAAGTTCTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938958       <-- AGTTTTCAGAAAGCAAACCTTTTTTAATA-T-AACTATAGAAGTTCTTTA  Raphanus sativus cv Early Scarlet Globe
FY438865       <-- ..................................................  Raphanus sativus cv GSK3-1
FY442855       <-- ..................................................  Raphanus sativus cv GSK3-1
EV550217       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569939       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD558427       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD551149       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725411       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD579181       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY436791       <-- ..................................................  Raphanus sativus cv GSK3-1
EY934984       --> AGTTTTCAGAAAGCAAACCTTTTTTAATA-T-AACTATAGAAGTTCTTTA  Raphanus sativus cv Early Scarlet Globe
EW730788       --> ......CAGAAAGCAAACCTTTTTTAATA-T-AACTATAGAAGTTCTTCA  Raphanus sativus cv Early Scarlet Globe
FY451481       --> ........agAAGCAA-CCTTTTTTAATA-T-AACTATAGAAGTTCTTTA  Raphanus sativus cv GSK3-1
EV545539       --> aagcaaacctttttaaatagcataTAATA-TTAACTATAGAAGTTCTTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547025       --> aagcaaacctttttaaatagcataTAATATT-AACTATAGAAGTGCTTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554330       --> ..........ctaaatagcatataatATA-T-AACTATAGAAGTGCTTTA  Raphanus raphanistrum subsp. landra
EV571590       --> .............................gT-AACTATAGAAGTGCTTTA  Raphanus raphanistrum subsp. landra

               101    -    151
UN22818        --> TTCTCAAATACAAGACAGTGA--AGTAAAGCTATACATTTGGCTT--ATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938958       <-- TTCTCAAATACAAGACAGTGA--AGTAAAGCTATACATTTGGCTT--ATA
FY438865       <-- ..................................................
FY442855       <-- ..................................................
EV550217       <-- ..................................................
FD569939       <-- ..................................................
FD558427       <-- ..................................................
FD551149       <-- ..................................................
EW725411       <-- ..................................................
FD579181       <-- ..................................................
FY436791       <-- ..................................................
EY934984       --> TTCTCAAATACAAGACAGTGA--AGTAAAGCTATACATTTGGCTT--ATA
EW730788       --> TTCTCAAATACAAGACAGTGA--AGTAAAGCTATACATTTGGCTTTAAAA
FY451481       --> TTCTCAAATACAAGACAGTGAGAAGTAAAGCTATACATTTGGCTT--ATA
EV545539       --> TTCTCAAATACAAGACAGTGA--AGTAAAGCTATACATTTGGCTTTAAAA
FD547025       --> TTCTCAAATACAAGACAGTGA--AATAAAACTATACATTTGGCTT--ATA
FD554330       --> TTCTCAAATACAAGACAGTGA--AGTAAAGCTATACATTTGGCTT--ATA
EV571590       --> TTCTCAAATACAAGACAGTGA--AGTAAAGCTATACATTTGGCTT-TAAA

               151    -    201
UN22818        --> AAAGCCTTAGAAACTAGGCAATCATCTTCAAAACATAAA--G----GTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938958       <-- AAAGCCTTAGAAACTAGGCAATCATCTTCAAAACATAAA--G----GTCT  Raphanus sativus cv Early Scarlet Globe
FY438865       <-- ..................................................  Raphanus sativus cv GSK3-1
FY442855       <-- ..................................................  Raphanus sativus cv GSK3-1
EV550217       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569939       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD558427       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD551149       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725411       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD579181       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY436791       <-- ..................................................  Raphanus sativus cv GSK3-1
EY934984       --> AAAGCCTTAGAAACTAGGCAATCATCTTCAAAACATAAA--G----GTCT  Raphanus sativus cv Early Scarlet Globe
EW730788       --> AAAGCCTTAAAAACTAGGCAATCATCTT-AAAACATAAA--G----GTCT  Raphanus sativus cv Early Scarlet Globe
FY451481       --> AAAGCCTTAGAAACTAGGCAATCATCTTCAAAACATAAA--G----GTCT  Raphanus sativus cv GSK3-1
EV545539       --> AAAGCCTTAAAAACTAGGCAATCATCTTAAAAACATA---------GT--  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547025       --> AAAGCCTTAAAAACTAGGCAATCATCTTCAAAACATAAAAAG----GTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554330       --> AAAGCCTTAGAAACTAGGCAATCATCTTCAAAACATAAA--G----GTCT  Raphanus raphanistrum subsp. landra
EV571590       --> AAAGCCTTAGAAACTAGGCAATCATCTTCAAAACATAAA--GAAAGGTCT  Raphanus raphanistrum subsp. landra

               201    -    251
UN22818        --> ACTACATATCCAGCTTGGGTTTCCGGCTAAGCTCTGAGTATTGACCGCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938958       <-- ACTACATATCCAGCTTGGGTTTCCGGCTAAGCTCTGAGTATTGACCGCCC
FY438865       <-- ..................................................
FY442855       <-- ..................................................
EV550217       <-- ..................................................
FD569939       <-- ..................................................
FD558427       <-- ..................................................
FD551149       <-- ..................................................
EW725411       <-- ..................................................
FD579181       <-- ..................................................
FY436791       <-- ..................................................
EY934984       --> ACTACATATCCAGCTTGGGTTTCCGGCTAAGCTCTGAGTATTGACCGCCC
EW730788       --> ACTACATATCCAGCTTGGGTTTCCGGCTAAGCTCTGAGTATTGACCGCCC
FY451481       --> ACTACATATCCATCTTGGGTTTCCGGCTAAGCTCTGAGTATTGACCGCCC
EV545539       --> ACTACATATCCAGCTTGGGTTTCCGGCTAAGCTCTGAGTATTGACCGCCC
FD547025       --> ACTACATATCCAGCTTGGGTTTCCGGCTAAGCTCTGAGTATTGACCGCCC
FD554330       --> ACTAC-TATCCAGCTTGGGTTTCCGGCTAAGCTCTGAGTATTGACCGCCC
EV571590       --> ACTACATATCCAGCTTGGGTTTCCGGCTAAGCTCTGAGTATTGACCGCCC

               251    -    301
UN22818        --> ATCAACTGCAATATCTCTTCCCACAAGTTTTCCGGTGAAGCTCCACATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938958       <-- ATCAACTGCAATATCTCTTCCCACAAGTTTTCCGGTGAAGCTCCACATAT
FY438865       <-- ..................................................
FY442855       <-- ..................................................
EV550217       <-- ..................................................
FD569939       <-- ..................................................
FD558427       <-- ..................................................
FD551149       <-- ..................................................
EW725411       <-- ..................................................
FD579181       <-- ..................................................
FY436791       <-- ..................................................
EY934984       --> ATCAACTGCAATATCTCTTCCCACAAGTTTTCCGGTGAAGCTCCACATAT
EW730788       --> ATCAACTGCAATATCTCTTCCCACAAGTTTTCCGGTGAAGCTCCACATAT
FY451481       --> ATCAACTGCAATATCTCTTCCCACAAGTTTTCCGGTGAAGCTCCACATAT
EV545539       --> ATCAACTGCAATATCTCTTCCCACAAGTTTTCCGGTGAAGCTCCACATAT
FD547025       --> ATCAACTGCAATATCTCTTCCCACAAGTTTTCCGGTGAAGCTCCACATAT
FD554330       --> ATCAACTGCAATATCTCTTCCCACAAGTTTTCCGGTGAAGCTCCACATAT
EV571590       --> ATCAACTGCAATATCTCTTCCCACAAGTTTTCCGGTGAAGCTCCACATAT

               301    -    351
UN22818        --> TAACTCCGAGCTGCACGCAGCGACATGCCAGTAATCTGATTCGATCTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938958       <-- TAACTCCGAGCTGCACGCAGCGACATGCCAGTAATCTGATTCGATCTCTT
FY438865       <-- ..................................................
FY442855       <-- ..................................................
EV550217       <-- ..................................................
FD569939       <-- ..................................................
FD558427       <-- ..................................................
FD551149       <-- ..................................................
EW725411       <-- ..................................................
FD579181       <-- ..................................................
FY436791       <-- ..................................................
EY934984       --> TAACTCCGAGCTGCACGCAGCGACATGCCAGTAATCTGATTCGATCTCTT
EW730788       --> TAACTCCGAGCTGCACGCAGCGACATGCCAGTAATCTGATTCGATCTCTT
FY451481       --> TAACTCCGAGCTGCACGCAGCGACATGCCAGTAATCTGATTCGATCTCTT
EV545539       --> TAACTCCGAGCTGCACGCAGCGACATGCCAGTAATCTGATTCGATCTCTC
FD547025       --> TAACTCCGAGCTGCACGCAGCGACGTGCCAGTAATCTGATTCGATCTCTT
FD554330       --> TAACTCCGAGCTGCACGCAGCAACATGCCAGTAATCTGATTCGATCTCTT
EV571590       --> TAACTCCGAGCTGCACGCAGCGACATGCCAGTAATCTGATTCGATCTCTT

               351    -    401
UN22818        --> CTCTGAGCTGATCCAGTTGCCAACCTGCGTAACCAACAAAGAATCTAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938958       <-- CTCTCAGCTGATCCAGTTGCCAACCTGCGTAACCAACAAAGAATCTAAAG
FY438865       <-- ..................................................
FY442855       <-- ..................................................
EV550217       <-- ..................................................
FD569939       <-- ..................................................
FD558427       <-- ..................................................
FD551149       <-- ..................................................
EW725411       <-- ..................................................
FD579181       <-- ..................................................
FY436791       <-- ..................................................
EY934984       --> CTCTCAGCTGATCCAGTTGCCAACCTGCGTAACCAACAAAGAATCTAAAG
EW730788       --> CTCTGAGCTGATCCAGTTGCCAACCTGCGTAACCAACAAAGAATCTAAAG
FY451481       --> CTCTGAGCTGATCCAGTTGCCAACCTGCGTAACCAACAAAGAATCTAAAG
EV545539       --> CTCTGAGCTGATCCAGTTGCCAACCTGCGTAACCAACAAAGAATCTAAAG
FD547025       --> CTCTGAGCTGATCCAGTTGCCAACCTGCGTAACCAACAAAGAATCTAAAG
FD554330       --> CTCTGAGCTGATCCAGTTGCCAACCTGCGTAACCAACAAAGAAT--AAAG
EV571590       --> CTCTGAGCTGATCCAGTTGCCAACCTGCGTAACCAACAAAGAATCTAAAG

               401    -    451
UN22818        --> TCCTGTGGCTCAAGCATTCCTTTCTTTACAAGTACCGCAGCTTCATCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938958       <-- TCCTGTGGCTCAAGCATTCCTTTCTTTACAAGTACCGCAGCTTCATCCAG
FY438865       <-- .................................ACCGCAGCTTCATCCAA
FY442855       <-- ..................................................
EV550217       <-- ..................................................
FD569939       <-- ..................................................
FD558427       <-- ..................................................
FD551149       <-- ..................................................
EW725411       <-- ..................................................
FD579181       <-- ..................................................
FY436791       <-- ..................................................
EY934984       --> TCCTGTGGCTCAAGCATTCCTTTCTTTACAAGTACCGCAGCTTCATCCAG
EW730788       --> TCCTTTGGCTCAAGCAATCCTTTCTTTACAAGTACCGCAGCTTCATCCAA
FY451481       --> TCCTGTGGCTCAAGCATTCCTTTCTTTACAAGTACCGCAGCTTCATCCAA
EV545539       --> TCCTGTGGCTCAAGCATTCCTTTCTTTACAAGTACCGCAGCTTCGTCCAA
FD547025       --> TCCTGTGGCTCAAGCATTCCTTTCTTTACAAGTACCGCAGCTTCGTCCAA
FD554330       --> TCCTGTGGCTCAAGCAATCCTTTCTTTACAAGTACCGCAGCTTCATCCAA
EV571590       --> TCCTGTGGCTCAAGCATTCCTTTCTTTACAAGTACCGCAGCTTCATCCAA

               451    -    501
UN22818        --> AGTGTTTCGAGCACCAAAGTTAAGCCCCGGCATGACTTCTTCAAGCCCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938958       <-- AGTGTTTCGAGCACCAAAGTTAAGCCCCGGCATGACTTCTTCAAGCCCAG  Raphanus sativus cv Early Scarlet Globe
FY438865       <-- AGTGTTTCGAGCACCAAAGTTAAGCCCCGGCATGACTTCTTCAAGCGCAG  Raphanus sativus cv GSK3-1
FY442855       <-- ........GAGCACCAAAGTTAAGCCCCGGCATGACTTCTTCAAGCGCAG  Raphanus sativus cv GSK3-1
EV550217       <-- ..............................CATGACTTCTTCAAGCCCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569939       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD558427       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD551149       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725411       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD579181       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY436791       <-- ..................................................  Raphanus sativus cv GSK3-1
EY934984       --> AGTGTTTCGAGCACCAAAGTTAAGCCCCGGCATGACTTCTTCAAGCCCAG  Raphanus sativus cv Early Scarlet Globe
EW730788       --> -GTGTTTCGAGCACCAAAGTTTAGGCCCGGCATGACCTCTTCAAGCCCAG  Raphanus sativus cv Early Scarlet Globe
FY451481       --> AGTGTTTCGAGCACCAAAGTTAAGCCCCGGCATGACTTCTTCAAGCGCAG  Raphanus sativus cv GSK3-1
EV545539       --> AGTGTTTCGAGCACCAAAGTTAAGCCCTGGCATGACTTCTTCAAGCCCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547025       --> AGTGTTTCGAGCACCAAAGTTAAGCCCTGGCATGACTTCTTCAAGCCCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554330       --> AGTGTTTCGAGCACCAAAGTTAAGCCCCGGCATGACCTCTTCAAGCCCAG  Raphanus raphanistrum subsp. landra
EV571590       --> AGTGTTTCGAGCACCAAAGTTAAGCCCCGGCATGACTTCTTCAAGCGCAG  Raphanus raphanistrum subsp. landra

               501    -    551
UN22818        --> GTATCTTGGTTTTATCCGCGGTTTTCAACAGGAACATGCTGGCTTCAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938958       <-- GTATCTTGGTTTTATCAGCGGTTTTCAGCAGGAACATGCTGGCTTCAAGA  Raphanus sativus cv Early Scarlet Globe
FY438865       <-- GTATCTTGGTTTTATCCGAGGTTTTCAACAGGAACATGCTGGCTTCAAGA  Raphanus sativus cv GSK3-1
FY442855       <-- GTATCTTGGTTTTATCCGAGGTTTTCAACAGGAACATGCTGGCTTCAAGA  Raphanus sativus cv GSK3-1
EV550217       <-- GTATCTTGGTTTTATCCGCGGTTTTCAACAGGAACATGCTGGCTTCAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569939       <-- ............TATCCGCGGTTTTCAACAGGAACATGCTGGCTTCAAGA  Raphanus sativus cv Early Scarlet Globe
FD558427       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD551149       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725411       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD579181       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY436791       <-- ..................................................  Raphanus sativus cv GSK3-1
EY934984       --> GTATCTTGGTTTTATCAGCGGTTTTCAGCAGGAACATGCTGGCTTCAAGA  Raphanus sativus cv Early Scarlet Globe
EW730788       --> GTATCTTGGTTTTATCCGCGGTTTTCAACAGGAACATGCTGGCTTCAAGA  Raphanus sativus cv Early Scarlet Globe
FY451481       --> GTATCTTGGTTTTATCCGAGGTTTTCAACAGGAACATGCTGGCTTCAAGA  Raphanus sativus cv GSK3-1
EV545539       --> GTATCTTGGTTTTATCCGCGGTTTTCAACAGGAACATGCTGGCTTCAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547025       --> GTATCTTGGTTTTATCCGCGGTTTTCAACAGGAACATGCTGGCTTCAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554330       --> GTATCTTGGTTTTATCCGAGGTTTTCAACAGGAACATGCTGGCTTCAAGA  Raphanus raphanistrum subsp. landra
EV571590       --> GTATCTTGGTTTTATCCGAGGTTTTCAACAGGAACATGCTGGCTTCAAGA  Raphanus raphanistrum subsp. landra

               551    -    601
UN22818        --> GGCCCACCAAAGTACAAGGAACACTCTGAGAAGGTGGTAGCGAGCTCGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938958       <-- GGCCCACCAAAGTACAAGGAACACTCTGAGAAGGTGGTAGCCAGCTCGGT
FY438865       <-- GGCCCACCAAAGTACAAGGAACACTCTGAGAAGGTGGTAGCGAGCTCGGT
FY442855       <-- GGCCCACCAAAGTACAAGGAACACTCTGAGAAGGTGGTAGCGAGCTCGGT
EV550217       <-- GGCCCACCAAAGTACAAGGAACACTCTGAGAAGGTGGTAGCGAGCTCGGT
FD569939       <-- GGCCCACCAAAGTACAAGGAACACTCTGAGAAGGTGGTAGCGAGCTCGGT
FD558427       <-- ........................TCTGAGAAGGTGGTAGCGAGCTCGGT
FD551149       <-- ..................................................
EW725411       <-- ..................................................
FD579181       <-- ..................................................
FY436791       <-- ..................................................
EY934984       --> GGCCCACCAAAGTACAAGGAACACTCTGAGAAGGTGGTAGCCAGCTCGGT
EW730788       --> GGCCCACCAAAGTACAAGGAACACTCTGAGAAGGTGGTAGCGAGCTCGGT
FY451481       --> GGCCCACCAAAGTACAAGGAACACTCTGAGAAGGTGGTAGCGAGCTCGGT
EV545539       --> GGCCCACCAAAGTACAAGGAACACTCTGAGAAGGTGGTAGCGAGCTCGGT
FD547025       --> GGCCCACCAAAGTACAAGGAGCACTCTGAGAAGGTGGTAGCGAGCTCGGT
FD554330       --> GGCCCACCAAAGTACAAGGAGCACTCTGAGAAGGTGGTAGCGAGCTCGGT
EV571590       --> GGCCCACCAAAGTACAAGGAACACTCTGAGAAGGTGGTAGCGAGCTCGGT

               601    -    651
UN22818        --> TTTAGTTGATTTCATGTGCTTGATGTTTTTGTGAAGCGGACGGTTGATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938958       <-- TTTAGTCGATTTCATGTGCTTGATGTTTTTGTGAAGCGGACGGTTGATGA
FY438865       <-- TTTAGTTGATTTCATGTGCTTGATGTTTTTGTGAAGCGGACGGTTGATGA
FY442855       <-- TTTAGTTGATTTCATGTGCTTGATGTTTTTGTGAAGCGGACGGTTGATGA
EV550217       <-- TTTAGTTGATTTCATGTGCTTGATGTTTTTGTGAAGAGGACGGTTGATGA
FD569939       <-- TTTAGTTGATTTCATGTGCTTGATGTTTTTGTGAAGCGGACGGTTGATGA
FD558427       <-- TTTAGTTGATTTCGTGTGCTTGATGTTTTTGTGAAGCGGACGGTTGATGA
FD551149       <-- ..................................................
EW725411       <-- ..................................................
FD579181       <-- ..................................................
FY436791       <-- ..................................................
EY934984       --> TTTAGTCGATTTCATGTGCTTGATGTTTTTGTGAAGCGGACGGTTGATGA
EW730788       --> TTTAGTTGATTTCATGTGCTTGATGTTTTTGTGAAGCGGACGGTTGATGA
FY451481       --> TTTAGTTGATTTCATGTGCTTGATGTTTTTGTGAAGCGGACGGTTGATGA
EV545539       --> TTTAGTTGATTTCATGTGCTTGATGTTTTTGTGAAGAGGACGGTTGATGA
FD547025       --> TTTAGTTGATTTCATGTGCTTGATGTTTTTGTGAAGCGGACGGTTGATGA
FD554330       --> TTTAGTTGATTTCGTGTGCTTGATGTTTTTGTGAAGCGGACGGTTGATGA
EV571590       --> TTTAGTTGATTTCATGTGCTTGATGTTTTTGTGAAGCGGACGGTTGATGA

               651    -    701
UN22818        --> CAACTCCGAATGGCCCTTCTTGTGGGTGGTTGGTTCCTGCTCTAAGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938958       <-- CAACTCCGAATGc.....................................  Raphanus sativus cv Early Scarlet Globe
FY438865       <-- CAACTCCAAATGGCCCTTCTTGTGGGTGGTTGGTTCCTGCTCTAAGAAGA  Raphanus sativus cv GSK3-1
FY442855       <-- CAACTCCAAATGGCCCTTCTTGTGGGTGGTTGGTTCCTGCTCTAAGAAGA  Raphanus sativus cv GSK3-1
EV550217       <-- CAACTCCGAATGGCCCTTCTTGTGGGTGGTTGGTTCCTGCTCTCAGAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569939       <-- CAACTCCGAATGGCCCTTCTTGTGGGTGGTTGGTTCCTGCTCTAAGAAGA  Raphanus sativus cv Early Scarlet Globe
FD558427       <-- CAACTCCAAATGGCCCTTCTTGTGGGTGGTTGGTTCCTGCTCTAAGAAGA  Raphanus raphanistrum subsp. landra
FD551149       <-- ...................TTGTGGGTGGTTGGTTCCTGCTCTAAGAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725411       <-- ..................ctcGTGGGTGGTTGGTTC-TGCTCTAAGAAGA  Raphanus sativus cv Early Scarlet Globe
FD579181       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY436791       <-- ..................................................  Raphanus sativus cv GSK3-1
EY934984       --> CAACTCCGAATGc.....................................  Raphanus sativus cv Early Scarlet Globe
EW730788       --> CAACTCCGAATGGCCCTTCTCGTGGGTGGTTGGTTCCTGCTCTAAGAAGA  Raphanus sativus cv Early Scarlet Globe
FY451481       --> CAACTCCAAATGGCCCTTCTTGTGGGTGGTTGGTTCCTGCTCTAAGAAGA  Raphanus sativus cv GSK3-1
EV545539       --> CAACTCCGAATGGCCCTTCTTGTGGGTGGTTGGTTCCTGCTCTCAGAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547025       --> CAACTCCGAATGGCCCTTCTTGTGGGTGGTTGGTTCCTGCTCTAAGAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554330       --> CAACTCCAAATGGCCCTTCTTGTGGGTGGTTGGTTCCTGCTCTAAGAAGA  Raphanus raphanistrum subsp. landra
EV571590       --> CAACTCCAAATGGCCCTTCTTGTGGGTGGTTGGTTCCTGCTCTAAGAAGA  Raphanus raphanistrum subsp. landra

               701    -    751
UN22818        --> AGCACAACGGTTCTCGCAAATGTTCTATAACCGTCAAGCTTCTCCGTGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938958       <-- ..................................................
FY438865       <-- AGCACAACGGTCCTCGCAAATGTTCTATAACCGTCAAGCTTCTCCGTGGC
FY442855       <-- AGCACAACGGTCCTCGCAAATGTTCTATAACCGTCAAGCTTCTCCGTGGC
EV550217       <-- AGCACAACGGTTCTCGCAAATGTTCTATAACCGTCAAGCTTCTCCGTGGC
FD569939       <-- AGCAAAACGGTTCTCGCAGATGTTCTATAACCGTCAAGCTTCTCCGTGGC
FD558427       <-- AGCACAACGGTTCTCGCAAATGTTCTATAACCGTCAAGCTTCTCCGTGGC
FD551149       <-- AGCACAACGGTTCTCGCAAATGTTCTATAACCGTCAAGCTTCTCCGTGGC
EW725411       <-- AGCAAAACGGTTCTCGCAAATGTTCTATAACCGTCAAGCTTCTCCGTGGC
FD579181       <-- ...................................AAGCTTCTCCGTGGC
FY436791       <-- ..................................................
EY934984       --> ..................................................
EW730788       --> AGCAAAACGGTTCTCGCAAATGTTCTATAACCGTCAAGCTTCTCCGTGGC
FY451481       --> AGCACAACGGTCCTCGCAAATGTTCTATAACCGTCAAGCTTCTCCGTGGC
EV545539       --> AGCACAACGGTTCTCGCAAATGTTCTATAACCGTCAAGCTTCTCCGTGGC
FD547025       --> AGCACAACGGTTCTCGCAAATGTTCTATAACCGTCAAGCTTCTCCGTGGC
FD554330       --> AGCACAACGGTTCTCGCAAATGTTCTATAACCGTCAAGCTTCTCCGTGGC
EV571590       --> AGCACAACGGTTCTCGCAAATGTTCTATAACCGTCGAGCTTCTCCGTGGC

               751    -    801
UN22818        --> AACTAGAACACAGCCAGTCTCAGGGAAAGGAATCGGATGTGCCCATTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938958       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY438865       <-- AACTAGAACACAGCCAGTCTCAGGGAAAGGAATGGGATGTGCCCATTTCA  Raphanus sativus cv GSK3-1
FY442855       <-- AACTAGAACACAGCCAGTCTCAGGGAAAGGAATGGGATGTGCCCATTTCA  Raphanus sativus cv GSK3-1
EV550217       <-- AACTAGAACACAGCCAGTCTCAGGGAAAGGAATCGGATGTGCCCATTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569939       <-- AACTAGAACACAGCCAGTCTCAGGGAAAGGAATCGGATGTGCCCATTTCA  Raphanus sativus cv Early Scarlet Globe
FD558427       <-- AACTAGAACACAGCCAGTCTCAGCGAAAGGAATCGGATGTGCCCATTTCA  Raphanus raphanistrum subsp. landra
FD551149       <-- AACTAGAACACAGCCAGTCTCAGGGAA-GGAATCGGATGTGCCCATTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725411       <-- AACTAGAACACAGCCAGTCTCAGGGAAAGGAATCGGATGTGCCCATTTCC  Raphanus sativus cv Early Scarlet Globe
FD579181       <-- AACTAGAACACAGCCAGTCTCAGGGAAAGGAATCGGATGTGCCCATTTCA  Raphanus sativus cv Rat-Tail Radish #3870
FY436791       <-- ............GCCAGTCTCAGG-AAAGGAATGGGATGTGCCCATTTCA  Raphanus sativus cv GSK3-1
EY934984       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW730788       --> AACTAGAACACAGCCAGTCTCAGGGAAAGGAATCGGATGTGCCCATTTCC  Raphanus sativus cv Early Scarlet Globe
FY451481       --> AACTAGAACACAGCCAGTCTCAGGGAAAGGAATGGGATGTGCCCATTTCA  Raphanus sativus cv GSK3-1
EV545539       --> AACTAGA...........................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547025       --> AACTAGA...........................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554330       --> AA................................................  Raphanus raphanistrum subsp. landra
EV571590       --> AACTAGAACACAGCCAGTCTCAGGGAAAGGAATGGGATGTGCCCATTTCA  Raphanus raphanistrum subsp. landra

               801    -    851
UN22818        --> GTCCTCTTGGTTCAGCTTCAGGAGGAGATGTTGTGTCTGGTTTGTGACCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938958       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY438865       <-- GTCCTCTTGGTTCAGCTTCAGGAGGAGAGGTTGTGTCTGGTTTGTGACCC  Raphanus sativus cv GSK3-1
FY442855       <-- GTCCTCTTGGTTCAGCTTCAGGAGGAGAGGTTGTGTCTGGTTTGTGACCC  Raphanus sativus cv GSK3-1
EV550217       <-- GTCCTCTTGGTACAGCTTCAGG---AGATGCAGTGTCTGGTTTGTGACCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569939       <-- GTCCTCTTGGTTCAGCTTCAGGAGGAGATGTTGTGTCTGGTTTGTGACCC  Raphanus sativus cv Early Scarlet Globe
FD558427       <-- GTCCTCTTGGTTCAGCTTCAGGAGGAGAGGTTGTGTCTGGTTTGTGACCC  Raphanus raphanistrum subsp. landra
FD551149       <-- GTCCTCTTGGTTCAGCTTCAGGAGGAGATGTTGTGTCTGGTTTGTGACCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725411       <-- GTCCTCTTGGTTCAGCTTCAGGAGGAGATGTTGTGTCTGGTTTGTGACCC  Raphanus sativus cv Early Scarlet Globe
FD579181       <-- GTCCTCTTGGTTCAGCTTCAGGAGGAGATGTTGTGTCTGGTTTGTGACCC  Raphanus sativus cv Rat-Tail Radish #3870
FY436791       <-- GTCCTCTTGGTTCAGCTTCAGGAGGAGAGGTTGTGTCTGGTTTGTGACCC  Raphanus sativus cv GSK3-1
EY934984       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW730788       --> GTCCTCTTGGTTCAGCT.................................  Raphanus sativus cv Early Scarlet Globe
FY451481       --> GTCCTCTTGGTTCAGCTTCAGGAGGAGAGGTTGTGTCTGGTTTGTGACCC  Raphanus sativus cv GSK3-1
EV545539       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547025       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554330       --> ..................................................  Raphanus raphanistrum subsp. landra
EV571590       --> GTCCTCTTGGTTCAGCTT................................  Raphanus raphanistrum subsp. landra

               851    -    901
UN22818        --> TCACCTGCTGCTTTTTCTTCCTGCTCCTTCATAAACAAGTTTGCTCTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938958       <-- ..................................................
FY438865       <-- TCACCTGCTGCTTTTTCTTCCTGCTCCTTCATAAACAAGTTTGCTCTGAA
FY442855       <-- TCACCTGCTGCTTTTTCTTCCTGCTCCTTCATAAACAAGTTTGCTCTGAA
EV550217       <-- TCACCTGCTGCTTTTTCTTCCTGCTCCTTCATAAACAAGTTTGCTCTGAA
FD569939       <-- TCACCTGCTGCTTTTTCTTCCTGCTCCTTCATAAACAAGTTTGCTCTGAA
FD558427       <-- TCACCTGCTGCTTTTTCTTCCTGCTCCTTCATAAACAAGTTTGCTCTGAA
FD551149       <-- TCACCTGCTGCTTTTTCTTCCTGCTCCTTCATAAACAAGTTTGCTCTGAA
EW725411       <-- TCACCTGCTGCTTTTTCTTCCTGCTCCTTCATAAACAAGTTTGCTCTGAA
FD579181       <-- TCACCTGCTGCTTTTTCTTCCTGCTCCTTCATAAACAAGTTTGCTCTGAA
FY436791       <-- TCACCTGCTGCTTTTTCTTCCTGCTCCTTCATAAACAAGTTTGCTCTGAA
EY934984       --> ..................................................
EW730788       --> ..................................................
FY451481       --> TCACCTGCTGCTTTTTCTTCCTGCTCCTTCATAAACAAGTTTGCTCTGAA
EV545539       --> ..................................................
FD547025       --> ..................................................
FD554330       --> ..................................................
EV571590       --> ..................................................

               901    -    951
UN22818        --> CTCTCTCCAATCCGTATTAAGACCAAATGGCTTTGGAGTAGAAGAGGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938958       <-- ..................................................
FY438865       <-- CTCTCTCCAATCCGTATTAAGACCAAATGGCTTTGGAGTAGAAGAGGAGT
FY442855       <-- CTCTCTCCAATCCGTATTAAGACCAAATGGCTTTGGAGTAGAAGAGGAGT
EV550217       <-- CTCTCTCCAATCCGTATTAAGACCAAATGGCTTTGGAGTAGAAGAGGAGT
FD569939       <-- CTCTCTCCAATCCGTATTAAGACCAAATGGCTTTGGAGTAGAAGAGGAGT
FD558427       <-- CTCTCTCCAATCCGTATTAAGACCAAATGGCTTTGGAGTAGCAGAGGAGT
FD551149       <-- CTCTCTCCAATCCGTATTAAGACCAAACGGCTTTGGAGTAGCAAAGGAGT
EW725411       <-- CTCTCTCCAATCCGTATTAAGACCAAATGGCTTTGGAGTAGAAGAGGAGT
FD579181       <-- CTCTCTCCAATCCGTATTAAGACCAAACGGCTTTGGAGTAGCAGAGGAGT
FY436791       <-- CTCTCTCCAATCCGTATTAAGACCAAATGGCTTTGGAGTAGAAGAGGAGT
EY934984       --> ..................................................
EW730788       --> ..................................................
FY451481       --> CTCTCTCCAAT.......................................
EV545539       --> ..................................................
FD547025       --> ..................................................
FD554330       --> ..................................................
EV571590       --> ..................................................

               951    -   1001
UN22818        --> CACCTGATTTGTTCCCATTAGAAGGCTTGTTTTCTTGAGAAGCATCTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938958       <-- ..................................................
FY438865       <-- CACCTGATTTGTTCCCATTAGAAGGCTTGTTTTCTTGAGAAGCATCTCCT
FY442855       <-- CACCTGATTTGTTCCCATTAGAAGGCTTGTTTTCTTGAGAAGCATCTCCT
EV550217       <-- CACCTGATTTGTTCCCATTAGAAGGCTTGTTTTCTTGAGAAGCATCTCCT
FD569939       <-- CACCTGATTTGTTCCCATTAGAAGGCTTGTTTTCTTGAGAAGCATCTCCT
FD558427       <-- CACCTGATTTGTTCCCATTAGAAGGCTTGTTTTCTTGAGAAGCATCTCCT
FD551149       <-- CACCTGATTTGTTCCCATTAGAAGGCTTGTTTTCTTGAGAAGCATCTCCT
EW725411       <-- CACCTGATTTGTTCCCATTAGAAGGCTTGTTTTCTTGAGAAGCATCTCCT
FD579181       <-- CACCTGATTTGTTCCCATTAGAAGGCTTGTTTTCTTGAGAAGCATCTCCT
FY436791       <-- CACCTGATTTGTTCCCATTAGAAGGCTTGTTTTCTTGAGAAGCATCTCCT
EY934984       --> ..................................................
EW730788       --> ..................................................
FY451481       --> ..................................................
EV545539       --> ..................................................
FD547025       --> ..................................................
FD554330       --> ..................................................
EV571590       --> ..................................................

               1001   -   1051
UN22818        --> CCAGAAGCAGAAGAATCGTCGTTACTCTTGTTCGAGGTAGCTCTAACAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938958       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY438865       <-- CCAGAAGCAGAAGAATCGTCGTTACTCTTGTTCGAGGTAGCTCTAACAAC  Raphanus sativus cv GSK3-1
FY442855       <-- CCAGAAGCAGAAGAATCGTCGTTACTCTTGTTCGAGGTAGCTCTAACAAC  Raphanus sativus cv GSK3-1
EV550217       <-- CCAGAAGCAGAAGAATCGTCGTTACTCTTGTTCGAGGTAGCTCTAACAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569939       <-- CCAGAAGCAGAAGAATCGTCGTTACTCTTGTTCGAGGTAGCTCTAACAAC  Raphanus sativus cv Early Scarlet Globe
FD558427       <-- CCAGAAGCAGAAGAATCGTCGTTACTCTTGCTCGAGGCAGCTCGAACAAC  Raphanus raphanistrum subsp. landra
FD551149       <-- CCAGAAGCAGAAGAATCGTCGTTACTCTTGTTCAACGCAGCTCGAACAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725411       <-- CCAGAAGCAGAAGAATCGTCGTTACTCTTGTTCGAGGTAGCTCTAACAAC  Raphanus sativus cv Early Scarlet Globe
FD579181       <-- CCAGAAGCAGAAGAATCGTCGTTACTCTTGTTCGACGCAGCTCGAACAAC  Raphanus sativus cv Rat-Tail Radish #3870
FY436791       <-- CCAGAAGCAGAAGAATCGTCGTTACTCTTGTTCGAGGTAGCTCTAACAAC  Raphanus sativus cv GSK3-1
EY934984       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW730788       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY451481       --> ..................................................  Raphanus sativus cv GSK3-1
EV545539       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547025       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554330       --> ..................................................  Raphanus raphanistrum subsp. landra
EV571590       --> ..................................................  Raphanus raphanistrum subsp. landra

               1051   -   1101
UN22818        --> CAAAGAACGATACCCAGAAGTAGAAAGTTTACGCTTTTGAAACCTAATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938958       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY438865       <-- CAAAGAACGATACCCAGAAGTAGAAAGTTTACGCTTTTGAAACCTAATCT  Raphanus sativus cv GSK3-1
FY442855       <-- CAAAGAACGATACCCAGAAGTAGAAAGTTTACGCTTTTGAAACCTAATCT  Raphanus sativus cv GSK3-1
EV550217       <-- CAAAGAACGATACCCAGAAGTAGAAAGTTTACGCTTTTGAAACCTAATCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569939       <-- GAAAGAACGGAACCCAGAAGTAGAAAGTTTACGCTTTTGAAACCTAATCT  Raphanus sativus cv Early Scarlet Globe
FD558427       <-- CGAAGAACGATACCCAGAAGTAGAAAGTTTACGCTTTTGAAACCTAATCT  Raphanus raphanistrum subsp. landra
FD551149       <-- GAAAGAACGGAACCCAGAAGTAGAAAGTTTACGCTTTTGAAACCTAATCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725411       <-- GAAAGAACGGAACCCAGAAGTAGAAAGTTTACGCTTTTGAAACCTAATAT  Raphanus sativus cv Early Scarlet Globe
FD579181       <-- GAAAGAACGGAACCCAGAAGTAGAAAGTTTACGCTTTTGAAACCTAATCT  Raphanus sativus cv Rat-Tail Radish #3870
FY436791       <-- CAAAGAACGATACCCAGAAGTAGAAAGTTTACGCTTTTGAAACCTAATCT  Raphanus sativus cv GSK3-1
EY934984       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW730788       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY451481       --> ..................................................  Raphanus sativus cv GSK3-1
EV545539       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547025       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554330       --> ..................................................  Raphanus raphanistrum subsp. landra
EV571590       --> ..................................................  Raphanus raphanistrum subsp. landra

               1101   -   1151
UN22818        --> CCAAGGCGCCGAGTTTCCTTGAGAGCGATGACTTGTCAGGGATCGATGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938958       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY438865       <-- CCAAGGCGCCGAGTTTCCTTGAGAGCGATGACTTGTCAGGGATCGATGAG  Raphanus sativus cv GSK3-1
FY442855       <-- CCAAGGCGCCGAGTTTCCTTGAGAGCGATGACTTGTCAGGGATCGATGAG  Raphanus sativus cv GSK3-1
EV550217       <-- CCAAGGCGCCGAGTTTCCTTGAGAGCGATGACTTGTCAGGGATCGATGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569939       <-- CCAAGACGCCGAGTTTCCTTGAGAGCGATGACTTGTCAGGGATCGATGAG  Raphanus sativus cv Early Scarlet Globe
FD558427       <-- CCAAGGCGCCGAGTTTCCTTGAGAGCGATGACTTGTCAGGGATCGATGAG  Raphanus raphanistrum subsp. landra
FD551149       <-- CCAAGACGCCGAGTTTCCTTGAGAGCGATGACTTGTCAGGGATCGATGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725411       <-- CCAAGACGCCGAGTTTCCTTGAGAGCGATGACTTGTCAGGGATCGATGAG  Raphanus sativus cv Early Scarlet Globe
FD579181       <-- CCAAGACGCCGAGTTTCCTTGAGAGCGATGACTTGTCAGGGATCGATGAG  Raphanus sativus cv Rat-Tail Radish #3870
FY436791       <-- CCAAGGCGCCGAGTTTCCTTGAGAGCGATGACTTGTCAGGGATCGATGAG  Raphanus sativus cv GSK3-1
EY934984       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW730788       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY451481       --> ..................................................  Raphanus sativus cv GSK3-1
EV545539       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547025       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554330       --> ..................................................  Raphanus raphanistrum subsp. landra
EV571590       --> ..................................................  Raphanus raphanistrum subsp. landra

               1151   -   1201
UN22818        --> GAGAAGATTGGGTTTCGGATCGCCGAGTCAAGGGTGCAGAGATCCATCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938958       <-- ..................................................
FY438865       <-- GAGAAGATTGGGTTTCGGATCGCCGAGTCAAGGGTGCAGAGATCCATCGA
FY442855       <-- GAGAAGATTGGGTTTCGGATCGCCGAGTCAAGGGTGCAGAGATCCATCGA
EV550217       <-- GAGAAGATTGGGTTTCGGATCGCCGAGTCAAGGGTGCAGAGATCCATCGA
FD569939       <-- GAGAAGATTGGGTTTCGGATCGCCGAGTCAAGGGTGCAGAGATCCATCGA
FD558427       <-- GAGAAGATTGGGTTTCGGATCGCCGAGTCAAGGGTGCAGAGATCCATCGA
FD551149       <-- GAGAAGATTGGGTTTCGGATCGCCGAGTCAAGGGTGCAGAGATCCATCGA
EW725411       <-- GAGAAGATTGGGTTTCGGATCGCCGAGTCAAGGGTGCAGAGATCCATCGA
FD579181       <-- GAGAAGATTGGGTTTCGGATCGCCGAGTCAAGGGTGCAGAGATCCATCGA
FY436791       <-- GAGAAGATTGGGTTTCGGATCGCCGAGTCAAGGGTGCAGAGATCCATCGA
EY934984       --> ..................................................
EW730788       --> ..................................................
FY451481       --> ..................................................
EV545539       --> ..................................................
FD547025       --> ..................................................
FD554330       --> ..................................................
EV571590       --> ..................................................

               1201   -   1251
UN22818        --> GAAGTCCGATGATTAAGAGTGGAGTGGTAAGAGTCTGATTCGTTAGGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938958       <-- ..................................................
FY438865       <-- GAAGTCCGATGATTAAGAGTGGAGTGGTAAGAGTCTGATTCGTTAGGAAA
FY442855       <-- GAAGTCCGATGATTAAGAGTGGAGTGGTAAGAGTCTGATTCGTTAGGAAA
EV550217       <-- GAAGTCCGATGATTAAGAGTGGAGTGGTAAGAGTCTGATTCGTTAGAAAA
FD569939       <-- GAAGTCCGATGATTAAGAGTGGAGTccc......................
FD558427       <-- GAAGTCCGATGATTAAGAGTGGAGTGGTAAGAGTCTGATTCGTTAGGAAA
FD551149       <-- GAAGTCCGATGATTAAGAGTGGAGTGGTAAGAGTCTGATTCGTTAGGAAA
EW725411       <-- GAAGTCCGATGATTAAGAGTGGAGTGGTAAGAGTCTGATTCGTTAGGAAA
FD579181       <-- GAAGTCCGATGATTAAGAGTGGAGTGGTAAGAGTCTGATTCGTTAGGAAA
FY436791       <-- GAAGTCCGATGATTAAGAGTGGAGTGGTAAGAGTCTGATTCGTTAGGAAA
EY934984       --> ..................................................
EW730788       --> ..................................................
FY451481       --> ..................................................
EV545539       --> ..................................................
FD547025       --> ..................................................
FD554330       --> ..................................................
EV571590       --> ..................................................

               1251   -   1301
UN22818        --> CGATGATGAGAAATCTAAGAGAGGGTGTGTGGATTATCTGCGATTGATAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938958       <-- ..................................................
FY438865       <-- CGATGATGAGAAATCTAAGAGAGGGTGTGTGGA.................
FY442855       <-- CGATGATGAGAAATCTAAGAGAGGGTGT......................
EV550217       <-- CGATGATGAGAAATCTcc................................
FD569939       <-- ..................................................
FD558427       <-- CGATGATGAGAAATCTAAGAGAGGGTGT--GGATTATCTcc.........
FD551149       <-- CGATGATGAGAAATCTcc................................
EW725411       <-- CGATGATGAGAAATCTAAGAGAGGGTGTGTGGATTATCTGCGATTcc...
FD579181       <-- CGATGATGAGAAATCTAAGAGAGGGTGTGTGGATTATCTGCGATTGATAG
FY436791       <-- CGATGATGAGAAATCTAAGAGAGGGTGT-TGGATTATCTGCGAT-GATAG
EY934984       --> ..................................................
EW730788       --> ..................................................
FY451481       --> ..................................................
EV545539       --> ..................................................
FD547025       --> ..................................................
FD554330       --> ..................................................
EV571590       --> ..................................................

               1301   -   1351
UN22818        --> GAACAGATGCGA
                   ~~~~~~~~~~~~
EY938958       <-- ............
FY438865       <-- ............
FY442855       <-- ............
EV550217       <-- ............
FD569939       <-- ............
FD558427       <-- ............
FD551149       <-- ............
EW725411       <-- ............
FD579181       <-- GAACAGATGCGA
FY436791       <-- GAACAG......
EY934984       --> ............
EW730788       --> ............
FY451481       --> ............
EV545539       --> ............
FD547025       --> ............
FD554330       --> ............
EV571590       --> ............