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Alignment for radish unigene UN22841

               1      -     51
UN22841        --> GGACCTCCATCAGTCTCATTCATCTCTACTCAAGGGTTTACTGGATCTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY912133       <-- ..................................................
FD574414       <-- ..................................................
EY909195       <-- ..................................................
FD573623       <-- ..................................................
EY916452       --> GGACCTCCATCAGTCTCATTCATCTCTACTCAAGGGTTTACTGGATCTAT
FD569409       --> GGACCTCCATCAGTCTCATTCATCTCTACTCAAGGGTTTACTGGATCTAT
EX746220       --> ................gATTCATCTCTACTCAAGGGTTTACTGGATCTAT
FY432932       --> ..................................................
EY913409       --> ..................................................
FD570407       --> ..................................................
EY912857       --> ..................................................

               51     -    101
UN22841        --> GGCGAATTTCTACCGGAAGTTGGCAATACGCGGTGGTGAAGGAGGAAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY912133       <-- ..................................................
FD574414       <-- ..................................................
EY909195       <-- ..................................................
FD573623       <-- ..................................................
EY916452       --> GGCGAATTTCTACCGGAAGTTGGCAATACGCGGTGGTGAAGGAGGAAGTG
FD569409       --> GGCGAATTTCTACCGGAAGTTGGCAATACGCGGTGGTGAAGGAGGAAGTG
EX746220       --> GGCGAATTTCTACCGGAAGTTGGCAATACGCGGTGGTGAAGGAGGAAGTG
FY432932       --> GGCGAATTTCTACCGGAAGTTGGCAATACGCGGTGGTGAAGGAGGAAGTG
EY913409       --> ..................................................
FD570407       --> ..................................................
EY912857       --> ..................................................

               101    -    151
UN22841        --> AATGGGACGATGATGTATACAAAGGTGTAAGAAAAGTCTACGTAGGGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY912133       <-- ..................................................
FD574414       <-- ..................................................
EY909195       <-- ..................................................
FD573623       <-- ..................................................
EY916452       --> AATGGGACGATGATGTATACAAAGGTGTAAGAAAAGTCTACGTAGGGCAA
FD569409       --> AATGGGACGATGATGTATACAAAGGTGTAAGAAAAGTCTACGTAGGGCAA
EX746220       --> AATGGGACGATGATGTATACAAAGGTGTAAGAAAAGTCTACGTAGGGCAA
FY432932       --> AATGGGACGATGATGTATACAAAGGTGTAAGAAAAGTCTACGTAGGGCAA
EY913409       --> ..................................................
FD570407       --> ..................................................
EY912857       --> ..................................................

               151    -    201
UN22841        --> GATCTCACACGTATTACTTACATCAAATTTGACTACGTGAAGGTTGATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY912133       <-- ..................................................
FD574414       <-- ..................................................
EY909195       <-- ..................................................
FD573623       <-- ..................................................
EY916452       --> GATCTCACACGTATTACTTACATCAAATTTGACTACGTGAAGGTTGATGG
FD569409       --> GATCTCACACGTATTACTTACATCAAATTTGACTACGTGAAGGTTGATGG
EX746220       --> GATCTCACACGTATTACTTACATCAAATTTGACTACGTGAAGGTTGATGG
FY432932       --> GATCTCACACGTATTACTTACATCAAATTTGACTACGTGAAGGTTGATGG
EY913409       --> ..................................................
FD570407       --> ..................................................
EY912857       --> ..................................................

               201    -    251
UN22841        --> CCAAGTAGTAACACGTGAACATGGGACAAAAGATCAAAACCCTAAAGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY912133       <-- ..................................................
FD574414       <-- ..................................................
EY909195       <-- ..................................................
FD573623       <-- ..................................................
EY916452       --> CCAACTAGTAACACGTGAACATGGGACAAAAGATCAAAACCCTAAAGAGT
FD569409       --> CCAAGTAGTAACACGTGAACATGGGACAAAAGATCAAAACCCTAAAGAGC
EX746220       --> CCAAGTAGTAACACGTGAACATGGGACAAAAGATCAAAACCCTAAAGAGT
FY432932       --> CCAAGTAGTAACACGTGAACATGGGACAAAAGATCAAAACCCTAAAGAGT
EY913409       --> ..................................................
FD570407       --> ..................................................
EY912857       --> ..................................................

               251    -    301
UN22841        --> TTGTTGTAGCTCAACACCCTGATGAATACATCATAGCGGTGGAGGGAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY912133       <-- ..................................................
FD574414       <-- ..................................................
EY909195       <-- ..................................................
FD573623       <-- ..................................................
EY916452       --> TTGTTGTAGCTCAACACCCTGATGAATACATCATAGCGGTGGAGGGAAGC
FD569409       --> TTGTTGTAGCTCAACACCCTGATGAATACATCATAGCGGTGGAGGGAAGC
EX746220       --> TTGTTGTAGCTCAACACCCTGATGAATACATCATAGCGGTGGAGGGAAGC
FY432932       --> TTGTTGTAGCTCAACACCCTGATGAATACATCATAGCGGTGGAGGGAAGC
EY913409       --> ..................................................
FD570407       --> ..................................................
EY912857       --> ..................................................

               301    -    351
UN22841        --> TACAACAAAGTGGGTCTCATTGGCACAGAAGTGATCACATCTCTCGTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY912133       <-- ..................................................
FD574414       <-- ..................................................
EY909195       <-- ..................................................
FD573623       <-- ..................................................
EY916452       --> TACAACAAAGTGGGTCTCATTGGCACAGAAGTGATCACATCTCTCGTCTT
FD569409       --> TACAACAAAGTGGGTCTCATTGGCACAGAAGTGATCACATCTCTCGTCTT
EX746220       --> TACAACAAAGTGGGTCTCATTGGCACAGAAGTGATCACATCTCTCGTCTT
FY432932       --> TACAACAAAGTGGGTCTCATTGGCACAGAAGTGATCACATCTCTCGTCTT
EY913409       --> ..................................................
FD570407       --> ..................................................
EY912857       --> ..................................................

               351    -    401
UN22841        --> CAAGACTTCAAAGGGTAGAAAGTCTCCAACGTTTGGTCCAAACTTGCTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY912133       <-- ..................................................
FD574414       <-- ..................................................
EY909195       <-- ..................................................
FD573623       <-- ..................................................
EY916452       --> CAAGACTTCAAAGGGTAGAAAGTCTCCAACGTTTGGTCCAAACTTGCTCG
FD569409       --> CAAGACTTCAAAGGGTAGAAAGTCTCCAACGTTTGGTCCAAACTTGCTTG
EX746220       --> CAAGACTTCAAAGGGTAGAAAGTCTCCAACGTTTGGTCCAAACTTGCTCG
FY432932       --> CAAGACTTCAAAGGGTAGAAAGTCTCCAACGTTTGGTCCAAACTTGCTCG
EY913409       --> ..................................................
FD570407       --> ..................................................
EY912857       --> ..................................................

               401    -    451
UN22841        --> GACTTGTGAATGGTACAAAGTTCGAGTTTGAGGATCACGGAAAGAAAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY912133       <-- ..................................................
FD574414       <-- ..................................................
EY909195       <-- ..................................................
FD573623       <-- ..................................................
EY916452       --> GACTTGTGAATGGTACAAAGTTCGAGTTTGAGGATCACGGAAAGAAAGTC
FD569409       --> GACTTGTGAATGGTACAAAGTTCGAGTTTGAGGATCACGGAAAGAAAGTC
EX746220       --> GACTTGTGAATGGTACAAAGTTCGAGTTTGAGGATCACGGAAAGAAAGTC
FY432932       --> GACTTGTGAATGGTACAAAGTTCGAGTTTGAGGATCACGGAAAGAAAGTC
EY913409       --> ..................................................
FD570407       --> ..................................................
EY912857       --> ..................................................

               451    -    501
UN22841        --> GTAGGGTTTCATGGGCGTGCGGGTGATGCCCTCGACGCCATTGGAGTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY912133       <-- ..................................................
FD574414       <-- ..................................................
EY909195       <-- ..................................................
FD573623       <-- ..................................................
EY916452       --> GTAGGGTTTCATGGGCGTGCGGGTGATGCCCTCGACGCCATTGGAGTTTA
FD569409       --> GTAGGGTTTCATGGGCGTGCGGGTGATGCCCTCGACGCCACTGGAGTTTA
EX746220       --> GTAGGGTTTCATGGGCGTGCGGGTGATGCCCTCGACGCCATTGGAGTTTA
FY432932       --> GTAGGGTTTCATGGGCGTGCGGGTGATGCCCTCGACGCCATTGGAGTTTA
EY913409       --> ..................................................
FD570407       --> ..................................................
EY912857       --> ..................................................

               501    -    551
UN22841        --> CTTTGTAATTCCCTCTCTCACACCTTTATTGTACAAGCTGGATGCTCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY912133       <-- ..................................................
FD574414       <-- ..................................................
EY909195       <-- ..................................................
FD573623       <-- ..................................................
EY916452       --> CTTTGTAATTCCTCCTCTCACACCTTTATTGTACAAGCTGGATGCTCAAG
FD569409       --> CTTTGTAATTCCCTCTCTCACACCTTTATTGTACAAGCTGGATGCTCAAG
EX746220       --> CTTTGCAATTCCCTCTCTCACACCTTTATTGTACAAGCTGGATGCT....
FY432932       --> CTTTGTAATTCCCTCTCTCACACCTTTATTGTACAAGCTGGATGCTCAAG
EY913409       --> ..................................................
FD570407       --> ..................................................
EY912857       --> ..................................................

               551    -    601
UN22841        --> GTGGTACAGAGGGACGTGTTTGGAATGATGGCTCTTTCGACGCCGTTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY912133       <-- ..................................................
FD574414       <-- ..................................................
EY909195       <-- ..................................................
FD573623       <-- ..................................................
EY916452       --> GTGGTACAGAGGGACGTGTTTGGAATGATGGCTCTTTCGACGCCGTTAAA
FD569409       --> GTGGTACAGAGGGACGTGTTTGGAATGATGGCTCTTTCGACGCCGTTAAA
EX746220       --> ..................................................
FY432932       --> GTGGTACAGAGGGACGTGTTTGGAATGATGGCTCTTTCGACGCCGTTAAA
EY913409       --> ......gAGAGGGACGTGTTTGGAATGATGGCTCTTTCGACGCCGTTAAA
FD570407       --> ..................................................
EY912857       --> ..................................................

               601    -    651
UN22841        --> AGGCTGAGCATTGGTCAAGATGATCATCGTATCACTTATTTAGAGTTCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY912133       <-- ..................................................
FD574414       <-- ..................................................
EY909195       <-- ..................................................
FD573623       <-- ..................................................
EY916452       --> AGGCTGAGCATTGGTCAAGATGATCATCGTATCACTTATTTAGAGTTCGA
FD569409       --> AGGCTGAGCATTGGTCAAGATGATCATCGTATCACTTATTTAGAGTTCGA
EX746220       --> ..................................................
FY432932       --> AGGCTGAGCATTGGTCAAGATGATCATCGTATCACTTATTTAGAGTTCGA
EY913409       --> AGGCTGAGCATTGGTCAAGATGATCATCGTATCACTTATTTAGAGTTCGA
FD570407       --> ..................................................
EY912857       --> ..................................................

               651    -    701
UN22841        --> GTATGCCAAAGGTGGCAAGTCAGAGAAACTTCACCATGGAGTGAAAGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY912133       <-- ..................................................
FD574414       <-- ..................................................
EY909195       <-- ..................................................
FD573623       <-- ..................................................
EY916452       --> GTATGCCAAAG-TGGCAAGTCAGAGAAACTTCACCATGGAGTG.......
FD569409       --> GTATGCCAAAGATG-CAAGTCAGAGAAACTTCACCATGGAGTGAAAG-AG
EX746220       --> ..................................................
FY432932       --> GTATGCCAAAGGTTGCAAGTCAGAGAAACTTCACCATGGAGTGAAAGGAG
EY913409       --> GTATGCCAAAGGTGGCAAGTCAGAGAAACTTCACCATGGAGTGAAAGGAG
FD570407       --> .............................................gGGAG
EY912857       --> ..................................................

               701    -    751
UN22841        --> GAACAACAAACGAGTTTGTGCTTGATTTCCCGGATGAATACATCAAATCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY912133       <-- ..................................................
FD574414       <-- ..................................................
EY909195       <-- ..................................................
FD573623       <-- ..................................................
EY916452       --> ..................................................
FD569409       --> --ACAACAAACGAGTTTGTGCTTGATTTCCCGGATGA-TACATCAA-TCG
EX746220       --> ..................................................
FY432932       --> GAACAACAAACGAGTTTGTGCTTGATTTCCCGGATGAATACATCAAATCG
EY913409       --> GAACAACAAACGAGTTTGTGCTTGATTTCCCGGATGAATACATCAAATCG
FD570407       --> GAACAACAAACGAGTTTGTGCTTGATTTCCCGGATGAATACATCAAATCG
EY912857       --> .....................................gTACATCAAATCG

               751    -    801
UN22841        --> GTGGCTGCAACCTATGATAAGCCAAACCTTTTTCAAAATACCGTCATCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY912133       <-- ..................................................
FD574414       <-- ..................................................
EY909195       <-- ..................................................
FD573623       <-- ..................................................
EY916452       --> ..................................................
FD569409       --> -TGGCTGCA-CCTATGATAAGCCAAAC--TTTTCAAA-TAC-GTCATCAC
EX746220       --> ..................................................
FY432932       --> GTGGCTGCAACCTATGATAAGCCAAACCTTTTTCAAAATACCGTCATCAC
EY913409       --> GTGGCTGCAACCTATGATAAGCCAAACCTTTTTCAAAATACCGTCATCAC
FD570407       --> GTGGCTGCAACCTATGATAAGCCAAACCTTTTTCAAAATACCGTCATCAC
EY912857       --> GTGGCTGCAACCTATGATAAGCCAAACCTTTTTCAAAATACCGTCATCAC

               801    -    851
UN22841        --> GTCGCTTACCATCCAAACATCAAAAGGGAGAACATCATCCTTTGGGTATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY912133       <-- GTCGCTTACCATCCAAACATCAAAAGGGAGAACATCATCCTTTGGGTATA
FD574414       <-- ..................................................
EY909195       <-- ..................................................
FD573623       <-- ..................................................
EY916452       --> ..................................................
FD569409       --> -TCGCTacatc.......................................
EX746220       --> ..................................................
FY432932       --> CTCGCTTACCATCCAAACATCAAAAGGGAGAACATCATCCTTTGGGTATA
EY913409       --> GTCGCTTACCATCTAAACATCAAAAGGGAGAACATCATCCTTTGGGTATA
FD570407       --> CTCGCTTACCATCCAAACATCAAAAGGGAGAACATCATCCTTTGGGTATA
EY912857       --> GTCGCTTACCATCCAAACATCAAAAGGGAGAACATCATCCTTTGGGTATA

               851    -    901
UN22841        --> CAAAGGGAAATAAGTTTGTTCTTGAGCAAAAGGATTGTCGCCTTGTCGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY912133       <-- CAAAGGGAAATAAGTTTGTTCTTGAGCAAAAGGATTGTCGCCTTGTCGGA
FD574414       <-- ..................................................
EY909195       <-- ..................................................
FD573623       <-- ..................................................
EY916452       --> ..................................................
FD569409       --> ..................................................
EX746220       --> ..................................................
FY432932       --> CAAAGGGGAATAAGTTTGTTC.............................
EY913409       --> CAAAGGGAAATAAGTTTGTTCTTGAGCAAAGGGATTGTCGCCTTGTCGGA
FD570407       --> CAAAGGGAAATAAGTTTGTTCTTGAGCAAAAGGATTGTCGCCTTGTCGTA
EY912857       --> CAAAGGGAAATAAGTTTGTTCTTGAGCAAAAGGATTGTCGCCTTGTCGGA

               901    -    951
UN22841        --> TTCCATGGACAACAAGGTGACGCTATTGATGCTCTAGGAGCATATTTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY912133       <-- TTCCATGGACAACAAGGTGACGCTATTGATGCTCTAGGAGCATATTTTGC
FD574414       <-- .............................TGCTCTAGGAGCATATTTTGC
EY909195       <-- ..................................................
FD573623       <-- ..................................................
EY916452       --> ..................................................
FD569409       --> ..................................................
EX746220       --> ..................................................
FY432932       --> ..................................................
EY913409       --> TTCCATGGACAACAAGGTGACGCTATTGATGCTCTAGGAGCATATTTTGC
FD570407       --> TTCCATGGACAACAAGGTGACGCTATTGATGCTCTAGGAGCATATTTTGC
EY912857       --> TTCCATGGACAACAAGGTGACGCTATTGATGCTCTAGGAGCATATTTTGC

               951    -   1001
UN22841        --> ACCTTTTATACCAGCCAAGAAACTACCGTCGGTAGGCGGCAACGGAGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY912133       <-- ACCTTTTATACCAGCCAAGAAACTACCGTCGGTAGGCGGCAACGGAGGAG
FD574414       <-- ACCTTTTATACCAGCCAAGAAACTACCGTCGGTAGGCGGCAACGGAGGCG
EY909195       <-- ..........................CGTCGGTAGGCGGCAACGGAGGAG
FD573623       <-- ................................TAGGCGGCAACGGAGGAG
EY916452       --> ..................................................
FD569409       --> ..................................................
EX746220       --> ..................................................
FY432932       --> ..................................................
EY913409       --> ACCTTTTATACCAGCCAAGAAACTACCGTCGGTAGGCGGCAACGGAGGAG
FD570407       --> ACCTTTTATACCAGCCAAGAAACTACCGTCGGTAGGCGGCAACGGAGGCG
EY912857       --> ACCTTTTATACCAGCCAAGAAACTACCGTCGGTAGGCGGCAACGGAGGAG

               1001   -   1051
UN22841        --> TTGCATGGGATGATGGTGTTTACGACGGTGTAAGAAAGATATACGTAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY912133       <-- TTGCATGGGGTGATGGTGTTTACGACGGTGTAAGAAAGATATACGTAGGA
FD574414       <-- TTGCATGGGATGACGGTGTTTACGACGGTGTAAGAAAGATATACGTAGGA
EY909195       <-- TTGCATGGGATGATGGTGTTTACGACGGTGTAAGAAAGATATACGTAGGA
FD573623       <-- TTGCATGGGATGATGGTGTTTACGACGGTGTAAGAAAGATATACGTAGGA
EY916452       --> ..................................................
FD569409       --> ..................................................
EX746220       --> ..................................................
FY432932       --> ..................................................
EY913409       --> TTGCATGGGATGATGGTGTTTACGACGGTGTAAGAAAGATATACGTAGGA
FD570407       --> TTGCATGGGATGACGGTGTTTACGACGGTGTAAGAAAGATATACGTAGGA
EY912857       --> TTGCATGGGATGATGGTGTTTACGACGGTGTAAGAAAGATATACGTAGGA

               1051   -   1101
UN22841        --> CAAGGTAACAACGGTGTATCCTTTGTCAAGTTTGAGTACACTAAGGGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY912133       <-- CAAGGTAACAACGGTGTATCCTTTGTCAAGTTTGAGTACACTAAGGGAAC
FD574414       <-- CAAGGTAACAACGGTGTATCCTTTGTCAAGTTTGAGTACACTAAGGGAAC
EY909195       <-- CAAGGTAACAACGGTGTATCCTTTGTCAAGTTTGAGTACACTAAGGGAAC
FD573623       <-- CAAGGTAACAACGGTGTATCCTTTGTCAAGTTTGAGTACACTAAGGTAAC
EY916452       --> ..................................................
FD569409       --> ..................................................
EX746220       --> ..................................................
FY432932       --> ..................................................
EY913409       --> CAAGGTAACAACGGTGTATCCTTTGTCAAGTTTGAGTACACTAAGGGAAC
FD570407       --> CAAGGTAACAACGGTGTATCCTTTGTCAAGTTTGAGTACACTAAGGGAAC
EY912857       --> CAAGGTAACAACGGTGTATCCTTTGTCAAGTTTGAGTACACTAAGGGAAC

               1101   -   1151
UN22841        --> AGACTTGGTACCTGGAGATGAACATGGCAAAGAGACGGTACTTGGAGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY912133       <-- AGACTTGGTACCTGGAGATGAACATGGCAAAGAGACGGTACTTGGAGCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD574414       <-- AGACTTGGTACCTGGAGATGAACATGGGAAAGAGACGGTACTTGGAGCTG  Raphanus sativus cv Early Scarlet Globe
EY909195       <-- TGACTTGGTACCTGGAGATGAACATGGCAAAGAGACGGTACTTGGAGCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD573623       <-- AGACTTGGTACCTGGAGATGAACATGGGAAAGAGACGGTACTTGGAGCTG  Raphanus sativus cv Early Scarlet Globe
EY916452       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569409       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX746220       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY432932       --> ..................................................  Raphanus sativus cv GSK3-1
EY913409       --> AGACTTGGTACCTGGAGATGGACATGGCAAAGAGACGGTACTTGGAGCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570407       --> AGACTTGGTACCTGGAGATGAACATGGGAAAGAGACGGTACTTGGAGCTG  Raphanus sativus cv Early Scarlet Globe
EY912857       --> TGACTTGGTACCTGGAGATGAACATGGCAAAGAGACGGTACTTGGAGCTG  Raphanus raphanistrum subsp. raphanistrum (NY)

               1151   -   1201
UN22841        --> AAGAGTTTGTCCTTGAGGATGGTGAGTATCTCACGGCCTTGGTAGGATAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY912133       <-- AAGAGTTTGTCCTTGAGGATGGTGAGTATCTCACGGCCTTGGTAGGATAC
FD574414       <-- AAGAGTTTGTCCTTGAGGATGGTGAGTATCTCACGGC-TTGGTAGGATAC
EY909195       <-- AAGAGTTTGTCCTTGAGGATGGTGAGTATCTCACGGCCTTGGTAGGATAC
FD573623       <-- AAGAGTTTGTCCTTGAGGATGGTGAGTATCTCACGGCCTTGGTAGGATAC
EY916452       --> ..................................................
FD569409       --> ..................................................
EX746220       --> ..................................................
FY432932       --> ..................................................
EY913409       --> AAGAGTTTGTCCTTGAGGATGGTGAGTATCTCACGGCCTTGGTAGGATAC
FD570407       --> AAGAGTTTGTCCTTGAGGATGGTGAGTATCTCACGGC-TTGGTAGGATAC
EY912857       --> AAGAGTTTGTCCTTGAGGATGGTGAGTATCTCACGGCCTTGGTAGGATAC

               1201   -   1251
UN22841        --> TACGATAAGATCTTTGGAGTGGATGAACCAGCTATTATCTCACTTCAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY912133       <-- TACGATAAGATCTTTGGAGTGGATGAACCAGCTATTATCTCACTTCAGTT
FD574414       <-- TACGATAAGATCTTTGGAGTGGATGAACCAGCTATTATCTCACTTCAGTT
EY909195       <-- TACGATAAGATCTTTGGAGTGGATGAACCAGCTATTATCTCACTTCAGTT
FD573623       <-- TACGATAAGATCTTTGGAGTGGATGAACCAGCTATTATCTCACTTCAGTT
EY916452       --> ..................................................
FD569409       --> ..................................................
EX746220       --> ..................................................
FY432932       --> ..................................................
EY913409       --> TACGATAAGATCTTTGGAGTGGATGAACCAGCTATTATCTCACT......
FD570407       --> TACGATAAGATCTTTGGAGTGGATGAACCAGCTATTATCTCACTTCAGTT
EY912857       --> TACGATAAGATCTTTGGAGTGGATGAACCAGCTATTATCTCACTTCAGTT

               1251   -   1301
UN22841        --> CAAGACGAACAAAAGGGAGTCAACTCCGTTTGGAATGGATGCGGGTGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY912133       <-- CAAGACGAACAAAAGGGAGTCAACTCCGTTTGGAATGGATGCGGGTGAGA
FD574414       <-- CAAGACGAACAAAAGGGAGTCAACTCCGTTTGGAATGGATGCGGGTGAGA
EY909195       <-- CAAGACGAACAAAAGGGAGTCAACTCCGTTTGGAATGGATGCGGGTGAGA
FD573623       <-- CAAGACGAACAAAAGGGAGTCAACTCCGTTTGGAATGGATGCGGGTGAGA
EY916452       --> ..................................................
FD569409       --> ..................................................
EX746220       --> ..................................................
FY432932       --> ..................................................
EY913409       --> ..................................................
FD570407       --> CAAGACGAACAAAAGGGAGTCAACTCCGTTTGGAATGGATGCGGGTGAGA
EY912857       --> CAAGACGAACAAAAGGGAGTCAACTCCGTTTGGAATGGATGCGGGTGAGA

               1301   -   1351
UN22841        --> AGTTCACTCTCGGGGAGAATGGCCACAAGATCGTCGGGTTCCACGGGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY912133       <-- AGTTCACTCTCGGGGAGAATGGCCACAAGATCGTCGGGTTCCACGGGAAA
FD574414       <-- AGTTCACTCTCGGGGAGAATGGCCACAAGATCGTCGGGTTCCACGGGAAA
EY909195       <-- AGTTCACTCTCGGGGAGAATGGCCACAAGATCGTCGGGTTCCACGGGAAA
FD573623       <-- AGTTCACTCTCGGGGAGAATGGCCACAAGATCGTCGGGTTCCACGGGAAA
EY916452       --> ..................................................
FD569409       --> ..................................................
EX746220       --> ..................................................
FY432932       --> ..................................................
EY913409       --> ..................................................
FD570407       --> AGTTCACTCTCGGGGAGAATGGCCACAAGATCGTCGGGTTCCACGGGAAA
EY912857       --> AGTTCACTCTCGGGGAGAATGGCCACAAGATCGTCGGGTTCCACGGGAAA

               1351   -   1401
UN22841        --> GCTAGTGATGTCATCCACAGCGTTGGAGTTACTATCGTGCCCATCACCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY912133       <-- GCTAGTGATGTAATCCACAGCGTTGGAGTCACTATCGTGCCCATCACCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD574414       <-- GCTAGTGATGTCATCCACAGCGTTGGAGTTACTATCGTGCCCATCACCGA  Raphanus sativus cv Early Scarlet Globe
EY909195       <-- GCTAGTGATGTAATCCACAGCGTTGGAGTCACTATCGTGCCCATCACCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD573623       <-- GCTAGTGATGTCATCCACAGCGTTGGAGTTACTATCGTGTCCATCACCGA  Raphanus sativus cv Early Scarlet Globe
EY916452       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569409       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX746220       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY432932       --> ..................................................  Raphanus sativus cv GSK3-1
EY913409       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570407       --> GCTAGTGATGTCATCCACAGCGTTGGAGTTACTATCGTGCCCATCACCGA  Raphanus sativus cv Early Scarlet Globe
EY912857       --> GCTAGTGATGTAATCCACAGCGTTGGAGTCACTATCGTGCCCATCACCGA  Raphanus raphanistrum subsp. raphanistrum (NY)

               1401   -   1451
UN22841        --> GTGAAATAAGCCTTCTAATATTTTAATAAACCAGCCAGTCATGTCGGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY912133       <-- GTGAAATAAGCCTTCTACTATCTTAATAAACCAGCCAGTCATGTCGGTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD574414       <-- GTGAAATAAGCCTTTTAATATTTTAATAAACCAGCCAGTCATGTCGGTTG  Raphanus sativus cv Early Scarlet Globe
EY909195       <-- GTGAAATAAGCCTTCTACTATCTTAATAAACCAGCCAGTCATGTCGGTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD573623       <-- GTGAAATAAGCCTTCTAATATTTTAATAAACCAGCCAGTCATGTCGGTTG  Raphanus sativus cv Early Scarlet Globe
EY916452       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569409       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX746220       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY432932       --> ..................................................  Raphanus sativus cv GSK3-1
EY913409       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570407       --> GTGAAATAAGCCTTCTAATATTTTAATAA-CCAGCCAGTCATGTCGGTTG  Raphanus sativus cv Early Scarlet Globe
EY912857       --> GTGAAATAAGCCTTCTACTATct...........................  Raphanus raphanistrum subsp. raphanistrum (NY)

               1451   -   1501
UN22841        --> ATGAATAAAACTTTCAATAAGGCATATGTGTGTGT--TCTTTGTATTTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY912133       <-- AGGAATAAAACTTTCAATAAGGCATGTGTGTGTGTGTTCTTTGTATTTCG
FD574414       <-- ATGAATAAAACTTTCAATAAGGCATATGTGTGTGT--TCTTTGTATTTCG
EY909195       <-- AGGAATAAAACTTTCAATAAGGCATGTGTGTGTGTGTTCTTTGTATTTCG
FD573623       <-- ATGAATAAAACTTTCAATAAGGCATATGTGTGTGT--TCTTTGTATTTCG
EY916452       --> ..................................................
FD569409       --> ..................................................
EX746220       --> ..................................................
FY432932       --> ..................................................
EY913409       --> ..................................................
FD570407       --> ATGAATAAA-CTTTCA-TAA-GCATATGTGTGTGT---CTTTGTATT-CG
EY912857       --> ..................................................

               1501   -   1551
UN22841        --> CTCAATGTGATTTTGTTCCGATAAGCTCCTTTTATCCTCTACTAGATGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY912133       <-- CTCAATGTGATTTTatcc................................
FD574414       <-- CTCAATGTGATTTTGTTCCGATAAGCTCCTTTTATCCTCTACTAGATGAA
EY909195       <-- CTCAATGTGATTTTATCCATATAAGCTCCTTTTCTCC.............
FD573623       <-- CTCAATGTGATTTTGTTCCG..............................
EY916452       --> ..................................................
FD569409       --> ..................................................
EX746220       --> ..................................................
FY432932       --> ..................................................
EY913409       --> ..................................................
FD570407       --> CTCA-TGTGATTT-G-TCCGAT-AGCTCC.....................
EY912857       --> ..................................................

               1551   -   1601
UN22841        --> TGGAGTGAAGAGTTGGAGGGTGCAAATGGTTATATGAGTATCAAATAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY912133       <-- ..................................................
FD574414       <-- TGGAGTGAAGAGTTGGAGGGTGCAAATGGTTATATGAGTATCAAATAGTT
EY909195       <-- ..................................................
FD573623       <-- ..................................................
EY916452       --> ..................................................
FD569409       --> ..................................................
EX746220       --> ..................................................
FY432932       --> ..................................................
EY913409       --> ..................................................
FD570407       --> ..................................................
EY912857       --> ..................................................

               1601   -   1651
UN22841        --> TTGGC
                   ~~~~~
EY912133       <-- .....
FD574414       <-- TTGGC
EY909195       <-- .....
FD573623       <-- .....
EY916452       --> .....
FD569409       --> .....
EX746220       --> .....
FY432932       --> .....
EY913409       --> .....
FD570407       --> .....
EY912857       --> .....