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Alignment for radish unigene UN22858

               1      -     51
UN22858        --> CGAGAAAAAAACCCATCCATTCCAAAACCAAGAACAAGTTTGAATCATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570445       <-- ..................................................
EY941300       <-- ..................................................
EY923946       <-- ..................................................
FD548556       <-- ..................................................
EW724612       <-- ..................................................
FD988955       <-- ..................................................
FD934470       --> CGAGAAAAAAACCCATCCATTCCAAAACCAAGAACAAGTTTGAATCATTT
EY935610       --> ......................CAAAACCAAGAACAAGTTTGAATCATTT
FD984800       --> ......................CAAAACCAAGAACAAGTTTGAATCATTT
FD566759       --> .....................gcgAAACCAAGAACAAGTTTGAATCATTT
EX900014       --> ..................................................
FD544731       --> ........................aaccaattagatcgataataagactt
FD574445       --> ................................agatcgataataagactt
EY936907       --> ..................................................
EW728864       --> ..................................................
EX899931       --> ..................................................

               51     -    101
UN22858        --> GCACAGCTACTCGGAAATATTAAACAGTCTAAAATGCTCCAGAAACAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570445       <-- ..................................................
EY941300       <-- ..................................................
EY923946       <-- ..................................................
FD548556       <-- ..................................................
EW724612       <-- ..................................................
FD988955       <-- ..................................................
FD934470       --> GCACAGCTACTCGGAAATATTAAACAGTCTAAAATGCTCCAGAAACAGCA
EY935610       --> GCACAGCTACTCGGAAATATTAAACAGTCTAAAATGCTCCAGAAACAGCA
FD984800       --> GCACAGCTACTCGGAAATATTAAACAGTCTAAAATGCTCCAGAAACAGCA
FD566759       --> GCACAGCTACTCGGAAATATTAAACAGTCTAAAATGCTCCAGAAACAGCA
EX900014       --> GCACAGCTACTCGGAAATATTAAACAGTCTAAAATGCTCCAGAAACAGCA
FD544731       --> ctgCAGCTACTCGGAAATATTAAACAGTCTAAAATGCTCCAGAAACAGCA
FD574445       --> ctgCAGCTACTCGGAAATATTAAACAGTCTAAAATGCTCCAGAAACAGCA
EY936907       --> ...........................................AACAGCA
EW728864       --> ..................................................
EX899931       --> ..................................................

               101    -    151
UN22858        --> AAACCAAACAAAACGTATGACTAAACTCAGAAAAATAGATGTTTTCGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570445       <-- ..........AAACGTATGACTAA-CTCAGAAAA-TAGATGTTT-CGTTT
EY941300       <-- .............................................tcgTT
EY923946       <-- ..................................................
FD548556       <-- ..................................................
EW724612       <-- ..................................................
FD988955       <-- ..................................................
FD934470       --> AAACCAAACAAAACGTATGACTAAACTCAGAAAAATAGATGTTTTCGTTT
EY935610       --> AAACCAAACAAAACGTATGACTAAACTCAGAAAAATAGATGTTTTCGTTT
FD984800       --> AAACCAAACAAAACGTATGACTAAACTC-GAAAAATAGATGTTTTCGTTT
FD566759       --> AAACCAAACAAAACGTATGACTAAACTCAGAAAAATAGATGTTTTCGTTT
EX900014       --> AAACCAAACAAAACGTATGACTAAACTCAGAAAAATAGATGTTTTCGTTT
FD544731       --> AAACCAAACAAAACGTATGACTAAACTCAGAAAAATAGATGTTTTCGTTT
FD574445       --> AAACCAAACAAAACGTATGACTAAACTCAGAAAAATAGATGTTTTCGTTT
EY936907       --> AAACCAAACAAAACGTATGACTAAACTCAAAAAAATAGATGTTTTCGTTT
EW728864       --> ...CCAAACAAAACGTATGACTAAACTCAGAAAAATAGATGTTTTCGTTT
EX899931       --> ..................................................

               151    -    201
UN22858        --> TACACCTTTCATAGATAGCCTAGATTCACAC--GTGCATGACGGCAAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570445       <-- -ACA-CTTTCATAGATAGC-TAGAT-CACAC--GTGCATGACG-CAAAAG
EY941300       <-- TACAC-TTTCATAGATAGC-TAGAT-CACAC--GTGCATGACGGCAAA-G
EY923946       <-- ..................................................
FD548556       <-- ..................................................
EW724612       <-- ..................................................
FD988955       <-- ..................................................
FD934470       --> TACACCTTTCATAGATAGCCTAGATTCACAC--GTGCATGACGGCAAAAG
EY935610       --> TACACCTTTCATAGATAGCCTAGATTCACAC--GTGCATGACGGCAAAAG
FD984800       --> -ACACCTTTCA-AGATAGCCTAGATTCACACACGTGGATGACGGCAAAAG
FD566759       --> TACACCTTTCATAGATAGCCTAGATTCACAC--GTGCATGACGGCAAAAG
EX900014       --> TACACCTTTCATAGATAGCCTAGATTCACAC--GTGCATGACGGCAAAAG
FD544731       --> TACACCTTTCATAGATAGCCTAGATTCACAC--GTGCATGACGGCAAAAG
FD574445       --> TACACCTTTCATAGATAGCCTAGATTCACAC--GTGCATGACGGCAAAAG
EY936907       --> TACACCTTTCATAAATAGCCTAAATTCACAC--GTGCATGACGGCAAAAG
EW728864       --> TACACCTTTCATAGATAGCCTAGATTCACAC--GTGCATGACGGCAAAAG
EX899931       --> ..................................................

               201    -    251
UN22858        --> ACACGACAATTGAATTGCCAACTGGTCACAAGGGGCTTCACAGACCCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570445       <-- ACACGACAATTGAAT-GCC-ACT-GTCACAAGGG-CTTCACAGACCCTTT
EY941300       <-- GCACGACA-TTGAATTGCCAACTG-TCACAAGGG-CTTCACAGACCCTTT
EY923946       <-- ..................................................
FD548556       <-- ..................................................
EW724612       <-- ..................................................
FD988955       <-- ..................................................
FD934470       --> ACACGACAATTGAATTGCCTACTGGTCACAAGGGGCTTCACAGACCCTTT
EY935610       --> ACACGACAATTGAATTGCCTACTGGTCACAAGGGGCTTCACAGACCCTTT
FD984800       --> ACACGATAATTGAATTGCCAACTGGTCACAA-AGGCTTCACAGACCCTTT
FD566759       --> ACACGACAATTGAATTGCCTACTGGTCACAAGGGGCTTCACAGACCCTTT
EX900014       --> ACACGACAATTGAATTGCCTACTGGTCACAAGGGGCTTCACAGACCCTTT
FD544731       --> ACACGACAATTGAATTGCCAACTGGTCGCAAGGGGCTTCACAGACCCTTT
FD574445       --> ACACGACAATTGAATTGCCAACTGGTCACAAGGGGCTTCACAGACCCTTT
EY936907       --> GCACGACAATTGAATTGCCAACTGGTCACAAGGGGCTTCACAGACCCTTT
EW728864       --> ACACGACAATTGAATTGCCAACTGGTCACAAGGGGCTTCACAGACCCTTT
EX899931       --> ........ATTGAATTGCCTACTGGTCACAAGGGGCTTCACAGACCCTTT

               251    -    301
UN22858        --> AAAGAATCTCCTGCTTTGCCTGACCTAGCATCTGTCCAAGCTTTGGCTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570445       <-- AAAGA-TCT-CTGCTTTGC-TGA-CTAGCATCTGTCCAAGCTTTGGCTAT
EY941300       <-- AAAGAATCTC-TGCTTTGC-TGA-CTAGCATCTGTCCAAGCTTTGGCTAT
EY923946       <-- ............................CATCTGTCCAAGCTTTGGCTAT
FD548556       <-- ............................CATCTGTCCAAGCTTTGGCTAT
EW724612       <-- ..................................................
FD988955       <-- ..................................................
FD934470       --> AAAGAATCTCCAGCTTTGCCTGACCTAGCATCTGTCCAAGCTTTGGCTAT
EY935610       --> AAAGAATCTCCAGCTTTGCCTGACCTAGCATCTGACCAAGCTTTGGCTAT
FD984800       --> AAAGAATCTCCAGCTTTGCCTGACCTAGCATCTGTCCAAGCTTTGGCTAT
FD566759       --> AAAGAATCTCCAGCTTTGCCTGACCTAGCATCTGTCCAAGCTTTGGCTAT
EX900014       --> AAAGAATCTCCAGCTTTGCCTGACCTAGCATCTGTCCAAGCTTTGGCTAT
FD544731       --> AAAGAATCTCCTGCTTTGCCTGACCTAGCATCTGTCCAAGCTTTGGCTAT
FD574445       --> AAAGAATCTCCTGCTTTGCCTGACCTAGCATCTGTCCAAGCTTTGGCTAT
EY936907       --> AAAGAATCTCCTGCTTTGCCTGACCTAGCATCTGTCCAAGCTTTGGCTAT
EW728864       --> AAAGAATCTCCTGCTTTGCCTGACCTAGCATCTGTCCAAGCTTTGGCTAT
EX899931       --> AAAGAATCTCCAGCTTTGCCTGACCTAGCATCTGTCCAAGCTTTGGCTAT

               301    -    351
UN22858        --> CGTCTTCTTCATCTCTTCATCTCCTCCCTCGTACATGTTCTTCATCAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570445       <-- CGTCTTCTTCATCTCTTCATCTCCTCCCTCGTACATGTTCTTCATCAAGT  Raphanus sativus cv Early Scarlet Globe
EY941300       <-- CGTCTTCTTCATCTCTTCATCTCCTCCCTCGTACATGTTCTTCATCAAGT  Raphanus sativus cv Early Scarlet Globe
EY923946       <-- CGTCTTCTTCATCTCTTCATCTCCTCCCTCGTACATGTTCTTCATCAAGT  Raphanus raphanistrum subsp. landra
FD548556       <-- CGTCTTCTTCATCTCTTCATCTCCTCCCTCGTACATGCTCTTCATCAAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724612       <-- .......................CTCCCTCGTACATGTTCTTCATCAAGT  Raphanus sativus cv Early Scarlet Globe
FD988955       <-- ...............................TACATGTTCTTCACCAAGT  Raphanus raphanistrum subsp. landra
FD934470       --> CGTCTTCTTCATCTCTTCATCTCCTCCCTCGTACATGTTCTTTATCAAGT  Raphanus sativus var. oleiformis
EY935610       --> CGTCTTCTTCATCTCTTCATCTCCTCCCTCGTACATGTTCTTTATCAAGT  Raphanus sativus cv Early Scarlet Globe
FD984800       --> CGTCTTCTTCATCTCTTCATCTCCTCCCTCGTACATGTTCTTCACCAAGT  Raphanus raphanistrum subsp. landra
FD566759       --> CGTCTTCTTCATCTCTTCATCTCCTCCCTCGTACATGTTCTTTATCAAGT  Raphanus sativus var. oleiformis
EX900014       --> CGTCTTCTTCATCTCTTCATCTCCTCCCTCGTACATGTTCTTTATCAAGT  Raphanus sativus cv Early Scarlet Globe
FD544731       --> CGTCTTCTTCATCTCTTCATCTCCTCCCTCGTACATGCTCTTCATCAAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD574445       --> CGTCTTCTTCATCTCTTCATCTCCTCCCTCGTACATGTTCTTCATCAAGT  Raphanus sativus cv Early Scarlet Globe
EY936907       --> CGTCTTCTTCATCTCTTCATCTCCTCCCTCGTACATGTTCTTCATCAAGT  Raphanus sativus cv Early Scarlet Globe
EW728864       --> CGTCTTCTTCATCTCTTCATCTCCTCCCTCGTACATGTTCTTCATCAAGT  Raphanus sativus cv Early Scarlet Globe
EX899931       --> CGTCTTCTTCATCTCTTCATCTCCTCCCTCGTACATGTTCTTTATCAAGT  Raphanus sativus cv Early Scarlet Globe

               351    -    401
UN22858        --> CCATGATTCCAGCCATTGGGTCTTTCTCTTTCTCAAGACTAGGTTTGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570445       <-- CCATGATTCCAGCCATTGGGTCTTTCTCTTTCTCAAGACTAGGTTTGATC  Raphanus sativus cv Early Scarlet Globe
EY941300       <-- CCATGATTCCAGCCATTGGGTCTTTCTCTTTCTCAAGACTAGGTTTGATC  Raphanus sativus cv Early Scarlet Globe
EY923946       <-- CCATGATTCCAGCCATTGGGTCTTTCTCTTTCTCAAGACTAGGTTTAATC  Raphanus raphanistrum subsp. landra
FD548556       <-- CCATGATTCCAGCCATTGGGTCTTTCTCTTTCTCAAGACTAGGTTTGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724612       <-- CCATGATTCCAGCCATTGGGTCTTTCTCTTTCTCAAGACTAGGTTTGATC  Raphanus sativus cv Early Scarlet Globe
FD988955       <-- CCATGATTCCAGCCATTGGGTCTTTCTCTTTCTCAAGACTAGGTTTAATC  Raphanus raphanistrum subsp. landra
FD934470       --> CCATGATTCCAGCCATTGGGTCTTTCTCTTTCTCAAGACTAGGTTTAATC  Raphanus sativus var. oleiformis
EY935610       --> CCATGATTCCAGCCATTGGGTCTTTCTCTTTCTCAAGACTAGGTTTAATC  Raphanus sativus cv Early Scarlet Globe
FD984800       --> CCATGATTCCAGCCATTGGGTCTTTCTCTTTCTCAAGACTAGGTTTAATC  Raphanus raphanistrum subsp. landra
FD566759       --> CCATGATTCCAGCCATTGGGTCTTTCTCTTTCTCAAGACTAGGTTTAATC  Raphanus sativus var. oleiformis
EX900014       --> CCATGATTCCAGCCATTGGGTCTTTCTCTTTCTCAAGACTAGGTTTAATC  Raphanus sativus cv Early Scarlet Globe
FD544731       --> CCATGATTCCAGCCATTGGGTCTTTCTCTTTCTCAAGACTAGGTTTGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD574445       --> CCATGATTCCAGCCATTGGGTCTTTCTCTTTCTCAAGACTAGGTTTGATC  Raphanus sativus cv Early Scarlet Globe
EY936907       --> CCATGATTCCAGCCATTGGGTCTTTCTCTTTCTCAAGACTAGGTTTGATC  Raphanus sativus cv Early Scarlet Globe
EW728864       --> CCATGATTCCAGCCATTGGGTCTTTCTCTTTCTCAAGACTAGGTTTGATC  Raphanus sativus cv Early Scarlet Globe
EX899931       --> CCATGATTCCCGCCATTGGGTCTTTCTCTTTCTCAAGACTAGGTTTAATC  Raphanus sativus cv Early Scarlet Globe

               401    -    451
UN22858        --> TTATCTTCTTTGTAGTGAATGTCAATCCAGTTTCCTTTCGAAGACTTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570445       <-- TTATCTTCTTTGTAGTGAATGTCAATCCAGTTTCCTTTCGAAGACTTGAA
EY941300       <-- TTATCTTCTTTGTAGTGAATGTCAATCCAGTTTCCTTTCGAAGACTTGAA
EY923946       <-- TTATCTTCTTTGTAGTGAATGTCCATCCAGTTTCCCCTCGAAGACTTGAA
FD548556       <-- TTATCTTCTTTGTAGTGAATGTCAATCCAGTTTCCTTTCGAAGACTTGAA
EW724612       <-- TTATCTTCTTTGTAGTGAATGTCAATCCAGTTTCCTTTCGAAGACTTGAA
FD988955       <-- TTATCTTCTTTGTAGTGAATGTCCATCCAGTTTCCCCTCGAAGACTTGAA
FD934470       --> TTATCTTCTTTGTAGTGAATGTCAATCCAGTTTCCTTTCGAAGACTTGAA
EY935610       --> TTATCTTCTTTGTAGTGAATGTCAATCCAGTTTCCTTTCGAAGACTTGAA
FD984800       --> TTATCTTCTTTGTAGTGAATGTCCATCCAGTTTCCCCTCGAAGACTTGAA
FD566759       --> TTATCTTCTTTGTAGTGAATGTCAATCCAGTTTCCTTTCGAAGACTTGAA
EX900014       --> TTATCTTCTTTGTAGTGAATGTCAATCCAGTTTCCTTTCGAAGACTTGAA
FD544731       --> TTATCTTCTTTGTAGTGAATGTCAATCCAGTTTCCTTTCGAAGACTTGAA
FD574445       --> TTATCTTCTTTGTAGTGAATGTCAATCCAGTTTCCTTTCGAAGACTTGAA
EY936907       --> TTATCTTCTTTGTAGTGAATGTCAATCCAGTTTCCTTTCGAAGACTTGAA
EW728864       --> TTATCTTCTTTGTAGTGAATGTCAATCCAGTTTCCTTTCGAAGACTTGAA
EX899931       --> TTATCTTCTTTGTAGTGAATGTCAATCCAGTTTCCTTTCGAA........

               451    -    501
UN22858        --> CATTGTGATAACAATCCTCTTAGGCTTTACAAGCACTTTACACTTCTCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570445       <-- CATTGTGATAACAATCCTCTTAGGCTTTACAAGCACTTTACACTTCTCGG
EY941300       <-- CATTGTGATAACAATCCTCTTAGGCTTTACAAGCACTTTACACTTCTCGG
EY923946       <-- CATCGTGATAACAATCCTCTTAGGCTTTACAAGCACTTTACACTTCTCGG
FD548556       <-- CATTGTGATAACAATCCTCTTAGGCTTTACAAGCACTTTACACTTCTCGG
EW724612       <-- CATTGTGATAACAATCCTCTTAGGCTTTACAAGCACTTTACACTTCTCGG
FD988955       <-- CATCGTGATAACAATCCTCTTAGGCTTTACAAGCACTTTACACTTCTCGG
FD934470       --> CATTGTGATAACAATCCTCTTAGGCTTTACAAGCACTTTACACTTCTCGG
EY935610       --> CATTGTGATAACAATCCTCTTAGGCTTTACAAGCACTTTACACTTCTCGG
FD984800       --> CATCGTGATAACAATCCTCTTAGGCTTTACAAGCACTTTACACTTCTCGG
FD566759       --> CATTGTGATAACAATCCTCTTAGGCTTTACAAGCACTTTACACTTCTCGG
EX900014       --> CATTGTGATAACAATCCTCTTAGGCTTTACAAGCACTTTACACTTCTCGG
FD544731       --> CATTGTGATAACAATCCTCTTAGGCTTTACAAGCACTTTACACTTCTCGG
FD574445       --> CATTGTGATAACAATCCTCTTAGGCTTTACAAGCACTTTACACTTCTCGG
EY936907       --> CATTGTGATAACAATCCTCTTAGGCTTTACAAGCACTTTACACTTCTCGG
EW728864       --> CATTGTGATAACAATCCTCTTAGGCTTTACAAGCACTTTACACTTCTCGG
EX899931       --> ..................................................

               501    -    551
UN22858        --> GGACAATCTCTTTGTGCAACTTGGGGATTGCACATCGGTAGTTCTTCCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570445       <-- GGACAATCTCTTTGTGCAACTTGGGGATTGCACATCGGTAGTTCTTCCCT
EY941300       <-- GGACAATCTCTTTGTGCAACTTGGGGATTGCACATCGGTAGTTCTTCCCT
EY923946       <-- GGACAATCTCTTTGTGCAACTTGGGGATTGCACATCGGTAGTTCTTCCCT
FD548556       <-- GGACAATCTCTTTGTGCAACTTGGGGATTGCACATCGGTAGTTCTTCCCT
EW724612       <-- GGACAATCTCTTTGTGCAACTTGGGGATTGCACATCGGTAGTTCTTCCCT
FD988955       <-- GGACAATCTCTTTGTGCAACTTGGGGATTGCACATCGGTAGTTCTTCCCT
FD934470       --> AGACAATCTCTTTGTGCAACTTGGGGATTGCACATCGGTAGTTCTTCCCT
EY935610       --> GGACAATCTCTTTGTGCAACTTGGGGATTGCACATCGGTAGTTCTTCCCT
FD984800       --> GGACAATCTCTTTGTGCAACTTGGGGATTGCACATCGGTAGTTCTTCCCT
FD566759       --> GGACAATCTCTTTGTGCAACTTGGGGATTGCACATCGGTAGTTCTTCCCT
EX900014       --> GGACAATCTCTTTGTGCAACTTGGGGATTGCACATCGGTAGTTCTTCCCT
FD544731       --> GGACAATCTCTTTGTGCAACTTGGGGATTGCACATCGGTAGTTCTTCCCT
FD574445       --> GGACAATCTCTTTGTGCAACTTGGGGATTGCACATCGGTAGTTCTTCCCT
EY936907       --> GGACAATCTCTTTGTGCAACTTGGGGATTGCACATCGGTAGTTCTTCCCT
EW728864       --> GGACAATCTCTTTGTGCAACTTGGGGATTGCACATCGGTAGTTCTTCCCT
EX899931       --> ..................................................

               551    -    601
UN22858        --> TGGACATCATGAATCTTGACATCCAAAGACATCGGCTTGAACTCAGCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570445       <-- TGGACATCATGAATCTTGACATCCAAAGACATCGGCTTGAACTCAGCTTC
EY941300       <-- TGGACATCATGAATCCTGACATCCAAAGACATCGGCTTGAACTCAGCTTC
EY923946       <-- TGGACATCATGGATCTTGACATCCAAAGACATCGGCTTGAACTCAGCTTC
FD548556       <-- TGGACATCATGAATCTTGACATCCAAAGACATCGGCTTGAACTCAGCTTC
EW724612       <-- TGGACATCATGAATCTTGACATCCAAAGACATCGGCTTGAACTCAGCTTC
FD988955       <-- TGGACATCATGGATCTTGACATCCAAAGACATCGGCTTGAACTCAGCTTC
FD934470       --> TGGACATCATGAATCTTGACATCCAAAGACATCGGCTTGAACTCAGCTTC
EY935610       --> TGGACATCATGAATCTTGACATCCAAAGACATCGGCTTGAACTCAGCTTC
FD984800       --> TGGACATCATGGATCTTGACATCCAAAGACATCGGCTTGAACTCAGCTTC
FD566759       --> TGGACATCATGAATCTTGACATCCAAAGACATCGGCTTGAACTCAGCTTC
EX900014       --> TGGACATCATGAATCTTGACATCCAAAGACATCGGCTTGAACTCAGCTTC
FD544731       --> TGGACATCATGAATCTTGACATCCAAAGACATCGGCTTGAACTCAGCTTC
FD574445       --> TGGACATCATGAATCTTGACATCCAAAGACATCGGCTTGAACTCAGCTTC
EY936907       --> TGGACATCATGAATCCTGACATCCAAAGACATCGGCTTGAA.........
EW728864       --> TGGACATCATGAATCTTGACATCCAAAGACATCGGCTTGAACTCAGCTTC
EX899931       --> ..................................................

               601    -    651
UN22858        --> CACCTTGTTTTCATCAACACCTTCCAAAGATATGTACACCTTGACTTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570445       <-- CACCTTGTTTTCATCAACACCTTCCAAAGATATGTACACCTTGACTTTTT
EY941300       <-- CACCTTGTTTTCATCAACACCTTCCAAAGATATGTACACCTTGACTTTTT
EY923946       <-- CACCTTGTATTCATCAACACCTTCCAAAGATATGTACACCTTGACTTTTT
FD548556       <-- CACCTTGTTTTCATCAACACCTTCCAAAGATATGTACGCCTTGACTTTTT
EW724612       <-- CACCTTGTTTTCATCAACACCTTCCAAAGATATGTACACCTTGACTTTTT
FD988955       <-- CACCTTGTATTCATCAACACCTTCCAAAGATATGTACACCTTGACTTTTT
FD934470       --> CACCTTGTTTTCATCAACACCTTCCAAAGATATGTACACCTTGACTTTTT
EY935610       --> CACCTTGTTTTCATCAACACCTTCCAAAGATATGTACACCTTGACTTTTT
FD984800       --> CACCTTGTATTCATCAACACCTTCCAAAGATATGTACACCTTGACTTTTT
FD566759       --> CACCTTGTTTTCATCAACACCTTCCAAAGATATGTACACCTTGACTTTTT
EX900014       --> CACCTTGTTTTCATCAACACCTTCCAAAGATATGTACACCTTGACTTTTT
FD544731       --> CACCTTGTTTTCATCAACACCTTCCAAAGATATGTACGCCTTGACTTTTT
FD574445       --> CACCTTGTTTTCATCAACACCTTCCAAAGATATGTACACCTTGACTTTTT
EY936907       --> ..................................................
EW728864       --> CACCTTGTTTTCATCAACACCTTCCAAAGATATGTACACCTTGACTTTTT
EX899931       --> ..................................................

               651    -    701
UN22858        --> CACTGTCTTGATCCCAGCTGAACGTTCCGAGAGTTACGTAGTTCACTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570445       <-- CACTGTCTTGATCCCAGCTGAACGTTCCGAGAGTTACGTAGTTCACTGCA  Raphanus sativus cv Early Scarlet Globe
EY941300       <-- CACTGTCTTGATCCCAGCTGAACGTTCCGAGAGTTACGTAGTTCACTGCA  Raphanus sativus cv Early Scarlet Globe
EY923946       <-- CATTGTCTTGATCCCAGCTGAACGTTCCGAGAGTTACGTAGTTCAATGCA  Raphanus raphanistrum subsp. landra
FD548556       <-- CACTGTCTTGATCCCAGCTGAACGTTCCGAGAGTTACGTAGTTCACTGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724612       <-- CACTGTCTTGATCCCAGCTGAACGTTCCGAGAGTTACGTAGTTCACTGCA  Raphanus sativus cv Early Scarlet Globe
FD988955       <-- CATTGTCTTGATCCCAGCTGAACGTTCCGAGAGTTACGTAGTTCAATGCA  Raphanus raphanistrum subsp. landra
FD934470       --> ---TGTCTTGATCCCAGCTGAACGTTCCGAGAGTTACGTAGTTCACTGCA  Raphanus sativus var. oleiformis
EY935610       --> CATTGTCTTGATCCCAGATGAACGTTCCGAGAGTTACGTAGTTCACT...  Raphanus sativus cv Early Scarlet Globe
FD984800       --> CATTGTCTTGATCCCAGCTGAACGTTCCGAGAGTTACGTAGTTCAATGCA  Raphanus raphanistrum subsp. landra
FD566759       --> CATTGTCTTGATCCCAGCTGAACGTTCCGAGAGTTACGTAGTTCACTGCA  Raphanus sativus var. oleiformis
EX900014       --> CATTGTCTTGATCCCAGCTGAACGTTCCGAGAGTTACGTAGTTCACTGCA  Raphanus sativus cv Early Scarlet Globe
FD544731       --> CACTGTCTTGATCCCAGCTGAACGTTCCGAGAGTTACGTAGTTCACTGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD574445       --> CACTGTCTTGATCCCAGCTGAACGTTCCGAGAGTTACGTAGTTCACTGCA  Raphanus sativus cv Early Scarlet Globe
EY936907       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW728864       --> CACTGTCTTGATCCCAGCTGAACGTTCCGAGAGTTACGTAGTTCACTGCA  Raphanus sativus cv Early Scarlet Globe
EX899931       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               701    -    751
UN22858        --> GGAGAAACCGGCTTAACCGAAGAAGAAACCGGTGCGGGAACC------GG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570445       <-- GGAGAAACCGGCTTAACCGAAGAAGAAACCGGTGCGGGAACC------GG
EY941300       <-- GGAGAAACCGGCTTAACCGAAGAAGAAACCGGTGCGGGAACC------GG
EY923946       <-- GGAGAAACCGGCTTAACCGAAGAAGAAACCGGTGCGGGAACC------GG
FD548556       <-- GGAGAAACCGGCTTAACCGAAGAAGAAACCGGTGCGGGAACC------AG
EW724612       <-- GGAGAAACCGGCTTAACCGAAGAAGAAACCGGTGCGGGAACC------GG
FD988955       <-- GGAGAAACCGGCTTAACCGAAGAAGAAACCGGTGCGGGAACC------GG
FD934470       --> GGAGAAACCGGCTTAACCGAAGAAGAAACCGGTGCGGGAACCACCGCCGG
EY935610       --> ..................................................
FD984800       --> GGAGAAACCGGCTTAACCGAAGAAGAAACCGGTGCGGGAACC------GG
FD566759       --> GGAGAAACCGGCTTAACCGATGAAGAAACCGGTGCGGGAACCACCGCCGG
EX900014       --> GGAGAAACCGGCTTAACCGAAGAAGAAACCGGTGCGGGAACCaccgccgg
FD544731       --> GGAGAAACCGGCTTAACCGAAGAAGAAACCGGTGCGGGAACC------AG
FD574445       --> GGAGAAACCGGCTTAACCGAAGAAGAAACCGGTGCGGGAACC------GG
EY936907       --> ..................................................
EW728864       --> GGAGAAACCGGCTTAACCGAAGAAGAAACCGGTGCGGGAACC------GG
EX899931       --> ..................................................

               751    -    801
UN22858        --> TTCGACCTCTGGCTTTACATTTGAAGAGCTTGCCGACTGTCTCAGCTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570445       <-- TTCGACCTCTGGCTTTACATTTGAAGAGCTTGCCGACTGTCTCAGCTTCT  Raphanus sativus cv Early Scarlet Globe
EY941300       <-- TTCGACCTCTGGCTTTACATTTGAAGAGCTTGCCGACTGTCTCAGCTTCT  Raphanus sativus cv Early Scarlet Globe
EY923946       <-- TTCGAGCTCTGGCTTTACATTTGAAGCGCTTGTCGACTCTCTCAGCTTCT  Raphanus raphanistrum subsp. landra
FD548556       <-- TTCGACCTCTGGCTTTACATTTGAAGAGCTTGCCGACTGTCTCAGCTTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724612       <-- TTCGACCTCTGGCTTTACATTTGAAGAGCTTGCCGACTGTCTCAGCTTCT  Raphanus sativus cv Early Scarlet Globe
FD988955       <-- TTCGAGCTCTGGCTTTACATTTGAAGCGCTTGCCGACTCTCTCAGCTTCT  Raphanus raphanistrum subsp. landra
FD934470       --> TTCGACCTCTGGCTTTACAATTGAACA-CTTGCCGACTCTCTTAGCTTCT  Raphanus sativus var. oleiformis
EY935610       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD984800       --> TTCGAGCTCTGGCTTTACATTTGAAGCGCTTGCCGACTCTCTCAGCTTCT  Raphanus raphanistrum subsp. landra
FD566759       --> TTCGACCTCTGGCTTTACAATTGAAACACTTGCCGACTCTCTTAGCTTCT  Raphanus sativus var. oleiformis
EX900014       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD544731       --> TTCGACCTCTGGCTTTACATTTGAAGAGCTTGCCGACTGTCTCAGCTTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD574445       --> TTCGACCTCTGGCTTTACATTTGAAGAGCTTGCCGACTGTCTCAGCTTCT  Raphanus sativus cv Early Scarlet Globe
EY936907       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW728864       --> TTCGACCTCTGGCTTTACATTTGAAGAGCTTGCCGACTGTCTCAGCTTCT  Raphanus sativus cv Early Scarlet Globe
EX899931       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               801    -    851
UN22858        --> CCAAATTGCAAATCTCGGAACTGATGAGATTGAGAACACGGGGTCTCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570445       <-- CCAAATTGCAAATCTCGGAACTGATGAGATTGAGAACACGGGGTCTCTTG
EY941300       <-- CCAAATTGCAAATCTCGGAACTGATGAGATTGAGAACACGGGGTCTCTTG
EY923946       <-- CCAAATTGCAAATCTCGGAACTGATGAGATTGAGAACACGGGTTCTCTTG
FD548556       <-- CCAAATTGCAAATCTCGGAACTGATGAGATTGAGAACACGGGGTCTCTTG
EW724612       <-- CCAAATTGCAAATCTCGGAACTGATGAGATTGAGAACACGGGGTCTCTTG
FD988955       <-- CCAAATTGCAAATCTCGGAACTGATGAGATTGA.................
FD934470       --> CCAAATTGCAAATCTCGGA-CTGATGAGAT-GAGAACACGa.........
EY935610       --> ..................................................
FD984800       --> CCAAATTGCAAATCTCGGAACTGATGA.......................
FD566759       --> CCAAATTGCAA-TCTCGGAACTGATGAGAT-GAGAACACGAGTTCTCTTG
EX900014       --> ..................................................
FD544731       --> CCAAATTGCAA-TCTCGGAACTGATGAGAT-GAGAA..............
FD574445       --> CCAAATT...........................................
EY936907       --> ..................................................
EW728864       --> CCAAATTGCAAATCTCGGAACTGATGAGATTGAGAACACGGGGTCTCTTG
EX899931       --> ..................................................

               851    -    901
UN22858        --> GCGATGTTCTGGAGTTGTCTGAGTTCTTCCAAATCAAGCCCGAGTTCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570445       <-- GCGATGTTCTGGAGTTGTCTGAGTTCTTCCAAATCAAGCCCGAGTTCTTC
EY941300       <-- GCGATGTTCTGGAGTTGTCTGAGTTCTTCCAAATCAAGCCCGAGTTCTTC
EY923946       <-- GCGATGTTCTGGAGTTGTCTGAGTTCTTCCAAATCAAGCCCGAc......
FD548556       <-- GCGATGTTCTGGAGTTGTCTGAGTTCTTCCAAATCAAGCCCGAGTTCTTC
EW724612       <-- GCGATGTTCTGGAGTTGTCTGAGTTCTTCCAAATCAAGCCCGAGTTCTTC
FD988955       <-- ..................................................
FD934470       --> ..................................................
EY935610       --> ..................................................
FD984800       --> ..................................................
FD566759       --> GCGA..............................................
EX900014       --> ..................................................
FD544731       --> ..................................................
FD574445       --> ..................................................
EY936907       --> ..................................................
EW728864       --> GCGATGTTCTGGAGTTGTCTGAGTTCTTCCAAATCAAGCCCGAGT.....
EX899931       --> ..................................................

               901    -    951
UN22858        --> AGCCATTGGTATAAATCTCTGAGCAGTCTTTTCAAGCAAACGAAACGTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570445       <-- AGCCATTGGTATAAATCTCTGAGCAGTCTTTTCAAGCAAACGAAACGTTA
EY941300       <-- AGCCATTGGTATAAATCTCTGAGCAGTCTTTTCAAGCAAACGAAACGTTA
EY923946       <-- ..................................................
FD548556       <-- AGCCATTGGCATAAATCTCTGAGCAGTCTTTTCAAGCAAACGAAACGTTA
EW724612       <-- AGCCATTGGTATAAATCTCTGAGCAGTCTTTTCAAGCAAACGAAACGTTA
FD988955       <-- ..................................................
FD934470       --> ..................................................
EY935610       --> ..................................................
FD984800       --> ..................................................
FD566759       --> ..................................................
EX900014       --> ..................................................
FD544731       --> ..................................................
FD574445       --> ..................................................
EY936907       --> ..................................................
EW728864       --> ..................................................
EX899931       --> ..................................................

               951    -   1001
UN22858        --> AGAGTCTGTTCCC
                   ~~~~~~~~~~~~~
FD570445       <-- AGAGTCTGTTCCC
EY941300       <-- AGAGTCTGTTCCC
EY923946       <-- .............
FD548556       <-- AGAGTCTGTTCC.
EW724612       <-- AGAGTCTGTTCCC
FD988955       <-- .............
FD934470       --> .............
EY935610       --> .............
FD984800       --> .............
FD566759       --> .............
EX900014       --> .............
FD544731       --> .............
FD574445       --> .............
EY936907       --> .............
EW728864       --> .............
EX899931       --> .............