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Alignment for radish unigene UN22887

               1      -     51
UN22887        --> GGACAATCGGAGGCAATCGATGCGAAACCGGAGGAATTAGAACCAGTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441923       <-- ..................................................
EV571246       <-- ..................................................
EY935412       <-- ..................................................
FD546460       <-- ..................................................
FD538709       <-- ..................................................
FD550513       --> GGACAATCGGAGGCAATCGATGCGAAACCGGAGGAATTAGAACCAGTTGT
EV566027       --> ..................................................
FD542710       --> ..................................................
EY907347       --> ..................................................

               51     -    101
UN22887        --> AACCGATGCGAAACCGGATGAATTAGAACCAGTTGTAACCGATGCGAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441923       <-- ..................................................
EV571246       <-- ..................................................
EY935412       <-- ..................................................
FD546460       <-- ..................................................
FD538709       <-- ..................................................
FD550513       --> AACCGATGCGAAACCGGATGAATTAGAACCAGTTGTAACCGATGCGAAAC
EV566027       --> ..................................................
FD542710       --> ..................................................
EY907347       --> ..................................................

               101    -    151
UN22887        --> CGGATGAATTAGAACCAGTTGTAATCGACGCGAAGCCGGAGTTAGCACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441923       <-- ..................................................
EV571246       <-- ..................................................
EY935412       <-- ..................................................
FD546460       <-- ..................................................
FD538709       <-- ..................................................
FD550513       --> CGGATGAATTAGAACCAGTTGTAATCGACGCGAAGCCGGAGTTAGCACAT
EV566027       --> ..................................................
FD542710       --> ..................................................
EY907347       --> ..................................................

               151    -    201
UN22887        --> GTGAATCTGTCGCCGGAGGAGAACCAGATCCGATCTACGGAGGCAGATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441923       <-- ..................................................
EV571246       <-- ..................................................
EY935412       <-- ..................................................
FD546460       <-- ..................................................
FD538709       <-- ..................................................
FD550513       --> GTGAATCTGTCGCCGGAGGAGAACCAGATCCGATCTACGGAGGCAGATCA
EV566027       --> ..................................................
FD542710       --> ..................................................
EY907347       --> ..................................................

               201    -    251
UN22887        --> GGGACCGAGCCAGCCGGTAATGAAGAAAGAAGATGAAGGAAACAGGACGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441923       <-- ..................................................
EV571246       <-- ..................................................
EY935412       <-- ..................................................
FD546460       <-- ..................................................
FD538709       <-- ..................................................
FD550513       --> GGGACCGAGCCAGCCGGTAATGAAGAAAGAAGATGAAGGAAACAGGACGT
EV566027       --> ..................................................
FD542710       --> ..................................................
EY907347       --> ..................................................

               251    -    301
UN22887        --> TTACAATGAGAGAGCTTCTCAGCGAACTAAAAAGCGATGAAGGAGATGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441923       <-- ..................................................
EV571246       <-- ..................................................
EY935412       <-- ..................................................
FD546460       <-- ..................................................
FD538709       <-- ..................................................
FD550513       --> TTACAATGAGAGAGCTTCTCAGCGAACTAAAAAGCGATGAAGGAGATGGG
EV566027       --> ..................................................
FD542710       --> ..................................................
EY907347       --> ..................................................

               301    -    351
UN22887        --> ACTCCTCGCAGCACTGTTTCTCCCTATAGCCGAGAGAGTGCTTCCCAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441923       <-- ..................................................
EV571246       <-- ..................................................
EY935412       <-- ..................................................
FD546460       <-- ..................................................
FD538709       <-- ..................................................
FD550513       --> ACTCCTCGCAGCACTGTTTCTCCCTATAGCCGAGAGAGTGCTTCCCAAGC
EV566027       --> ..................................................
FD542710       --> ..................................................
EY907347       --> ..................................................

               351    -    401
UN22887        --> AGCAGAGAACAATCCAGCGATGGGTCTGATTAACAGGATCCAAGTCAACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441923       <-- ..................................................
EV571246       <-- ..................................................
EY935412       <-- ..................................................
FD546460       <-- ..................................................
FD538709       <-- ..................................................
FD550513       --> AGCAGAGAACAATCCAGCGATGGATCTGATTAACAGGATCCAAGTCAACG
EV566027       --> .............gCAGCAATGGGTCTGATTAACAGGATCCAAGTCAACG
FD542710       --> ..................................................
EY907347       --> ..................................................

               401    -    451
UN22887        --> ACGAAGAAGGCCGATCTCGCCAGCGTGTTCTTGCTTTTGCTGCCCGCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441923       <-- ..................................................
EV571246       <-- ..................................................
EY935412       <-- ..................................................
FD546460       <-- ..................................................
FD538709       <-- ..................................................
FD550513       --> ACGAAGAAGGCCGATCTCGCCAGCGTGTTCTTGCTTTTGCTGCCCGCAAG
EV566027       --> ACGAAGAAGGCCGATCTCGCCAGCGTGTTCTTGCTTTTGCTGCCCGCAAG
FD542710       --> ..................................................
EY907347       --> ..................................................

               451    -    501
UN22887        --> TATGCGAGTGCGATTGAGAGAAATCCAGATGATCATGATGCTTTATACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441923       <-- ..................................................
EV571246       <-- ..................................................
EY935412       <-- ..................................................
FD546460       <-- ..................................................
FD538709       <-- ..................................................
FD550513       --> TATGCGAGTGCGATTGAGAGAAATCCAGATGATCATGATGCATTATACAA
EV566027       --> TATGCGAGTGCGATTGAGAGAAATCCAGATGATCATGATGCTTTATACAA
FD542710       --> .....GAGTGCGATTGAGAGAAATCCAGATGATCATGATGCTTTATACAA
EY907347       --> ..................................................

               501    -    551
UN22887        --> CTGGGCACTTATTCTCCAGGAAAGTGCTGATAATGTCAGCCCAGATTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441923       <-- ..................................................
EV571246       <-- ..................................................
EY935412       <-- ..................................................
FD546460       <-- ..................................................
FD538709       <-- ..................................................
FD550513       --> CTGGGCACTTATTCTCCAGGAAAGTGCTGACAATGTCAGCCCAGATTCTG
EV566027       --> CTGGGCACTTATTCTCCAGGAAAGTGCTGATAATGTCAGCCCAGATTCTG
FD542710       --> CTGGGCACTTATTCTCCAGGAAAGTGCTGATAATGTCAGCCCAGATTCTG
EY907347       --> ..................................................

               551    -    601
UN22887        --> TTTCACCCTCTAAGGATGATTTGCTCGAGGAAGCTTGTAAGAAGTACGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441923       <-- ..................................................
EV571246       <-- ..................................................
EY935412       <-- ..................................................
FD546460       <-- ..................................................
FD538709       <-- ..................................................
FD550513       --> TTTCACCCTCTAAGGATGATTTACTCGAGGAAGCTTGTAAGAAGTACGAT
EV566027       --> TTTCACCATCTAAGGATGATTTGCTCGAGGAAGCTTGTAAGAAGTATGAT
FD542710       --> TTTCACCCTCTAAGGATGATTTGCTCGAGGAAGCTTGTAAGAAGTACGAT
EY907347       --> ..................................................

               601    -    651
UN22887        --> GAGGCTACCCGTCTCTGCCCTACCCTCTATGATGCTTACTACAACTGGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441923       <-- ..................................................
EV571246       <-- ..................................................
EY935412       <-- ..................................................
FD546460       <-- ..................................................
FD538709       <-- ..................................................
FD550513       --> GAGGCTACCCGTCTCTGCCCTACTCTCTATGATGCTTACTACAACTGGGC
EV566027       --> GAGGCTACCCGTCTCTGCCCTACCCTCTATGATGCTTACTACAACTGGGC
FD542710       --> GAGGCTACCCGTCTCTGCCCTACCCTCTATGATGCTTACTACAACTGGGC
EY907347       --> ..................................................

               651    -    701
UN22887        --> TATCGCAATCTCTGATAGAGCAAAGATGCGTGGTCGCACCAAGGAAGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441923       <-- ..................................................
EV571246       <-- ..................................................
EY935412       <-- ..................................................
FD546460       <-- ..................................................
FD538709       <-- ..................................................
FD550513       --> TATCGCAATCTCTGATCGAGCAAAGATGCGTGGTCGCACCAAGGAAGC..
EV566027       --> TATCGCAATCTCTGATAGAGCAAAGATGCGTGGTCGCACCAAGGAAGCTG
FD542710       --> TATCGCAATCTCTGATAGAGCAAAGATGCGTGGTCGCACCAAGGAAGCTG
EY907347       --> ..................................................

               701    -    751
UN22887        --> AAGAATTATGGCAACAGGCGACCAATAACTATGAAAAGGCTGTCCAGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441923       <-- ..................................................
EV571246       <-- ..................................................
EY935412       <-- ..................................................
FD546460       <-- ..................................................
FD538709       <-- ..................................................
FD550513       --> ..................................................
EV566027       --> AAGAATTATGGCAACAGGCGACCAATAACTATGAAAAGGCTGTCCAGCTC
FD542710       --> AAGAATTATGGCAACAGGCAACCAATAACTATGAAAAAGCTGTCCAGTTC
EY907347       --> ..................................................

               751    -    801
UN22887        --> AACTGGAACAGTTCCCAGGCTTTAAACAACTGGGGACTGGCGTTGCAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441923       <-- ..................................................
EV571246       <-- ..................................................
EY935412       <-- ..................................................
FD546460       <-- ..................................................
FD538709       <-- ..................................................
FD550513       --> ..................................................
EV566027       --> AACTGGAACAGTTCCCAGGCTTTAAACAACTGGGGACTGGCGTTGCAGGA
FD542710       --> AACTGGAACAGTTCCCAGGCTTTAAACAACTGGGGACTGGCGTTGCAGGA
EY907347       --> ..............................gGGGGACTGGCGTTGCAGGA

               801    -    851
UN22887        --> ACTCAGCCAAATTGTCCCTGCCAGAGAGAAGGAAAAAGTGGTCAGAACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441923       <-- ..............................GGAAAAAGTGGTTAGAACTG
EV571246       <-- ..................................................
EY935412       <-- ..................................................
FD546460       <-- ..................................................
FD538709       <-- ..................................................
FD550513       --> ..................................................
EV566027       --> ACTCAGCCAAATTGTTCCTGCAAGAGAGAAGGAAAAAGTGGTCAGAACTG
FD542710       --> ACTCAGCCAAATTGTCCCTGCCAGAGAGAAGGAAAAAGTGGTCAGAACTG
EY907347       --> ACTCAGCCAAATTGTCCCTGCCAGAGAGAAGGAAAAAGTGGTCAGAACTG

               851    -    901
UN22887        --> CAATTAGCAAGTTTAGGGCGGCAATCAGGTTGCAATTTGATTTCCATCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441923       <-- CAATTAGCAAGTTTAGGGCGGCAATCAGGCTGCAATTTGATTTCCATCGA
EV571246       <-- ..................................................
EY935412       <-- ..................................................
FD546460       <-- ..................................................
FD538709       <-- ..................................................
FD550513       --> ..................................................
EV566027       --> CAATTAGCAAGTTTAGGGCGGCAATCAGGCTGCAATTTGATTTCCATCGA
FD542710       --> CAATTAGCAAGTTTAGGGCGGCAATCAGGTTGCAATTTGATTTCCATCGA
EY907347       --> CAATTAGCAAGTTTAGGGCGGCAATCAGGTTGCAATTTGATTTCCATCGA

               901    -    951
UN22887        --> GCCATATACAACCTTGGAACCGTTCTGTATGGGTTAGCAGAAGACACACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441923       <-- GCCATATACAACCTTGGAACCGTTCTGTATGGGTTAGCAGAAGACACACT
EV571246       <-- ................GAACCGTTCTGTATGGGTTAGCAGAAGACACACT
EY935412       <-- ...........................TATGGGTTAGCAGAAGACACACT
FD546460       <-- ..................................................
FD538709       <-- ..................................................
FD550513       --> ..................................................
EV566027       --> GCCATATACAACCTTGGAACCGTTCTGTATGGGTTAGCAGAAGACACACT
FD542710       --> GCCATATACAACCTTGGAACCGTTCTGTATGGATTAGCAGAAGACACACT
EY907347       --> GCCATATACAACCTTGGAACCGTTCTGTATGGATTAGCAGAAGACACACT

               951    -   1001
UN22887        --> TAGAACGGGGGGTTCAGGAAATGGCAAAGACATTCCTCCGGGTGAGTTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441923       <-- TAGAACGGGGGGTTCAGGAAATGGCAAAGACATTCCTCCGGGTGAGTTAT  Raphanus sativus cv GSK3-1
EV571246       <-- TAGAACGGGGGGTTCAGGAAATGGCAAAGACATTCCTCCGGGTGAGTTAT  Raphanus raphanistrum subsp. landra
EY935412       <-- TAGAACGGGGGGTTCAGGAAATGGCAAAGACATTCCTCCGGGTGAGTTAT  Raphanus sativus cv Early Scarlet Globe
FD546460       <-- ...............AGGAAACGGAAAAGACATTCCTCCGGGTGAGTTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538709       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD550513       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566027       --> TAGAACGGGGGGTTCAGGAAATGGCAAAGACATTCCTCCGGGTGAGTTAT  Raphanus raphanistrum subsp. landra
FD542710       --> TAGAACGGGGGGTTCAGGAAACGGAAAAGACATTCCTCCGGGTGAGTTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907347       --> TAGAACGGGGGGTTCAGGAAACGGAAAAGACATTCCTCCGGGTGAGTTAT  Raphanus raphanistrum subsp. raphanistrum (MS)

               1001   -   1051
UN22887        --> ACAGCCAATCTGCCATCTACATCGCTGCAGCTCATTCGTTGAAGCCAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441923       <-- ACAGCCAATCTGCCATCTACATCGCTGCAGCTCATTCGTTGAAGCCAAGT
EV571246       <-- ATAGCCAATCTGCCATCTACATCGCTGCAGCTCATTCGTTGAAGCCAAGT
EY935412       <-- ACAGCCAATCTGCCATCTACATCGCTGCAGCTCATTCGTTGAAGCCAAGT
FD546460       <-- ACAGCCAATCTGCCATCTACATCGCTGCAGCTCATTCGTTGAAGCCAAGT
FD538709       <-- ...........GCCATCTACATCGCTGCAGCTCATTCGTTGAAGCCAAGT
FD550513       --> ..................................................
EV566027       --> ATAGCCAATCTGCCATCTACATCGCTGCAGCTCATTCGTTGAAGCCAAGT
FD542710       --> ACAGCCAATCTGCCATCTACATCGCTGCAGCTCATTCGTTGAAGCCAAGT
EY907347       --> ACAGCCAATCTGCCATCTACATCGCTGCAGCTCATTCGTTGAAGCCAAGT

               1051   -   1101
UN22887        --> TATTCGGTTTACAGCAGTGCTTTGAGGCTCGTTCGTTCCATGCTACCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441923       <-- TATTCGGTTTACAGCAGCGCTTTGAGGCTCGTTCGTTCCATGCTACCTCT  Raphanus sativus cv GSK3-1
EV571246       <-- TATTCGATTTACAGCAGCGCTTTGAGGCTCGTTCGTTCCATGCTACCTCT  Raphanus raphanistrum subsp. landra
EY935412       <-- TATTCGGTTTACAGCAGCGCTTTGAGGCTCGTTCGTTCCATGCTACCTCT  Raphanus sativus cv Early Scarlet Globe
FD546460       <-- TATTCGGTTTACAGCAGTGCTTTGAGACTCGTTCGTTCCATGCTACCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538709       <-- TATTCGGTTTACAGCAGTGCTTTGAGACTCGTTCGTTCCATGCTACCTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD550513       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566027       --> TATTCGATTTACAGCAGCGCTTTGAGGCTCGTTCGTTCCATGCTACCTCT  Raphanus raphanistrum subsp. landra
FD542710       --> TATTCGGTTTACAGCAGTGCTTTGAGACTCGTTCGTTCCATGCTACCTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907347       --> TATTCGGTTTACAGCAGTGCTTTGAGACTCGTTCGTTCCATGCTACCTCT  Raphanus raphanistrum subsp. raphanistrum (MS)

               1101   -   1151
UN22887        --> TCCGCATCTTAAGGTTGGATATCTGACGGCACCACCCGTGGGAAACTCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441923       <-- ACCGCATCTTAAGGTTGGATATCTGACGGCACCACCCGTGGGAAACTCAC  Raphanus sativus cv GSK3-1
EV571246       <-- ACCGCATCTTAAGGTTGGATATCTGACGGCACCACCCGTGGGAAACTCAC  Raphanus raphanistrum subsp. landra
EY935412       <-- ACCGCATCTTAAGGTTGGATATCTGACGGCACCACCCGTGGGAGACTCAC  Raphanus sativus cv Early Scarlet Globe
FD546460       <-- TCCTCATCTTAAGGTTGGATATCTGACGGCACCACCCGTGGGAAACTCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538709       <-- TCCGCATCTTAAGGTTGGATATCTGACGGCACCACCAGTGGGAAACTCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD550513       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566027       --> ACCGCATCT.........................................  Raphanus raphanistrum subsp. landra
FD542710       --> TCCGCATCTTAAGGTTGGATATCTGACGGCACCACCAGTGGGAAACTCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907347       --> TCCGCACCTTAAGGTTGGATATCTGACGGCACCACCAGTGGGAAACTCAC  Raphanus raphanistrum subsp. raphanistrum (MS)

               1151   -   1201
UN22887        --> TCGCTCCTCACAGTGATTGGAAACGCACGGAGTTTGAACTCAATCACGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441923       <-- TCGCTCCTCACAGTGATTGGAAACGCACGGAGTTTGAACTCAATCACGAG
EV571246       <-- TCGCTCCTCACAGTGATTGGAAACGCACGGAGTTTGAACTCAATCACGAG
EY935412       <-- TCGCTCCTCACAGTGATTGGAAACGCACGGAGTTTGAACTCAATCACGAG
FD546460       <-- TCGCTCCTCACAGTGATTGGAAACGCACGGAGTTTGAACTCAATCACGAG
FD538709       <-- TCGCTCCTCACAGTGATTGGAAACGCACGGAGTTTGAACTCAATCACGAG
FD550513       --> ..................................................
EV566027       --> ..................................................
FD542710       --> TCGCTCCTCACAGTGATGGGAA-CGCACGGAGTTTGA-CTCAATCACGA.
EY907347       --> TCGCTCCTCACAGTGATTGGAAACGCACGGAGTTTGAACTCAATCACGAG

               1201   -   1251
UN22887        --> AGGCTTCTCCAGGTACTGAAACCTGAAGCAAGGGAAATGGGGAGAAACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441923       <-- AGGCTTCTCCAGGTACTGAAACCTGAAGCAAGGGAAATGGGGAGAAACCT
EV571246       <-- AGGCTACTTCAGGTACTGAAACCTGAAGCAAGGGAAATGGGGAGAAACCT
EY935412       <-- AGGCTACTTCAGGTACTGAAACCTGAAGCAAGGGAAATGGGGAGAAACCT
FD546460       <-- AGGCTTCTCCAGGTACTGAAACCTGAAGCAAGAGAAATGGGGAGAAACCT
FD538709       <-- AGGCTTCTCCAGGTACTGAAACCTGAAGCAAGGGAAATGGGGAGAAACCT
FD550513       --> ..................................................
EV566027       --> ..................................................
FD542710       --> ..................................................
EY907347       --> AGGCTTCTCCAGGTACTGAAACCTGAAGCAAGGGAAATGGGGAGAAACCT

               1251   -   1301
UN22887        --> GTCTGGAAAAGCAGAGACAATGAGCACAAACGTGGAGAAGAAGACGGTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441923       <-- GTCTGGAAAAGCAGAGACAATGAGCACAAACGTGGAGAAGAAGACGGTAA
EV571246       <-- GTCTGGAAAAGCA-AGACAATGAGCACAAACGTGGAGAA--GGACGGTAA
EY935412       <-- GTCTGGAAAAGCAGAGACAATGAGCACAAACGTGGAGAAGAGGACGGTAA
FD546460       <-- GTCTGGAAAAGCAGAGACAATGAGCACAAACGTGGAGAAGAAGACGGTAA
FD538709       <-- GTCTGGAAAAGCGGAGACAATGAGCACAAACGTGGAGAAGAAGACGGTAA
FD550513       --> ..................................................
EV566027       --> ..................................................
FD542710       --> ..................................................
EY907347       --> GTCTGGAAAAGCGGAGACAATGAGCACAAACGTGGAGAAGAAGACGGTAA

               1301   -   1351
UN22887        --> AAGTGAACATAACAGAGATAGTGTCAGTGACGACATGTGCTGATCTGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441923       <-- AAGTGAACATAACAGAGATAGTGTCAGTGACGACATGTGCTGATCTGACT
EV571246       <-- AAGTGAACATAACAGAGATAGTGTCAGTGACGACATGTGCTGATCTGACT
EY935412       <-- AAGTGAACATAACAGAGATAGTGTCAGTGACGACATGTGCTGATCTGACT
FD546460       <-- AAGTGAACATAACAGAGATAGTGTCAGTGACGACATGTGCTGATCTGACT
FD538709       <-- AAGTGAACATAACAGAGATAGTGTCAGTGACGACATGTGCTGATCTGACT
FD550513       --> ..................................................
EV566027       --> ..................................................
FD542710       --> ..................................................
EY907347       --> AAGTGAACATAACAGAGATAGTGTCAGTGACGACATGTGCTGATCTGACT

               1351   -   1401
UN22887        --> CTGCCTCCTGGTGCTGGTCTCTGCATTGATACTGTTCATGGCCCAGTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441923       <-- CTGCCTCCTGGTGCTGGTCTCTGCATTGATACTGTTCATGGCCCAGTTTA
EV571246       <-- CTGCCTCCTGGTGCTGGTCTCTGCATTGATACTGTTCATGGCCCAGTTTA
EY935412       <-- CTGCCTCCTGGTGCTGGTCTCTGCATTGATACTGTTCATGGCCCAGTTTA
FD546460       <-- CTGCCTCCTGGTGCTGGTCTCTGCATTGATACCGTTCATGGTCCAGTTTA
FD538709       <-- CTGCCTCCTGGTGCTGGTCTCTGCATTGATACAGTTCATGGCCCAGTTTA
FD550513       --> ..................................................
EV566027       --> ..................................................
FD542710       --> ..................................................
EY907347       --> CTACCTCCTGGTGCTGGTCTCTG...........................

               1401   -   1451
UN22887        --> CTTGGTAGCAGATTCATGGGAGGCGTTGGATGGATGGCTGGATGCGATAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441923       <-- CTTGGTAGCAGATTCATGGGAGGCGTTGGATGGATGGCTGGATGCGATAC
EV571246       <-- CTTGGTAGCAGATTCATGGGAGGCGCTGGATGGATGGCTGGATGCGATAC
EY935412       <-- CTTGGTAGCAGATTCATGGGAGGCGTTGGATGGATGGCTGGATGCGATAC
FD546460       <-- CTTGGTAGCAGATTCATGGGAGGCGTTGGATGGATGGCTGGATGCGATAC
FD538709       <-- CTTGGTAGCAGATTCATGGGAGGCGTTGGATGGATGGCTGGATGCGATAC
FD550513       --> ..................................................
EV566027       --> ..................................................
FD542710       --> ..................................................
EY907347       --> ..................................................

               1451   -   1501
UN22887        --> GTTTGGTGTATACAATTTATGCGAGAGGGAAGAGTGATGTTTTAGCCGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441923       <-- GTTTGGTGTATACAATTTATGCGAGAGGGAAGAGTGATGTTTTAGCCGGT
EV571246       <-- GTTTGGTGTATACAATTTATGCGAGAGGGAAGAGTGATGTTTTAGCCGGT
EY935412       <-- GTTTGGTGTATACAATTTATGCGAGAGGGAAGAGTGATGTTTTAGCCGGT
FD546460       <-- GTTTGGTGTATACGATTTATGCGAGAGGGAAGAGTGATGTTTTAGCCGGT
FD538709       <-- GTTTGGTGTATACGATTTATGCGAGAGGGAAGAGTGATGTTTTAGCCGGT
FD550513       --> ..................................................
EV566027       --> ..................................................
FD542710       --> ..................................................
EY907347       --> ..................................................

               1501   -   1551
UN22887        --> ATTATTACCGCTTAA-TC-A-CACACACTCTTTCTTTCTTTTTCATACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441923       <-- ATTATTACCGCTTAA-TC-A-CACACACACTTTCTTTCTTTTTCATACTT
EV571246       <-- ATTATTGCCGCTTAA-TC-A-CACACAC--TTTCTTTCTTTTTCATACTT
EY935412       <-- ATTATTACCGCTTAA-TC-A-CACACAC--TTTCTTTCTTTTTCATACTT
FD546460       <-- ATTATTACCGCTTAA-TG-AGCACACTTTCTTTCTTTCTTTTTCATACTT
FD538709       <-- ATTATTACCGCTTAACTCTG-CACACTTTCTTTCTTTCTATTTCATACTT
FD550513       --> ..................................................
EV566027       --> ..................................................
FD542710       --> ..................................................
EY907347       --> ..................................................

               1551   -   1601
UN22887        --> GGACTCTCTCCTT--TTTTAAAAATCATATATAGTTTCTATCTTTGTATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441923       <-- GGACTCTCTCCTT--TTTTAAAAATCATATATAGTTTCTATCTTTGTATT
EV571246       <-- GGACTCTCTCCTT--TTTTAAAAATCATATATAGTTTCTATCTTTGTATT
EY935412       <-- GGACTCTCTCCTT--TTTTAAAAATCATATATAGTTTCTATCTTTGTATT
FD546460       <-- GGACTCTCTCCTTGTTTTTAAAAATCATATATAGTTTCTATCTTTGTATT
FD538709       <-- GGACTCTCTACTT--TTT-AAAGGTCATATATAGTTTCTATCTTTGTATT
FD550513       --> ..................................................
EV566027       --> ..................................................
FD542710       --> ..................................................
EY907347       --> ..................................................

               1601   -   1651
UN22887        --> GACAC--CACCATAGCCAGCCAGATGTTTTGATTTTGTTTTTGCATGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441923       <-- GACAC--CACCGTAGCCAGCCAGATGTTTTGATTTTGTTTTTGCATGAAT
EV571246       <-- GACAC--CCCCATAGCCAGCCAGATGTTTTGATTTTGTTTTTGCATGAAT
EY935412       <-- GACAC--CACCATAGCCAGCCAGATGTTTTGATTTTGTTTTTGCATGAAT
FD546460       <-- GACACACCACCATAGCCAGCCAGATGTTTTGATTTTGTT...........
FD538709       <-- GACAC--CACCATAGCCAGCCAGATGTTTTGATTTTGTTTTTGCATGAAT
FD550513       --> ..................................................
EV566027       --> ..................................................
FD542710       --> ..................................................
EY907347       --> ..................................................

               1651   -   1701
UN22887        --> TCTCAATTTAAAACATTTTTCCAGAGAGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY441923       <-- TCTCAATTTAAAACATTTTTCCAGAGAGGCT
EV571246       <-- TCTCGATTTAAAACATTTTTtccg.......
EY935412       <-- TCTCAATTTAAAACATTTTTtcc........
FD546460       <-- ...............................
FD538709       <-- TCTCATTTT......................
FD550513       --> ...............................
EV566027       --> ...............................
FD542710       --> ...............................
EY907347       --> ...............................