Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN22891

               1      -     51
UN22891        --> TTGCTTGCTTCTGGATGCAGAAGTATTACATGGCTTCTTCCAGAGAGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574488       <-- ..................................................
EX760615       <-- ..................................................
EW727571       <-- ..................................................
FD983012       <-- ..................................................
FD570888       --> TTGCTTGCTTCTGGATGCAGAAGTATTACATGGCTTCTTCCAGAGAGCTG
EV570111       --> ..................................................
EX756903       --> ..................................................
FD986843       --> ..................................................

               51     -    101
UN22891        --> GTCCGCATCGTCAGCATCCAGAAGTCTCCTATAATCCATCTCTTCGGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574488       <-- ..................................................
EX760615       <-- ..................................................
EW727571       <-- ..................................................
FD983012       <-- ..................................................
FD570888       --> GTCCGCATCGTCAGCATCCAGAAGTCTCCTATAATCCATCTCTTCGGGGA
EV570111       --> ..................................................
EX756903       --> ..................................................
FD986843       --> ..................................................

               101    -    151
UN22891        --> ATCGATAGCCGGTGCAGCCACGATAAGAGGATTTGGCCAGGAGAAAAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574488       <-- ..................................................
EX760615       <-- ..................................................
EW727571       <-- ..................................................
FD983012       <-- ..................................................
FD570888       --> ATCGATAGCCGGTGCAGCCACGATAAGAGGATTTGGCCAGGAGAAAAGAT
EV570111       --> .................................gGGCCAGGAGAAAAGAT
EX756903       --> ..................................................
FD986843       --> ..................................................

               151    -    201
UN22891        --> TCATCAAGAGGAATCTTTACCTTCTAGACTGTTTTGCTCGGCCTTTCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574488       <-- ..................................................
EX760615       <-- ..................................................
EW727571       <-- ..................................................
FD983012       <-- ..................................................
FD570888       --> TCATCAAGAGGAATCTTTACCTTCTAGACTGTTTTGCTCGGCCTTTCTTC
EV570111       --> TCATCAAGAGGAATCTTTACCTTCTAGACTGTTTCGCTCGGCCTTTCTTT
EX756903       --> ..................................................
FD986843       --> ..................................................

               201    -    251
UN22891        --> TGTAGTATAGCTGCGATAGAGTGGCTTTGTTTGCGCATGGAGTTGCTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574488       <-- ..................................................
EX760615       <-- ..................................................
EW727571       <-- ..................................................
FD983012       <-- ..................................................
FD570888       --> TGCAGTATAGCTGCGATAGAGTGGCTTTGTTTGCGCATGGAGTTGCTTTC
EV570111       --> TGTAGTATAGCTGCGATAGAGTGGCTTTGTTTGCGCATGGAGTTGCTTTC
EX756903       --> ..................................................
FD986843       --> ..................................................

               251    -    301
UN22891        --> CACGCTTGTGTTTGCTTTTTGTATGGTTTTGCTCGTTAGTTTCCCTCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574488       <-- ..................................................
EX760615       <-- ..................................................
EW727571       <-- ..................................................
FD983012       <-- ..................................................
FD570888       --> CACGCTTGTGTTTGCTTTTTGTATGGTTTTGCTCGTTAGTTTCCCTCATG
EV570111       --> CACGCTTGTGTTTGCTTTTTGTATGGTTTTGCTCGTTAGTTTCCCTCATG
EX756903       --> ..................................................
FD986843       --> ..................................................

               301    -    351
UN22891        --> GAACCATTGATCCGAGTATGGCAGGGCTTGCTGTGACATATGGGCTTAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574488       <-- ..................................................
EX760615       <-- ..................................................
EW727571       <-- ..................................................
FD983012       <-- ..................................................
FD570888       --> GAACCATTGATCCGAGTATGGCAGGGCTTGCTGTGACATATGGGCTTAAC
EV570111       --> GAACCATTGATCCGAGTATGGCAGGGCTTGCTGTGACATATGGGCTTAAC
EX756903       --> ..................................................
FD986843       --> ..................................................

               351    -    401
UN22891        --> TTGAACGGGCGTCTATCACGGTGGATACTTAGCTTCTGTAAGCTTGAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574488       <-- ..................................................
EX760615       <-- ..................................................
EW727571       <-- ..................................................
FD983012       <-- ..................................................
FD570888       --> TTGAACGGGCGTCTATCACGGTGGATACTTAGCTTCTGTAAGCTTGAAAA
EV570111       --> TTGAACGGGCGTCTATCACGGTGGATACTTAGCTTCTGTAAGCTTGAAAA
EX756903       --> ..................................................
FD986843       --> ..................................................

               401    -    451
UN22891        --> CAAAATCATCTCGATCGAAAGGATTTATCAGTACAGTCAGCTTTTAGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574488       <-- ..................................................
EX760615       <-- ..................................................
EW727571       <-- ..................................................
FD983012       <-- ..................................................
FD570888       --> CAAAATCATCTCGATCGAAAGGATTTATCAGTACAGTCAGCTTTTAGGAG
EV570111       --> CAAAATCATCTCGATCGAAAGGATTTATCAGTACAGTCAGCTTTTAGGAG
EX756903       --> ..................................................
FD986843       --> ..................................................

               451    -    501
UN22891        --> AATCCCCAGCTGTTATAGAAGATTCCCGACCACCTTCTAACTGGCCTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574488       <-- ..................................................
EX760615       <-- ..................................................
EW727571       <-- ..................................................
FD983012       <-- ..................................................
FD570888       --> AATCCCCAGCTGTTATAGAAGATTCCCGACCACCTTCTAACTGGCCTGAA
EV570111       --> AATCACCAGCTGTTATAGAAGATTCCCGACCACCTTCTAACTGGCCTGAA
EX756903       --> ..................................................
FD986843       --> ..................................................

               501    -    551
UN22891        --> AGAGGAACTATTGAGCTGCTTGATGTTAAGGTTCGTTATGCTGAGAATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574488       <-- ..................................................
EX760615       <-- ..................................................
EW727571       <-- ..................................................
FD983012       <-- ..................................................
FD570888       --> AGAGGAACTATTGAGCTTCTTGATGTTAAGGTTCGTTATGCTGAGAATCT
EV570111       --> AGAGGAACTATTGAGCTGCTTGATGTTAAGGTTCGTTATGCTGAGAATCT
EX756903       --> ...........gGAGCTGCTTGATGTTAAGGTTCGTTATGCTGAGAATCT
FD986843       --> ..................................................

               551    -    601
UN22891        --> TCCGACGGTACTCCACGGGATAAGCTGTGTGTTCCCTGGTGGAAAGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574488       <-- ..................................................
EX760615       <-- ..................................................
EW727571       <-- ..................................................
FD983012       <-- ..................................................
FD570888       --> TCCGACGGTACTCCACGGGATAAGCTGTGTGTTCCCTGGTGGAAAGAAGA
EV570111       --> TCCAACGGTACTCCACGGGATAAGCTGTGTGTTCCCTGGTGGTAAGAAGA
EX756903       --> TCCGACAGTACTCCACGGGATAAGCTGTGTGTTCCCTGGTGGAAAGAAGA
FD986843       --> ..................................................

               601    -    651
UN22891        --> TTGGTATTGTTGGAAGAACGGGAAGCGGGAAATCGACTTTGATTCAAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574488       <-- ...........................GGAAATCGACTTTGATTCAAGCT
EX760615       <-- ..................................................
EW727571       <-- ..................................................
FD983012       <-- ..................................................
FD570888       --> TTGGTATTGTTGGAAGAACGGGAAGCGGGAAATCGACTTTGATTCAAGCT
EV570111       --> TTGGTATTGTTGGAAGAACGGGAAGCGGGAAATCGACTTTGATTCAAGCT
EX756903       --> TTGGTATTGTTGGAAGAACGGGAAGCGGGAAATCGACTTTGACTCAAGCT
FD986843       --> ..................................................

               651    -    701
UN22891        --> TTGTTTCGGCTGATTGAGCCAACTGCTGGAAAGATCACTATAGACAACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574488       <-- TTGTTTCGGCTGATTGAGCCAACTGCTGGAAAGATCACTATAGACAACAT
EX760615       <-- ..................................................
EW727571       <-- ..................................................
FD983012       <-- ..................................................
FD570888       --> TTGTTTCGGTTGATCGAGCCAACTGCTGGAAAGATCACTATAGACAACAT
EV570111       --> TTGTTTCGGCTGATTGAGCCAACTGCTGGAAAGATCACTATAGACAACAT
EX756903       --> TTGTTTCGGCTGATTGAGCCAACTGCTGGAAAGATCACTATAGACAACAT
FD986843       --> ..................................................

               701    -    751
UN22891        --> TGATATCTCTCAGATCGGTCTTCATGATCTCCGTAGTCGCCTTGGTATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574488       <-- TGATATCTCTCAAATCGGTCTTCATGATCTCCGTAGTCGCCTTGGTATCA
EX760615       <-- ..................................................
EW727571       <-- ..................................................
FD983012       <-- ..................................................
FD570888       --> TGATATCTCTCAGAT-GGTCCTCATGATCTCCGTAGTCGCCTTGGc....
EV570111       --> TGATATCTCTCAAATCGGTCTTCATGATCTCCGTAGTCGCCTTGGTATCA
EX756903       --> TGATATCTCTCAGATTGGTCTTCATGATCTCCGTAGTCGCCTTGGTATCA
FD986843       --> ..................................................

               751    -    801
UN22891        --> TACCTCAGGATCCTACATTGTTTGAAGGAACGATCCGTGCGAATCTCGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574488       <-- TACCTCAGGATCCTACATTGTTTGAAGGAACGATCCGTGCGAATCTCGAC
EX760615       <-- ..................................................
EW727571       <-- ..................................................
FD983012       <-- ..................................................
FD570888       --> ..................................................
EV570111       --> TACCTCAGGATCCTACATTGTTTGAAGGAACGATCCGTGCGAATCTCGAC
EX756903       --> TACCTCAGGATCCTACATTGTTTGAAGGAACGATCCGTGCAAATCTTGAC
FD986843       --> ..................................................

               801    -    851
UN22891        --> CCTCTTGAAGAGCATTCAGATGATAAAATCTGGGAGGCGCTTGATAAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574488       <-- CCTCTTGAAGAGCATTCAGATGATAAAATCTGGGAGGCGCTTGATAAGTC
EX760615       <-- .........GAGCATTCAGATGATAAAATCTGGGAGGCGCTTGATAAATC
EW727571       <-- ..................................................
FD983012       <-- ..................................................
FD570888       --> ..................................................
EV570111       --> CCTCTTGAAGAGCATTCAGATGATAAAATCTGGGAGGCGCTTGATAAGTC
EX756903       --> CCTCTTGAAGAGCATTCAGATGATAAAATCTGGGAGGCGCTTGATAAATC
FD986843       --> ..................................................

               851    -    901
UN22891        --> CCAGCTTGGTGACGTTGTTAGAGGAAAAGACTTAAAACTCGACTCTCCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574488       <-- CCAGCTTGGTGACGTTGTTAGAGGAAAAGACTTAAAACTCGACTCTCCAG
EX760615       <-- CCAGCTTGGAGACGTTGTTAGAGGAAAAGACTTAAAACTCGACTCTCCAG
EW727571       <-- ..................................................
FD983012       <-- ..................................................
FD570888       --> ..................................................
EV570111       --> CCAGCTTGGTGACGTTGTTAGAGGAAAAGACTTAAAACTCGACTCTCCAG
EX756903       --> CCAGCTTGGAGACGTTGTTAGAGGAAAAGACTTAAAACTCGACTCTCCAG
FD986843       --> ..................................................

               901    -    951
UN22891        --> TGCTGGAGAATGGAGATAACTGGAGTGTTGGGCAGAGACAGCTAGTGTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574488       <-- TGCTGGAAAATGGAGATAACTGGAGTGTTGGGCAGAGACAGCTAGTGTCG
EX760615       <-- TGCTGGAGAACGGAGATAACTGGGGTGTTGGGCAGAGACAGCTAGTGTCG
EW727571       <-- ..............GATAACTGGAGTGTTATGCAGAGACAGCTAGTGTCG
FD983012       <-- ..................................................
FD570888       --> ..................................................
EV570111       --> TGCTGGAAAATGGAGATAACTGGAGTGTTGGGCAGAGACAGCTAGTGTCG
EX756903       --> TGCTGGAGAACGGAGATAACTGGGGTGTTGGGCAGAGACAGCTAGTGTCG
FD986843       --> ..................................................

               951    -   1001
UN22891        --> CTTGGGAGAGCATTACTTAAACAAGCGAGAATACTTGTTCTTGATGAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574488       <-- CTTGGGAGAGCATTACTTAAACAAGCAAGAATACTTGTTCTTGATGAAGC  Raphanus raphanistrum subsp. landra
EX760615       <-- CTTGGGAGAGCATTACTTAAACAAGCGAGAATACTTGTTCTTGATGAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW727571       <-- CTTGGGAGAGCGTTACTTAAACAAGCGAGAATACTTGTTCTTGATGAAGC  Raphanus sativus cv Early Scarlet Globe
FD983012       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD570888       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV570111       --> CTTGGGAGAGCATTACTTAAACAAGCAAGAATACTTGTctga........  Raphanus raphanistrum subsp. landra
EX756903       --> CTTGGGAGAGCATTACTTAAACAAGCGAGAATACTTGTTCTTGATGAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD986843       --> ................gTAAACAAGCAAGAATACTTGTTCTTGATGAAGC  Raphanus raphanistrum subsp. landra

               1001   -   1051
UN22891        --> AACAGCATCGGTAGACACAGCAACAGACAATTTAATCCAGAAGATTATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574488       <-- AACAGCATCGGTAGACACAGCAACAGACAATTTAATCCAGAAGATTATCA
EX760615       <-- AACAGCATCGGTAGACACAGCAACAGACAATTTAATCCAGAAGATTATCA
EW727571       <-- AACGGCATCGGTAGACACGGCAACAGACAATTTGATCCAGAAGATTATCA
FD983012       <-- .............GACACAGCAACAGACAATTTAATCCAGAAGATTATCA
FD570888       --> ..................................................
EV570111       --> ..................................................
EX756903       --> AACAGCATCGGTAGACACAGCAACAGACAATTTAATCCAGAAGATTATCA
FD986843       --> AACAGCATCGGTAGACACAGCAACAGACAATTTAATCCAGAAGATTATCA

               1051   -   1101
UN22891        --> GAACTGAGTTTCAAGACTGCACAGTCTGCACCATTGCTCACCGGATCCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574488       <-- GAACTGAGTTTCAAGACTGCACAGTCTGCACCATTGCTCACCGGATCCCA
EX760615       <-- GAACTGAGTTTCAAGACTGCACAGTTTGCACCATTGCTCACCGGATCCCA
EW727571       <-- GAACTGAGTTTCAAGACTGCACAGTCTGCACCATTGCTCACCGGATCCCA
FD983012       <-- GAACTGAGTTTCAGGACTGCACAGTCTGCACCATTGCTCACCGGATCCCA
FD570888       --> ..................................................
EV570111       --> ..................................................
EX756903       --> GAACTGAGTTTCAAGACTGCACAGTCTGCACCATTGCTCACCGGATCCCA
FD986843       --> GAACTGAGTTTCAGGACTGCACAGTCTGCACCATTGCTCACCGGATCCCA

               1101   -   1151
UN22891        --> ACTGTTATCGACAGTGACCTTGTTTTGGTTCTCAGCGACGGTAGAGTAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574488       <-- ACTGTTATCGACAGTGACCTTGTTTTGGTTCTCAGCGACGGTAGAGTAGC
EX760615       <-- ACTGTTATCGACAGTGACCTTGTTTTGGTTTTCAGCGACGGTAGAGTAGC
EW727571       <-- ACTGTTATCGACAGTGACCTTGTTTTGGTTTTCAGCGACGGTAGAGTAGC
FD983012       <-- ACTGTTATCGACAGTGACCTTGTTTTGGTTCTCAGCGACGGTAGAGTAGC
FD570888       --> ..................................................
EV570111       --> ..................................................
EX756903       --> ACTGTTATCGACAGTGACCTTGTTTTGGTTCTCAGC..............
FD986843       --> ACTGTTATCGACAGTGACCTTGTTTTGGTTCTCAGCGACGGTAGAGTAGC

               1151   -   1201
UN22891        --> AGAGTTTGATACTCCTGCACGGCTCTTAGAAGACAAATCATCCATGTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574488       <-- AGAGTTTGATACTCCTGCACGGCTCTTAGAAGACAAATCATCCATGTTCT
EX760615       <-- AGAGTTTGATACTCCTGCACGGCTCTTAGAAGACAAATCATCCATGTTCT
EW727571       <-- AGAGTTTGATACTCCTGCACGGCTCTTAGAAGACAAATCATCCATGTTCT
FD983012       <-- AGAGTTTGATACTCCTGCACGGCTCTTAGAAGACAAATCATCCATGTTCT
FD570888       --> ..................................................
EV570111       --> ..................................................
EX756903       --> ..................................................
FD986843       --> AGAGTTTGATACTCCTGCACGGCTCTTAGAAGACAAATCATCCATGTTCT

               1201   -   1251
UN22891        --> TAAAACTTGTGAGCGAATACTCCTCAAGATCTAGTGGGATGCCTGACTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574488       <-- TAAAACTTGTGAGCGAATAC---TCAAGATCTAGTGGGATGCCTGACTTG
EX760615       <-- TAAAACTTGTGAGCGAATACTCCTCAAGATCTAGTGGGATGCCTGACTTG
EW727571       <-- TAAAACTTGTGAGCGAATACTCCTC.........................
FD983012       <-- TAAAACTTGTGAGCGAATACTCCTCAAGATCTAGTGGGATGCCTGACTTG
FD570888       --> ..................................................
EV570111       --> ..................................................
EX756903       --> ..................................................
FD986843       --> TAAAACTTGTGAGCGAATACTCCTCAAGATCTAGTGGGATGCCTGACTTG

               1251   -   1301
UN22891        --> TGATCATTCATGTTAAAAAATTTGAGGTTAGGGGTTTTTGTTTCTCAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574488       <-- TGATCATTCATGTTAAAAAATTTGAGGTTAGGGGTTTTTGTTTCTCAAGA
EX760615       <-- TGATCATTCATGTTAAAA--ATTGAGGTTAGGGATTTT-GTTTCTCAAGA
EW727571       <-- ..................................................
FD983012       <-- TGATCATTCATGTTAAAAAATTTGAGGTTAGGGGTTTTTGTTTCTCAAGA
FD570888       --> ..................................................
EV570111       --> ..................................................
EX756903       --> ..................................................
FD986843       --> TGATCATTCATGTTAAAAAATTTGAGGTTAGGGGTTTTTGTTTCTCAAGA

               1301   -   1351
UN22891        --> GAAACATAAAAAAACTGAAAAATGTGACAAAGCTTAAAGTCTCTAAGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574488       <-- GAAACATAAAAAAACTGAAAAATGTGACAAAGCTTAAAGTCTCTAGGCAA
EX760615       <-- GAAACATAAAAAAACTGAAAAATGTGACAAAGCTTAAAGTCTCTAAGCAA
EW727571       <-- ..................................................
FD983012       <-- GAAACATAAAAAAACTGAAAAATGTGACAAAGCTTAAAGTCTCTAAGCAA
FD570888       --> ..................................................
EV570111       --> ..................................................
EX756903       --> ..................................................
FD986843       --> GAAACATAAAAAAACTGAAAAATGTGACAAAGCTTAAAGTCTCTAAGCAA

               1351   -   1401
UN22891        --> GATAGAAAGTTCCACTGGGTAGAAGAAAGAAAAAAAAGAATGACATGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574488       <-- GATAGAAAGTTCCACTGGGTAGAAGAAAGAAAAAAAAGAATGACATGATG
EX760615       <-- GATAGAGAGTTCCACTGGGTAGAAGAAAGAAAAA--AGAATGACATGATG
EW727571       <-- ..................................................
FD983012       <-- GATAGAAAGTTCCACTGGGTAGAAGAAAGAAAAAAAAGAATGACATGATG
FD570888       --> ..................................................
EV570111       --> ..................................................
EX756903       --> ..................................................
FD986843       --> GATAGAAAGTTCCACTGGGTAGAAGAAAGAAAAAAAAGAATGACATGATG

               1401   -   1451
UN22891        --> CAGTCGTCGTGCTCATATTATACTTTTAAAGCCACTCTTTTGAACATTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574488       <-- CAGTCGTCGTGCTCATATTATACTTTTAAAGCCACTCTTTTGAACATTGA
EX760615       <-- CAGTCTTCGTGCTCATATTATACTTTTAAAGCCACTCTTTTGAACATTGA
EW727571       <-- ..................................................
FD983012       <-- CAGTCGTCGTGCTCATATTATACTTTTAAAGCCACTCTTTTGAACATTGA
FD570888       --> ..................................................
EV570111       --> ..................................................
EX756903       --> ..................................................
FD986843       --> CAGTCGTCGTGCTCATATTATACTTTTAAAGCCACTCTTTTGAACATTGA

               1451   -   1501
UN22891        --> AAGAGACCTTTTTTGTAAGGAACAAAGCTTCTGTGGTGATCTTTTTAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574488       <-- AAGAGACCTTTTTTGTAAGGAACAAAGCTTCTGTGGTGATCTTTTTAAAT
EX760615       <-- AAGAGACCTTTTT-GTAAGGAACGAAGCTTCTGTGGTGATCTTTTTAAAT
EW727571       <-- ..................................................
FD983012       <-- AAGAGACCTTTTTTGTAAGGAACAAAGCTTCTGTGGTGATCTTTTTAAAT
FD570888       --> ..................................................
EV570111       --> ..................................................
EX756903       --> ..................................................
FD986843       --> AAGAGACCTTTTTTGTAAGGAACAAAGCTTCTGTGGTGATCTTTTTAAAT

               1501   -   1551
UN22891        --> GTTATTTGATAATCTGCAAAAACAGTTCTTTTTTGCCGTTTAGAAAATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574488       <-- GTTATTTGATAATCTGCAAAAACAGTTCTTTT..................
EX760615       <-- GTTATTTGATAATCTGCAAAAACAGTTCTTTTTTGCCGTTTAGAAAATGA
EW727571       <-- ..................................................
FD983012       <-- GTTATTTGATAATCTGC.................................
FD570888       --> ..................................................
EV570111       --> ..................................................
EX756903       --> ..................................................
FD986843       --> GTTATTTGATAATCTGC.................................

               1551   -   1601
UN22891        --> TTATTATTAATTATTGTGTAATATAAATCACACCATGAATGTTACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574488       <-- ..............................................
EX760615       <-- TTATTATTAATTATTGTGTAATATAAATCACACCATGAATGTTACG
EW727571       <-- ..............................................
FD983012       <-- ..............................................
FD570888       --> ..............................................
EV570111       --> ..............................................
EX756903       --> ..............................................
FD986843       --> ..............................................