RadishBase

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Alignment for radish unigene UN22897

               1      -     51
UN22897        --> AGGGGACAACGGACAAATCAAAACCCCAATAGGAAAAAAAGAAGAAACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532992       <-- ..................................................
EV531080       <-- ..................................................
FD975084       <-- ..................................................
EX753074       <-- ..................................................
EY894577       <-- ..................................................
EY903994       <-- ..................................................
EV532030       <-- ..................................................
EY893872       <-- ..................................................
EV532037       <-- ..................................................
EY894757       <-- ..................................................
FD976594       <-- ..................................................
EY916596       --> AGGGGACAACTCACAAATCAAAACCCCAATAGGAAAAAAAGAAGAAACTC
FD532490       --> ...GGACAACTCACAAATCAAAACCCCAATAGGAAAAAAAGAAGAAACTC
EV526658       --> ..........GGACAAATCAAAACCCCAATAGGAAAAAAAGAAGAAACTC
EV527910       --> ..........GGACAAATCAAAACCCCAATAGGAAAAAAAGAAGAAACTC
EV527922       --> ..........GGACAAATCAAAACCCCAATAGGAAAAAAAGAAGAAACTC
EV529185       --> ..........GGACAAATCAAAACCCCAATAGGAAAAAAAGAAGAAACTC
EX748727       --> ..........GGACAAATCAAAACCCCAATAGGAAAAAAAGAAGAAACTC
EX749365       --> ..........GGACAAATCAAAACCCCAATAGGAAAAAAAGAAGAAACTC
EY897604       --> ..........GGACAAATCAAAACCCCAATAGGAAAAAAAGAAGAAACTC
EY898547       --> ..........GGACAAATCAAAACCCCAATAGGAAAAAAAGAAGAAACTC
EY898811       --> ..........GGACAAATCAAAACCCCAATAGGAAAAAAAGAAGAAACTC
FD560683       --> ..........GGACAAATCAAAACCCCAATAGGAAAAAA-GAAGAAACTC
FD560828       --> ..........GGACAGATCAAAACCCCAATAGGAAAAAAAGAAGAAACTC
FD949761       --> ..........GGACAAATCAAAACCCCAATAGGAAAAAAAGAAGAAACTC
FY437498       --> ..................................................
EW723566       --> ..................................................
EY906519       --> ..................................................
FD980749       --> ..................................................
FD978927       --> ..................................................
EV535107       --> ..................................................

               51     -    101
UN22897        --> ATAAATCTCTGAAAATGGCAAACAGTTACTTACTTCCTCTGTTTCTTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532992       <-- ..................................................
EV531080       <-- ..................................................
FD975084       <-- ..................................................
EX753074       <-- ..................................................
EY894577       <-- ..................................................
EY903994       <-- ..................................................
EV532030       <-- ..................................................
EY893872       <-- ..................................................
EV532037       <-- ..................................................
EY894757       <-- ..................................................
FD976594       <-- ..................................................
EY916596       --> ATAAATCTCTGAAAATGGCAAACAGTTACTTACTTCCTCTGTTTCTTTCT
FD532490       --> ATAAATCTCTGAAGATGGCAAACAGTTACTTACTTCCTCTGTTTCTTTCT
EV526658       --> ATAAATCTCTGAAAATGGCAAACAGTTACTTACTTCCTCTGTTTCTTTCT
EV527910       --> ATAAATCTCTGAAAATGGCAAACAGTTACTTACTTCCTCTGTTTCTTTCT
EV527922       --> ATAAATCTCTGAAAATGGCAAACAGTTACTTACTTCCTCTGTTTCTTTCT
EV529185       --> ATAAATCTCTGAAAATGGCAAACAGTTACTTACTTCCTCTGTTTCTTTCT
EX748727       --> ATAAATCTCTGAAAATGGCAAACAGTTACTTACTTCCTCTGTTTCTTTCT
EX749365       --> ATAAATCTCTGAAAATGGCAAACAGTTACTTACTTCCTCTGTTTCTTTCT
EY897604       --> ATAAATCTCTGAAAATGGCAAACAGTTACTTACTTCCTCTGTTTCTTTCT
EY898547       --> ATAAATCTCTGAAAATGGCAAACAGTTACTTACTTCCTCTGTTTCTTTCT
EY898811       --> ATAAATCTCTGAAAATGGCAAACAGTTACTTACTTCCTCTGTTTCTTTCT
FD560683       --> ATAAATCTCTGAAAATGGCAAACAGTTACTTACTTCCTCTGTTTCTTTCT
FD560828       --> ATAAATCTCTGAAAATGGCAAACAGTTACTTACTTCCTCTGTTTCTTTCT
FD949761       --> ATAAATCTCTGAAAATGGCAAACAGTTACTTACTTCCTCTGTTTCTTTCT
FY437498       --> ....ATCTCTGAAA-TGGCAAACAGTTACTTACTTCCTCTGTTTCTTTCT
EW723566       --> ..................................................
EY906519       --> ..................................................
FD980749       --> ..................................................
FD978927       --> ..................................................
EV535107       --> ..................................................

               101    -    151
UN22897        --> CTTATCGTCATCTCCTCTGTTTCAGCTAACTTCCAAAGAGACGTAGAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532992       <-- ................................CCAAAGAGACGTAGAGAT
EV531080       <-- .....................................gatACGTAGAGAT
FD975084       <-- ..................................................
EX753074       <-- ..................................................
EY894577       <-- ..................................................
EY903994       <-- ..................................................
EV532030       <-- ..................................................
EY893872       <-- ..................................................
EV532037       <-- ..................................................
EY894757       <-- ..................................................
FD976594       <-- ..................................................
EY916596       --> CTTATCGTCATCTCCTCTGTTTCAGCTAACTTCCAAAGAGACGTAGAGAT
FD532490       --> CTTATCGTCATCTCCTCTGTTTCAGCTAACTTCCAAAGAGACGTAGAGAT
EV526658       --> CTTATCGTCATCTCCTCTGTTTCAGCCAACTTCCAAAGATACGTAGAGAT
EV527910       --> CTTATCGTCATCTCCTCTGTTTCAGCTAACTTCCAAAGAGACGTAGAGAT
EV527922       --> CTTATCGTCATCTCCTCTGTTTCAGCTAACTTCCAAAGAGACGTAGAGAT
EV529185       --> CTTATCGTCATCTCCTCTGTTTCAGCTAACTTCCAAAGAGACGTAGAGAT
EX748727       --> CTTATCGTCATCTCCTCTGTTTCAGCTAACTTCCAAAGAGACGTAGAGAT
EX749365       --> CTTATCGTCATCTCCTCTGTTTCAGCTAACTTCCAAAGAGACGTAGAGAT
EY897604       --> CTTATCGTCATCTCCTCTGTTTCAGCTAACTTCCAAAGAGACGTAGAGAT
EY898547       --> CTTATCGTCATCTCCTCTGTTTCAGCTAACTTCCAAAGAGACGTAGAGAT
EY898811       --> CTTATCGTCATCTCCTCTGTTTCAGCTAACTTCCAAAGAGACGTAGAGAT
FD560683       --> CTTATCGTCATCTCCTCTGTTTCAGCTAACTTCCAAAGAGACGTAGAGAT
FD560828       --> CTTATCGTCATCTCCTCTGTTTCAGCTAACTTCCAAAGAGACGTAGAGAT
FD949761       --> CTTATCGTCATCTCCTCTGTTTCAGCTAACTTCCAAAGAGACGTAGAGAC
FY437498       --> CTTATCGTCATCTCCTCTGTTTCAGCTAACTTCCAAAGAGACGTAGAGAT
EW723566       --> ...............................................GAT
EY906519       --> ..................................................
FD980749       --> ..................................................
FD978927       --> ..................................................
EV535107       --> ..................................................

               151    -    201
UN22897        --> CACATGGGGAGATGGACGTGGACAGATCACGAACAATGGAGAGCTTCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532992       <-- CACATGGGGAGATGGACGTGGACAGATCACGAACAATGGAGAGCTTCTCA
EV531080       <-- CACATGGGGAGATGGACGTGGACAGATCACGAACAATGGAGAGCTTCTCA
FD975084       <-- ..................................................
EX753074       <-- ..................................................
EY894577       <-- ..................................................
EY903994       <-- ..................................................
EV532030       <-- ..................................................
EY893872       <-- ..................................................
EV532037       <-- ..................................................
EY894757       <-- ..................................................
FD976594       <-- ..................................................
EY916596       --> CACATGGGGAGATGGACGTGGACAGATCACGAACAATGGAGAGCTTCTCA
FD532490       --> CACATGGGGAGATGGACGTGGACAGATCACGAACAATGGAGAGCTTCTCA
EV526658       --> CACATGGGGAGATGGACGTGGACAGATCACGAACAATGGAGAGCTTCTCA
EV527910       --> CACATGGGGAGATGGACGTGGACAGATCACGAACAATGGAGAGCTTCTCA
EV527922       --> CACATGGGGAGATGGACGTGGACAGATCACGAACAATGGAGAGCTTCTCA
EV529185       --> CACATGGGGAGATGGACGTGGACAGATCACGAACAATGGAGAGCTTCTCA
EX748727       --> CACATGGGGAGATGGACGTGGACAGATCACGAACAATGGAGAGCTTCTCA
EX749365       --> CACATGGGGAGATGGACGTGGACAGATCACGAACAATGGAGAGCTTCTCA
EY897604       --> CACATGGGGAGATGGACGTGGACAGATCACGAACAATGGAGAGCTTCTCA
EY898547       --> CACATGGGGAGATGGACGTGGACAGATCACGAACAATGGAGAGCTTCTCA
EY898811       --> CACATGGGGAGATGGACGTGGACAGATCACGAACAATGGAGAGCTTCTCA
FD560683       --> CACATGGGGAGATGGACGTGGACAGATCACGAACAATGGAGAGCTTCTCA
FD560828       --> CACATGGGGAGATGGACGTGGACAGATCACGAACAATGGAGAGCTTCTCA
FD949761       --> CACATGGGGAGATGGACGTGGACAGATCACGAACAATGGAGAGCTTCTCA
FY437498       --> CACATGGGGAGATGGACGTGGACAGATCACGAACAATGGAGAGCTTCTCA
EW723566       --> CACATGGGGAGATGGACGTGGACAGATCACGAACAATGGAGAGCTTCTCA
EY906519       --> ............................ggGAACAATGGAGAGCTTCTCA
FD980749       --> ....................................TGGAGAGCTTCTCA
FD978927       --> ..................................................
EV535107       --> ..................................................

               201    -    251
UN22897        --> CTTTATCTCTAGACAAATCCTCTGGCTCTGGCTTTCAATCCAAGAACGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532992       <-- CTTTATCTCTAGACAAATCCTCTGGCTCTGGCTTTCAATCCAAGAACGAG
EV531080       <-- CTTTATCTCTAGACAAATCCTCTGGCTCTGGCTTTCAATCCAAGAACGAG
FD975084       <-- ...................gctctGCTCT-GCTTTCAATCCAAGAACGAG
EX753074       <-- .............................tGCTTTCAATCCAAGAACGAG
EY894577       <-- ..................................................
EY903994       <-- ..................................................
EV532030       <-- ..................................................
EY893872       <-- ..................................................
EV532037       <-- ..................................................
EY894757       <-- ..................................................
FD976594       <-- ..................................................
EY916596       --> CTTTATCTCTAGACAAATCCTCTGGCTCTGGCTTTCAATCCAAGAACGA-
FD532490       --> CTTTATCTCTAGACAAATCCTCTGGCTCTGGCTTTCAATCCAAGAACGAG
EV526658       --> CTTTATCTCTAGACAAATCCTCTGGCTCTGGCTTTCAATCCAAGAACGAG
EV527910       --> CTTTATCTCTAGACAAATCCTCTGGCTCTGGCTTTCAATCCAAGAACGAG
EV527922       --> CTTTATCTCTAGACAAATCCTCTGGCTCTGGCTTTCAATCCAAGAACGAG
EV529185       --> CTTTATCTCTAGACAAATCCTCTGGCTCTGGCTTTCAATCCAAGAACGAG
EX748727       --> CTTTATCTCTAGACAAATCCTCTGGCTCTGGCTTTCAATCCAAGAACGAG
EX749365       --> CTTTATCTCTAGACAAATCCTCTGGCTCTGGCTTTCAATCCAAGAACGAG
EY897604       --> CTTTATCTCTAGACAAATCCTCTGGCTCTGGCTTTCAATCCAAGAACGAG
EY898547       --> CTTTATCTCTAGACAAATCCTCTGGCTCTGGCTTTCAATCCAAGAACGAG
EY898811       --> CTTTATCTCTAGACAAATCCTCTGGCTCTGGCTTTCAATCCAAGAACGAG
FD560683       --> CTTTATCTCTAGACAAATCCTCTGGCTCTGGCTTTCAATCCAAGAACGAG
FD560828       --> CTTTATCTCTAGACAAATCCTCTGGCTCTGGCTTTCAATCCAAGAACGAG
FD949761       --> CTTTATCTCTAGACAAATCCTCTGGCTCTGGCTTTCAATCCAAGAACGAG
FY437498       --> CTTTATCTCTAGACAAATCCTCTGGCTCTGGCTTTCAATCCAAGAACGAG
EW723566       --> CTTTATCTCTAGACAAATCCTCTGGCTCTGGCTTTCAATCCAAGAACGAG
EY906519       --> CTTTATCTCTAGACAAATCCTCTGGCTCTGGCTTTCAATCCAAGAACGAG
FD980749       --> CTTTATCTCTAGACAAATCCTCTGGCTCTGGCTTTCAATCCGAGAACGAG
FD978927       --> ..................gCTCTGGCTCTGGCTTTCAATCCAAGAACGAG
EV535107       --> ..................................................

               251    -    301
UN22897        --> TACTTGTTCGGTAAAATCGACATGCAAATGAAACTCGTCCCTGGAAACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532992       <-- TACTTGTTCGGTAAAATCGACATGCAAATGAAACTCGTCCCTGGAAACTC
EV531080       <-- TACTTGTTCGGTAAAATCGACATGCAAATGAAACTCGTCCCTGGAAACTC
FD975084       <-- TACTTGTTCGGTAAAATCGACATGCAAATGAAACTCGTCCCTGGAAACTC
EX753074       <-- TACTTGTTCGGTAAA-TCGACATGCAAATGAAACTCGTCCATGGAAACTC
EY894577       <-- ..................................................
EY903994       <-- ..................................................
EV532030       <-- ..................................................
EY893872       <-- ..................................................
EV532037       <-- ..................................................
EY894757       <-- ..................................................
FD976594       <-- ..................................................
EY916596       --> TACTT.............................................
FD532490       --> TACTTGTTCGGTAAAATCGACATGCAAATGAAACTCGTCCCTGGAAACTC
EV526658       --> TACTTGTTCGGTAAAATCGACATGCAAATGAAACTCGTCCCTGGAAACTC
EV527910       --> TACTTGTTCGGTAAAATCGACATGCAAATGAAACTCGTCCCTGGAAACTC
EV527922       --> TACTTGTTCGGTAAAATCGACATGCAAATGAAACTCGTCCCTGGAAACTC
EV529185       --> TACTTGTTCGGTAAAATCGACATGCAAATGAAACTCGTCCCTGGAAACTC
EX748727       --> TACTTGTTCGGTAAAATCGACATGCAAATGAAACTCGTCCCTGGAAACTC
EX749365       --> TACTTGTTCGGTAAAATCGACATGCAAATGAAACTCGTCCATGGAAACTC
EY897604       --> TACTTGTTCGGTAAAATCGACATGCAAATGAAACTCGTCCCTGGAAACTC
EY898547       --> TACTTGTTCGGTAAAATCGACATGCAAATGAAACTCGTCCCTGGAAACTC
EY898811       --> TACTTGTTCGGTAAAATCGACATGCAAATGAAACTCGTCCCTGGAAACTC
FD560683       --> TACTTGTTCGGTAAAATCGACATGCAAATGAAACTCGTCCCTGGAAACTC
FD560828       --> TACTTGTTCGGTAAAATCGACATGCAAATGAAACTCGTCCCTGGAAACTC
FD949761       --> TACTTGTTCGGTAAAATCGACATGCAAATGAAACTCGTCCCTGGAAACTC
FY437498       --> TACTTGTTCGGTAAAATCGACATGCAAATGAAACTCGTCCCTGGAAACTC
EW723566       --> TACTTGTTCGGTAAAATCGACATGCAAATGAAACTCGTCCCTGGAAACTC
EY906519       --> TACTTGTTCGGTAAAATCGACATGCAAATGAAACTCGTCCCTGGAAACTC
FD980749       --> TACTTGTTCGGTAAAATCGACATGCAAACGAAACTCGTCCCTGGAAACTC
FD978927       --> TACTTGTTCGGTAAAATCGACATGCAAATGAAACTCGTCCCTGGAAACTC
EV535107       --> ..................................................

               301    -    351
UN22897        --> AGCCGGAACAGTCACAACCCTCTACTTGAAATCACCTGGAACAACATGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532992       <-- AGCCGGAACAGTCACAACCCTCTACTTGAAATCACCTGGAACAACATGGG
EV531080       <-- AGCCGGAACAGTCACAACCCTCTACTTGAAATCACCTGGAACAACATGGG
FD975084       <-- AGCCGGAACAGTCACAACCCTCTACTTGAAATCACCTGGAACAACATGGG
EX753074       <-- AGCCGGAACAGTCACAACCCTCTACTTGAAATCACCTGGAACAACATGGG
EY894577       <-- ..................................................
EY903994       <-- ..................................................
EV532030       <-- ..................................................
EY893872       <-- ..................................................
EV532037       <-- ..................................................
EY894757       <-- ..................................................
FD976594       <-- ..................................................
EY916596       --> ..................................................
FD532490       --> AGCCGGAACAGTCACAACCCTCTACTTGAAATCACCTGGAACAACATGGG
EV526658       --> AGCCGGAACAGTCACAACCCTCTACTTGAAATCACCTGGAACAACATGGG
EV527910       --> AGCCGGAACAGTCACAACCCTCTACTTGAAATCACCTGGAACAACATGGG
EV527922       --> AGCCGGAACAGTCACAACCCTCTACTTGAAATCACCTGGAACAACATGGG
EV529185       --> AGCCGGAACAGTCACAACCCTCTACTTGAAATCACCTGGAACAACATGGG
EX748727       --> AGCCGGAACAGTCACAACCCTCTACTTGAAATCACCCGGAACAACATGGG
EX749365       --> AGCCGGAACAGTCACAACCCTCTACTTGAAATCACCTGGAACAACATGGG
EY897604       --> AGCCGGAACAGTCACAACCCTCTACTTGAAATCACCTGGAACAACATGGG
EY898547       --> AGCCGGAACAGTCACAACCCTCTACTTGAAATCACCTGGAACAACATGGG
EY898811       --> AGCCGGAACAGTCACAACCCTCTACTTGAAATCACCTGGAACAACATGGG
FD560683       --> AGCCGGAACAGTCACAACCCTCTACTTGAAATCACCTGGAACAACATGGG
FD560828       --> AGCCGGAACAGTCACAACCCTCTACTTGAAATCACCTGGAACAACATGGG
FD949761       --> AGCCGGAACAGTCACAACCCTCTACTTGAAATCACCTGGAACAACATGGG
FY437498       --> AGCCGGAACAGTCACAACCCTCTACTTGAAATCACCTGGAACAACATGGG
EW723566       --> AGCCGGAACAGTCACAACCCTCTACTTGAAATCACCTGGAACAACATGGG
EY906519       --> AGCCGGAACAGTCACAACCCTTTACTTGAAATCACCTGGAACAACATGGG
FD980749       --> AGCCGGAACAGTCACAACCCTCTACTTGAAATCACCTGGAACAACATGGG
FD978927       --> AGCCGGAACAGTCACAACCCTCTACTTGAAATCACCTGGAACAACATGGG
EV535107       --> ..................................................

               351    -    401
UN22897        --> ACGAGATTGATTTCGAGTTTTTGGGAAACGTAAGTGGAGATCCTTACACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532992       <-- ACGAGATTGATTTCGAGTTTTTGGGAAACGTAAGTGGAGATCCTTACACA
EV531080       <-- ACGAGATTGATTTCGAGTTTTTGGGAAACGTAAGTGGAGATCCTTACACA
FD975084       <-- ACGAGATTGATTTCGAGTTTTTGGGAAACGTAAGTGGAGATCCTTACACA
EX753074       <-- ACGAGATTGATTTCGAGTTTTTGGGAAACGTAAGTGGAGATCCTTACACA
EY894577       <-- ..............................................CACA
EY903994       <-- ..............................................CACA
EV532030       <-- ..................................................
EY893872       <-- ..................................................
EV532037       <-- ..................................................
EY894757       <-- ..................................................
FD976594       <-- ..................................................
EY916596       --> ..................................................
FD532490       --> ACGAGATTGATTTCGAGTTTTTGGGAAACGTAAGTGGAGATCCTTACACA
EV526658       --> ACGAGATTGATTTCGAGTTTTTGGGAAACGTAAGTGGAGATCCTTACACA
EV527910       --> ACGAGATTGATTTCGAGTTTTTGGGAAACGTAAGTGGAGATCCTTACACA
EV527922       --> ACGAGATTGATTTCGAGTTTTTGGGAAACGTAAGTGGAGATCCTTACACA
EV529185       --> ACGAGATTGATTTCGAGTTTTTGGGAAACGTAAGTGGAGATCCTTACACA
EX748727       --> ACGAGATTGATTTCGAGTTTTTGGGAAACGTAAGTGGAGATCCTTACACA
EX749365       --> ACGAGATTGATTTCGAGTTTTTGGGAAACGTAAGTGGAGATCCTTACACA
EY897604       --> ACGAGATTGATTTCGAGTTTTTGGGAAACGTAAGTGGAGATCCTTACACA
EY898547       --> ACGAGATTGATTTCGAGTTTTTGGGAAACGTAAGTGGAGATCCTTACACA
EY898811       --> ACGAGATTGATTTCGAGTTTTTGGGAAACGTAAGTGGAGATCCTTACACA
FD560683       --> ACGAGATTGATTTCGAGTTTTTGGGAAACGTAGGTGGAGATCCTTACACA
FD560828       --> ACGAGATTGATTTCGAGTTTTTGGGAAACGTAAGTGGAGATCCTTACACA
FD949761       --> ACGAGATTGATTTCGAGTTTTTGGGAAACGTAAGTGGAGATCCTTACACA
FY437498       --> ACGAGATTGATTTCGAGTTTTTGGGAAACGTAAGTGGAGATCCTTACACA
EW723566       --> ACGAGATTGATTTCGAGTTTTTGGGAAACGTAAGTGGAGATCCTTACACA
EY906519       --> ACGAGATTGATTTCGAGTTTTTGGGAAACGTAAGTGGAGATCCTTACACA
FD980749       --> ACGAGATTGATTTCGAGTTTTTGGGAAACGTAAGTGGAGATCCTTACACA
FD978927       --> ACGAGATTGATTTCGAGTTTTTGGGAAACGTAAGTGGAGATCCTTACACA
EV535107       --> ..................................................

               401    -    451
UN22897        --> CTACACACAAATGTCTACACACAAGG-CAAAGGAGACAAAGAACAGCAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532992       <-- CTACACACAAATGTCTACACACAAGG-CAAAGGAGACAAAGAACAGCAGT
EV531080       <-- CTACACACAAATGTCTACACACAAGG-CAAAGGAGACAAAGAACAGCAGT
FD975084       <-- CTACACACAAATGTCTACACACAAGG-CAAAGGAGACAAAGAACAGCAGT
EX753074       <-- CTACACACAAATGTCTACACACAAGG-CAAAGGAGACAAAGAACAGCAGT
EY894577       <-- CTACACACAA-TGTCTACACACAAGG-CAAAGGAGACAAAGAACAGCAGT
EY903994       <-- CTACACACAAATGTATACACACAAGG-CAAAGGAGACAAAGAACAGCAGT
EV532030       <-- ...CACACAAATGTCTACACACAAGG-CAAAGGAGACAAAGAACAGCAGT
EY893872       <-- ..................................................
EV532037       <-- ..................................................
EY894757       <-- ..................................................
FD976594       <-- ..................................................
EY916596       --> ..................................................
FD532490       --> CTACACACAAATGTCTACACACAAGG-CAAAGGAGACAAAGAACAGCAGT
EV526658       --> CTACACACAAATGTCTACACACAAGG-CAAAGGAGACAAAGAACAGCAGT
EV527910       --> CTACACACAAATGTCTACACACAAGG-CAAAGGAGACAAAGAACAGCAGT
EV527922       --> CTACACACAAATGTCTACACACAAGG-CAAAGGAGACAAAGAACAGCAGT
EV529185       --> CTACACACAAATGTCTACACACAAGG-CAAAGGAGACAAAGAACAGCAGT
EX748727       --> CTACACACAAATGTCTACACACAAGG-CAAAGGAGACAAAGAACAGCAGT
EX749365       --> CTACACACAAATGTCTACACACAAGG-CAAAGGAGACAAAGAACAGCAGT
EY897604       --> CTACACACAAATGTCTACACACAAGG-CAAAGGAGACAAAGAACAGCAGT
EY898547       --> CTACACACAA-TGTCTACACACAAGG-CAAAGGAGACAAAGAACAGCAGT
EY898811       --> CTACGCACAAATGTCTACACACAAGG-CAAAGGAGACAAAGAACAGCAGT
FD560683       --> CTACACACAAATGTCTACACACAAGG-CAAAGGAGACAAAGAACAGCAGT
FD560828       --> CTACACACAAATGTCTACACACAAGG-CAAAGGAGACAAAGAACAGCAGT
FD949761       --> CTACACACAAATGTCTACACACAAGG-CAAAGGAGACAAAGAACAGCAGT
FY437498       --> CTACACACAAATGTCTACACACAAGG-CAAAGGAGACAAAGAACAGCAGT
EW723566       --> CTACACACAAATGTCTACACACAAGGGCAAAGGAGACAAAGAACAGCAGT
EY906519       --> CTACACACAAATGTATACACACAAGG-CAAAGGAGACAAAGAACAGCAGT
FD980749       --> CTACACACAAATGTCTACACACAAGG-CAAAGGAGACAAAGAACAGCAGT
FD978927       --> CTACACACAAATGTCTACACACAAGG-CAAAGGAGACAAAGAACAGCAGT
EV535107       --> ..................................................

               451    -    501
UN22897        --> TTAAACTCTGGTTCGATCCAACAGCTGATTTCCACACTTACACCATTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532992       <-- TTAAACCCTGGTTCGATCCAACAGCTGATTTCCACACTTACGCCATTCTG
EV531080       <-- TTAAACTCTGGTTCGATCCAACAGCTGATTTCCACACTTACACCATTCTG
FD975084       <-- TTAAACTCTGGTTCGATCCAACAGCTGATTTCCACACTTACACCATTCTG
EX753074       <-- TTAAACTCTGGTTCGATCCAACAGCTGATTTCCACACTTACACCATTCTG
EY894577       <-- TTAAACTCTGGTTCGATCCAACAGCTGATTTCCACACTTACACCATTCTG
EY903994       <-- TTAAACTCTGGTTCGACCCAACAGCTGATTTCCACACTTACACCATTCTG
EV532030       <-- TTAAACTCTGGTTCGATCCAACAGCTGATTTCCACACTTACACCATTCTG
EY893872       <-- ...........TTCGATCCAACAGCTGATTTCCACACTTACACCATTCTG
EV532037       <-- ..................................................
EY894757       <-- ..................................................
FD976594       <-- ..................................................
EY916596       --> ..................................................
FD532490       --> TTAAACTCTGGTTCGATCCAACAGCTGATTTCCACACTTACACCATTCTG
EV526658       --> TTAAACTCTGGTTCGATCCAACAGCTGATTTCCACACTTACACCATTCTG
EV527910       --> TTAAACTCTGGTTCGATCCAACAGCTGATTTCCACACTTACACCATTCTG
EV527922       --> TTAAACTCTGGTTCGATCCAACAGCTGATTTCCACACTTACACCATTCTG
EV529185       --> TTAAACCCTGGTTCGATCCAACAGCTGATTTCCACACTTACGCCATTCTG
EX748727       --> TTAAACTCTGGTTCGATCCAACAGCTGATTTCCACACTTACACCATTCTG
EX749365       --> TTAAACTCTGGTTCGATCCAACAGCTGATTTCCACACTTACACCATTCTG
EY897604       --> TTAAACTCTGGTTCGATCCAACAGCTGATTTCCACACTTACACCATTCTG
EY898547       --> TTAAACTCTGGTTCGATCCAACAGCTGATTTCCACACTTACACCATTCTG
EY898811       --> TTAAACTCTGGTTCGATCCAACAGCTGATTTCCACACTTACACCATTCTG
FD560683       --> TTAAACTCTGGTTCGATCCAACAGCTGATTTCCACACTTACACCATTCTG
FD560828       --> TTAAACTCTGGTTCGATCCAACAGCTGATTTCCACACTTACACCATTCTG
FD949761       --> TTAAACTCTGGTTCGATCCAACAGCTGATTTCCACACTTACACCATTCTG
FY437498       --> TTAAACTCTGGTTCGATCCAACAGCTGATTTCCACACTTACACCATTCTG
EW723566       --> TTAAACTCTGGTTCGATCCAACAGCTGATTTCCACACTTACACCATTCTG
EY906519       --> TTAAACTCTGGTTCGACCCAACAGCTGATTTCCACACTTACACCATTCTG
FD980749       --> TTAAACTCTGGTTCGATCCAACAGCTGATTTCCACACTTACACCATTCTG
FD978927       --> TTAAACTCTGGTTCGATCCAACAGCTGATTTCCACACTTACACCATTCTG
EV535107       --> ..................................................

               501    -    551
UN22897        --> TGGAACCCACAACGAATCATTTTCACCGTCGATGGAACTCCCATTAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532992       <-- TGGAACCCACAACGAATCATTTTCACTTTCGATGGAACTCCCATTAGAGA
EV531080       <-- TGGAACCCACAACGAATCATTTTCACCGTCGATGGAACTCCCATTAGAGA
FD975084       <-- TGGAACCCACAACGAATCATTTTCACCGTCGATGGAA-TCCCATTAGAGA
EX753074       <-- TGGAACCCACAACGAATCATTTTCACCGTCGATGGAACTCCCATTAGAGA
EY894577       <-- TGGAACCCACAACGAATCATTTTCACCGTCGATGGAACTCCCATTAGAGA
EY903994       <-- TGGAACCCACAACGAATCATTTTCACCGTCGATGGAACTCCCATTAGAGA
EV532030       <-- TGGAACCCACAACGAATCATTTTCACCGTCGATGGAACTCCCATTAGAGA
EY893872       <-- TGGAACCCACAACGAATCATTTTCACCGTCGATGGAACTCCCATTAGAGA
EV532037       <-- ..................................................
EY894757       <-- ..................................................
FD976594       <-- ..................................................
EY916596       --> ..................................................
FD532490       --> TGGAACCCACAACGAATCATTTTCACCGTCGATGGAACTCCCATTAGAGA
EV526658       --> TGGAACCCACAACGAATCATTTTCACCGTCGATGGAACTCCCATTAGAGA
EV527910       --> TGGAACCCACAACGAATCATTTTCACCGTCGATGGAACTCCCATTAGAGA
EV527922       --> TGGAACCCACAACGAATCATTTTCACCGTCGATGGAACTCCCATTAGAGA
EV529185       --> TGGAACCCACAACGAATCATTTTCACTTTCGATGGAACTCCCATTAGAGA
EX748727       --> TGGAACCCACAACGAATCATTTTCACCGTCGATGGAACTCCCATTAGAGA
EX749365       --> TGGAACCCACAACGAATCATTTTCACCGTCGATGGAACTCCCATTAGAGA
EY897604       --> TGGAACCCACAACGAATCATTTTCACCGTCGATGGAACTCCCATTAGAGA
EY898547       --> TGGAACCCACAACGAATCATTTTCACCGTCGATGGAACTCCCATTAGAGA
EY898811       --> TGGAACCCACAACGAATCATTTTCACCGTCGATGGAACTCCCATTAGAGA
FD560683       --> TGGAACCCACAACGAATCATTTTCACCGTCGATGGAACTCCAATTAGAGA
FD560828       --> TGGAACCCACAACGAATCATTTTCACCGTCGATGGAACTCCAATTAGAGA
FD949761       --> TGGAACCCACAACGAATCATTTTCACCGTCGATGGAACTCCCATTAGAGA
FY437498       --> TGGAACCCACAACGAATCATTTTCACCGTCGATGGAACTCCAATTAGAGA
EW723566       --> TGGAACCCACAACGAATCATTTTCACCGTCGATGGAACTCCCATTAGAGA
EY906519       --> TGGAACCCACAACGAATCATTTTCACCGTCGATGGAACTCCCATTAGAGA
FD980749       --> TGGAACCCACAACGAATCATTTTCACCGTCGATGGAACTCCCATTAGAGA
FD978927       --> TGGAACCCACAACGAATCATTTTCACCGTCGATGGAA-TCCCATTAGAGA
EV535107       --> ..................................................

               551    -    601
UN22897        --> ATTCAAGAACATGGAATCTATTGGCACTCTGTTCCCCAAGAATCGACCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532992       <-- ATTCAAGAACACTGAATCTATTGGCACTCTGTTCCCCAAGAATCGACCAA
EV531080       <-- ATTCAAGAACATGGAATCTATTGGCACTCTGTTCCCCAAGAATCGACCAA
FD975084       <-- ATTCAAGAACATGGAATCTATTGGCACTCTGTTCCCCAAGAATCGACCAA
EX753074       <-- ATTCAAGAACATGGAATCTATTGGCACTCTGTTCCCCAAGAATCGACCAA
EY894577       <-- ATTCAAGAACATGGAATCTATTGGCACTCTGTTCCCCAAGAATCGACCAA
EY903994       <-- ATTCAAGAACATGGAATCTATTGGCACTCTGTTCCCCAAGAATCGACCAA
EV532030       <-- ATTCAAGAACATGGAATCTATTGGCACTCTGTTCCCCAAGAATCGACCAA
EY893872       <-- ATTCAAGAACATGGAATCTATTGGCACTCTGTTCCCCAAGAATCGACCAA
EV532037       <-- ..................................................
EY894757       <-- ..................................................
FD976594       <-- ..................................................
EY916596       --> ..................................................
FD532490       --> ATTCAAGAACATGGAATCTATTGGCACTCTGTTCCCCAAGAATCGACCAA
EV526658       --> ATTCAAGAACATGGAATCTATTGGCACTCTGTTCCCCAAGAATCGACCAA
EV527910       --> ATTCAAGAACATGGAATCTATTGGCACTCTGTTCCCCAAGAATCGACCAA
EV527922       --> ATTCAAGAACATGGAATCTATTGGCACTCTGTTCCCCAAGAATCGACCAA
EV529185       --> ATTCAAGAACACTGAATCTATTGGCACTCTGTTCCCCAAGAATCGACCAA
EX748727       --> ATTCAAGAACATGGAATCTATTGGCACTCTGTTCCCCAAGAATCGACCAA
EX749365       --> ATTCAAGAACATGGAATCTATTGGCACTCTGTTCCCCAAGAATCGACCAA
EY897604       --> ATTCAAGAACATGGAATCTATTGGCACTCTGTTCCCCAAGAATCGACCAA
EY898547       --> ATTCAAGAACATGGAATCTATTGGCACTCTGTTCCCCAAGAATCGACCAA
EY898811       --> ATTCAAGAACATGGAATCTATTGGCACTCTGTTCCCCAAGAATCGACCAA
FD560683       --> ATTCAAGAACATGGAATCTATTGGCACTCTCTTTCCCATGAACAGACCAA
FD560828       --> ATTCAAGAACATGGAATCTATTGGCACTCTCTTTCCCAAGAACAGACCAA
FD949761       --> ATTCAAGAACATGGAATCTATTGGCACTCTGTTCCCCAGGAATCGACCAA
FY437498       --> ATTCAAGAACATGGAATCTATTGGCACTCTCTTTCCCAAGAACAGACCAA
EW723566       --> ATTCAAGAACATGGAATCTATTGGCACTCTGTTCCCCAGGAATCGACCAA
EY906519       --> ATTCAAGAACATGGAATCTATTGGCACTCTGTTCCCCAAGAATCGGCCAA
FD980749       --> ATTCAAGAACATGGAATCTATTGGCACTCTGTTCCCCAAGAATCGACCAA
FD978927       --> ATTCAAGAACATGGAATCTATTGGCACTCTGTTCCCCAAGAATCGACCAA
EV535107       --> ATTCAAGAACATGGAATCTATTGGCACTCTGTTCCCCAAGAATCGACCAA

               601    -    651
UN22897        --> TGAGAATGTACTCTAGTCTCTGGAACGCTGATGACTGGGCCACTAGAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532992       <-- TG--AATGTACTCTAGTCTCTGGAACGCTGATGACTGGGCCACTAGAGGC  Raphanus raphanistrum subsp. maritimus
EV531080       <-- TGAGAATGTACTCTAGTCTCTGGAACGCTGATGACTGGGCCACTAGAGGC  Raphanus raphanistrum subsp. maritimus
FD975084       <-- TGAGAATGTACTCTAGTCTCTGGAACGCTGATGACTGAGCCACTAGAGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX753074       <-- TGAGAATGTACTCTAGTTTCTGGAACGCTGATGACTGGGCCACTAGAGGC  Raphanus raphanistrum subsp. maritimus
EY894577       <-- TGAGAATGTACTCTAGTCTCTGGAACGCTGATGACTGGGCCACTAGAGGC  Raphanus raphanistrum subsp. maritimus
EY903994       <-- TGAGAATGTACTCTAGTCTCTGGAACGCTGATGACTGGGCCACGAGAGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV532030       <-- TGAGAATGTACTCTAGTTTCTGGAACGCTGATGACTGGGCCACTAGAGTC  Raphanus raphanistrum subsp. maritimus
EY893872       <-- TGAGAATGTACTTTAGTTTTTGGAACGCTGATGACTGGGCCACTAGAGGC  Raphanus raphanistrum subsp. maritimus
EV532037       <-- ..............AGTTTCTGGAACGCTGATGACTGGGCCACTAGAGTC  Raphanus raphanistrum subsp. maritimus
EY894757       <-- ......................GAACGCTGATGACTGGGCCACTAGAGGC  Raphanus raphanistrum subsp. maritimus
FD976594       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916596       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD532490       --> TGAGAATGTACTCTAGTCTCTGGAACGCTGATGACTGG-ACACTAGAGGC  Raphanus raphanistrum subsp. maritimus
EV526658       --> TGAGAATGTACTCTAGTCTCTGGAACGCTGATGACTGGGCCACTAGAGGC  Raphanus raphanistrum subsp. maritimus
EV527910       --> TGAGAATGTACTCTAGTCTCTGGAACGCTGATGACTGGGCCACTAGAGTC  Raphanus raphanistrum subsp. maritimus
EV527922       --> TGAGAATGTACTCTAGTCTCTGGAACGCTGATGACTGGGCCACTAGAGTC  Raphanus raphanistrum subsp. maritimus
EV529185       --> TGA--ATGTACTCTAGTCTCTGGAACGCTGATGACTGGGCCACTAGAGGC  Raphanus raphanistrum subsp. maritimus
EX748727       --> TGAGAATGTACTCTAGTCTCTGGAACGCTGATGACTGGGCCACTAGAGGC  Raphanus raphanistrum subsp. maritimus
EX749365       --> TGAGAATGTACTCTAGTCTCTGGAACGCTGATGACTGGGC-ACTAGAGGC  Raphanus raphanistrum subsp. maritimus
EY897604       --> TGAGAATGTACTCTAGTCTCTGGAACGCTGATGACTGGGCCACTAGAGGC  Raphanus raphanistrum subsp. maritimus
EY898547       --> TGAGAATGTACTCTAGTCTCTGGAACGCTGATGACTGGGCCACTAGAGGC  Raphanus raphanistrum subsp. maritimus
EY898811       --> TGAGAATGTACTCTAGTCTCTGGAACGCTGATGACTGGGCCACTAGAGGC  Raphanus raphanistrum subsp. maritimus
FD560683       --> TGAGAATGTACTCTAGTCTTTGGAACGCTGATGACTGGGCCACGAGAGGC  Raphanus sativus var. oleiformis
FD560828       --> TGAGAATGTACTCTAGTCTTTGGAACGCTGATGACTGGGCCACGAGAGGC  Raphanus sativus var. oleiformis
FD949761       --> TGAGAATGTACTCTAGTCTTTGGAACGCTGATGACTGGGCCA........  Raphanus sativus cv Early Scarlet Globe
FY437498       --> TGAGAATGTACTCTAGTCTTTGGAACGCTGATGACTGGGCCACGAGAGGC  Raphanus sativus cv GSK3-1
EW723566       --> TGAGAATGTACTCTAGTCTTTGGAACGCTGATGACTGGGCCACGAGAGGC  Raphanus sativus cv Early Scarlet Globe
EY906519       --> TGAGAATGTACTCTAGTCTCTGGAACGCTGATGACTGGGCCACGAGAGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980749       --> TGAGAATGTACTCTAGTCTCTGGAACGCTGATGACTGGGCCACTAGAGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD978927       --> TGAGAATGTACTCTAGTCTCTGGAACGCTGATGACTGAGCCACTAGAGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV535107       --> TGAGAATGTACTCTAGTCTCTGGAACGCTGATGACTGGGCCACGAGAGGT  Raphanus raphanistrum subsp. raphanistrum (MS)

               651    -    701
UN22897        --> GGTTTGGTCAAAACCGATTGGTCTAAAGCTCCTTTCACTGCTTCGTACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532992       <-- GGTTTGGTCAAAACCGATTGGTCTAAAGCTCCTTTCACTGCTTCGTACCG
EV531080       <-- GGTTTGGTCAAAACCGATTGGTCTAAAGCTCCTTTCACTGCTTCGTACCG
FD975084       <-- GGTTTGGTCAAAACCGATTGGTCTAAAGCTCCTTTCACTGCTTCGTACCG
EX753074       <-- GGTTTGGTCAAAACCGATTGGTCTAAAGCTCCTTTCACTGCTTCGTACCG
EY894577       <-- GGTTTGGTCAAAACCGATTGGTCTAAAGCTCCTTTCACTGCTTCGTACCG
EY903994       <-- GGTTTGGTCAAAACTGATTGGTATAAAGCTCCTTTCACTGCTTCGTACCG
EV532030       <-- GGTTTGGTCAAAACCGATTGGTCTAAAGCTCCTTTCACTGCTTCGTACCG
EY893872       <-- GGTTTGGTCAAAACCGATTGGTTTAAAGCTCCTTTCACTGCTTCGTACCG
EV532037       <-- GGTTTGGTCAAAACCGATTGGTCTAAAGCTCCTTTCACTGCTTCGTACCG
EY894757       <-- GGTTTGGTCAAAACCGATTGGCCTAAAGCTCCTTTCACTGCTTCGTACCG
FD976594       <-- .........................................TTCGTACCG
EY916596       --> ..................................................
FD532490       --> GGTTTGGTCAAAACCGATTGGTCTAA-GCTCCTTTCACTGCTTCGTACCG
EV526658       --> GGTTTGGTCAAAACCGATTGGTCTAAAGCTCCTTTCACTGCTTCGTACCG
EV527910       --> GGTTTGGTCAAAACCGATTGGTCTAAAGCTCCTTTCACTGCTTCGTACCG
EV527922       --> GGTTTGGTCAAAACCGATTGGTCTAAAGCTCCTTTCACTGCTTCGTACCG
EV529185       --> GGTTTGGTCAAAACCGATTGGTCTAAAGCTCCTTTCACTGCTTCGTACCG
EX748727       --> GGTTTGGTCAAAACCGATTGGTCTAAAGCTCCTTTCACTGCTTCGTACCG
EX749365       --> GGTTTGGTCAAAACCGATTGGTCTAAAGCTCCTTTCACTGCTTCGTACCG
EY897604       --> GGTTTGGTCAAAACCGATTGGTCTAAAGCTCCTTTCACTGCTTCGTACCG
EY898547       --> GGTTTGGTCAAAACCGATTGGTCTAAAGCTCCTTTCACTGCTTCGTACCG
EY898811       --> GGTTTGGTCAAAcc....................................
FD560683       --> GGTTTGGTCAAAACCGATTGGTCTAAAGCTCCTTTCACCGCTTCGTACCG
FD560828       --> GGTTTGGTCAAAACCGATTGGTCTAAAGCTCCTTTCACCGCTTCGTACCG
FD949761       --> ..................................................
FY437498       --> GGTTTGGTCAAAACCGATTGGTCTAAAGCTCCTTTCACCGCTTCGTACCG
EW723566       --> GGTTTGGTCAAAACCGATTGGTCTAAAGCTCCTTTCACCGCTTCGTACCG
EY906519       --> GGTTTGGTCAAAACTGATTGGTCTAAAGCTCCTTTCACTGCTTCGTATCG
FD980749       --> GGTTTGGTCAAAACCGATTGGTCTAAAGCTCCTTTCACTGCTTCATACCG
FD978927       --> GGTTTGGTCAAAACCGATTGGTCTAAAGCTCCTTTCACTGCTTCGTACCG
EV535107       --> GGTTTGGTCAAAACTGATTGGTCTAAAGCTCCTTTCACTGCTTCGTACCG

               701    -    751
UN22897        --> TGGCTTCAACCAAGAAGCTTGTGTTTGGTCAAACGGCAAGTCGTCTTGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532992       <-- TGGCTTCAACCAAGAAGCTTGTGTTTGGTCAAACGGCAAGTCGTCTTGCC  Raphanus raphanistrum subsp. maritimus
EV531080       <-- TGGCTTCAACCAAGAAGCTTGTGTTTGGTCAAACGGCAAGTCGTCTTGCC  Raphanus raphanistrum subsp. maritimus
FD975084       <-- TGGCTTCAACCAAGAAGCTTGTTTTTGGTCAAACGGCAAGTCGTCTTGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX753074       <-- TGGCTTCAACCAAGAAGCTTGTGTTTGGTCAAACGGCAAGTCGTCTTGCC  Raphanus raphanistrum subsp. maritimus
EY894577       <-- TGGCTTCAACCAAGAAGCTTGTGTTTGGTCAAACGGCAAGTCGTCTTGCC  Raphanus raphanistrum subsp. maritimus
EY903994       <-- TGGCTTCAACCAAGAAGCTTGTGTTTGGTCGAACGGCAAGTCGTCTTGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV532030       <-- TGGCTTCAACCAAGAAGCTTGTGTTTGGTCAAACGGCAAGTCGTCTTGCC  Raphanus raphanistrum subsp. maritimus
EY893872       <-- TGGCTTCAACCAAGAAGCTTGTGTTTGGTCAAACGGCAAGTCGTCTTGCC  Raphanus raphanistrum subsp. maritimus
EV532037       <-- TGGCTTCAACCAAGAAGCTTGTGTTTGGTCAAACGGCAAGTCGTCTTGCC  Raphanus raphanistrum subsp. maritimus
EY894757       <-- TGGCTTCAACCAAGAAGCTTGTGTTTGGTCAAACGGCAAGTCGTCTTGCC  Raphanus raphanistrum subsp. maritimus
FD976594       <-- TGGCTTCAACCAAGAAGCTTGTGTTTGGTCAAACGGCAAGTCGTCTTGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916596       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD532490       --> TGGCT-C-ACCAAGAAG.................................  Raphanus raphanistrum subsp. maritimus
EV526658       --> TGGCTTCAACCAAGAAGCTTGTGTTTGGTCAAACGGCAAGTCGTCTTGCC  Raphanus raphanistrum subsp. maritimus
EV527910       --> TGGCTTCAACCAAGAAGCTTGTGTTTGGTCAAACGGCAAGTCGTCTTGCC  Raphanus raphanistrum subsp. maritimus
EV527922       --> TGGCTTCAACCAAGAAGCTTGTGTTTGGTCAAACGGCAAGTCGTCTTGCC  Raphanus raphanistrum subsp. maritimus
EV529185       --> TGGCTTCAACCAAGAAGCTTGTGTTTGGTCAAACGGCAAGTCGTCTTGCC  Raphanus raphanistrum subsp. maritimus
EX748727       --> TGGCTTCA-CCAAGAAGCTTGTGTTTGGTCAAACGGCAAGTCGTCTTGCC  Raphanus raphanistrum subsp. maritimus
EX749365       --> TGGCT-C-ACCAAGAAGCTTGTGTTTGGTCAA-CGGCA-GTCGTCTTGCC  Raphanus raphanistrum subsp. maritimus
EY897604       --> TGGCTTCA-CCAAGA-GCTTGTGTTTGGTCAA-CGGCA-GTCGTCTTGCC  Raphanus raphanistrum subsp. maritimus
EY898547       --> TGGCTTCAACCAAGAAGCTTGTGTTTGGTCAAACGGCAAGTCGTCTTGCC  Raphanus raphanistrum subsp. maritimus
EY898811       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD560683       --> TGGCTTCA-CCAAGAAGCTTGTGTTTGGTCGAACGGCAAGTCGTCTTGCC  Raphanus sativus var. oleiformis
FD560828       --> TGGCTTCAAC-AAGAAGCTTGTGTTTGGTCGAACGGCAAGTCGTCTTGCC  Raphanus sativus var. oleiformis
FD949761       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY437498       --> TGGCTTCAACCAAGAAGCTTGTGTTTGGTCGAACGGCAAGTCGTCTTGCC  Raphanus sativus cv GSK3-1
EW723566       --> TGGCTTCAACCAAGAAGCTTTTGTTTGGTCGAACGGCAAGTCGTCTTGCC  Raphanus sativus cv Early Scarlet Globe
EY906519       --> TGGCTTCAACCAAGAAGCTTGTGTTTGGTCGAACGGCAAGTCGTCTTGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980749       --> TGGCTTCAA.........................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD978927       --> TGGCTTCAACCAAGAAGCTTGTTTTTGGTCAAACGGCAAGTCGTCTTGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV535107       --> TGGCTTCAACCAAGAAGCTTGTGTTTGGTCGAACGGCAAGTCGTCTTGCC  Raphanus raphanistrum subsp. raphanistrum (MS)

               751    -    801
UN22897        --> CTGATGTCTCGAAACAAGCGACCACTGG-CTCGTGGTTGTCCCAGGAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532992       <-- CTGATGTCTCGAAACAAGCGACCGCTGG-CTCGTGGTTGTCCCAGGAGCT
EV531080       <-- CTGATGTCTCGAAACAAGCGACCACTGG-CTCGTGGTTGTCCCAGGAGCT
FD975084       <-- CTGATGTCTCGAAACAAGCGACCACTGG-CTCGTGGTTGTCCCAGGAGCT
EX753074       <-- CTGATGTCTCGAAACAAGCGACCACTGG-CTCGTGGTTGTCCCAGGAGCT
EY894577       <-- CTGATGTCTCGAAACAAGCGACCACTGG-CTCGTGGTTGTCCCAGGAGCT
EY903994       <-- CTGATGTCTCGAAACAAGGGACCACTGG-CTCGTGGTTTTCCCAGGAGCT
EV532030       <-- CTGATGTCTCGAAACAAGCGACCACTGG-CTCGTGGTTGTCCCAGGAGCT
EY893872       <-- CTGATGTCTCGAAACAAGCGACCACTGG-CTCGTGGTTGTCCCAGGAGCT
EV532037       <-- CTGATGTCTCGAAACAAGCGACCACTGG-CTCGTGGTTGTCCCAGGAGCT
EY894757       <-- CTGATGTCTCGAAACAAGCGACCACTGG-CTCGTGGTTGTCCCAGGAGCT
FD976594       <-- CTGATGTCTCGAAACAAGCGACCACTGG-CTCGTGGTTGTCCCAGGAGCT
EY916596       --> ..................................................
FD532490       --> ..................................................
EV526658       --> CTGATGTCTCGAAACAAGCGAC-ACTGGGCTCGTGGTTGTCCCAGGAGCT
EV527910       --> CTGATGTCTCGAAACAAGCGACCACTGG-CTCGTG-TTGTCCCAG-AGCT
EV527922       --> CTGATGTCTCGAAACAAGCGACCACTGG-CTCGTG-TTGTCCCAGGAGCT
EV529185       --> CTGATGTCTCGAAACAAGCGACCGCTGG-CTCGTGGTTGTCCCAGGAGCT
EX748727       --> CTGATGTCTCGAA-CA-GCGAC-ACTGG-CTCGTGGT-GTCC-AG-AGCT
EX749365       --> CTGATGTCTCGAAca...................................
EY897604       --> CTGATGTCTCGAA-C-AGCGACCACTGG-CTCGTGGTTGTCCCAGGAGCT
EY898547       --> CTGATGTCTCGAA-CAAGCGACCACTGG-CTCG.................
EY898811       --> ..................................................
FD560683       --> CTGATGTCTCGAA-CAAGGGACCACTGG-CTCGTGGTgtctcag......
FD560828       --> CTGATGTCTCGAA.....................................
FD949761       --> ..................................................
FY437498       --> CTGATGTCTCGAAACAAGGGACCACTGG-CTCGTGGTTGTCTCAGGAGCT
EW723566       --> CTGATGTCTCGAAACAAGGGAC-ACTGG......................
EY906519       --> CTGATGTCT.........................................
FD980749       --> ..................................................
FD978927       --> CTGATGTCTCGAAACAAGCGACCACTGG-CTCGTGGTTGTCCCAGGAGCT
EV535107       --> CTGATGTCTCGAAA....................................

               801    -    851
UN22897        --> CGACTCGACTGCTCAAGAAAGGATGAGATGGGTGCAGAAAAACTATATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532992       <-- CGACTCGACTGCTCAAGAAAGGATGAGATGGGTGCAGAAAAACTATATGA
EV531080       <-- CGACTCGACTGCTCAAGAAAGGATGAGATGGGTGCAGAAAAACTATATGA
FD975084       <-- CGACTCGACTGCTCAAGAAAGGATGAGATGGGTGCAGAAAAACTATATGA
EX753074       <-- CGACTCGGCTGCTCAAGAAAGGATGAGATGGGTGCAGAAAAACTATATGA
EY894577       <-- CGACTCGACTGCTCAAGAAAGGATGAGATGGGTGCAGAAAAACTATATGA
EY903994       <-- CGACTCGACTGGTCAAGAAAGGATGAGATGGGTGCAGAAAAACTATATGA
EV532030       <-- CGACTCGACTGCTCAAGAAAGGATGAGATGGGTGCAGAAAAACTATATGA
EY893872       <-- CGACTCGACTGCTCAAGAAAGGATGAGATGGGTGCAGAAAAACTATATGA
EV532037       <-- CGACTCGACTGCTCAAGAAAGGATGAGATGGGTGCAGAAAAACTATATGA
EY894757       <-- CGACTCGACTGCTCAAGAAAGGATGAGATGGGTGCAGAAAAACTATATGA
FD976594       <-- CGACTCGACTGCTCAAGAAAGGATGAGATGGGGGCAGAAAAACTATATGA
EY916596       --> ..................................................
FD532490       --> ..................................................
EV526658       --> CGACTCGACTGCTCAAG.................................
EV527910       --> CGACTCGACTGCTCA-GAAAG-ATGAGATGGGTGCAGAAAA-CTATATGA
EV527922       --> CGACTCGACTGCTCAAGAAAGGATGAGATGGGTGCAGAAAA-CTATATGA
EV529185       --> CGACTCGACTGCTCAAG.................................
EX748727       --> CGACTCGACTGCTCA-GAAAG-ATGAGATGGGTGCAGAAAA-CTATA...
EX749365       --> ..................................................
EY897604       --> CGACT.............................................
EY898547       --> ..................................................
EY898811       --> ..................................................
FD560683       --> ..................................................
FD560828       --> ..................................................
FD949761       --> ..................................................
FY437498       --> TGACTCAACTGCTCAAGAAAGGATGAGATGGGTGCAGAAAAACTATATGA
EW723566       --> ..................................................
EY906519       --> ..................................................
FD980749       --> ..................................................
FD978927       --> CGACTCGACTGCTCAAGAAAGGATGAGATGGGTGCAGAAAAACTATATGA
EV535107       --> ..................................................

               851    -    901
UN22897        --> TATACAACTATTGTACGGATTCAAAGAGATTCCCTCAAGGTCTTCCAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532992       <-- TATACAACTATTGTACGGATTCAAAGAGATTCCCTCAAGGTCTTCCAAAA
EV531080       <-- TATACAACTATTGTACGGATTCAAAGAGATTCCCTCAAGGTCTTCCAAAA
FD975084       <-- TATACAACTATTGTACGGATTCAAAGAGATTCCCTCAAGGTCTTCCAAAA
EX753074       <-- TATACAACTATTGTACGGATTCAAAGAGATTCCCTCAAGGTCTTCCAAAA
EY894577       <-- TATACAACTATTGTACGGATTCAAAGAGATTCCCTCAAGGTCTTCCAAAA
EY903994       <-- TATACAACTATTGTACGGATTCAAAGAGATTTCCTCAAGGTCTTCCAAAA
EV532030       <-- TATACAACTATTGTACGGATTCAAAGAGATTCCCTCAAGGTCTTCCAAAA
EY893872       <-- TATACAACTATTGTACGGATTCAAAGAGATTCCCTCAAGGTCTTCCAAAA
EV532037       <-- TATACAACTATTGTACGGATTCAAAGAGATTCCCTCAAGGTCTTCCAAAA
EY894757       <-- TATACAACTATTGTACGGATTCAAAGAGATTCCCTCAAGGTCTTCCAAAA
FD976594       <-- TATACAACTATTGTACGGATTCAAAGAGATTCCCTCAAGGT-TTCCAAAA
EY916596       --> ..................................................
FD532490       --> ..................................................
EV526658       --> ..................................................
EV527910       --> TATACA-CTA-TGTACGatt..............................
EV527922       --> TATACA-CTATTtg....................................
EV529185       --> ..................................................
EX748727       --> ..................................................
EX749365       --> ..................................................
EY897604       --> ..................................................
EY898547       --> ..................................................
EY898811       --> ..................................................
FD560683       --> ..................................................
FD560828       --> ..................................................
FD949761       --> ..................................................
FY437498       --> TATACAACTATTGCACGGATTCAA..........................
EW723566       --> ..................................................
EY906519       --> ..................................................
FD980749       --> ..................................................
FD978927       --> TATACAACTATTGTACGGATTCAAAGAGATTCCCTCAAG-TCTTCCAAAA
EV535107       --> ..................................................

               901    -    951
UN22897        --> GAGTGCTTAGC--C-GCATAGAGAGTAAA-GAGTTGAGAGCAAAACAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532992       <-- GAGTGCTTAGC--C-GCATAGAGAGTAAA-GAGTTGAGAGCAAAACAAAA
EV531080       <-- GAGTGCTTAGC--C-GCATAGAGAGTAAA-GAGTTGAGAACAAAACAAAA
FD975084       <-- GAGTGCTTAGC--C-GCATAGAGAGTAAA-GAGTTGAGAGCAAAACAAAA
EX753074       <-- GAGTGCTTAGC--C-GCATAGAGAGTAAA-GAGTTGAGAGCAAAACAAAA
EY894577       <-- GAGTGCTTAGC--C-GCATAGAGAGTAAA-GAGTTGAGAGCAAAACAAAA
EY903994       <-- GAGTGCTTAGCTGCTGCATAGAGAGTAAAAGAGTTGAGAGCAGAACAAAA
EV532030       <-- GAGTGCTTAGC--C-GCATAGAGAGTAAA-GAGTTGAGAGCAAAACAAAA
EY893872       <-- GAGTGCTTAGC--C-GCATAGAGAGTAAA-GAGTTGAGAGCAAAACAAAA
EV532037       <-- GAGTGCTTAGC--C-GCATAGAGAGTAAA-GAGTTGAGAGCAAAACAAAA
EY894757       <-- GAGTGCTTAGC--C-GCATAGAGAGTAAA-GAGTTGAGAGCAAAACAAAA
FD976594       <-- GAGTGCTTAGC--C-GCATAGAGAGTAAA-GAGTTGAGAGCAAAACAAAA
EY916596       --> ..................................................
FD532490       --> ..................................................
EV526658       --> ..................................................
EV527910       --> ..................................................
EV527922       --> ..................................................
EV529185       --> ..................................................
EX748727       --> ..................................................
EX749365       --> ..................................................
EY897604       --> ..................................................
EY898547       --> ..................................................
EY898811       --> ..................................................
FD560683       --> ..................................................
FD560828       --> ..................................................
FD949761       --> ..................................................
FY437498       --> ..................................................
EW723566       --> ..................................................
EY906519       --> ..................................................
FD980749       --> ..................................................
FD978927       --> GAGTGCTTAGC--C-GCATAGAGAGTAAA-GAGTTGAGAGCAAAACAAAA
EV535107       --> ..................................................

               951    -   1001
UN22897        --> TTCTACTTTTTT--ATTGCTATAAAATTATATTCATTTTATTGTAGATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532992       <-- TTCTACTTTTTT--ATTGCTATAAAATTATATTCATTTTATTGTAGATCA
EV531080       <-- TTCTACTTTTTT--ATTGCTATAAAATTATATTCATTT............
FD975084       <-- TTCTACTTTTTT--ATTGCTATAAAATTATATTCATTTTATTGTAGATCA
EX753074       <-- TTCTACTTTTTT--ATTGCTATAAAATTATATTCATTTTATTGTAGATCA
EY894577       <-- TTCTACTTTTTT--ATTGCTATAAAATTATATTCATTTTATTGTAGATCA
EY903994       <-- TTCTACTTTTTTTTATTGCTATAAAATTATATTCATTTTATTGTAGATCA
EV532030       <-- TTCTACTTTTTT--ATTGCTATAAAATTATATTCATTTTATTGTAGATCC
EY893872       <-- TTTTACTTTTTT--ATTGCTATAAAATTATATTCATTTTATTGTAGATCA
EV532037       <-- TTCTACTTTTTT--ATTGCTATAAAATTATATTCATTTTATTGTAGATCC
EY894757       <-- TTCTACTTTTTT--ATTGCTATAAAATTATATTCATTTTATTGTAGATCA
FD976594       <-- TTCTACTTTTTT--ATTGCT..............................
EY916596       --> ..................................................
FD532490       --> ..................................................
EV526658       --> ..................................................
EV527910       --> ..................................................
EV527922       --> ..................................................
EV529185       --> ..................................................
EX748727       --> ..................................................
EX749365       --> ..................................................
EY897604       --> ..................................................
EY898547       --> ..................................................
EY898811       --> ..................................................
FD560683       --> ..................................................
FD560828       --> ..................................................
FD949761       --> ..................................................
FY437498       --> ..................................................
EW723566       --> ..................................................
EY906519       --> ..................................................
FD980749       --> ..................................................
FD978927       --> TTCTACTTTTTT--ATTGCTAT............................
EV535107       --> ..................................................

               1001   -   1051
UN22897        --> CATTAAATTTTATTGATTCGTTTGCATTGTATTAATTCGTTAACGTAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532992       <-- CATTAAATTTTATTGATTCGTTTGCATTGTATTAATTCGTTAACGTAATA
EV531080       <-- ..................................................
FD975084       <-- CATTAAATTTTATTGATTCGTTTGCATTGTAT..................
EX753074       <-- CATTAAATTTTATTGATTCGTTTGCATTGTATTAATTCGTTAACGTAATA
EY894577       <-- CATTAAATTTTATTGATTCGTTTGCATTGTATTAATTCGTTAACGTAATA
EY903994       <-- CATTAAATTTTATTGATTCGTTTGCg........................
EV532030       <-- CATTAAATTTTATTGATTCGTTTGCATTGTATTAATTCGTTAACGTAATA
EY893872       <-- CATTAAATTTTATTGATTCGTTTGCATTGTATTAATTCGTTAACGTAATA
EV532037       <-- CATTAAATTTTATTGATTCGTTTGCATTGTATTAATTCGTTAACGTAATA
EY894757       <-- CATTAAATTTTATTGATTCGTTTGCATTGTATTAATTCGTTAACGTAATA
FD976594       <-- ..................................................
EY916596       --> ..................................................
FD532490       --> ..................................................
EV526658       --> ..................................................
EV527910       --> ..................................................
EV527922       --> ..................................................
EV529185       --> ..................................................
EX748727       --> ..................................................
EX749365       --> ..................................................
EY897604       --> ..................................................
EY898547       --> ..................................................
EY898811       --> ..................................................
FD560683       --> ..................................................
FD560828       --> ..................................................
FD949761       --> ..................................................
FY437498       --> ..................................................
EW723566       --> ..................................................
EY906519       --> ..................................................
FD980749       --> ..................................................
FD978927       --> ..................................................
EV535107       --> ..................................................

               1051   -   1101
UN22897        --> CTTTTAAACCG.
                   ~~~~~~~~~~~~
EV532992       <-- CTTTTAAACC..
EV531080       <-- ............
FD975084       <-- ............
EX753074       <-- CTTTTAAACtg.
EY894577       <-- CTTTTAAACC..
EY903994       <-- ............
EV532030       <-- CTTTT.......
EY893872       <-- CTTTTAAACCG.
EV532037       <-- CTTTT.......
EY894757       <-- CTTTTAAACCcc
FD976594       <-- ............
EY916596       --> ............
FD532490       --> ............
EV526658       --> ............
EV527910       --> ............
EV527922       --> ............
EV529185       --> ............
EX748727       --> ............
EX749365       --> ............
EY897604       --> ............
EY898547       --> ............
EY898811       --> ............
FD560683       --> ............
FD560828       --> ............
FD949761       --> ............
FY437498       --> ............
EW723566       --> ............
EY906519       --> ............
FD980749       --> ............
FD978927       --> ............
EV535107       --> ............