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Alignment for radish unigene UN22916

               1      -     51
UN22916        --> GGAACGTGATACATCCCCCGCAACTCTCCATTTTCGTCTCCCAAGGCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533016       <-- ..................................................
FD967627       <-- ..................................................
EY926852       <-- ..................................................
FD553766       <-- ..................................................
EW721453       <-- ..................................................
EV545595       <-- ..................................................
EX777628       <-- ..................................................
FD975961       <-- ..................................................
FD577984       --> GGAACGTGATACATCCCCCGCAACTCTCCATTTTCGTCTCCCAAGGCCAA
EX904227       --> .GAACGTGATACATCCCCCGCAACTCTCCATTTTCGTCTCCCAAGGCCAA
FD954911       --> ...ggGTGATACATCCCCCGCAACTCTCCATTTTCGTCTCCCAAGGCCAA
EX765824       --> ..........ggATCCCCCGCAACTCTCCATTTTCGTCTCCCAAGGCCAA
FY442085       --> ..................................................
FD559255       --> ..................................................
FY447226       --> ..................................................
FD557726       --> ..................................................
EV550279       --> ..................................................
FD971505       --> ..................................................
EV529214       --> ..................................................
FD540192       --> ..................................................
EW717471       --> ..................................................
FD980000       --> ..................................................
EV549125       --> ..................................................
EX773814       --> ..................................................
FD937565       --> ..................................................
FD557482       --> ..................................................

               51     -    101
UN22916        --> AGCCAAGGCAGAAGAAGAACACATGTCGATCTACGTCGCGTCACGGCGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533016       <-- ..................................................
FD967627       <-- ..................................................
EY926852       <-- ..................................................
FD553766       <-- ..................................................
EW721453       <-- ..................................................
EV545595       <-- ..................................................
EX777628       <-- ..................................................
FD975961       <-- ..................................................
FD577984       --> AGCCAAGGCAGAAGAAGAACACATGTCGATCTACGTCGCGTCACGGCGAC
EX904227       --> AGCCAAGGCAGAAGAAGAACACATGTCGATCTACGTCGCGTCACGGCGAC
FD954911       --> AGCCAAGGCAGAAGAAGAACACATGTCGATCTACGTCGCGTCACGGCGAC
EX765824       --> AGCCAAGGCAGAAGAAGAACACATGTCGATCTACGTCGCGTCACGGCGAC
FY442085       --> AGCCAAGGCAGAAGAAGAACACATGTCGATCTACGTCGCGTCACGGCGAC
FD559255       --> ..................................................
FY447226       --> ..................................................
FD557726       --> ..................................................
EV550279       --> ..................................................
FD971505       --> ..................................................
EV529214       --> ..................................................
FD540192       --> ..................................................
EW717471       --> ..................................................
FD980000       --> ..................................................
EV549125       --> ..................................................
EX773814       --> ..................................................
FD937565       --> ..................................................
FD557482       --> ..................................................

               101    -    151
UN22916        --> TTTCCGCCAGAACAACCGCAGAGACGCTGCGTTATGTCACAGCTCTGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533016       <-- ..................................................
FD967627       <-- ..................................................
EY926852       <-- ..................................................
FD553766       <-- ..................................................
EW721453       <-- ..................................................
EV545595       <-- ..................................................
EX777628       <-- ..................................................
FD975961       <-- ..................................................
FD577984       --> TTTCCGCCAGAACAACCGCAGAGACGCTGCGTTATGTCACAGCTCTGAGA
EX904227       --> TTTCCGCCAGAACAACCGCAGAGACGCTGCGTTATGTCACAGCTCTGAGA
FD954911       --> TTTCCGCCAGAACAACCGCAGAGACGCTGCGTTATGTCACAGCTCTGAGA
EX765824       --> TTTCCGCCAGAACAACCGCGGGGACGCTGCGTTATGCCAGTGCTCTGAGA
FY442085       --> TTTCCGCCAGAACAACCGCAGAGACGCTGCGTTATGTCACAGCTCTGAGA
FD559255       --> ..................................................
FY447226       --> ..................................................
FD557726       --> ..................................................
EV550279       --> ..................................................
FD971505       --> ..................................................
EV529214       --> ..................................................
FD540192       --> ..................................................
EW717471       --> ..................................................
FD980000       --> ..................................................
EV549125       --> ..................................................
EX773814       --> ..................................................
FD937565       --> ..................................................
FD557482       --> ..................................................

               151    -    201
UN22916        --> TCTTATTCAACGTCGTCGTTTAGGGAGGAGAGGGACACCTTTGGGCCGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533016       <-- ..................................................
FD967627       <-- ..................................................
EY926852       <-- ..................................................
FD553766       <-- ..................................................
EW721453       <-- ..................................................
EV545595       <-- ..................................................
EX777628       <-- ..................................................
FD975961       <-- ..................................................
FD577984       --> TCTTATTCAACGTCGTCGTTTAGGGAGGAGAGGGACACCTTTGGGCCGAT
EX904227       --> TCTTATTCAACGTCGTCGTTTAGGGAGGAGAGGGACACCTTTGGGCCGAT
FD954911       --> TCTTATTCAACGTCGTCGTTTAGGGAGGAGAGGGACACCTTTGGGCCGAT
EX765824       --> TCTTATTCAACGTCGTCGTTTAGGGAGGAGAGGGACACCTTCGGCCCGAT
FY442085       --> TCTTATTCAACGTCGTCGTTTAGGGAGGAGAGGGACACCTTTGGGCCGAT
FD559255       --> ..................................................
FY447226       --> ..................................................
FD557726       --> ..................................................
EV550279       --> ..................................................
FD971505       --> ..................................................
EV529214       --> ..................................................
FD540192       --> ..................................................
EW717471       --> ..................................................
FD980000       --> ..................................................
EV549125       --> ..................................................
EX773814       --> ..................................................
FD937565       --> ..................................................
FD557482       --> ..................................................

               201    -    251
UN22916        --> CCAAGTTCCTTCCGATAAATTGTGGGGAGCCCAGACGCAGAGATCGCTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533016       <-- ..................................................
FD967627       <-- ..................................................
EY926852       <-- ..................................................
FD553766       <-- ..................................................
EW721453       <-- ..................................................
EV545595       <-- ..................................................
EX777628       <-- ..................................................
FD975961       <-- ..................................................
FD577984       --> CCAAGTTCCTTCCGATAAATTGTGGGGAGCCCAGACGCAGAGATCGCTAC
EX904227       --> CCAAGTTCCTTCCGATAAATTGTGGGGAGCCCAGACGCAGAGATCGCTAC
FD954911       --> CCAAGTTCCTTCCGATAAATTGTGGGGAGCCCAGACGCAGAGATCGCTAC
EX765824       --> CCAAGTTCCTTCCGATAAATTGTGGGGAGCCCAGACGCAGAGATCGCTAC
FY442085       --> CCAAGTTCCTTCCGATAAATTGTGGGGAGCCCAGACGCAGAGATCGCTAC
FD559255       --> ....................................GCAGAGATCTCTGC
FY447226       --> ..................................................
FD557726       --> ..................................................
EV550279       --> ..................................................
FD971505       --> ..................................................
EV529214       --> ..................................................
FD540192       --> ..................................................
EW717471       --> ..................................................
FD980000       --> ..................................................
EV549125       --> ..................................................
EX773814       --> ..................................................
FD937565       --> ..................................................
FD557482       --> ..................................................

               251    -    301
UN22916        --> AGAACTTCGAAATCGGTGGTGAGCGGGAGCGTATGCCCGAACCTATCGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533016       <-- ..................................................
FD967627       <-- ..................................................
EY926852       <-- ..................................................
FD553766       <-- ..................................................
EW721453       <-- ..................................................
EV545595       <-- ..................................................
EX777628       <-- ..................................................
FD975961       <-- ..................................................
FD577984       --> AGAACTTCGAAATCGGTGGTGAGCGGGAGCGTATGCCCGAACCTATCGTC
EX904227       --> AGAACTTCGAAATCGGTGGTGAGCGGGAGCGTATGCCCGAACCTATCGTC
FD954911       --> AGAACTTCGAAATCGGTGGTGAGCGGGAGCGTATGCCCGAACCTATCGTC
EX765824       --> AGAACTTCGAAATCGGTGGTGAGCGGGAGCGTATGCCCGAACCTATCGTC
FY442085       --> AGAACTTCGAAATCGGTGGTGAGCGGGAGCGTATGCCCGAACCTATCGTC
FD559255       --> AGAACTTCGAGATCGGCGGTGAGCGGGAGCGTATGCCCGAACCTATCGTC
FY447226       --> ..............GGTGGTGAGCGGGAGCGTATGCCCGAACCTATCGTC
FD557726       --> ..................................................
EV550279       --> ..................................................
FD971505       --> ..................................................
EV529214       --> ..................................................
FD540192       --> ..................................................
EW717471       --> ..................................................
FD980000       --> ..................................................
EV549125       --> ..................................................
EX773814       --> ..................................................
FD937565       --> ..................................................
FD557482       --> ..................................................

               301    -    351
UN22916        --> CGCGCTTTCGGCGTCTTGAAGAAGTGCGCTGCCAAGGTAAACATGGAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533016       <-- ..................................................
FD967627       <-- ..................................................
EY926852       <-- ..................................................
FD553766       <-- ..................................................
EW721453       <-- ..................................................
EV545595       <-- ..................................................
EX777628       <-- ..................................................
FD975961       <-- ..................................................
FD577984       --> CGCGCTTTCGGCGTCTTGAAGAAGTGCGCTGCCAAGGTAAACATGGAGTA
EX904227       --> CGCGCTTTCGGCGTCTTGAAGAAGTGCGCTGCCAAGGTAAACATGGAGTA
FD954911       --> CGCGCTTTCGGCGTCTTGAAGAAGTGCGCTGCCAAGGTAAACATGGAGTA
EX765824       --> CGCGCTTTCGGCGTCTCGAAGAAGTGCGCTGCCAAGGTAAACATGGAGTA
FY442085       --> CGCGCTTTCGGCGTCTTGAAGAAGTGCGCTGCCAAGGTAAACATGGAGTA
FD559255       --> CGCGCTTTTGGCGTCTTGAAGAAGTGCGCTGCCAAGGTAAACATGGAGTA
FY447226       --> CGCGCTTTCGGCGTCTTGAAGAAGTGCGCTGCCAAGGTAAACATGGAGTA
FD557726       --> ..................................................
EV550279       --> ..................................................
FD971505       --> ..................................................
EV529214       --> ..................................................
FD540192       --> ..................................................
EW717471       --> ..................................................
FD980000       --> ..................................................
EV549125       --> ..................................................
EX773814       --> ..................................................
FD937565       --> ..................................................
FD557482       --> ..................................................

               351    -    401
UN22916        --> TGGACTTGATCCAACGATTGGGAAAGCGATTATGGAAGCTGCTCAGGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533016       <-- ..................................................
FD967627       <-- ..................................................
EY926852       <-- ..................................................
FD553766       <-- ..................................................
EW721453       <-- ..................................................
EV545595       <-- ..................................................
EX777628       <-- ..................................................
FD975961       <-- ..................................................
FD577984       --> TGGACTTGATCCAACGATTGGGAAAGCGATTATGGAAGCTGCTCAGGAAG
EX904227       --> TGGACTTGATCCAACGATTGGGAAAGCGATTATGGAAGCTGCTCAGGAAG
FD954911       --> TGGACTTGATCCAACGATTGGGAAAGCGATTATGGAAGCTGCTCAGGAAG
EX765824       --> TGGACTTGATCCAACGATTGGGAAAGCGATTATGGAAGCAGCTCAGGAAG
FY442085       --> TGGACTTGATCCAACGATTGGGAAAGCGATTATGGAAGCTGCTCAGGAAG
FD559255       --> TGGACTCGATCCAACGATTGGGGAAGCGATTATGGAAGCAGCTCAGGAAG
FY447226       --> TGGACTTGATCCAACGATTGGGAAAGCGATTATGGAAGCTGCTCAGGAAG
FD557726       --> ..................................................
EV550279       --> ..................................................
FD971505       --> ..................................................
EV529214       --> ..................................................
FD540192       --> ..................................................
EW717471       --> ..................................................
FD980000       --> ..................................................
EV549125       --> ..................................................
EX773814       --> ..................................................
FD937565       --> ..................................................
FD557482       --> ..................................................

               401    -    451
UN22916        --> TAGCAGAGGGAAAGCTCAATGATCATTTCCCCCTTGTTGTTTGGCAAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533016       <-- ..................................................
FD967627       <-- ..................................................
EY926852       <-- ..................................................
FD553766       <-- ..................................................
EW721453       <-- ..................................................
EV545595       <-- ..................................................
EX777628       <-- ..................................................
FD975961       <-- ..................................................
FD577984       --> TAGCAGAGGGAAAGCTCAATGATCATTTCCCCCTTGTTGTTTGGCAAACT
EX904227       --> TAGCAGAGGGAAAGCTCAATGATCATTTCCCCCTTGTTGTTTGGCAAACT
FD954911       --> TAGCAGAGGGAAAGCTCAATGATCATTTCCCCCTTGTTGTTTGGCAAACT
EX765824       --> TAGCTGAGGGCAAACTCAATGATCATTTCCCCCTTGTTGTTTGGCAAACT
FY442085       --> TAGCAGAGGGAAAGCTCAATGATCATTTCCCCCTTGTTGTTTGGCAAACT
FD559255       --> TAGCTGAGGGCAAACTCAATGATCATTTCCCCCTTGTTGTTTGGCAAACT
FY447226       --> TAGCAGAGGGAAAGCTCAATGATCATTTCCCCCTTGTTGTTTGGCAAACT
FD557726       --> ......................gCATTTCCCCCTTGTTGTTTGGCAAACT
EV550279       --> ..................................................
FD971505       --> ..................................................
EV529214       --> ..................................................
FD540192       --> ..................................................
EW717471       --> ..................................................
FD980000       --> ..................................................
EV549125       --> ..................................................
EX773814       --> ..................................................
FD937565       --> ..................................................
FD557482       --> ..................................................

               451    -    501
UN22916        --> GGTAGTGGCACTCAGAGTAACATGAATGCTAATGAGGTCATTGCTAACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533016       <-- ..................................................
FD967627       <-- ..................................................
EY926852       <-- ..................................................
FD553766       <-- ..................................................
EW721453       <-- ..................................................
EV545595       <-- ..................................................
EX777628       <-- ..................................................
FD975961       <-- ..................................................
FD577984       --> GGTAGTGGCACTCAGAGTAACATGAATGCTAATGAGGTCATTGCTAACAG
EX904227       --> GGTAGTGGCACTCAGAGTAACATGAATGCTAATGAGGTCATTGCTAACAG
FD954911       --> GGTAGTGGCACTCAGAGTAACATGAATGCTAATGAGGTCATTGCTAACAG
EX765824       --> GGTAGTGGCACTCAGAGTAACATGAATGCCAATGAGGTCATTGCTAACAG
FY442085       --> GGTAGTGGCACTCAGAGTAACATGAATGCTAATGAGGTCATTGCTAACAG
FD559255       --> GGTAGTGGCACTCAGAGTAACATGAACGCTAGTGAGGTCATTGCTAACAG
FY447226       --> GGTAGTGGCACTCAGAGTAACATGAATGCTAATGAGGTCATTGCTAACAG
FD557726       --> GGTAGTGGCACTCAGAGTAACATGAACGCTAATGAGGTCATTGCTAACAG
EV550279       --> ..................................................
FD971505       --> ..................................................
EV529214       --> ..................................................
FD540192       --> ..................................................
EW717471       --> ..................................................
FD980000       --> ..................................................
EV549125       --> ..................................................
EX773814       --> ..................................................
FD937565       --> ..................................................
FD557482       --> ..................................................

               501    -    551
UN22916        --> AGCAGCTGAGATTCTTGGTCGCAAACGTGGTGAAAAATGCGTCCACCCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533016       <-- ..................................................
FD967627       <-- ..................................................
EY926852       <-- ..................................................
FD553766       <-- ..................................................
EW721453       <-- ..................................................
EV545595       <-- ..................................................
EX777628       <-- ..................................................
FD975961       <-- ..................................................
FD577984       --> AGCAGCTGAGATTCTTGGTCGCAAACGTGGTGAAAAATGCGTCCACCCTA
EX904227       --> AGCAGCTGAGATTCTTGGTCGCAAACGTGGTGAAAAATGCGTCCACCCTA
FD954911       --> AGCAGCTGAGATTCTTGGTCGCAAACGTGGTGAAAAATGCGTCCACCCTA
EX765824       --> AGCAGCTGAGATTCTTGGTCGCAAACGTGGTGAAAAATGCGTCCACCCTA
FY442085       --> AGCAGCTGAGATTCTTGGTCGCAAACGTGGTGAAAAATGCGTCCACCCTA
FD559255       --> AGCAGCTGAGATTCTTGGTCGCAAACGTGGTGAAAAATGTGTCCACCCTA
FY447226       --> AGCAGCTGAGATTCTTGGTCGCAAACGTGGTGAAAAATGCGTCCACCCTA
FD557726       --> AGCAGCTGAGATTCTTGGTCGCAAACGTGGTGAAAAATGTGTCCACCCTA
EV550279       --> ....................GCAAACGTGGTGAAAAATGCGTCCACCCTA
FD971505       --> ..................................................
EV529214       --> ..................................................
FD540192       --> ..................................................
EW717471       --> ..................................................
FD980000       --> ..................................................
EV549125       --> ..................................................
EX773814       --> ..................................................
FD937565       --> ..................................................
FD557482       --> ..................................................

               551    -    601
UN22916        --> ATGACCATGTCAACCGTTCTCAATCTTCTAACGACACTTTCCCTACTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533016       <-- ..................................................
FD967627       <-- ..................................................
EY926852       <-- ..................................................
FD553766       <-- ..................................................
EW721453       <-- ..................................................
EV545595       <-- ..................................................
EX777628       <-- ..................................................
FD975961       <-- ..................................................
FD577984       --> ATGACCATGTCAACCGTTCTCAATCTTCTAACGACACTTTCCCTACTGTC
EX904227       --> ATGACCATGTCAACCGTTCTCAATCTTCTAACGACACTTTCCCTACTGTC
FD954911       --> ATGACCATGTCAACCGTTCTCAATCTTCTAACGACACTTTCCCTACTGTC
EX765824       --> ATGACCATGTCAACCGTTCTCAATCATCTAACGACACTTTCCCTACTGTC
FY442085       --> ATGACCATGTCAACCGTTCTCAATCTTCTAACGACACTTTCCCTACTGTC
FD559255       --> ATGACCATGTCAACCGTTCTCAATCTTCTAACGACACTTTCCCTACTGTC
FY447226       --> ATGACCATGTCAACCGTTCTCAATCTTCTAACGACACTTTCCCTACTGTC
FD557726       --> ATGACCATGTCAACCGTTCTCAATCTTCTAACGACACTTTCCCTACTGTC
EV550279       --> ATGACCATGTCAACCGTTCTCAATCATCTAACGACACTTTCCCTACTGTC
FD971505       --> .......................gCTTCTAACGACACTTTCCCTACTGTC
EV529214       --> ..................................................
FD540192       --> ..................................................
EW717471       --> ..................................................
FD980000       --> ..................................................
EV549125       --> ..................................................
EX773814       --> ..................................................
FD937565       --> ..................................................
FD557482       --> ..................................................

               601    -    651
UN22916        --> ATGCACATTGCAGCTGCAACCGAGATTAATTCAAGGCTCATTCCTAGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533016       <-- ..................................................
FD967627       <-- ..................................................
EY926852       <-- ..................................................
FD553766       <-- ..................................................
EW721453       <-- ..................................................
EV545595       <-- ..................................................
EX777628       <-- ..................................................
FD975961       <-- ..................................................
FD577984       --> ATGCACATTGCAGCTGCAACCGAGATTAATTCAAGGCTCATTCCTAGTTT
EX904227       --> ATGCACATTGCAGCTGCAACCGAGATTAATTCAAGGCTCATTCCTAGTTT
FD954911       --> ATGCACATTGCAGCTGCAACCGAGGTTAATTCAAGGCTCATTCCTAGTTT
EX765824       --> ATGCACATTGCAGCTGCAACCGAGATTAATTCAAGGCTCATTCCTAGTTT
FY442085       --> ATGCACATTGCAGCTGCAACCGAGATTAATTCAAGGCTCATTCCTAGTTT
FD559255       --> ATGCACATTGCAGCTACAACCGAGATTAATTCAAGGCTCATCCCTAGTTT
FY447226       --> ATGCACATTGCAGCTGCAACCGAGATTAATTCAAGGCTCATTCCTAGTTT
FD557726       --> ATGCACATTGCAGCTGCAACCGAGATTAATTCAAGGCTCATCCCTAGTTT
EV550279       --> ATGCACATTGCAGCTGCAACCGAGATTAATTCAAGGCTCATTCCTAGTTT
FD971505       --> ATGCACATTGCAGCTGCAACCGAGATTAATTCAAGGCTCATCCCTAGTTT
EV529214       --> ..................................................
FD540192       --> ..................................................
EW717471       --> ..................................................
FD980000       --> ..................................................
EV549125       --> ..................................................
EX773814       --> ..................................................
FD937565       --> ..................................................
FD557482       --> ..................................................

               651    -    701
UN22916        --> GAAAACTTTGCATTCCACTCTCGACTCTAAGTCCTTCGAGTTCAAAGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533016       <-- ..................................................
FD967627       <-- ..................................................
EY926852       <-- ..................................................
FD553766       <-- ..................................................
EW721453       <-- ..................................................
EV545595       <-- ..................................................
EX777628       <-- ..................................................
FD975961       <-- ..................................................
FD577984       --> GAAAACTTTGCATTCCACTCTCGACTCTAAGTCCTTCGAGTTCAAAGATA
EX904227       --> GAAAACTTTGCATTCCACTCTCGACTCTAAGTCCTTCGAGTTCAAAGATA
FD954911       --> GAAAACTTTGCATTCCACTCTCGACTCTAAGTCCTTCGAGTTCAA-GATA
EX765824       --> GAAAACTTTGCATTCCACTCTCGACTCTAAGTCCTTCGAGTTCAAAGATA
FY442085       --> GAAAACTTTGCATTCCACTCTCGACTCTAAGTCCTTCGAGTTCAAAGATA
FD559255       --> GAAAACTTTGCATTCCACTCTCGACTCTAAGTCCTTCGAGTTCAAAGATA
FY447226       --> GAAAACTTTGCATTCCACTCTCGACTCTAAGTCCTTCGAGTTCAAAGATA
FD557726       --> GAAAACTTTGCATTCCACTCTCGACTCTAAGTCCTTCGAGTTCAAAGATA
EV550279       --> GAAAACTTTGCATTCCACTCTCGACTCTAAGTCCTTCGAGTTCAAAGATA
FD971505       --> GAAAACTTTGCATTCCACTCTCGACTCTAAGTCCTTCGAGTTCAAAGATA
EV529214       --> ..........gATTCCACCCTCGACTCTAAGTCCTTCGAGTTCAAAGATA
FD540192       --> ..................................................
EW717471       --> ..................................................
FD980000       --> ..................................................
EV549125       --> ..................................................
EX773814       --> ..................................................
FD937565       --> ..................................................
FD557482       --> ..................................................

               701    -    751
UN22916        --> TTGTCAAAATTGGAAGAACTCACACTCAAGATGCTACTCCTTTGACCCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533016       <-- ..................................................
FD967627       <-- ..................................................
EY926852       <-- ..................................................
FD553766       <-- ..................................................
EW721453       <-- ..................................................
EV545595       <-- ..................................................
EX777628       <-- ..................................................
FD975961       <-- ..................................................
FD577984       --> TTGTCAAAATTGGAAGA-CTCACACTCAAGATGCTACTCCTTTGACC...
EX904227       --> TTGT..............................................
FD954911       --> TTGTCAAA-TTGGAAGA-CTCACACTCAAGATGCTACTCCTTTGACC-TA
EX765824       --> TTGTCAAA-TTGGGAGA-CTCACACTCAAGATGCTACTCCTTTGACC...
FY442085       --> TTGTCAAAATTGGAAGAACTCACACTCAAGATGCTACTCCTTTGACCCTA
FD559255       --> TTGTCAAAATTGGAAGAACTCACACTCAAGATGCTACTCCTTTGACCCTA
FY447226       --> TTGTCAAAATTGGAAGAACTCACACTCAAGATGCTACTCCTTTGACCCTA
FD557726       --> TTGTCAAAATTGGAAGAACTCACACTCAAGATGCTACTCCTTTGACCCTA
EV550279       --> TTGTCAAAATTGGAAGAACTCACACTCAAGATGCTACTCCTTTGACCCTA
FD971505       --> TTGTCAAAATTGGAAGAACTCACACTCAAGATGCTACTCCTTTGACCCTT
EV529214       --> TTGTCAAAATTGGAAGAACTCACACTCAAGATGCTACTCCTTTGACCCTA
FD540192       --> ..................................................
EW717471       --> ..................................................
FD980000       --> ..................................................
EV549125       --> ..................................................
EX773814       --> ..................................................
FD937565       --> ..................................................
FD557482       --> ..................................................

               751    -    801
UN22916        --> GGACAAGAATTTGGTGGCTATGCTACTCAAGTTAAGTATGGACTTAATCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533016       <-- ..................................................
FD967627       <-- ..................................................
EY926852       <-- ..................................................
FD553766       <-- ..................................................
EW721453       <-- ..................................................
EV545595       <-- ..................................................
EX777628       <-- ..................................................
FD975961       <-- ..................................................
FD577984       --> ..................................................
EX904227       --> ..................................................
FD954911       --> GGACAAGAATTTGGTGGCTATGCTA.........................
EX765824       --> ..................................................
FY442085       --> GGACAAGAATTTGGTGGCTATGCTACTCAAGTTAAGTATGGACTTAATCG
FD559255       --> GGACAAGAATTTGGTGGCTATGCTACTCAAGTTAAGTATGGACTTAATCG
FY447226       --> GGACAAGAATTTGGTGGCTATGCTACTCAAGTTAAGTATGGACTTAATCG
FD557726       --> GGACAAGAATTTGGTGGCTATGCTACTCAAGTTAAGTATGGACTTAATCG
EV550279       --> GGACAAGAATTTGGTGGCTATGCTACTCAAGTTAAGTATGGACTTAATCG
FD971505       --> GGACAAGAATTTGGTGGCTATGCTACTCAAGTTAAGTATGGGCTTAATCG
EV529214       --> GGACAAGAATTTGGTGGCTATGCTACTCAAGTTAAGTATGGACTTAATCG
FD540192       --> ..................................................
EW717471       --> ..................................................
FD980000       --> ..................................................
EV549125       --> ..................................................
EX773814       --> ..................................................
FD937565       --> ..................................................
FD557482       --> ..................................................

               801    -    851
UN22916        --> AGTCACATGCACTCTACCCCGCCTCTATCAGCTTGCACAAGGTGGAACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533016       <-- ............................CAGCTTGCACAAGGTGGAACTG  Raphanus raphanistrum subsp. maritimus
FD967627       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY926852       <-- ..................................................  Raphanus sativus var. oleiformis
FD553766       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW721453       <-- ..................................................  Raphanus sativus var. oleiformis
EV545595       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777628       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD975961       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD577984       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX904227       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD954911       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX765824       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY442085       --> AGTCACATGCACTCTACCCCGCCTCTATCAGCTTGCACAAGGTGGAACTG  Raphanus sativus cv GSK3-1
FD559255       --> AGTCACATGTACTCTACCCCGCCTCTATCAGCTTGCACAAGGTGGAACTG  Raphanus raphanistrum subsp. landra
FY447226       --> AGTCACATGCACTCTACCCCGCCTCTATCAGCTTGCACAAGGTGGAACTG  Raphanus sativus cv GSK3-1
FD557726       --> AGTCACATGTACTCTACCCCGCCTCTATCAGCTTGCACAAGGTGGAACTG  Raphanus raphanistrum subsp. landra
EV550279       --> AGTCACATGCACTCTACCCCGCCTCTATCAGCTTGCACAAGGTGGAACTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD971505       --> AGTCACATGTACTCTACCCCGCCTCTATCAGCTTGCACAAGGTGGAACTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV529214       --> AGTCACATGCACTCTACCCCGCCTCTATCAGCTTGCACAAGGTGGAACTG  Raphanus raphanistrum subsp. maritimus
FD540192       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717471       --> ..................................................  Raphanus sativus var. oleiformis
FD980000       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV549125       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX773814       --> ..................................................  Raphanus raphanistrum subsp. landra
FD937565       --> ..................................................  Raphanus sativus var. oleiformis
FD557482       --> ..................................................  Raphanus raphanistrum subsp. landra

               851    -    901
UN22916        --> CTGTTGGGACAGGACTAAACACCAAGAAAGGGTTTGATGTAAAGATAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533016       <-- CTGTTGGGACAGGACTAAACACCAAGAAAGGGTTTGATGTAAAGATAGCT
FD967627       <-- ..................................................
EY926852       <-- ..................................................
FD553766       <-- ..................................................
EW721453       <-- ..................................................
EV545595       <-- ..................................................
EX777628       <-- ..................................................
FD975961       <-- ..................................................
FD577984       --> ..................................................
EX904227       --> ..................................................
FD954911       --> ..................................................
EX765824       --> ..................................................
FY442085       --> CTGTTGGGACAGGACTAAACACCAAGAAAGGGTTTGATGTAAAGATAGCT
FD559255       --> CTGTTGGGACAGGACTAAACACCAAGAAAGGGTTTGATGTAAAGATAGCT
FY447226       --> CTGTTGGGACAGGACTAAACACCAAGAAAGGGTTTGATGTAAAGATAGCT
FD557726       --> CTGTTGGGACAGGACTAAACACCAAGAAAGGGTTTGATGTAAAGATAGCT
EV550279       --> CTGTTGGGACAGGACTAAACACCAAGAAAGGGTTTGATGTAAAGATAGCT
FD971505       --> CTGTTGGGACAGGACTAAACACCAAGAAAGGGTTTGATGTAAAGATAGCT
EV529214       --> CTGTTGGGACAGGACTAAACACCAAGAAAGGGTTTGATGTAAAGATAGCT
FD540192       --> ..................................................
EW717471       --> ..................................................
FD980000       --> ..................................................
EV549125       --> ..................................................
EX773814       --> ..................................................
FD937565       --> ..................................................
FD557482       --> ..................................................

               901    -    951
UN22916        --> GCTGCAGTGGCAGAAGAAACAAACCTGCCGTTCGTCACTGCAGAAAACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533016       <-- GCTGCAGTGGCAGAAGAAACAAACCTGCCGTTCGTCACTGCAGAAAACAA
FD967627       <-- ..................................................
EY926852       <-- ..................................................
FD553766       <-- ..................................................
EW721453       <-- ..................................................
EV545595       <-- ..................................................
EX777628       <-- ..................................................
FD975961       <-- ..................................................
FD577984       --> ..................................................
EX904227       --> ..................................................
FD954911       --> ..................................................
EX765824       --> ..................................................
FY442085       --> GCTGCAGTGGCA......................................
FD559255       --> GCTGCAGTGGCAGAAGAAACAAACCTGCCGTTCGTCACTGCAGAAA-CAA
FY447226       --> GCTGCAGTGGCAGAAGAAACAAACCTGCCGTTCGTCACTGC.........
FD557726       --> GCTGCAGTGGCAGAAGAAACAAACCTGCCGTTCGTCACTGCAGAAAACAA
EV550279       --> GCTGCAGTGGCAGAAGAAACAAACCTGCCCTTCGTCACTGCAGAAAACAA
FD971505       --> GCTGCAGTGGCAGAAGAAACAAACCTGCCGTTCGTCACTGCAGAAAACAA
EV529214       --> GCTGCAGTGGCAGAAGAAACAAACCTGCCGTTCGTCACTGCAGAAAACAA
FD540192       --> ....................gAACCTGCCGTTCGTCACTGCAGAAAACAA
EW717471       --> ..................................................
FD980000       --> ..................................................
EV549125       --> ..................................................
EX773814       --> ..................................................
FD937565       --> ..................................................
FD557482       --> ..................................................

               951    -   1001
UN22916        --> GTTCGAAGCTCTGGCTGCACACGATGCTTGTGTTGAAACCAGTGGGTCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533016       <-- GTTCGAAGCTCTGGCTGCACACGATGCTTGTGTTGAAACCAGTGGGTCAC
FD967627       <-- ........CTCTGGCTGCACACGATGCTTGTGT-GAAACCAGTGGGTCAC
EY926852       <-- ..................................................
FD553766       <-- ..................................................
EW721453       <-- ..................................................
EV545595       <-- ..................................................
EX777628       <-- ..................................................
FD975961       <-- ..................................................
FD577984       --> ..................................................
EX904227       --> ..................................................
FD954911       --> ..................................................
EX765824       --> ..................................................
FY442085       --> ..................................................
FD559255       --> GTTCGAAGCTCTGGCTGCACACGATGCTTGTGTTGAAACCAGTGGGTCAC
FY447226       --> ..................................................
FD557726       --> GTTCGAAGCTCTGGCTGCACACGATGCTTGTGTTGAAACCAGTGGGTCAC
EV550279       --> GTTCGAAGCTCTGGCTGCACACGATGCTTGTGTTGAAACCAGTGGGTCAC
FD971505       --> GTTCGAAGCTCTGGCTGCACACGATGCTTGTGTTGAAACCAGTGGGTCAC
EV529214       --> GTTCGAAGCTCTGGCTGCACACGATGCTTGTGTTGAAACCAGTGGGTCAC
FD540192       --> GTTCGAAGCTCTGGCTGCACATGATGCTTGTGTTGAAACCAGTGGGTCAC
EW717471       --> ..................................................
FD980000       --> ..................................................
EV549125       --> ..................................................
EX773814       --> ..................................................
FD937565       --> ..................................................
FD557482       --> ..................................................

               1001   -   1051
UN22916        --> TTAACACAATCGCCACGTCGTTGATGAAAATTGCCAATGATATACGTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533016       <-- TTAACACAATCGCCACGTCGTTGATGAAAATTGCCAATGATATACGTTTT
FD967627       <-- TTAACACAATCGCCACGTCGTTGATGAAAATTGCCAATGATATCCGTTTT
EY926852       <-- ..................................................
FD553766       <-- ..................................................
EW721453       <-- ..................................................
EV545595       <-- ..................................................
EX777628       <-- ..................................................
FD975961       <-- ..................................................
FD577984       --> ..................................................
EX904227       --> ..................................................
FD954911       --> ..................................................
EX765824       --> ..................................................
FY442085       --> ..................................................
FD559255       --> TTAA..............................................
FY447226       --> ..................................................
FD557726       --> TTAACACAATCGCCACGTCGTTGATTAAAAa...................
EV550279       --> TTAACACAATCGCCACGTCGTTGATGAAAATTGCCAATGATATACGTTTT
FD971505       --> TTAACACAATCGCCACGTCGTTGATGAAAATTGCCAATGATATCCGTTTT
EV529214       --> TTAACACAATCGCCACGTCGTTGATGAAAATTGCCAATGATATACGTTTT
FD540192       --> TTAACACAATCGCCACGTCGTTGATGAAAATTGCCAATGATATACGTTTT
EW717471       --> ..........gGCCACGTCGTTGATGAAAATTGCCAATGATATACGTTTT
FD980000       --> .............................gTTGCCAATGATATACGTTTT
EV549125       --> ..................................................
EX773814       --> ..................................................
FD937565       --> ..................................................
FD557482       --> ..................................................

               1051   -   1101
UN22916        --> CTTGGAAGTGGTCCAAGATGTGGTCTTGGTGAACTTGTTCTGCCTGAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533016       <-- CTTGGAAGTGGTCCAAGATGTGGTCTTGGTGAACTTGTTCTGCCTGAAAA
FD967627       <-- CTTGGAAGTGGTCCAAGATGTGGTCTTGGTGAACTTGTTCTGCCTGAAAA
EY926852       <-- ..............................GAACTTGTTCTGCCTGAAAA
FD553766       <-- ............................................TGAAAA
EW721453       <-- ..................................................
EV545595       <-- ..................................................
EX777628       <-- ..................................................
FD975961       <-- ..................................................
FD577984       --> ..................................................
EX904227       --> ..................................................
FD954911       --> ..................................................
EX765824       --> ..................................................
FY442085       --> ..................................................
FD559255       --> ..................................................
FY447226       --> ..................................................
FD557726       --> ..................................................
EV550279       --> CTTGGAAGTGGTCCAAGATGTGGTCTTGGTGAACTTGTTCTGCCTGAAA-
FD971505       --> CTTGGAAGTGGTCCAAGATGTGGTCTTGGTGAACTTGTTCTGCCTGAAAA
EV529214       --> CTTGGAAGTGGTCCAAGATGTGGTCTTGGTGAACTTGTTCTGCCTGAAAA
FD540192       --> CTTGGAAGTGGTCCAAGATGTGGTCTTGGTGAACTTGTTCTGCCTGAAAA
EW717471       --> CTTGGAAGTGGTCCAAGATGTGGTCTTGGTGAACTTGTTCTGCCTGAAAA
FD980000       --> CTTGGAAGTGGTCCAAGATGTGGTCTTGGTGAACTTGTTCTGCCTGAAAA
EV549125       --> ....GAAGTGGTCCAAGATGTGGTCTTGGTGAACTTGTTCTGCCTGAAAA
EX773814       --> .............................gGAACTTGTTCTGCCTGAAAA
FD937565       --> ..................................................
FD557482       --> ..................................................

               1101   -   1151
UN22916        --> TGAGCCAGGAAGCAGCATCATGCCTGGGAAGGTAAATCCTACACAGTGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533016       <-- TGAGCCAGGAAGCAGCATCATGCCTGGGAAGGTAAATCCTACACAGTGTG  Raphanus raphanistrum subsp. maritimus
FD967627       <-- TGAGCCAGGAAGCAGCATCATGCCTGGGAAGGTAAATCCTACACAGTGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY926852       <-- TGAGCCAGGAAGCAGCATCATGCCTGGGAAGGTGAATCCTACACAGTGTG  Raphanus sativus var. oleiformis
FD553766       <-- TGAGCCAGGAAGCAGCATCATGCCTGGGAAGGTAAATCCTACACAGTGTG  Raphanus raphanistrum subsp. landra
EW721453       <-- ...................................acCCTACACAGTGTG  Raphanus sativus var. oleiformis
EV545595       <-- ..........................................ACAGTGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777628       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD975961       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD577984       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX904227       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD954911       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX765824       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY442085       --> ..................................................  Raphanus sativus cv GSK3-1
FD559255       --> ..................................................  Raphanus raphanistrum subsp. landra
FY447226       --> ..................................................  Raphanus sativus cv GSK3-1
FD557726       --> ..................................................  Raphanus raphanistrum subsp. landra
EV550279       --> TGAGCCAGGAAGCAGCATCATGCCTGGGAAGGTGAATCCTACACAGTGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD971505       --> TGAGCCAGGAAGCAGCATCATGCCTGGGAAGGTAAATCCTACACAGTGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV529214       --> TGAGCCAGGAAGCAGCATCATGCCTGGGAAGGTAAATCCTACACAGTGTG  Raphanus raphanistrum subsp. maritimus
FD540192       --> TGAGCCAGGAAGCAGCATCATGCCTGGGAAGG-AAATCCTACACAGTGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717471       --> TGAGCCAGGAAGCAGCATCATGCCTGGGAAGGTGAACCCTACACAGTGTG  Raphanus sativus var. oleiformis
FD980000       --> TGAGCCAGGAAGCAGCATCATGCCTGGGAAGGTGAATCCTACACAGTGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV549125       --> TGAGCCAGGAAGCAGCATCATGCCTGGGAAGGTAAATCCTACACAGTGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX773814       --> TGAGCCAGGAAGCAGCATCATGCCTGGGAAGGTAAATCCTACACAGTGTG  Raphanus raphanistrum subsp. landra
FD937565       --> ..................................................  Raphanus sativus var. oleiformis
FD557482       --> ..................................................  Raphanus raphanistrum subsp. landra

               1151   -   1201
UN22916        --> AGGCCTTGACCATGGTTTGTGCTCAGGTAATGGGCAACCATGTCGCTGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533016       <-- AAGCCTTGACCATGGTTTGTGCTCAGGTAATGGGCAACCATGTCGCTGTG
FD967627       <-- AGGCCTTGACCATGGTTTGTGCTCAGGTAATGGGCAACCATGTCGCTGTG
EY926852       <-- AGGCCTTGACCATGGTTTGTGCTAAGGTAATGGGCAACCATGTCGCTGTG
FD553766       <-- AGGCCTTGACCATGGTTTGTGCTCAGGTAATAGGCAACCATGTCGCTGTG
EW721453       <-- AGGCCTTGACCATGGTTTGTGCTCAGGTAATGGGCAACCATGTCGCTGTG
EV545595       <-- AGGCCTTGACCATGGTTTGTGCTCAGGTAATGGGCAACCATGTCGCTGTG
EX777628       <-- ........ACCATGGTTTGTGCTCAGGTAATGGGCAACCATGTCGCTGTG
FD975961       <-- ..................................................
FD577984       --> ..................................................
EX904227       --> ..................................................
FD954911       --> ..................................................
EX765824       --> ..................................................
FY442085       --> ..................................................
FD559255       --> ..................................................
FY447226       --> ..................................................
FD557726       --> ..................................................
EV550279       --> AGGCCTTGACCATGGTTTGTGCTCAGGTAATGGGCAACCATGTCGCTGTG
FD971505       --> AGGCCTTGACCATGGTTTGTGCTCAG-TAATGGGCAACCATGTCGCTGTG
EV529214       --> AAGCCTTGACCATGGTTTGTGCTCAGGTAATGGGCAACCATGTCGCTGTG
FD540192       --> AGG-TTTGACCATGG...................................
EW717471       --> AGGCCTTGACCATGGTTTGTGCTCAGGTAATGGGCAACCATGTCGCTGTG
FD980000       --> AGGCCTTGACCATGGTTTGTGCTCAGGTAATGGGCAACCATGTCGCTGTG
EV549125       --> AGGCCTTGACCATGGTTTGTGCTCAGGTAATGGGCAACCATGTCGCTGTG
EX773814       --> AGGCCTTGACCATGGTTTGTGCTCAGGTAATGGGCAACCATGTCGCTGTG
FD937565       --> .......................CAGGTAATGGGCAACCATGTCGCTGTG
FD557482       --> ..................................................

               1201   -   1251
UN22916        --> ACAGTTGGTGGGTCAAATGGTCATTTCGAATTGAATGTATTTAAGCCGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533016       <-- ACAGTTGGTGGGTCAAATGGTCATTTCGAATTGAATGTATTTAAGCCGGT
FD967627       <-- ACAGTTGGTGGGTCAAATGGTCATTTCGAATTGAATGTATTTAAGCCGGC
EY926852       <-- ACAGTTGGTGGGTCAAATGGTCATTTCGAATTGAATGTATTTAAGCCGGT
FD553766       <-- ACAGTTGGTGGGTCAAATGGTCATTTCGAATTGAATGTATTTAAGCCGGT
EW721453       <-- ACAGTTGGTGGGTCAAATGGTCATTTCGAATTGAATGTATTTAAGCCGGT
EV545595       <-- ACAGTTGGTGGGTCAAATGGTCATTTCGAATTGAATGTATTTAAGCCGGT
EX777628       <-- ACAGTTGGTGGGTCAAATGGTCATTTCGAATTGAATGTATTTAAGCCGGT
FD975961       <-- ..................................................
FD577984       --> ..................................................
EX904227       --> ..................................................
FD954911       --> ..................................................
EX765824       --> ..................................................
FY442085       --> ..................................................
FD559255       --> ..................................................
FY447226       --> ..................................................
FD557726       --> ..................................................
EV550279       --> ACAGTTGGTGGGTC....................................
FD971505       --> ACAGTTGGTGGGTCAAATGGTCATTTCGAATTGA-TGTATTTAAGCCGGC
EV529214       --> ACAGTTGGTGGGTCAAATGGTCATTTCGAATTGAATGTATTTAAGCCGGT
FD540192       --> ..................................................
EW717471       --> ACAGTTGGTGGGTCAAATGGTCATTTCGAATTGAATGTATTTAAGCCGGT
FD980000       --> ACAGTAGGTGGGTCAAATGGTCATTTCGAATTGAATGTATTTAAGCCGGT
EV549125       --> ACAGTTGGTGGGTCAAATGGTCATTTCGAATTGAATGTATTTAAGCCGGT
EX773814       --> ACAGTTGGTGGGTCAAATGGTCATTTCGAATTGAATGTATTTAAGCCGGT
FD937565       --> ACAGTTGGTGGGTCAAATGGTCATTTCGAATTGAATGTATTTAAGCCGGT
FD557482       --> ..................................................

               1251   -   1301
UN22916        --> GATCGCAAGCTCTCTCTTGCATTCCGTAAGATTGATAGCAGATGCTTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533016       <-- GATCGCAAGCTCTCTCTTGCATTCCGTAAGATTGATAGCAGATGCTTCAG  Raphanus raphanistrum subsp. maritimus
FD967627       <-- GATCGCAAGCTCTCTCTTGCATTCCGTAAGATTGATAGCAGATGCTTCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY926852       <-- GATCGCAAGCTCTCTCTTGCATTCTGTAAGATTGATAGCAGATGCTTCAG  Raphanus sativus var. oleiformis
FD553766       <-- GATCGCAAGCTCTCTCTTGCATTCCGTAAGATTGATAGCAGATGCTTCAG  Raphanus raphanistrum subsp. landra
EW721453       <-- GATCGCAAGCTCTCTCTTGCATTCTGTAAGATTGATAGCAGATGCTTCAG  Raphanus sativus var. oleiformis
EV545595       <-- GATCGCAAGCTCTCTCTTGCATTCTGTAAGATTGATAGCAGATGCTTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777628       <-- GATCGCAAGCTCTCTCTTGCATTCCGTAAGATTGATAGCAGGTGCTTCAG  Raphanus raphanistrum subsp. landra
FD975961       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD577984       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX904227       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD954911       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX765824       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY442085       --> ..................................................  Raphanus sativus cv GSK3-1
FD559255       --> ..................................................  Raphanus raphanistrum subsp. landra
FY447226       --> ..................................................  Raphanus sativus cv GSK3-1
FD557726       --> ..................................................  Raphanus raphanistrum subsp. landra
EV550279       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD971505       --> GAT...............................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV529214       --> GATCGCAAGCTCTCTCTTGCATTCCGTAAGATTGATAGCAGATGCTTCAG  Raphanus raphanistrum subsp. maritimus
FD540192       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717471       --> GATCGCAAGCTCTCTCTTGCATTCTGTAAGATTGATAGCAGATGCTTCAG  Raphanus sativus var. oleiformis
FD980000       --> GATCGCAAGCTCTCTCTTGCATTCTGTAAGATTGATAGCAGATGCTTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV549125       --> GATCGCAAGCTCTCTCTTGCATTCCGTAAGATTGATAGCAGATGCTTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX773814       --> GATCGCAAGCTCTCTCTTGCATTCCGTAAGATTGATAGCAGGTGCTTCAG  Raphanus raphanistrum subsp. landra
FD937565       --> GATCGCAAGCTCTCTCTTGCATTCTGTAAGATTGATAGCAGATGCTTCAG  Raphanus sativus var. oleiformis
FD557482       --> ..................................................  Raphanus raphanistrum subsp. landra

               1301   -   1351
UN22916        --> CTTCGTTTGAGAAAAACTGTGTGAGGGGCATTGAGGCCAACAGAGAAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533016       <-- CTTCGTTTGAGAAAAACTGTGTGAGGGGCATTGAGGCCAACAGAGAAAGG  Raphanus raphanistrum subsp. maritimus
FD967627       <-- CTTCTTTTGAGAAAAACTGTGTGAGGGGCATTGAGGCCAACAGAGAAAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY926852       <-- CTTCGTTTGAGAAAAACTGTGTGAGGGGCATTGAGGCCAACAAAGAAAGG  Raphanus sativus var. oleiformis
FD553766       <-- CTTCGTTTGAGAAAAACTGTGTGAGGGGCATTGAGGCCAACAGAGAAAGG  Raphanus raphanistrum subsp. landra
EW721453       <-- CTTCGTTTGAGAAAAACTGTGTGAGGGGCATTGAGGCCAACAAAGAAAGG  Raphanus sativus var. oleiformis
EV545595       <-- CTTCGTTTGAGAAAAACTGTGTGAGGGGCATTGAGGCCAACAAAGAAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777628       <-- CTTCGTTTGAGAAAAACTGTGTGAGGGGCATTGAGGCCAACAGAGAAAGG  Raphanus raphanistrum subsp. landra
FD975961       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD577984       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX904227       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD954911       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX765824       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY442085       --> ..................................................  Raphanus sativus cv GSK3-1
FD559255       --> ..................................................  Raphanus raphanistrum subsp. landra
FY447226       --> ..................................................  Raphanus sativus cv GSK3-1
FD557726       --> ..................................................  Raphanus raphanistrum subsp. landra
EV550279       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD971505       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV529214       --> CTTCGTTTGAGAAAAACTGTGTGAGGGGCATTGAGGCCAACAGAGAAAGG  Raphanus raphanistrum subsp. maritimus
FD540192       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717471       --> CTTCGTTTGAGAAAAACTGTGTGAGGGGCATTGAGGCCAACAAAGAAAGG  Raphanus sativus var. oleiformis
FD980000       --> CTTCGTTTGAGAAAAACTGTGTGAGGGGCATTGAGGCCAACAAAGAAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV549125       --> CTTCGTTTGAGAAAAACTGTGTGAGGGGCATTGAGGCCAACAGAGAAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX773814       --> CTTCGTTTGAGAAAAACTGTGTGAGGGGCATTGAGGCCAACAGAGA....  Raphanus raphanistrum subsp. landra
FD937565       --> CTTCGTTTGAGAAAAACTGTGTGAGGGGCATTGAGGCCAACAAAGAAAGG  Raphanus sativus var. oleiformis
FD557482       --> .......................gGGGGCATTGAGGCCAACAGAGAAAGG  Raphanus raphanistrum subsp. landra

               1351   -   1401
UN22916        --> ATCTCAAAGCTATTACACGAGTCTCTTATGCTTGTGACATCATTGAATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533016       <-- ATCTCAAAGCTATTACACGAGTCTCTTATGCTTGTGACATCATTGAATCC
FD967627       <-- ATCTCAAAGCTATTACACGAGTTTCTTATGCTTGTGACATCATTGAATCC
EY926852       <-- ATCTCAAAGCTATTACACGAGTCTCTTATGCTTGTGACATCATTGAATCC
FD553766       <-- ATCTCAAAGCTATTACACGAGTCTCTTATGCTTGTGACATCATTGAATCC
EW721453       <-- ATCTCAAAGCTATTACACGAGTTTCTTATGCTTGTGACATCATTGAATCC
EV545595       <-- ATCTCAAAGCTATTACACGAGTCTCTTATGCTTGTGACATCATTGAATCC
EX777628       <-- ATCTCAAAGCTATTACACGAGTCTCTTATGCTTGTGACATCATTGAATCC
FD975961       <-- ..................................................
FD577984       --> ..................................................
EX904227       --> ..................................................
FD954911       --> ..................................................
EX765824       --> ..................................................
FY442085       --> ..................................................
FD559255       --> ..................................................
FY447226       --> ..................................................
FD557726       --> ..................................................
EV550279       --> ..................................................
FD971505       --> ..................................................
EV529214       --> ATCTCAAAGCTATTACACGAGTCTCTTATGCTTGTGACATCATTGAATCC
FD540192       --> ..................................................
EW717471       --> ATCTCAAAGCTATTACACGAGTCTCTTATGCTTGTGACATCATTGAATCC
FD980000       --> ATCTCAAAGCTATTACACGAGTCTCTTATGCTTGTGACATCATTGAATCC
EV549125       --> ATCTCAAAGCTATTACACGAGTCTCTTATGCTTGTGACATCATTGAATCC
EX773814       --> ..................................................
FD937565       --> ATCTCAAAGCTATTACACGAGTCTCTTATGCTTGTGACATCATTGAATCC
FD557482       --> ATCTCAAAGCTATTACACGAGTCTCTT-TGCTTGTGACATCATTGAATCC

               1401   -   1451
UN22916        --> GAAAATCGGATATGACAATGCTGCAGCAGTTGCCAAGAAAGCTCACAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533016       <-- GAAAATCGGATATGACAATGCTGCAGCAGTTGCCAAGAAAGCTCACAAAG
FD967627       <-- GAAAATCGGATATGACAATGCTGCAGCAGTTGCCAAGAAAGCTCACAAAG
EY926852       <-- GAAAATCGGATATGACAATGCTGCAGCAGTTGCCAAGAAAGCTCACAAAG
FD553766       <-- GAAAATCGGATATGACAATGCTGCAGCAGTTGCCAAGAAAGCTCACAAAG
EW721453       <-- GAAAATCGGATATGACAATGCTGCAGCAGTTGCCAAGAAAGCTCACAAAG
EV545595       <-- GAAAATCGGATATGACAATGCTGCAGCAGTTGCCAAGAAAGCTCACAAAG
EX777628       <-- GAAAATCGGATATGACAATGCTGCAGCAGTTGCCAAGAAAGCTCACAAAG
FD975961       <-- ..................................................
FD577984       --> ..................................................
EX904227       --> ..................................................
FD954911       --> ..................................................
EX765824       --> ..................................................
FY442085       --> ..................................................
FD559255       --> ..................................................
FY447226       --> ..................................................
FD557726       --> ..................................................
EV550279       --> ..................................................
FD971505       --> ..................................................
EV529214       --> GAAAATCGGATATGACAATGCTGCAGCAGTTGCCAAGAAAGCTCACAAAG
FD540192       --> ..................................................
EW717471       --> GAAAATCGGATATGACAATGCTGCAGCAGTTGCCAAGAAAGCTCACAAAG
FD980000       --> GAAAATCGGATATGACAATGCTGCAGCAGTTGCCAAGAAATCTCACAAAG
EV549125       --> GAAAATCGGATATGACAATGCTGCAGCAGTTGCCAAGAAAGCTCACAAAG
EX773814       --> ..................................................
FD937565       --> GAAAATCGGATATGACAATGCTGCAGCAGTTGCCAAGAAAGCTCACAAAG
FD557482       --> GAAAATCGGATATGACAATGCTGCAGCAGTTGCCAAGAAAGCTCACAAAG

               1451   -   1501
UN22916        --> AAGGATCGACATTGAAGGAAGCGGCTCTGAAGTTAGGTGTTCTTACCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533016       <-- AAGGATCGACATTGAAGGAAGCGGCTCTGAAGTTAGGTGTTCTTACCTCT
FD967627       <-- AAGGATCGACATTGAAGGAAGCGGCTCTGAAGTTAGGTGTTCTTACCTCT
EY926852       <-- AAGGATCGACATTGAAGGAAGCGGCTCTGAAGTTAGGTGTTCTTACCTCT
FD553766       <-- AAGGATCGACATTGAAGGAAGCGGCTCTGAAGTTAGGTGTTCTTACCTCT
EW721453       <-- GAGGATCGACATTGAAGGAAGCGGCTCTGAAGTTAGGTGTTTTTACCTTT
EV545595       <-- AAGGATCGACATTGAAGGAAGCGGCTCTGAAGTTAGGTGCTCTTACCTCT
EX777628       <-- AAGGATCGACATTGAAGGAAGCGGCTCTGAAGTTAGGTGTTCTTACCTCT
FD975961       <-- ..................................................
FD577984       --> ..................................................
EX904227       --> ..................................................
FD954911       --> ..................................................
EX765824       --> ..................................................
FY442085       --> ..................................................
FD559255       --> ..................................................
FY447226       --> ..................................................
FD557726       --> ..................................................
EV550279       --> ..................................................
FD971505       --> ..................................................
EV529214       --> AAG-ATCGACATT.....................................
FD540192       --> ..................................................
EW717471       --> GAGGATCGACATTGAAGGAAGCGGCTCTGAAGTTAGGTGTTCTTACCTCT
FD980000       --> AAGGATCGACATTGAAGGAAGCGGCTCTGAAGTTAGGTGTTCTTACCTCT
EV549125       --> AAGGATCGACATTAAAGGAAGCGGCTCTGAAGTTAGGTGTTCTTACCTCT
EX773814       --> ..................................................
FD937565       --> AAGGATCGACATTGAAGGAAGCGGCTCTGAAGTTAGGTGTTCTTACCTCT
FD557482       --> AAGGATCGACATTGAAGGAAGCGTCTCTGAAGTTAGGTGTTCTTACCTCT

               1501   -   1551
UN22916        --> GAAGAGTTTGATACGCTTGTCGTCCCCGAGAAGATGATCGGGCCCTCCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533016       <-- GAAGAGTTTGATACGCTTGTCGTCCCAGAGAAGATGATCGGGCCCTCCGA
FD967627       <-- GAAGAGTTTGATACGCTTGTCGTCCCAGAGAAGATGATCGGGCCCTCCGA
EY926852       <-- GAAGAGTTTGATACGCTTGTCGTTCCCGAGAAGATGATCGGGCCCTCCGA
FD553766       <-- GAAGAGTTTGATACGCTTGTCGTCCCCGAGAAGATGATCGGGCCCTCCGA
EW721453       <-- GAAGAGTTTGATACGCTTGTCGTCCCCGAGAAGATGATCGGGCCCTCCGA
EV545595       <-- GAAGAGTTTGATACGCTTGTCGTCCCCGAGAAGATGATCGGGCCCTCCGA
EX777628       <-- GAAGAGTTTGATACGCTTGTCGTCCCCGAGAAGATGATCGGGCCCTCCGA
FD975961       <-- .......................CCCCGAGAAGATGATCGGGCCCTCCGA
FD577984       --> ..................................................
EX904227       --> ..................................................
FD954911       --> ..................................................
EX765824       --> ..................................................
FY442085       --> ..................................................
FD559255       --> ..................................................
FY447226       --> ..................................................
FD557726       --> ..................................................
EV550279       --> ..................................................
FD971505       --> ..................................................
EV529214       --> ..................................................
FD540192       --> ..................................................
EW717471       --> GAAGAGTTTGATACGCTTGTCGTCCCCGAGAAGATGATCGGGCCCTCCGA
FD980000       --> GAAGAGTTTGATACGCTTGTCGTCCCCGAGAAGATGATCGGGCCCTCCGA
EV549125       --> GAAGAGTTTGATACGCTTGTCGTCCCCGAGAAGATGATCGGGCCCTCCGA
EX773814       --> ..................................................
FD937565       --> GAAGAGTTTGATACGCTTGTCGTCCCCGAGAAGATGATCGGGCCCTCCGA
FD557482       --> GAAGAGTTTGATACGCTTGTCGTCCCCGAGAAGATGATCGGGCCCTCCGA

               1551   -   1601
UN22916        --> TTGATGTT-GAGCTAAAAGCTTCATTTCACATGTCTTATTCTTGTTAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533016       <-- TTGATGTT-GAGCTAAAAGCTTCATTTCACATGTCTTATTCTTGTTAAGG
FD967627       <-- TTGATGTT-GAGCTAAAAGCTTCATTTCACATGTCTTATTCTTGTTAAGG
EY926852       <-- TTGATGTT-GAGCTAAAAGCTTCATTTCACATGTCTTATTCTTGTTAAGG
FD553766       <-- TTGATGTT-GAGCTAAAAGCTTCATTTCACATGTCTTATTCTTGTTAAGG
EW721453       <-- TTGATGTT-GAGCTAAAAGCTTCATTTCACATGTCTTATTCTTGTTAAGG
EV545595       <-- TTGATGTT-GAGCTAAAAGCTTCATTTCACATGTCTTATTCTTGTTAAGG
EX777628       <-- TTGATGTT-GAGCTAAAAGCTTCATTTCACATGTCTTATTCTTGTTAAGG
FD975961       <-- TTGATGTT-GGGCTAAAAGCTTCATTTCACATGTTTTATTTTTGTTAAGG
FD577984       --> ..................................................
EX904227       --> ..................................................
FD954911       --> ..................................................
EX765824       --> ..................................................
FY442085       --> ..................................................
FD559255       --> ..................................................
FY447226       --> ..................................................
FD557726       --> ..................................................
EV550279       --> ..................................................
FD971505       --> ..................................................
EV529214       --> ..................................................
FD540192       --> ..................................................
EW717471       --> TTGATGTT-GAGCTAAAAGCTTCATTTCACATGTCTTATTCTTGTTAAG.
FD980000       --> TTGATGTT-GGGCTAAAAGCTTCATTTCACATGTCTTATTCTTGTTAAGG
EV549125       --> TTGATGTTTGAGCTAAAAGCCTCATTTCACATGTCTTATTCTTGTTAAGG
EX773814       --> ..................................................
FD937565       --> TTGATGTT-GAGCTAAAAGCTTCATTTCACATGTCTTATTCTTGTTAAGG
FD557482       --> TTGATGTT-GAGCTAAAAGCTTCATTTCACATGTCTTATTCTTGTTAAGG

               1601   -   1651
UN22916        --> GTGTAATGACAAATAAGCAAATCCCAGAAACTCAAATTCAGATTTTGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533016       <-- TTGTAATGACAAATAAGCAAATCCC-GAAACTCAAATTCAGATTTTGCAT
FD967627       <-- TTGTGATGACAAATAAGCAAATCCC-GAAACTCAAATTCAGATTTTGCAT
EY926852       <-- GTGTAATGACAAATAAACAAATCCCAGAAACTCAAATTCAGATTTTGCAT
FD553766       <-- GTGTAATGACAAATAAGCAAATCCCAGAAACTCAAATTCAGATTTTGCAT
EW721453       <-- GTGTAATGACAAATAAGCAAATCCCAGAAACTCAAATTCAGATTTTGCAT
EV545595       <-- GTGTAATGACAAATAAGCAAATCCCAGAAACTCAAATTCAGATTTTGCAT
EX777628       <-- GTGTAATGACAAATAAGCAAATCCCAGAAACTCAAATTCAGATTTTGCAT
FD975961       <-- GTGTAATGACAAATAAGCAAATCCCAGAAACTTAAATTCAGATTTTGCAT
FD577984       --> ..................................................
EX904227       --> ..................................................
FD954911       --> ..................................................
EX765824       --> ..................................................
FY442085       --> ..................................................
FD559255       --> ..................................................
FY447226       --> ..................................................
FD557726       --> ..................................................
EV550279       --> ..................................................
FD971505       --> ..................................................
EV529214       --> ..................................................
FD540192       --> ..................................................
EW717471       --> ..................................................
FD980000       --> GTGTAATGACAAATAAGCAAATCCCAGAAACTTAAATTCAGATTTTGCAT
EV549125       --> GTGTAATGACAAATAAGCAAATCCCAGAGACTCAAATTCAGATTTTGCAT
EX773814       --> ..................................................
FD937565       --> GTGTAATGACAAATAAGCAAATCCCAGAAACTCAAATTCAGATTTTGCAT
FD557482       --> GTGTAATGACAAATAAGCAAATCCCAGAAACTCAAATTCAGATTTTGCAT

               1651   -   1701
UN22916        --> TGGAAGGATTCAATTCTTGATGTATCAGTTATTTTTGTTGAATAAAAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533016       <-- TGGAAAGATTC.......................................  Raphanus raphanistrum subsp. maritimus
FD967627       <-- TGGAAGGATTCAATTCTTGATGTATCAGTTATTTTTGTTGAATAAAAGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY926852       <-- TGGAAGGATTCAATTCTTGATGTATCAGTTATTTTTGTTGAATAAAAGGG  Raphanus sativus var. oleiformis
FD553766       <-- TGGAAGGATTCAATTCTTGATGTATCAGTTATTTTTGTTGAATAAAGGAG  Raphanus raphanistrum subsp. landra
EW721453       <-- TGGAAGGATTCAATTCTTGATGTATCCGTTATTTTTGTTGAATAAAAGAG  Raphanus sativus var. oleiformis
EV545595       <-- TGGAAGGATTCAATTCTTGATGTATCAGTTATTTTTGTTGAATAAAAGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777628       <-- TGGAAGGATTCAATTCTTGATGTATCAGTTATTTTTGTTGAATAAAGGAG  Raphanus raphanistrum subsp. landra
FD975961       <-- TGGAAGGATTCAATTCTTGATGTATCAGTTATTTTTGTTGAATAAAAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD577984       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX904227       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD954911       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX765824       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY442085       --> ..................................................  Raphanus sativus cv GSK3-1
FD559255       --> ..................................................  Raphanus raphanistrum subsp. landra
FY447226       --> ..................................................  Raphanus sativus cv GSK3-1
FD557726       --> ..................................................  Raphanus raphanistrum subsp. landra
EV550279       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD971505       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV529214       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD540192       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717471       --> ..................................................  Raphanus sativus var. oleiformis
FD980000       --> TGGAAGGATTCAATTCTTGATGTATCAGTTATTTTTGTTGAATAAAAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV549125       --> TGGAAGGATTCAATTCTTAATGTATCAGTTATTTTTGTTGAATAAAGGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX773814       --> ..................................................  Raphanus raphanistrum subsp. landra
FD937565       --> TGGAAGGATTCAATTCTTGATGTATCAGTTATTTTTGTTGAATAAAAGAG  Raphanus sativus var. oleiformis
FD557482       --> TGGAAGGATTCAATTCTTGAGGTATCAGTTATTTTTGTTGAATAAAGGAG  Raphanus raphanistrum subsp. landra

               1701   -   1751
UN22916        --> TAACTATTCATGTTTAGACCAGAAAGAAAGAGTAACTAGTCATGTCAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533016       <-- ..................................................
FD967627       <-- TAACTA............................................
EY926852       <-- TAACTA............................................
FD553766       <-- TAACTATTC.........................................
EW721453       <-- TAGCTA............................................
EV545595       <-- TAACTA............................................
EX777628       <-- TAACTATTCATGTTTAGACCAGAAAGAAAGAGTAACTAGTCATGTCAGGA
FD975961       <-- TAACTATTCATGTTT...................................
FD577984       --> ..................................................
EX904227       --> ..................................................
FD954911       --> ..................................................
EX765824       --> ..................................................
FY442085       --> ..................................................
FD559255       --> ..................................................
FY447226       --> ..................................................
FD557726       --> ..................................................
EV550279       --> ..................................................
FD971505       --> ..................................................
EV529214       --> ..................................................
FD540192       --> ..................................................
EW717471       --> ..................................................
FD980000       --> TAACTATTCATGT.....................................
EV549125       --> TAACTATTCATGTT....................................
EX773814       --> ..................................................
FD937565       --> TAGCTATTCATGTTTA..................................
FD557482       --> TAACTATTC.........................................

               1751   -   1801
UN22916        --> TGAAGGAAGGAGAGAACTAAACATGTGTAGTGTGTTATGTAATACGGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533016       <-- ..................................................
FD967627       <-- ..................................................
EY926852       <-- ..................................................
FD553766       <-- ..................................................
EW721453       <-- ..................................................
EV545595       <-- ..................................................
EX777628       <-- TGAAGGAAGGAGAGAACTAAACATGTGTAGTGTGTTATGTAATACGGGTG
FD975961       <-- ..................................................
FD577984       --> ..................................................
EX904227       --> ..................................................
FD954911       --> ..................................................
EX765824       --> ..................................................
FY442085       --> ..................................................
FD559255       --> ..................................................
FY447226       --> ..................................................
FD557726       --> ..................................................
EV550279       --> ..................................................
FD971505       --> ..................................................
EV529214       --> ..................................................
FD540192       --> ..................................................
EW717471       --> ..................................................
FD980000       --> ..................................................
EV549125       --> ..................................................
EX773814       --> ..................................................
FD937565       --> ..................................................
FD557482       --> ..................................................

               1801   -   1851
UN22916        --> ATGGCTGCTGTGGTATGGGACTCGACGATGTGGACTTGGCCAATATTGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533016       <-- ..................................................
FD967627       <-- ..................................................
EY926852       <-- ..................................................
FD553766       <-- ..................................................
EW721453       <-- ..................................................
EV545595       <-- ..................................................
EX777628       <-- ATGGCTGCTGTGGTATGGGACTCGACGATGTGGACTTGGCCAATATTGTG
FD975961       <-- ..................................................
FD577984       --> ..................................................
EX904227       --> ..................................................
FD954911       --> ..................................................
EX765824       --> ..................................................
FY442085       --> ..................................................
FD559255       --> ..................................................
FY447226       --> ..................................................
FD557726       --> ..................................................
EV550279       --> ..................................................
FD971505       --> ..................................................
EV529214       --> ..................................................
FD540192       --> ..................................................
EW717471       --> ..................................................
FD980000       --> ..................................................
EV549125       --> ..................................................
EX773814       --> ..................................................
FD937565       --> ..................................................
FD557482       --> ..................................................

               1851   -   1901
UN22916        --> TTGGAAGGCCTTTCGTGGCTTCAGGATTTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533016       <-- ...............................
FD967627       <-- ...............................
EY926852       <-- ...............................
FD553766       <-- ...............................
EW721453       <-- ...............................
EV545595       <-- ...............................
EX777628       <-- TTGGAAGGCCTTTCGTGGCTTCAGGATTTAC
FD975961       <-- ...............................
FD577984       --> ...............................
EX904227       --> ...............................
FD954911       --> ...............................
EX765824       --> ...............................
FY442085       --> ...............................
FD559255       --> ...............................
FY447226       --> ...............................
FD557726       --> ...............................
EV550279       --> ...............................
FD971505       --> ...............................
EV529214       --> ...............................
FD540192       --> ...............................
EW717471       --> ...............................
FD980000       --> ...............................
EV549125       --> ...............................
EX773814       --> ...............................
FD937565       --> ...............................
FD557482       --> ...............................