RadishBase

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Alignment for radish unigene UN22918

               1      -     51
UN22918        --> GGGTGGAGAAGAATAAAAAGAGAGATAGCCAGCGAGTGAAACGAAAGGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531565       <-- ..................................................
EX753647       <-- ..................................................
EY895553       <-- ..................................................
FD945489       <-- ..................................................
EY934519       <-- ..................................................
FD555207       <-- ..................................................
EY899868       --> GGGTGGAGAAGAATAAAAAGAGAGATAGCCAACGAGTGAAACGAAAGGCC
EY939563       --> ......................ggaggGCCAGCGAGTGAAACGAAAGGCC
FY439453       --> .............gatagagagggaggGCCAGCGAGTGAAACGAAAGGCC
FD535335       --> ....................................gGAAACGAAAGGCC
EV527274       --> .........................................gGAAAGGCC
FD949906       --> ..........................................ggAAGGCC
FY438472       --> ..................................................
FY429864       --> ..................................................
EX750097       --> ..................................................
FD559512       --> ..................................................
EY921216       --> ..................................................
EY940934       --> ..................................................
EY938360       --> ..................................................

               51     -    101
UN22918        --> ACCACCGTTCTTCAATCTT--CTTCTCCACAATAATGGCGGCCACAAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531565       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX753647       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY895553       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD945489       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY934519       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD555207       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY899868       --> ACCACCGTTCTTCAATCTT--CTTCTCCACAATAATGGCGGCCACAAGAG  Raphanus raphanistrum subsp. maritimus
EY939563       --> ACCACCATTCTTCAATCTT--CTTCTCCAAAATAATGGCGGCCACAAGAG  Raphanus sativus cv Early Scarlet Globe
FY439453       --> ACCACCATTCTTCAATCTT--CTTCTCCAAAATAATGGCGGCCACAAGAG  Raphanus sativus cv GSK3-1
FD535335       --> ACCACCGTTCTTCAATCTT--CTTCTCCACAATAATGGCGGCCACAAGAG  Raphanus raphanistrum subsp. maritimus
EV527274       --> ACCACCGTTCTTCAATCTT--CTTCTCCACAATAATGGCGGCCACAAGAG  Raphanus raphanistrum subsp. maritimus
FD949906       --> ACCACCATTCTTCAATCTTTTCTTCTCCACAATAATGGCGGCCACAAGAG  Raphanus sativus cv Early Scarlet Globe
FY438472       --> .....caTTCTTCA-TCTT--CTTCTCCA-AATAATGGCGGCCACAAGAG  Raphanus sativus cv GSK3-1
FY429864       --> ..................................................  Raphanus sativus cv GSK3-1
EX750097       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD559512       --> ..................................................  Raphanus raphanistrum subsp. landra
EY921216       --> ..................................................  Raphanus raphanistrum subsp. landra
EY940934       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY938360       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               101    -    151
UN22918        --> TGATTACTGCAGCTTCCGCCACCACCTCGTGTTTCCTCGCCAAACGAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531565       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX753647       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY895553       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD945489       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY934519       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD555207       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY899868       --> TGATTACTACAGCTTCCGCCACCACCTCGTGTTTCCTCGCCAAACGAGCT  Raphanus raphanistrum subsp. maritimus
EY939563       --> TGATTACTGCAGCTTCCGCCACCACCTCGTGTTTCCTCGCCAAACGAGCT  Raphanus sativus cv Early Scarlet Globe
FY439453       --> TGATTACTGCAGCTTCCGCCACCACCTCGTGTTTCCTCGCCAAACGAGCT  Raphanus sativus cv GSK3-1
FD535335       --> TGATTACTACAGCTTCCGCCACCACCTCGTGTTTCCTCGCCAAACGAGCT  Raphanus raphanistrum subsp. maritimus
EV527274       --> TGATTACTACAGCTTCCGCCACCACCTCGTGTTTCCTCGCCAAACGAGCT  Raphanus raphanistrum subsp. maritimus
FD949906       --> TGATTACTGCAGCTTCCGCCACCACCTCGTGTTTCCTCGCCAAACGAGCT  Raphanus sativus cv Early Scarlet Globe
FY438472       --> TGATTACTGCAGCTTCCGCCACCACCTCGTGTTTCCTCGCCAAACGAGCT  Raphanus sativus cv GSK3-1
FY429864       --> ...........................................ACGAGCT  Raphanus sativus cv GSK3-1
EX750097       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD559512       --> ..................................................  Raphanus raphanistrum subsp. landra
EY921216       --> ..................................................  Raphanus raphanistrum subsp. landra
EY940934       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY938360       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               151    -    201
UN22918        --> TTCCTTCTCCCGTCGAAGAGATCATGCGGCGGCGGCGGCGCTCTATGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531565       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX753647       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY895553       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD945489       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY934519       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD555207       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY899868       --> TTCCTTCTCCCGGCAAAGAGATCATGCGGCGGCGGCGGCGCTCTATGCTT  Raphanus raphanistrum subsp. maritimus
EY939563       --> TTCCTTCTCCCGTCGAAGAGATCATGCGGCGGCGGCG---CTCTATGCTT  Raphanus sativus cv Early Scarlet Globe
FY439453       --> TTCCTTCTCCCGTCGAAGAGATCATGCGGCGGCGGCG---CTCTATGCTT  Raphanus sativus cv GSK3-1
FD535335       --> TTCCTTCTCCCGGCAAAGAGATCATGCGGCGGCGGCGGCGCTCTATGCTT  Raphanus raphanistrum subsp. maritimus
EV527274       --> TTCCTTCTCCCGGCAAAGAGATCATGCGGCGGCGGCGGCGCTCTATGCTT  Raphanus raphanistrum subsp. maritimus
FD949906       --> TTCCTTCTCCCGGCGAAGAGATCATGCGGCGGCGGCGGCGCTCTATGCTT  Raphanus sativus cv Early Scarlet Globe
FY438472       --> TTCCTTCTCCCGTCGAAGAGATCATGCGGCGGCGGCG---CTCTATGCTT  Raphanus sativus cv GSK3-1
FY429864       --> TTCCTTCTCCCGTCGAAGAGATCATGCGGCGGCGGCG---CTCTATGCTT  Raphanus sativus cv GSK3-1
EX750097       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD559512       --> ..................................................  Raphanus raphanistrum subsp. landra
EY921216       --> ..................................................  Raphanus raphanistrum subsp. landra
EY940934       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY938360       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               201    -    251
UN22918        --> CAACAACAGAAGAGCTTTGGTGCTGAAATCGAAGCGACCCTTCTCTTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531565       <-- ..................................................
EX753647       <-- ..................................................
EY895553       <-- ..................................................
FD945489       <-- ..................................................
EY934519       <-- ..................................................
FD555207       <-- ..................................................
EY899868       --> CAACAACAGAAGAGCTTTGGTGCTGAAATCGAAGCGACCCTTCTCTTGCA
EY939563       --> CAACAACAGAAGAGCTTTGGTGCTGAAATCGAAGCGACCCTTCTCTTGCA
FY439453       --> CAACAACAGAAGAGCTTTGGTGCTGAAATCGAAGCGACCCTTCTCTTGCA
FD535335       --> CAACAACAGAAGAGCTTTGGTGCTGAAATCGAAGCGACCCTTCTCTTGCA
EV527274       --> CAACAACAGAAGAGCTTTGGTGCTGAAATCGAAGCGACCCTTCTCTTGCA
FD949906       --> CAACAACAGAAGAGCTTTGGTGCTGAAATCGAAGCGACCCTTCTCTTGCA
FY438472       --> CAACAACAGAAGAGCTTTGGTGCTGAAATCGAAGCGACCCTTCTCTTGCA
FY429864       --> CAACAACAGAAGAGCTTTGGTGCTGAAATCGAAGCGACCCTTCTCTTGCA
EX750097       --> ........................GAAATCGAAGCGACCCTTCTCTTGCA
FD559512       --> ..............................GAAGCGACCCTTCTCTTGCA
EY921216       --> ..................................................
EY940934       --> ..................................................
EY938360       --> ..................................................

               251    -    301
UN22918        --> GTGCCATTTACAACCCTCAGGTTAAGGTCAAAGAAGAAGGTCAACCCGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531565       <-- ..................................................
EX753647       <-- ..................................................
EY895553       <-- ..................................................
FD945489       <-- ..................................................
EY934519       <-- ..................................................
FD555207       <-- ..................................................
EY899868       --> GTGCCATTTACAACCCTCAGGTTAAGGTCAAAGAAGAAGGTCAACCCGAA
EY939563       --> GTGCCATTTACAACCCTCAGGTTAAGGTCAAAGAAGAAGGTCAACCCGAA
FY439453       --> GTGCCATTTACAATCCTCAGGTTAAGGTCAAAGAAGAAGGTCAACCCGAA
FD535335       --> GTGCCATTTACAACCCTCAGGTTAAGGTCAAAGAAGAAGGTCAACCCGAA
EV527274       --> GTGCCATTTACAACCCTCAGGTTAAGGTCAAAGAAGAAGGTCAACCCGAA
FD949906       --> GTGCCATTTACAACCCTCAGGTTAAGGTCAAAGAAGAAGGTCAACCCGAA
FY438472       --> GTGCCATTTACAATCCTCAGGTTAAGGTCAAAGAAGAAGGTCAACCCGAA
FY429864       --> GTGCCATTTACAATCCTCAGGTTAAGGTCAAAGAAGAAGGTCAACCCGAA
EX750097       --> GTGCCATTTACAACCCTCAGGTTAAGGTCAAAGAAGAAGGTCAACCCGAA
FD559512       --> GTGCCATTTACAACCCTCAGGTTAAGGTCAAAGAAGAAGGTCAACCCGAA
EY921216       --> ...............................................GAA
EY940934       --> ...............................................GAA
EY938360       --> ..................................................

               301    -    351
UN22918        --> ACCCTAGATTATCGCGTCTTCTTCCTCGATGGCTCCGGAAAGAAGGTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531565       <-- .......ATTATCGCGTCTTCTTCCTCGATGGCTCCGGAAAGAAGGTTTC  Raphanus raphanistrum subsp. maritimus
EX753647       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY895553       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD945489       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY934519       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD555207       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY899868       --> ACCCTTGATTATCGCGTCTTCTTCCTCGATGGCTCCGGAAAGAAGGTTTC  Raphanus raphanistrum subsp. maritimus
EY939563       --> ACCCTAGATTATCGTGTCTTCTTCCTCGATGGCTCCGGAAAGAAGGTTTC  Raphanus sativus cv Early Scarlet Globe
FY439453       --> ACCCTAGATTATCGTGTCTTCTTCCTCGATGGCTCCGGAAAGAAGGTTTC  Raphanus sativus cv GSK3-1
FD535335       --> ACCCTAGATTATCGCGTCTTCTTCCTCGATGGCTCCGGAAAGAAGGTTTC  Raphanus raphanistrum subsp. maritimus
EV527274       --> ACCCTAGATTATCGCGTCTTCTTCCTCGATGGCTCCGGAAAGAAGGTTTC  Raphanus raphanistrum subsp. maritimus
FD949906       --> ACCCTAGATTATCGCGTCTTCTTCCTCGATGGCTCCGGAAAGAAGGTTTC  Raphanus sativus cv Early Scarlet Globe
FY438472       --> ACCCTAGATTATCGTGTCTTCTTCCTCGATGGCTCCGGAAAGAAGGTTTC  Raphanus sativus cv GSK3-1
FY429864       --> ACCCTAGATTATCGTGTCTTCTTCCTCGATGGCTCCGGAAAGAAGGTTTC  Raphanus sativus cv GSK3-1
EX750097       --> ACCCTAGATTATCGCGTCTTCTTCCTCGATGGCTCCGGAAAGAAGGTTTC  Raphanus raphanistrum subsp. maritimus
FD559512       --> ACCCTTGATTATCGCGTCTTCTTCCTCGATGGCTCCGGAAAGAAGGTTTC  Raphanus raphanistrum subsp. landra
EY921216       --> ACCCTTGATTATCGCGTCTTCTTCCTCGATGGCTCCGGAAAGAAGGTTTC  Raphanus raphanistrum subsp. landra
EY940934       --> ACCCTAGATTATCGTGTCTTCTTCCTCGATGGCTCCGGAAAGAAGGTTTC  Raphanus sativus cv Early Scarlet Globe
EY938360       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               351    -    401
UN22918        --> TCCATGGCATGATATACCATTGACCTTGGGAGATGGAGTTTACAATTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531565       <-- TCCATGGCATGATATACCATTGACCTTGGGAGATGGAGTTTACAATTTTA
EX753647       <-- ..............................AGATGGAGTTTACAATTTTA
EY895553       <-- ..................................................
FD945489       <-- ..................................................
EY934519       <-- ..................................................
FD555207       <-- ..................................................
EY899868       --> TCCATGGCATGATATACCATTGACCTTGGGAGATGGAGTTTACAATTTTA
EY939563       --> TCCATGGCATGATATACCATTGACCTTGGGAGATGGAGTTTACAATTTTA
FY439453       --> TCCATGGCATGATATACCATTGACCTTGGGAGATGGAGTTTACAATTTTA
FD535335       --> TCCATGGCATGATATACCATTGACCTTGGGAGATGGAGTTTACAATTTTA
EV527274       --> TCCATGGCATGATATACCATTGACCTTGGGAGATGGAGTTTACAATTTTA
FD949906       --> TCCATGGCATGATATACCATTGACCTTGGGAGATGGAGTTTACAATTTTA
FY438472       --> TCCATGGCATGATATACCATTGACCTTGGGAGATGGAGTTTACAATTTTA
FY429864       --> TCCATGGCATGATATACCATTGACCTTGGGAGATGGAGTTTACAATTTTA
EX750097       --> TCCATGGCATGATATACCATTGACCTTGGGAGATGGAGTTTACAATTTTA
FD559512       --> TCCATGGCATGATATACCATTGACCTTGGGAGATGGAGTTTACAATTTTA
EY921216       --> TCCATGGCATGATATACCATTGACCTTGGGAGATGGAGTTTACAATTTTA
EY940934       --> TCCATGGCATGATATACCATTGACCTTGGGAGATGGAGTTTACAATTTTA
EY938360       --> .....................GACCTTGGGAGATGGAGTTTACAATTTTA

               401    -    451
UN22918        --> TAGTTGAAATCCCTAAAGAGTCAAAAGCCAAAATGGAGGTTGCTACCGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531565       <-- TAGTTGAAATCCCTAAAGAGTCAAAAGCCAAAATGGAGGTTGCTACTGAT  Raphanus raphanistrum subsp. maritimus
EX753647       <-- TAGTTGAAATCCCTAAAGAGTCAAAAGCCAAAATGGAGGTTGCTACTGAT  Raphanus raphanistrum subsp. maritimus
EY895553       <-- .AGTTGAAATCCCTAAAGAGTCAAAAGCCAAAATGGAGGTTGCTACTGAT  Raphanus raphanistrum subsp. maritimus
FD945489       <-- .............TAAAGAGTCAAAAGCCAAAATGGAGGTTGCTACCGAT  Raphanus sativus cv Early Scarlet Globe
EY934519       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD555207       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY899868       --> TAGTTGAAATCCCTAAAGAGTCAAAAGCCAAAATGGAGGTTGCTACTGAT  Raphanus raphanistrum subsp. maritimus
EY939563       --> TAGTTGAAATCCCTAAAGAGTCAAAAGCCAAAATGGAGGTTGCTACCGAT  Raphanus sativus cv Early Scarlet Globe
FY439453       --> TAGTTGAAATCCCTAAAGAGTCAAAAGCCAAAATGGAGGTTGCTACCGAT  Raphanus sativus cv GSK3-1
FD535335       --> TAGTCGAAATCCCTAAAGAGTCAAAAGCCAAAATGGAGGTTGCTACTGAT  Raphanus raphanistrum subsp. maritimus
EV527274       --> TAGTTGAAATCCCTAAAGAGTCAAAAGCCAAAATGGAGGTTGCTACTGAT  Raphanus raphanistrum subsp. maritimus
FD949906       --> TAGTTGAAATCCCTAAAGAGTCAAAAGCCAAAATGGAGGTTGCTACCGAT  Raphanus sativus cv Early Scarlet Globe
FY438472       --> TAGTTGAAATCCCTAAAGAGTCAAAAGCCAAAATGGAGGTTGCTACCGAT  Raphanus sativus cv GSK3-1
FY429864       --> TAGTTGAAATCCCTAAAGAGTCAAAAGCCAAAATGGAGGTTGCTACCGAT  Raphanus sativus cv GSK3-1
EX750097       --> TAGTTGAAATCCCTAAAGAGTCAAAAGCCAAAATGGAGGTTGCTACTGAT  Raphanus raphanistrum subsp. maritimus
FD559512       --> TAGTTGAAATCCCTAAAGAGTCAAAAGCCAAAATGGAGGTTGCTACCGAT  Raphanus raphanistrum subsp. landra
EY921216       --> TAGTTGAAATCCCTAAAGAGTCAAAAGCCAAAATGGAGGTTGCTACTGAT  Raphanus raphanistrum subsp. landra
EY940934       --> TAGTTGAAATCCCTAAAGAGTCAAAAGCCAAAATGGAGGTTGCTACCGAT  Raphanus sativus cv Early Scarlet Globe
EY938360       --> TAGTTGAAATCCCTAAAGAGTCAAAAGCCAAAATGGAGGTTGCTACCGAT  Raphanus sativus cv Early Scarlet Globe

               451    -    501
UN22918        --> GAAGACTTCACTCCTATTAAGCAAGACACTAAGAAGGGAAAGCTCAGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531565       <-- GAAGACTTCACTCCTATTAAGCAAGACACTAAGAAGGGAAAGCTCAGATA
EX753647       <-- GAAGACTTCACTCCTATTAAGCAAGACACTAAGAAGGGAAAGCTCAGATA
EY895553       <-- GAAGACTTCACTCCTATTAAGCAAGACACTAAGAAGGGAAAGCTCAGATA
FD945489       <-- GAAGACTTCACTCCTATTAAGCAAGACACTAAGAAGGGAAAGCTCAGATA
EY934519       <-- ................TTAAGCAAGACACTAAGAAGGGAAAGCTCAGATA
FD555207       <-- ..................................................
EY899868       --> GAAGACTTCACTCCTATTAAGCAAGACACTAAGAAGGGAAAGCTCAGATA
EY939563       --> GAAGACTTCACTCCTATTAAGCAAGACACTAAGAAGGGAAAGCTCAGATA
FY439453       --> GAAGACTTCACTCCTATTAAGCAAGACACTAAGAAGGGAAAGCTCAGATA
FD535335       --> GAAGACTTCACTCCTATTAAGCAAGACACTAAGAAGGGAAAGCTCAGATA
EV527274       --> GAAGACTTCACTCCTATTAAGCAAGACACTAAGAAGGGAAAGCTCAGATA
FD949906       --> GAAGACTTCACTCCTATTAAGCAAGACACTAAGAAGGGAAAGCTCAGATA
FY438472       --> GAAGACTTCACTCCTATTAAGCAAGACACTAAGAAGGGAAAGCTCAGATA
FY429864       --> GAAGACTTCACTCCTATTAAGCAAGACACTAAGAAGGGAAAGCTCAGATA
EX750097       --> GAAGACTTCACTCCTATTAAGCAAGACACTAAGAAGGGAAAGCTCAGATA
FD559512       --> GAAGACTTCACTCCTATTAAGCAAGACACTAAGAAGGGAAAGCTCAGATA
EY921216       --> GAAGACTTCACTCCTATTAAGCAAGACACTAAGAAGGGAAAGCTCAGATA
EY940934       --> GAAGACTTCACTCCTATTAAGCAAGACACTAAGAAGGGAAAGCTCACATA
EY938360       --> GAAGACTTCACTCCTATTAAGCAAGACACTAAGAAGGGAAAGCTCAGATA

               501    -    551
UN22918        --> CTATGCGTACAACATTAACTGGAACTATGGGTTGCTTCCGCAGACATGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531565       <-- CTATGCGTACAACATTAACTGGAACTATGGGTTGCTTCCGCAGACATGGG  Raphanus raphanistrum subsp. maritimus
EX753647       <-- CTATGCGTACAACATTAACTGGAACTATGGGTTGCTTCCGCAGACATGGG  Raphanus raphanistrum subsp. maritimus
EY895553       <-- CTATGCGTACAACATTAACTGGAACTATGGGTTGCTTCCGCAGACATGGG  Raphanus raphanistrum subsp. maritimus
FD945489       <-- CTATCCGTACAACATAAACTGGAACTATGGGTTGCTTCCACAGACATGGG  Raphanus sativus cv Early Scarlet Globe
EY934519       <-- CTATCCGTACAACATAAACTGGAACTATGGGTTGCTTCCACAGACATGGG  Raphanus sativus cv Early Scarlet Globe
FD555207       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY899868       --> CTATGCGTACAACATTAACTGGAACTATGGGTTGCTTCCGCAGACATGGG  Raphanus raphanistrum subsp. maritimus
EY939563       --> CTATCCGTACAACATTAACTGGAACTATGGGTTGCTTCCGCAGACATGGG  Raphanus sativus cv Early Scarlet Globe
FY439453       --> CTATCCGTACAACATTAACTGGAACTATGGGTTGCTTCCGCAGACATGGG  Raphanus sativus cv GSK3-1
FD535335       --> CTATGCGTACAACATTAACTGGAACTATGGGTTGCTTCCGCAGACATGGG  Raphanus raphanistrum subsp. maritimus
EV527274       --> CTATGCGTACAACATTAACTGGAACTATGGGTTGCTTCCGCAGACATGGG  Raphanus raphanistrum subsp. maritimus
FD949906       --> CTATCCGTACAACATAAACTGGAACTATGGGTTGCTTCCACAGACATGGG  Raphanus sativus cv Early Scarlet Globe
FY438472       --> CTATCCGTACAACATTAACTGGAACTATGGGTTGCTTCCGCAGACATGGG  Raphanus sativus cv GSK3-1
FY429864       --> CTATCCGTACAACATTAACTGGAACTATGGGTTGCTTCCGCAGACATGGG  Raphanus sativus cv GSK3-1
EX750097       --> CTATGCGTACAACATTAACTGGAACTATGGGTTGCTTCCGCAGACATGGG  Raphanus raphanistrum subsp. maritimus
FD559512       --> CTATGCGTACAACATTAACTGGAACTATGGGTTGCTTCCGCAGACATGGG  Raphanus raphanistrum subsp. landra
EY921216       --> CTATGCGTACAACATTAACTGGAACTATGGGTTGCTTCCGCAGACATGGG  Raphanus raphanistrum subsp. landra
EY940934       --> CTATCCGTAC........................................  Raphanus sativus cv Early Scarlet Globe
EY938360       --> CTATCCGTACAACATAAACTGGAACTATGGGTTGCTTCCACAGACATGGG  Raphanus sativus cv Early Scarlet Globe

               551    -    601
UN22918        --> AAGATCCATCTCAGGCAAACGCTGAAGTTGAAGGAGCTTTTGGGGATAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531565       <-- AAGATCCATTTCAGGCAAACGCTGAAGTTGAAGGAGCTTTTGGGGACAAT  Raphanus raphanistrum subsp. maritimus
EX753647       <-- AAGATCCATCTCAGGCAAACGCTGAAGTTGAAGGAGCTTTTGGGGATAAT  Raphanus raphanistrum subsp. maritimus
EY895553       <-- AAGATCCATCTCAGGCAAACGCTGAAGTTGAAGGAGCTTTTGGGGATAAT  Raphanus raphanistrum subsp. maritimus
FD945489       <-- AAGATCCATCTCAGGCAAACGCTGAAGTCGAAGGAGCTTTTGGGGATAAT  Raphanus sativus cv Early Scarlet Globe
EY934519       <-- AAGATCCATCTCAGGCAAACGCTGAAGTCGAAGGAGCTTTTGGGGATAAT  Raphanus sativus cv Early Scarlet Globe
FD555207       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY899868       --> AAGATCCATCTCACGCAAACGCTGAAGTTGAAG-AGCTTTTGGGGATAAT  Raphanus raphanistrum subsp. maritimus
EY939563       --> AAGATCCATCTCAGGCAAACGCTGAAGTTGAAGGAGCTTTTGGGGACAAT  Raphanus sativus cv Early Scarlet Globe
FY439453       --> AAGATCCATCTCAGGCAAACGCTGAAGTTGAAGGAGCTTTTGGGGACAAT  Raphanus sativus cv GSK3-1
FD535335       --> AAGATCCATCTCAGGCAAACGCTGAAGTTGAAGGAGCTTTTGGGGATAAT  Raphanus raphanistrum subsp. maritimus
EV527274       --> AAGATCCATCTCAGGCAAACGCTGAAGTTGAAGGAGCTTTTGGGGACAAT  Raphanus raphanistrum subsp. maritimus
FD949906       --> AAGATCCATCTCAGGCAAACGCTGAAGTCGAAGGAGCTTTTGGGGATAAT  Raphanus sativus cv Early Scarlet Globe
FY438472       --> AAGATTCATCTCAGGCAAACGCTGAAGTTGAAGGAGCTTTTGGGGACAAT  Raphanus sativus cv GSK3-1
FY429864       --> AAGATCCATCTCAGGCAAACGCTGAAGTTGAAGGAGCTTTTGGGGACAAT  Raphanus sativus cv GSK3-1
EX750097       --> AAGACCCATCTCAGGCAAACGCTGAAGTTGAAGGAGCTTTTGGGGATAAT  Raphanus raphanistrum subsp. maritimus
FD559512       --> AAGATCCATCTCAGGCAAACGCTGAAGTTGAAGGAGCTTTTGGGGATAAT  Raphanus raphanistrum subsp. landra
EY921216       --> AAGATCCATCTCAGGCAAACGCTGAAGTTGAAGGAGCTTTTGGGGATAAT  Raphanus raphanistrum subsp. landra
EY940934       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY938360       --> AAGATCCATCTCAGGCAAACGCTGAAGTCGAAGGAGCTTTTGGGGATAAT  Raphanus sativus cv Early Scarlet Globe

               601    -    651
UN22918        --> GATCCAGTTGATGTTGTTGAGATTGGTGAAACCCAAAGGAAGATAGGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531565       <-- GATCCAGTTGATGTTGTTGAGATTGGTGAAACCCAAAGGAAGATAGGGGA  Raphanus raphanistrum subsp. maritimus
EX753647       <-- GATCCAGTTGATGTTGTTGAGATTGGTGAAGCCCAAAGGAAGATAGGGGA  Raphanus raphanistrum subsp. maritimus
EY895553       <-- GATCCAGTTGATGTTGTTGAGATTGGTGAAACCCAAAGGAAGATAGGGGA  Raphanus raphanistrum subsp. maritimus
FD945489       <-- GATCCAGTTGATGTTGTTGAGATTGGTGAAACCCAAAGGAAGATAGGGGA  Raphanus sativus cv Early Scarlet Globe
EY934519       <-- GATCCAGTTGACGTTGTTGAGATTGGTGAAACCCAAAGGAAGATAGGGGA  Raphanus sativus cv Early Scarlet Globe
FD555207       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY899868       --> GATCCAGTTGATGTTGTTGAGATTGGTGAAACCC................  Raphanus raphanistrum subsp. maritimus
EY939563       --> GATCCAGTTGATGTTGTTGAGATTGGTGAAACCCAAAGaag.........  Raphanus sativus cv Early Scarlet Globe
FY439453       --> GATCCAGTTGATGTTGTTGAGATTGGTGAAACCCAAAGGAAGATAGGGGA  Raphanus sativus cv GSK3-1
FD535335       --> GATCCAGTTGATGTTGTTGAGATTGGTGAAACCCAAAGGAAGATAGGGGA  Raphanus raphanistrum subsp. maritimus
EV527274       --> GATCCAGTTGATGTTGTTGAGATTGGTGAAACCCAAAGGAAGATAGGGGA  Raphanus raphanistrum subsp. maritimus
FD949906       --> GATCCAGTTGATGTTGTTGAGATTGGTGAAACCCAAAGGAA.........  Raphanus sativus cv Early Scarlet Globe
FY438472       --> GATCCAGTTGATGTTGTTGAGATTGGTGAAACCCAAAGGAAGATAGGGGA  Raphanus sativus cv GSK3-1
FY429864       --> GATCCAGTTGATGTTGTTGAGATTGGTGAAACCCAAAGGAAGATAGGGGA  Raphanus sativus cv GSK3-1
EX750097       --> GATCCAGTTGATGTTGTTGAGATTGGTGAAGCCCAAAGGAAGATAGGGGA  Raphanus raphanistrum subsp. maritimus
FD559512       --> GATTCAGTTGATGTTGTTGAGATTGGTGAAACCCAAAGGAAGATAGGGGA  Raphanus raphanistrum subsp. landra
EY921216       --> GATCCAGTTGATGTTGTTGAGATTGGTGAAACCCAAAGGAAGATAGGGGA  Raphanus raphanistrum subsp. landra
EY940934       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY938360       --> GATCCAGTTGACGTTGTTGAGATTGGTGAAACCCAAAGGAAGATAGGGGA  Raphanus sativus cv Early Scarlet Globe

               651    -    701
UN22918        --> AGTTCTAAAAATCAAGCCTTTAGCTGCTTTAGCTATGATTGATGAAGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531565       <-- AGTTCTAAAAATCACGCCTTTAGCTGCTTTAGCTATGATTGATGAAGGAG  Raphanus raphanistrum subsp. maritimus
EX753647       <-- AGTTCTAAAAATCAAGCCTTTAGCTGCTTTAGCTATGATTGATGAAGGAG  Raphanus raphanistrum subsp. maritimus
EY895553       <-- AGTTCTAAAAATCAAGCCTTTAGCTGCTTTAGCTATGATTGATGAAGGAG  Raphanus raphanistrum subsp. maritimus
FD945489       <-- GGTTCTAAAAATCAAGCCTTTAGCTGCTTTAGCTATGATTGATGAAGGAG  Raphanus sativus cv Early Scarlet Globe
EY934519       <-- GGTTCTAAAAATCAAGCCTTTAGCTGCTTTAGCTATGATTGATGAAGGAG  Raphanus sativus cv Early Scarlet Globe
FD555207       <-- ........AAATCAAGCCTTTAGCTGCTTTAGCTATGATTGATGAAGGAG  Raphanus raphanistrum subsp. landra
EY899868       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY939563       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY439453       --> GGTTCTAAAAATCAAGCCTTTAGCTGCTTTAGCTATGATTGATGAAGGAG  Raphanus sativus cv GSK3-1
FD535335       --> AGTTCTAAAAATCAAGCCTTTAGCTGCTTTAGCTATGATTGATGAAG-AG  Raphanus raphanistrum subsp. maritimus
EV527274       --> AGTTCTAAAAATCACGCCTTTAGCTGCTTTAGCTATGATTGATGAAGGAG  Raphanus raphanistrum subsp. maritimus
FD949906       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY438472       --> GGTTCTAAAAATCAAGCCTTTAGCTGCTTTAGCTATGATTGATGAAGGAG  Raphanus sativus cv GSK3-1
FY429864       --> GGTTCTAAAAATCAAGCCTTTAGCTGCTTTAGCTATGATTGATGAAGGAG  Raphanus sativus cv GSK3-1
EX750097       --> AGTTCTAAAAATCAAGCCTTTAGCTGCTTTAGCTATGATTGATGAAGGAG  Raphanus raphanistrum subsp. maritimus
FD559512       --> AGTTCTAAAAATCAAGCCTTTAGCTGCTTTAGCTATGATTGATGAAGGAG  Raphanus raphanistrum subsp. landra
EY921216       --> AGTTCTAAAAATCAAGCCTTTAGCTGCTTTAGCTATGATTGATGAAGGAG  Raphanus raphanistrum subsp. landra
EY940934       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY938360       --> GGTTCTAAAAATCAAGCCTTTAGCTGCTTTAGCTATGATTGATGAAGGAG  Raphanus sativus cv Early Scarlet Globe

               701    -    751
UN22918        --> AGCTAGACTGGAAGATTGTTGCCATCTCATTGGATGATCCAAAAGCTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531565       <-- AGCTAGACTGGAAGATTGTTGCCATCTCATTGGATGATCCAAAAGCTCAT
EX753647       <-- AGCTAGACTGGAAGATTGTTGCCATCTCATTGGATGATCCAAAAGCTCAT
EY895553       <-- AGCTAGACTGGAAGATTGTTGCCATCTCATTGGATGATCCAAAAGCTCAT
FD945489       <-- AGCTAGACTGGAAGATTGTTGCCATCTCATTGGATGATCCAAAAGCTCAT
EY934519       <-- AGCTAGACTGGAAGATTGTTGCCATCTCATTGGATGATCCAAAAGCTCAT
FD555207       <-- AGCTAGACTGGAAGATTGTTGCCATCTCATTGGATGATCCAAAAGCTCAT
EY899868       --> ..................................................
EY939563       --> ..................................................
FY439453       --> AGCTAGACTGGAAGATCGTTGCTATTTCTTTGGATGACCCAAAAGCTCAT
FD535335       --> AGCTAGACTGGAAGATTGTTGCCATCTCATTGGATGATCCAAA-GCTCAT
EV527274       --> AGCTAGACTGGAAGATTGTTGCCATCTCATTGGATGATCCAAAAGCTCAT
FD949906       --> ..................................................
FY438472       --> AGCTAGACTGGAAGATCGTTGCTATTTCTTTGGATGACCCAAAAGCTCAT
FY429864       --> AGCTAGACTGGAAGATCGTTGCTATTTCTTTGGATGACCCAAAAGCTCAT
EX750097       --> AGCTAGACTGGAAGATTGTTGCCATCTCATTGGATGATCCAAAAGCTCAT
FD559512       --> AGCTAGACTGGAAGATTGTTGCCATCTCATTGGATGATCCAAAAGCTCAT
EY921216       --> AGCTAGACTGGAAGATTGCTGCCATCTCATTGGATGATCCAAAAGCTCAT
EY940934       --> ..................................................
EY938360       --> AGCTAGACTGGAAGATTGTTGCCATCTCATTGGATGATCCAAAAGCTCAT

               751    -    801
UN22918        --> CTTGTGAATGATGTTGATGATGTTGAGAAGCATTTTCCTGGTACATTAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531565       <-- CTTGTGAATGATGTTGATGATGTTGAGAAGCATTTTCCTGGTACATTAAC
EX753647       <-- CTTGTGAATGATGTTGATGATGTTGAGAAGCATTTTCCTGGTACATTAAC
EY895553       <-- CTTGTGAATGATGTTGATGATGTTGAGAAGCATTTTCCTGGTACATTAAC
FD945489       <-- CTTGTGAATGATGTTGATGATGTTGAGAAGCATTTTCCTGGTACATTAAC
EY934519       <-- CTTGTGAATGATGTTGATGATGTTGAGAAGCATTTTCCTGGTACATTAAC
FD555207       <-- CTTGTGAATGATGTTGATGATGTTGAGAAGCATTTTCCTGGTACATTAAC
EY899868       --> ..................................................
EY939563       --> ..................................................
FY439453       --> CTTGTGAATGATGTTGATGATGTTGAGAAGCATTTTCCTGGTACATTAAC
FD535335       --> CTgtga............................................
EV527274       --> CTTGTGAATGATGTTGATGATGTTGAGAAGCATTTTCCTGGTACATTAAC
FD949906       --> ..................................................
FY438472       --> CTTGTGAATGATGTTGATGATGTTGAGAAGCATTTTCCTGGTACATTAAC
FY429864       --> CTTGTGAATGATGTTGATGATGTTGAGAAGCATTTTCCTGGTACATTAAC
EX750097       --> CTTGTGAATGATGTTGATGATGTTGAGAAGCATTTTCCTGGTACATTAAC
FD559512       --> CTTGTGAATGATGTTGATGATGTTGAGAAGCATTTTCCTGGTACATTAAC
EY921216       --> CTTGTGAATGATGTTGATGATGTTGAGAAGCATTTTCCTGGTACATTAAC
EY940934       --> ..................................................
EY938360       --> CTTGTGAATGATGTTGATGATGTTGAGAAGCATTTTCCTGGTACATTAAC

               801    -    851
UN22918        --> AGCTATTAGAGACTGGTTTAGAGACTACAAGATCCCAGATGGAAAGCCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531565       <-- AGCTATTAGAGGCTGGTTTAGAGACTACAAGATCCCAGATGGAAAGCCTG
EX753647       <-- AGCTATTAGAGACTGGTTTAGAGACTACAAGATCCCAGATGGAAAGCCTG
EY895553       <-- AGCTATTAGAGACTGGTTTAGAGACTACAAGATCCCAGATGGAAAGCCTG
FD945489       <-- AGCTATTAGAGACTGGTTTAGAGACTACAAGATCCCAGGTGGAAAGCCTG
EY934519       <-- AGCTATTAGAGACTGGTTTAGAGACTACAAGATCCCAGATGGAAAGCCTG
FD555207       <-- AGGTATTAGAGACTGGTTTAGAGACTACAAGATCCCAGATGGAAAGCCTG
EY899868       --> ..................................................
EY939563       --> ..................................................
FY439453       --> AGCTATTAGAGACTGGTTTAGAGACTACAAGATCCCAGATGGGAAGCCTG
FD535335       --> ..................................................
EV527274       --> AGCTATTAGAGGCTGGTTTAGAGACTACAAGATCCCAGATGGAAAGCCTG
FD949906       --> ..................................................
FY438472       --> AGCTATTAGAGACTGGTTTAGAGACTACAAGATCCCAGATGGAAAGCCTG
FY429864       --> AGCTATTAGAGACTGGTTTAGAGACTACAAGATCCCAGATGGAAAGCCTG
EX750097       --> AGCTATTAGAGACTGGTTTAGAGACTACAAGATCCCAGATGGAAAGCCTG
FD559512       --> AGCTATTAGAGACTGGTTTAGAGACTACAAGATCCCAGATGGAAAGCCTG
EY921216       --> AGCTATTAGAGACTGGTTTAGAGACTACAAGATCCCAGATGGAAAGCCTG
EY940934       --> ..................................................
EY938360       --> AGCTATTAGAGACTGGTTTAGAGACTACAAGATCCCAGATGGAAAGCCTG

               851    -    901
UN22918        --> CTAACAGGTTCGGTCTTGGAGACAAACCAGCAAACAAAGACTATGCATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531565       <-- CTAACAGGTTCGGTCTTGGAGACAAACCAGCAAACAAAGACTATGCATTG
EX753647       <-- CTAACAGGTTCGGTCTTGGAGACAAACCAGCAAACAAAGACTATGCATTG
EY895553       <-- CTAACAGGTTCGGTCTTGGAGACAAACCAGCAAACAAAGACTATGCATTG
FD945489       <-- CTAACAGGTTCGGTCTCGGAGACAAACCAGCAAACAAAGACTATGCATTG
EY934519       <-- CTAACAGGTTCGGTCTTGGAGACAAACCAGCAAACAAAGGCTATGCATTG
FD555207       <-- CTAACAGGTTTGGTTTTGGAGACAAACCAGCAAACAAAGACTATGCATTG
EY899868       --> ..................................................
EY939563       --> ..................................................
FY439453       --> CTAACAGGTTCGGTCTTGGAGACAA-CCAGCAAA................
FD535335       --> ..................................................
EV527274       --> CTAAC.............................................
FD949906       --> ..................................................
FY438472       --> CTAACAGGTTCGGTCTTGGAGACAAACCAGCAAACAAAGACTATGCATTG
FY429864       --> CTAACAGGTTCGGTCTTGGAGACAAACCAGCAAACAAAGACTATGCATTG
EX750097       --> CTAACAGGTTCGGTCTTGGAGACAAACCAGCAAACAAAGACTATGCATTG
FD559512       --> CTAACAGGTTCGGTCTTGGAGACAAACCAGCAAACAAAGACTATGCATTG
EY921216       --> CTAACAGGTTCGGTCTTGGAGACAAACCAGCAAACAAAGACTATGCATTG
EY940934       --> ..................................................
EY938360       --> CTAACAGGTTCGGTCTTGGAGACAAACCAGCAAACAAAGGCTATGCATTG

               901    -    951
UN22918        --> AAGATCATTCATGAAACAAATGAGTCGTGGGCTAAACTTGTTAAGAGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531565       <-- AAGATCATTCATGAAACAAATGAGTCGTGGGCTAAACTTGTTAAGAGATC
EX753647       <-- AAGATCATTCATGAAACAAATGAGTCGTGGGCTAAACTTGTTAAGAGATC
EY895553       <-- AAGATCATTCATGAAACAAATGAGTCGTGGGCTAAACTTGTTAAGAGATC
FD945489       <-- AAGATCATTCATGAAACAAATGAGTCGTGGGCTAAACTTGTTAAGAGATC
EY934519       <-- AAGATCATTCATGAAACAAATGAGTCGTGGGCTAAACTTGTTAAGAGATC
FD555207       <-- AAGATCATTCATGAAACAAATGAGTTGTGGGGTAAACTTGTTAAGAGATC
EY899868       --> ..................................................
EY939563       --> ..................................................
FY439453       --> ..................................................
FD535335       --> ..................................................
EV527274       --> ..................................................
FD949906       --> ..................................................
FY438472       --> AAGATCATT.........................................
FY429864       --> AAGATCATTCATGAAACAAATAAGTCGTGGGCTAAACTTGTTAAGAGATC
EX750097       --> AAGATCATTCATGAAACAAATGAGT.........................
FD559512       --> AAGATCATTCATGAAACAAATGAGTCGTGGGCTAA-CTTGTTAAGAGATC
EY921216       --> AAGATCATTCATGAAACAAATGAGTCGTGGGCTAAACTTGTTAAGAGATC
EY940934       --> ..................................................
EY938360       --> AAGATCATTCATGAAACAAATGAGTCGTGGGCTAAACTTGTTAAGAGATC

               951    -   1001
UN22918        --> AGTTGATGCTGGAGACCTTTCACTTTTCTGAAGATTTA-TTGCAGTGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531565       <-- AGTTGATGCTGGAGACCTTTCACTTTTTTGAAGATTTA-TTGCAGTGTTG  Raphanus raphanistrum subsp. maritimus
EX753647       <-- AGTTGATGCTGGAGACCTTTCACTTTTTTGAAGATTTA-TTGCAGTGTTG  Raphanus raphanistrum subsp. maritimus
EY895553       <-- AGTTGATGCTGGAGACCTTTCACTTTTCTGAAGAGTTA-TTGCAGTGTTG  Raphanus raphanistrum subsp. maritimus
FD945489       <-- AGTTGATGCTGGAGACCTTTCACTTTTCTGAAGAGTTAATTGCAGTGTTG  Raphanus sativus cv Early Scarlet Globe
EY934519       <-- AGTTGATGCTGGAGACCTTTCACTTTTTTGAAGAGTTAATTGCAGTGTTG  Raphanus sativus cv Early Scarlet Globe
FD555207       <-- AGTTGATGCTGGAGACCTTTCACTTTTTTGAAGATTTA-TTGCAGTGTTG  Raphanus raphanistrum subsp. landra
EY899868       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY939563       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY439453       --> ..................................................  Raphanus sativus cv GSK3-1
FD535335       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV527274       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD949906       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY438472       --> ..................................................  Raphanus sativus cv GSK3-1
FY429864       --> AGTTGATGCTGGAGACCTTTCACTTTTCTGAAGAGTTAATTGCAGTGTTG  Raphanus sativus cv GSK3-1
EX750097       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD559512       --> AGTTGATGCTGGAGAC-TTTCACTTTTCTGA-GATTTA-TTGCAGTGT-G  Raphanus raphanistrum subsp. landra
EY921216       --> AGTTGATGCTGGAGACCTTTCACTTTTCTGA-GATTTA-TTGCAGTGT-G  Raphanus raphanistrum subsp. landra
EY940934       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY938360       --> AGTTGATGCTGGAGACCTTTCACT..........................  Raphanus sativus cv Early Scarlet Globe

               1001   -   1051
UN22918        --> TCCAATTCATTCTTGTTTCTTTTTCTTTCAAAAGGGATCTAAACATTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531565       <-- TCCAATTCATTCTTGTTTCTTTTTCTTTCAAAAGGGATCTAAACATTGAG
EX753647       <-- TCCAATTCATTCTTGTTTCTTCTTCTTTCAAAAGGGATCTAAACATTGAG
EY895553       <-- TCCAATTCATTCTTGTTTCTTTTTCTTTCAAAAGGGATCTAAACATTGAG
FD945489       <-- TCCAATTCATTCTTGTTTCTCTTTCTTTCAAAAGGGATCTAAACATTGAG
EY934519       <-- TCCAATTCATTCTTGTTTCTCTTTCTTTCAAAAGGGATCTAAACATTGAG
FD555207       <-- TCCAATTCATTTTTGTTTTTTTTTTTTTCAAAAGGGATTTAAACATTGAG
EY899868       --> ..................................................
EY939563       --> ..................................................
FY439453       --> ..................................................
FD535335       --> ..................................................
EV527274       --> ..................................................
FD949906       --> ..................................................
FY438472       --> ..................................................
FY429864       --> TCCAATTCATTCTTG...................................
EX750097       --> ..................................................
FD559512       --> TC-AATTCATTCT-GTT-CTTTT-CTT-CAAA--GGATCTAA-CATTGAG
EY921216       --> TCCAATTCATTCTTGTTTCTTTT-CTTTCAAAAGG...............
EY940934       --> ..................................................
EY938360       --> ..................................................

               1051   -   1101
UN22918        --> CTTTTGTTTTTCACACCATTGATGACTGAGAAATAATAAAAGATACATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531565       <-- CTTTTGTTTTTCACACCATTGATGACTGAGAAATAATAAAAGATACATTA
EX753647       <-- CTTTTGTTTTTCACACCATTGATGACTGAGAAATAATAAAAGATACATTA
EY895553       <-- CTTTTGTTTTTCACACCATTGATGACTGAGAAATAATAAAAGATACATTA
FD945489       <-- CTTTTGTTTTTCACACCATTGATGACTGAGAAATAATAAAAGATACATTA
EY934519       <-- CTTTTGTTTTTCACACCATTGATGACTGAGAAATAATAAAAGATACATTA
FD555207       <-- CTTTTGTTTTTCACACCATTGA............................
EY899868       --> ..................................................
EY939563       --> ..................................................
FY439453       --> ..................................................
FD535335       --> ..................................................
EV527274       --> ..................................................
FD949906       --> ..................................................
FY438472       --> ..................................................
FY429864       --> ..................................................
EX750097       --> ..................................................
FD559512       --> CTTTgtt...........................................
EY921216       --> ..................................................
EY940934       --> ..................................................
EY938360       --> ..................................................

               1101   -   1151
UN22918        --> TTGTAAAATTTATATTTTGGAAATCATAAAATGAAGGAACCTTATCTAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531565       <-- TTGT..............................................
EX753647       <-- TTGTAAAATTTATATTTTGGAAATCATAAAATGAAGGAACCTTATCTAG.
EY895553       <-- TTGT..............................................
FD945489       <-- TTGTAAAATTTATATTTTGGAAATCATAAAATGAAGGAACCTTATCTAGA
EY934519       <-- TTat..............................................
FD555207       <-- ..................................................
EY899868       --> ..................................................
EY939563       --> ..................................................
FY439453       --> ..................................................
FD535335       --> ..................................................
EV527274       --> ..................................................
FD949906       --> ..................................................
FY438472       --> ..................................................
FY429864       --> ..................................................
EX750097       --> ..................................................
FD559512       --> ..................................................
EY921216       --> ..................................................
EY940934       --> ..................................................
EY938360       --> ..................................................

               1151   -   1201
UN22918        --> AAACGT
                   ~~~~~~
EV531565       <-- ......
EX753647       <-- ......
EY895553       <-- ......
FD945489       <-- AAACGT
EY934519       <-- ......
FD555207       <-- ......
EY899868       --> ......
EY939563       --> ......
FY439453       --> ......
FD535335       --> ......
EV527274       --> ......
FD949906       --> ......
FY438472       --> ......
FY429864       --> ......
EX750097       --> ......
FD559512       --> ......
EY921216       --> ......
EY940934       --> ......
EY938360       --> ......