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Alignment for radish unigene UN22942

               1      -     51
UN22942        --> ATTTAATTATGTCAAAATCAATGTTACGTACCTAATTTATCTTTTAAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940554       <-- ATTTAATTATGTCAAAATCAATGTTACGTACCTAATTTATCTTTTAAATA
FD578161       <-- ..................................................
EX887023       <-- ..................................................
FD533630       <-- ..................................................
FD559454       <-- ..................................................
FD540083       <-- ..................................................
FD576366       <-- ..................................................
EY899574       <-- ..................................................
EY939763       <-- ..................................................
EV527676       <-- ..................................................
EY907177       <-- ..................................................
EX754709       <-- ..................................................
EX756719       <-- ..................................................
EY949222       <-- ..................................................
FY429104       <-- ..................................................
EY898653       <-- ..................................................
FD582350       --> ..................................................
EY935637       --> ..................................................
EY944772       --> ..................................................
EV531862       --> ..................................................
EX758981       --> ..................................................
EX760470       --> ..................................................
EY895313       --> ..................................................
FD942497       --> ..................................................

               51     -    101
UN22942        --> TGGCTATTACACAAATAACTCCTATAAAAATCTAGTGTATATATTTTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940554       <-- TGGCTATTACACAAATAACTCCTATAAAAATCTAGTGTATATATTTTTTA
FD578161       <-- ............................................TTTTTA
EX887023       <-- ..................................................
FD533630       <-- ..................................................
FD559454       <-- ..................................................
FD540083       <-- ..................................................
FD576366       <-- ..................................................
EY899574       <-- ..................................................
EY939763       <-- ..................................................
EV527676       <-- ..................................................
EY907177       <-- ..................................................
EX754709       <-- ..................................................
EX756719       <-- ..................................................
EY949222       <-- ..................................................
FY429104       <-- ..................................................
EY898653       <-- ..................................................
FD582350       --> .......................ATAAAAATCTAGTGTATATATTTTTTA
EY935637       --> ..................................................
EY944772       --> ..................................................
EV531862       --> ..................................................
EX758981       --> ..................................................
EX760470       --> ..................................................
EY895313       --> ..................................................
FD942497       --> ..................................................

               101    -    151
UN22942        --> TATAATCTAGTGTAAATCTTAGATAAACATGACTGGCTCGCTGAGGAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940554       <-- TATAATCTAGTGTAAATCTTAGGTAAAAATGACTGGCTCGCTTAGGAAAT
FD578161       <-- TATAATCTAGTGTAAATCTTAGATAAACATGACTGGACCGCTGAGGAAAT
EX887023       <-- ..................................GGCTCGCTTAGGAAAT
FD533630       <-- ..................................GGCTCGCTGAGGAAAT
FD559454       <-- ..................................................
FD540083       <-- ..................................................
FD576366       <-- ..................................................
EY899574       <-- ..................................................
EY939763       <-- ..................................................
EV527676       <-- ..................................................
EY907177       <-- ..................................................
EX754709       <-- ..................................................
EX756719       <-- ..................................................
EY949222       <-- ..................................................
FY429104       <-- ..................................................
EY898653       <-- ..................................................
FD582350       --> TATAATCTAGTGTAAATCTTAAATAAACATGACTGGACCGCTGAGGAAAT
EY935637       --> ..................................................
EY944772       --> ..................................................
EV531862       --> ..................................................
EX758981       --> ..................................................
EX760470       --> ..................................................
EY895313       --> ..................................................
FD942497       --> ..................................................

               151    -    201
UN22942        --> CGTTTGATAAAAAA-CAAAAGGCTTACATGACTATCTCAATTCTCAAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940554       <-- CGTTTGATAAAAAAACAAAAGGCTTACATGACTATCTCAATTCTCAAATG
FD578161       <-- CGTTTGATAAAAAA-CAAAAGGCTTACATGACTATCTCAATTCTCAAATG
EX887023       <-- CGTTTGATAAAAAA-CAAAAGGCTTACATGACTATCTCAATTCTCAAATG
FD533630       <-- CGTTTGATAAAAAA-CAAAAGGCTTACATGACTATCTCAATTCTCAAATG
FD559454       <-- .................................ATCTAAATTCTCAAATG
FD540083       <-- ..........................................CTCAAATG
FD576366       <-- ..................................................
EY899574       <-- ..................................................
EY939763       <-- ..................................................
EV527676       <-- ..................................................
EY907177       <-- ..................................................
EX754709       <-- ..................................................
EX756719       <-- ..................................................
EY949222       <-- ..................................................
FY429104       <-- ..................................................
EY898653       <-- ..................................................
FD582350       --> CGTTTGATAAAAAA-CAAAAGGCTTACATGACTATCTCAATTCTCAAATG
EY935637       --> ..................................................
EY944772       --> ..................................................
EV531862       --> ..................................................
EX758981       --> ..................................................
EX760470       --> ..................................................
EY895313       --> ..................................................
FD942497       --> ..................................................

               201    -    251
UN22942        --> GTGTTTGGATTATTAGTCGCAGAAACCGCTCATGCCTACATTATTAATAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940554       <-- GTGTTTGGATTATTAGTCGCAGAAACCGCTCATGCCTACATTATTAATAC
FD578161       <-- GTGTTTGGATTATTAGTCGCAGAAACCGCTCATGCCTACATTATTAATAC
EX887023       <-- GTGTTTGGATTATTAGTCGCAGAAACCGCTCATGCCTACATTATTAATAC
FD533630       <-- GTGTTTGGATTATTAGTCGCAGAAACCGCTCATGCCTACATTATTAATAC
FD559454       <-- -TGTTTGGATTATTAGTCGCAGAAACCGCTCATGCCTACATTATTAATAC
FD540083       <-- TTGTTTGGATTATTAGTCGCAGAAACCGCTCATGCCTACATTATTAATAC
FD576366       <-- .....................................ACATTATTAATAC
EY899574       <-- ..................................................
EY939763       <-- ..................................................
EV527676       <-- ..................................................
EY907177       <-- ..................................................
EX754709       <-- ..................................................
EX756719       <-- ..................................................
EY949222       <-- ..................................................
FY429104       <-- ..................................................
EY898653       <-- ..................................................
FD582350       --> GTGTTTGGATTATTAGTCGCAAAAACCGCTCATGCCTACATTATTAATAC
EY935637       --> .................CGCAAAAACCGCTCATGCCTACATTATTAATAC
EY944772       --> ..................................................
EV531862       --> ..................................................
EX758981       --> ..................................................
EX760470       --> ..................................................
EY895313       --> ..................................................
FD942497       --> ..................................................

               251    -    301
UN22942        --> GTTGCAAAAGTTGTCCTTTTGGTTAGATTAATAATGTAATAAAGACAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940554       <-- GTTGCAAAAGTTGTCCTTTTGGTGAGATTAATAATGTAATAAAGACAGTT  Raphanus sativus var. oleiformis
FD578161       <-- GTTGCAAAAGTTGTCCTTTTGGTTAGATTAATAATGTAATAAAGACAGTT  Raphanus sativus cv Rat-Tail Radish #3870
EX887023       <-- GTTGCAAAAGTTGTCCTTTTGGTGAGATTAATAATGTAATAAAGACAGTT  Raphanus sativus var. oleiformis
FD533630       <-- GTTGCAAAAGTTGTCCTTTTGGTTAGATTAATAATGTAATAAAGACAGTT  Raphanus raphanistrum subsp. maritimus
FD559454       <-- GTTGCAAAAGTTGTACTTTTGGTGAGATTAATAATGTAATAAAGACAGTT  Raphanus raphanistrum subsp. landra
FD540083       <-- GTTGCAAAAGTTGTCCTTTTGGTGAGATTAATAATGTAATAATGACAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD576366       <-- GTTGCAAAAGTTGTCCTTTTGGTTAGATTAATAATGTAATAAAGACAGTT  Raphanus sativus cv Rat-Tail Radish #3870
EY899574       <-- ...................................GTAATAAAGACAGTT  Raphanus raphanistrum subsp. maritimus
EY939763       <-- ....................................TAATAAAGACAGTT  Raphanus sativus cv Early Scarlet Globe
EV527676       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY907177       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754709       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX756719       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949222       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY429104       <-- ..................................................  Raphanus sativus cv GSK3-1
EY898653       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD582350       --> GTTGCAAAAGTTGTCCTTTTGGTTAGATTAATAATGTAATAAAGACAGTT  Raphanus sativus cv Rat-Tail Radish #3870
EY935637       --> TTTGCAAAAGTTGTCCTTTTGGTGAGATTAATAATGTAATAAAGACAGTT  Raphanus sativus cv Early Scarlet Globe
EY944772       --> .....AAAAGTTGTCCTTTTGGTTAGATTAATAATGTAATAAAGACAGTT  Raphanus sativus cv Rat-Tail Radish #3870
EV531862       --> ...............CTTTTGGTTAGATTAATAATGTAATAAAGACAGTT  Raphanus raphanistrum subsp. maritimus
EX758981       --> ...................................GTAATAATGACAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760470       --> ...................................GTAATAATGACAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895313       --> ...................................GTAATAAAGACAGTT  Raphanus raphanistrum subsp. maritimus
FD942497       --> ......................................gTAAAGACAGTT  Raphanus sativus cv Early Scarlet Globe

               301    -    351
UN22942        --> ATTAATCAGATATAACGGAGGTATTTTTT-AACAAGTTTTTTGTTTAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940554       <-- ATTAATCAGATATAACGGAGGTATTTTTTTAACAAGTTTTTTGTTTAATG
FD578161       <-- ATTAATCAGATATAACGGAGGTATTTTTT-AACAAGTTTTTTGTTTAATG
EX887023       <-- ATTAATCAGATATAACGGAGGTATTTTTT-AACAAGTTTTTTGTTTAATG
FD533630       <-- ATTAATCAGATATAACGGAGGTATTTTTT-AACAAGTTTTTTGTTTAATG
FD559454       <-- ATTAATCAGATATAACGGAGGTATTTTTT-AACAAGTTTTTTGTTTAATG
FD540083       <-- ATTAATCAGATATAACGGAGGTATTTTTT-AACAAGTTTTTTGTTTAATG
FD576366       <-- ATTAATCAGATATAACGGAGGTATTTTTT-AACAAGTTTTTTGTTTAATG
EY899574       <-- ATTAATCAGATATAACGGAGGTATTTTTT-AACAAGTTTTTTGTTTAATG
EY939763       <-- ATTAATCAGATATAACGGAGGTATTTTT--AACAAGTTTTTTGTTTAATG
EV527676       <-- ..................................................
EY907177       <-- ..................................................
EX754709       <-- ..................................................
EX756719       <-- ..................................................
EY949222       <-- ..................................................
FY429104       <-- ..................................................
EY898653       <-- ..................................................
FD582350       --> ATTAATCAAATATAACGGAGGTATTTTTT-AACAAGTTTTTTGTTTAATG
EY935637       --> ATTAATCAGATATAACGGAGGTATTTTTT-AACAAGTTTTTTGTTTAATG
EY944772       --> ATTAATCAGATATAACGGAGGTATTTTTT-AACAAGTTTTTTGTTTAATG
EV531862       --> ATTAATCAGATATAACGGAGGTATTTTTT-AACAAGTTTTTTGTTTAATG
EX758981       --> ATTAATCAGATATAACGGAGGTATTTTTT-AACAAGTTTTTTGTTTAATG
EX760470       --> ATTAATCAGATATAACGGAGGTATTTTTT-AACAAGTTTTTTGTTTAATG
EY895313       --> ATTAATCAGATATAACGGAGGTATTTTTT-AACAAGTTTTTTGTTTAATG
FD942497       --> ATTAATCAGATATAACGGAGGTATTTTTT-AACAAGTTTTTTGTTTAATG

               351    -    401
UN22942        --> TTTCATAAGCTCTCTCAGTAGGGTGGGCACCATCCCAAAACAAATAAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940554       <-- TTTCATAAGCTCTCTCAGTAGGGTGGGCACCATCCCAAAACAAATAAGAC
FD578161       <-- TTTCATAAGCTCTCTCAGTAGGGTGGGCACCATCCCAAAACAAATAAGAC
EX887023       <-- TTTCATAAGCTCTCTCAGTAGGGTGGGCACCATCCCAAAACAAATAAGAC
FD533630       <-- TTTCATAAGCTCTCTCAGTAGGGTGGGCACCATCCCAAAACAAATAAGAC
FD559454       <-- TTTCATAAGCTCTCTCAGTAGGGTGGGCACCATCCCAAAACAAATAAGAC
FD540083       <-- TTTCATAAGCTCTCTCAGTAGGGTGGGCACCATCCCAAAACAAATAAGAC
FD576366       <-- TTTCATAAGCTCTCTCAGTAGGGTGGGCACCATCCCAAAACAAATAAGAC
EY899574       <-- TTTCATAAGCTCTCTCAGTAGGGTGGGCACCATCCCAAAACAAATAAGAC
EY939763       <-- TTTCATAAGCTCTCTCAGTAGGGTGGGCACCATCCCAAAACAAGTAAGAC
EV527676       <-- ..................................................
EY907177       <-- ..................................................
EX754709       <-- ..................................................
EX756719       <-- ..................................................
EY949222       <-- ..................................................
FY429104       <-- ..................................................
EY898653       <-- ..................................................
FD582350       --> TTTCATAAGCTCTCTCAGTAGGGTGGGCACCATCCCAAAACAAATAAAAC
EY935637       --> TTTCATAAGCTCTCTCAGTAGGGGGGGCACCATCCCAAAACAAGTAAAAC
EY944772       --> TTTCATAAGCTCTCTCAGTAGGGTGGGCACCATCCCAAAACAAATAAGAC
EV531862       --> TTTCATAAGCTCTCTCAGTAGGGGGGGCACCATCCCAAAACAAATAAGAC
EX758981       --> TTTCATAAGCTCTCTCAGTAGGGTGGGCACCATCCCAAAACAAATAAGAC
EX760470       --> TTTCATAAGCTCTCTCAGTAGGGTGGGCACCATCCCAAAACAAATAAGAC
EY895313       --> TTTCATAAGCTCTCTCAGTAGGGTGGGCACCATCCCAAAACAAATAAGAC
FD942497       --> TTTCATAAGCTCTCTCAGTAGGGTGGGCACCATCCCAAAACAAATAAGAC

               401    -    451
UN22942        --> GATGTATTGGGACATATTTTTGATGTCTTCTTTTTGCAGAATACACCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940554       <-- GATGTATTGGGACATATTTTTGATGTCTTCTTTTTGCAGAATACACCTCC
FD578161       <-- GATGTATTGGGACATATTTTTGATGTCTTCTTTTTGCAGAATACACCTCC
EX887023       <-- GATGTATTGGGACATATTTTTGATGTCTTCTTTTTGCAGAATACACCTCC
FD533630       <-- GATGTATTGGGACATATTTTTGATGTCTTCTTTTTGCAGAATACACCTCC
FD559454       <-- GATGTATTGGGACATATTTTTGATGTCTTCTTTTTGCAGAATACACCTCC
FD540083       <-- GATGTATTGGGACATATTTTTGATGTCTTCTTTTTGCAGAATACACCTCC
FD576366       <-- GATGTATTGGGACATATTTTTGATGTCTTCTTTTTGCAGAATACACCTCC
EY899574       <-- GATGTATTGGGACATATTTTTGATGTCTTCTTTTTGCAGAATACACCTCC
EY939763       <-- GATGTATTGGGACATATTTTTGATGTCTTCTTTTTGCAGAATACACCTCC
EV527676       <-- .....................GATGTCT-CTTTT-GCAGAATACAC-TCC
EY907177       <-- ..............................cTTTTGCAGAATACACCTCC
EX754709       <-- .................................TTGCAGAATACACCCCC
EX756719       <-- ..................................................
EY949222       <-- ..................................................
FY429104       <-- ..................................................
EY898653       <-- ..................................................
FD582350       --> GATGTATTGGGACATATTTTTGATGTCTTCTTTTTGCAAAATACACCTCC
EY935637       --> GATGTATTGGGACATATTTTTGATGTCTTCTTTTTGCAAAATACACCTCC
EY944772       --> GATGTATTGGGACATATTTTTGATGTCTTCTTTTTGCAGAATACGCCTCC
EV531862       --> GATGTATTGGGACATATTTTTGATGTCTTCTTTTTGCAGAATACACCTCC
EX758981       --> GATGTATTGGGACATATTTTTGATGTCTTCTTTTTGCAGAATACACCTCC
EX760470       --> GATGTATTGGGACATATTTTTGATGTCTTCTTTTTGCAGAATACACCTCC
EY895313       --> GATGTATTGGGACATATTTTTGATGTCTTCTTTTTGCAGAATACACCTCC
FD942497       --> GATGTATTGGGACATATTTTTGATGTCTTCTTTTTGCAGAATACACCTCC

               451    -    501
UN22942        --> TCCCGTTAATCCGATTTTGCAGCACGGTTTCTTTACCTCCTCAAATCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940554       <-- TCCCGTTAATCCGATTTTGCAGCACGGTTTCTTTACCTCCTCAAATCCAT
FD578161       <-- TCCCGTTAATCCGATTTTGCAGCACGGTTTCTTTACCTCCTCAAATCCAT
EX887023       <-- TCCCGTTAATCCGATTTTGCAGCACGGTTTCTTTACCTCCTCAAATCCAT
FD533630       <-- TCCCGTTAATCCGATTTTGCAGCACGGTTTCTTTACCTCCTCAAATCCAT
FD559454       <-- TCCCGTTAATCCGATTTTGCAGCACGGTTCCTTTACCTCCTCAAATCCAT
FD540083       <-- TCCCGTTATTCCGATTTTGCAGCACGGTTTCTTTACCTCCTCAAGTCCAT
FD576366       <-- TCCCGTTAATCCGATTTTGCAGCACGGTTTCTTTACCTCCTCAAATCCAT
EY899574       <-- TCCCGTTAATCCGATTTTGCAGCACGGTTTCTTTACCTCCTCAAATCCAT
EY939763       <-- TCCCGTTAATCCGATTTTGCAGCACGATTTCTTTACCTCCTCAAATCCAT
EV527676       <-- TCCCGT-AATCCGATTT-GCAGCACGGTTTCTTTAC-T-CTCAAATCCAT
EY907177       <-- TCCCGTTATTCCGATTTTGCAGCACGGTTTCTTTACCTCCTCAAATCCAT
EX754709       <-- TCCCGTTA-TCCGATTT-GCAGCACGGTTTCTTTAC-TCCTCAAATCCAT
EX756719       <-- ......tatTCCGATTTTGCAGCACGGTTTCTTTACCTCCTCAAATCCAT
EY949222       <-- ..................................................
FY429104       <-- ..................................................
EY898653       <-- ..................................................
FD582350       --> TCCCGTTAATCCGATTTTGCAGCACGGTTTCTTTACCTCCTCAAATCCAT
EY935637       --> TCCCGTTAATCCGATTTTGCAGCACGATTTCTTTACCTCCTCAAATCC..
EY944772       --> TCCCGTTAATCCGATTTTGCAGCACGGTTTCTTTACCTCCTCAAATCCAT
EV531862       --> TCCCGTTAATCCGATTTTGCAGCACGGTTTCTTTACCTCCTCAAATCCAT
EX758981       --> TCCCGTTATTCCGATTTTGCAGCACGGTTTCTTTACCTCCTCAAATCCAT
EX760470       --> TCCCGTTATTCCGATTTTGCAGCACGGTTTCTTTACCTCCTCAAATCCAT
EY895313       --> TCCCGTTAATCCGATTTTGCAGCACGGTTTCTTTACCTCCTCAAATCCAT
FD942497       --> TCCCGTTAATCCGATTTTGCAGCACGATTTCTTTACCTCCTCAAATCCAT

               501    -    551
UN22942        --> AGTGCGCAGGGCTTTCTAGTATTTTACTGAAGATAGAGTAGATGTCCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940554       <-- AGTGCGCAGGGCTTTCTAGc..............................
FD578161       <-- AGTGCGCAGGGCTTTCTAGTATTTTACTGAAGATAGAGTAGATGTCCATG
EX887023       <-- AGTGCGCAGGGCTTTCTAGTATTTTACTGAAGATAGAGTAGATGTCCATG
FD533630       <-- AGTGCGCAGGGCTTTCTAGTATTTTACTGAAGATAGAGTAGATGTCCATG
FD559454       <-- AGTGCGCAGGGCTTTCTAGTATTTTACTGAAGATAGAGTAGATGTCCATG
FD540083       <-- AGTGCGCAGGGCTTTCTAGTATTTTACTGAAGATAGAGTAGATGTCCATG
FD576366       <-- AGTGCGCAGGGCTTTCTAGTATTTTACTGAAGATAGAGTAGATGTCCATG
EY899574       <-- AGTGCGCAGGGCTTTCTAGTATTTTACTGAAGATAGAGTAGATGTCCATG
EY939763       <-- AGTGCGCAGGGCTTTCTAGTATTTTACTGAAGATAGAGTAGATGTCCATG
EV527676       <-- AGTGCGCAGGGCTTTCTAGTATTTTACTGAAGATGGAGTAGATGTCCATG
EY907177       <-- AGTGCGCAGGGCTTTCTAGTATTTTACTGAAGATAGAGTAGATGTCCATG
EX754709       <-- AGTGCGCAGGGCTTTCTAGTATTTTACTGAAGATAGAGTAGATGTCCATG
EX756719       <-- AGTGCGCAGGGCTTTCTAGTATTTTACTGAAGATAGAGTAGATGTCCATG
EY949222       <-- ..................................................
FY429104       <-- ..................................................
EY898653       <-- ..................................................
FD582350       --> AGTGCGCAGGGCTTTCTAGTATTTTACTGAAGATAGAGTAAATGTCCATG
EY935637       --> ..................................................
EY944772       --> AGTGCGCAGGGCTTTCTAGTATTTTACTGAAGATAGAGTAAATGTCCATG
EV531862       --> AGTGCGCAGGGCTTTCTAGTATTTTACTGAAGATGGAGTAGATGTCCATG
EX758981       --> AGTGCGCAGGGCTTTCTAGTATTTTACTGAAGATAGAGTAGATGTCCATG
EX760470       --> AGTGCGCAGGGCTTTCTAGTATTTTACTGAAGATAGAGTAGATGTCCATG
EY895313       --> AGTGCGCAGGGCTTTCTAGTATTTTACTGAAGATAGAGTAGATGTCCATG
FD942497       --> AGTGCGCAGGGCTTTCTAGTATTTTACTGAAGATAGAGTAGATGTCCATG

               551    -    601
UN22942        --> TAAATCATTGTCGAATTTCGTAGGGTTTCCGACAACTGACCCAAAATTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940554       <-- ..................................................
FD578161       <-- TAAATCATTGTCGAATTTCGTAGGGTTTCCGACAACTGGCCCAAAATTAT
EX887023       <-- TAAATCATTGTCGAATTTCGTAGGGTTTCCGACAACTGACCCAAAATTAT
FD533630       <-- TAAATCATTGTCGAATTTCGTAGc..........................
FD559454       <-- TAAATCATTGTCGAATTTCGTAGGGTTTCCGACAACTGACCCAAAATTAT
FD540083       <-- TAAATCATTGTCGAATTTCGTAGGGTTTCCGACAACTGACCCAAAATAAT
FD576366       <-- TAAATCATTGTCGAATTTCGTAGGGTTTCCGACAACTGGCCCAAAATTAT
EY899574       <-- TAAATCATTGTCGAATTTCGTAGGGTTTCCGACAACTGACCCAAAATTAT
EY939763       <-- TAAATCATTGTCGAATTTCGTAGGGTTTCCGACAACTGACCCAAAATTAT
EV527676       <-- TAAATCATTGTCGAATTTCGTAGGGTTTCCGACAACTGACCCAAAATTAT
EY907177       <-- TAAATCATTGTCGAATTTCGTAGGGTTTCCGACAACTGACCCAAAATTAT
EX754709       <-- TAAATCATTGTCGAATTTCGTAGGGTTTCCGACAACTGACCCAAAATTAT
EX756719       <-- TAAATCATTGTCGAATTTCGTAGGGTTTCCGACAACTGACCCAAAATTAT
EY949222       <-- ..................................................
FY429104       <-- ..................................................
EY898653       <-- ..................................................
FD582350       --> TAAATCATTGTCGAATTTCGTAGGGTTTCCGACAACTGGCCCAAAATTAT
EY935637       --> ..................................................
EY944772       --> TAAATCATTGTCGAATTTCGTAGGGTTTCCGACAACTGGCCCAAAATTAT
EV531862       --> TAAATCATTGTCGAATTTCGTAGGGTTTCCGACAACTGACCCAAAATTAT
EX758981       --> TAAATCATTGTCGAATTTCGTAGGGTTTCCGACAACTGACCCAAAATTAT
EX760470       --> TAAATCATTGTCGAATTTCGTAGGGTTTCCGACAACTGACCCAAAATTAT
EY895313       --> TAAATCATTGTCGAATTTCGTAGGGTTTCCGACAACTGACCCAAAATTAT
FD942497       --> TAAATCATTGTCGAATTTCGTAGGGTTTCCGACAACTGACCCAAAATTAT

               601    -    651
UN22942        --> AGCGAGCTTGGAATTAAAAAGCTGAGCAGCATAATTTATCTCTTCATCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940554       <-- ..................................................
FD578161       <-- AGCGAGCTTGGAATTAAAAAGCTGAGCAGCATAATTTATCTCTTCATCAC
EX887023       <-- AGCGAGCTTGGAATTAAAAA..............................
FD533630       <-- ..................................................
FD559454       <-- AGCGAGCTTGGAATTAAAAAGCTGAGCAGCATAATTTATCTCTTCATCAC
FD540083       <-- AGCGAGCTTGGAATTAAAAA..............................
FD576366       <-- AGCGAGCTTGGAATTAAAAAGCTGAGCAGCATAATTTATCTCTTCATCAC
EY899574       <-- AGCGAGCTTGGAATTAAAAAGCTGAGCAGCATAATTTATCTCTTCATCAC
EY939763       <-- AGCGAGCTTGGAATTAAAA-GCTGAGCAGCATAATTTATCTCTTCATCAC
EV527676       <-- AGCGAGCTTGGAATTAAAAAGCTGAGCAGCATAATTTATCTCTTAATCAC
EY907177       <-- AGCGAGCTTGGAATTAAAAAGCTGAGCAGCATAATTTATCTCTTCATCAC
EX754709       <-- AGCGAGCTTGGAATTAAAAAGCTGAGCAGCATAATTTATCTCTTCATCAC
EX756719       <-- AGCGAGCTTGGAATTAAAAAGCTGAGCAGCATAATTTATCTCTTCATCAC
EY949222       <-- ..................................................
FY429104       <-- ..................................................
EY898653       <-- ..................................................
FD582350       --> AGCGAGCTTGGAATTAAAAAGCTGAGCAGCATAATTTATCTCTTCATCAC
EY935637       --> ..................................................
EY944772       --> AGCGAGCTTGGAATTAAAAAGCTGAGCAGCATAATTTATCTCTTCATCAC
EV531862       --> AGCGAGCTTGGAATTAAAAAGCTGAGCAGCATAATTTATCTCTTAATCAC
EX758981       --> AGCGAGCTTGGAATTAAAAAGCTGAGCAGCATAATTTATCTCTTCATCAC
EX760470       --> AGCGAGCTTGGAATTAAAAAGCTGAGCAGCATAATTTATCTCTTCATCAC
EY895313       --> AGCGAGCTTGGAATTAAAAAGCTGAGCAGCATAATTTATCTCTTCATCAC
FD942497       --> AGCGAGCTTGGAATTAAAAAACTGAGCAGCATAATTTATCTCTTCATCAC

               651    -    701
UN22942        --> ATATTTTTTTGTTTTTAACCCTTTGTGATGGTGTACAACCAAGCGGTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940554       <-- ..................................................  Raphanus sativus var. oleiformis
FD578161       <-- ATATTTTTTTGTTTTTAACCCTTTGTGATGGTGTACAACCAAGCGGTGGT  Raphanus sativus cv Rat-Tail Radish #3870
EX887023       <-- ..................................................  Raphanus sativus var. oleiformis
FD533630       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD559454       <-- ATATTTTTT-GTTTTTAACCCTTTGTGATGGTGTACAACCAAGCGGTGGT  Raphanus raphanistrum subsp. landra
FD540083       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD576366       <-- ATATTTTTTTGTTTTTAACCCTTTGTGATGGTGTACAACCAAGCGGTGGT  Raphanus sativus cv Rat-Tail Radish #3870
EY899574       <-- A--TTTTTTTGTTTTTAACCCTTTGTGATGGTGTACAACCAAGCGGTGGT  Raphanus raphanistrum subsp. maritimus
EY939763       <-- ATATTTTTTTGTTTTTAACCCTTTGTGATGGTGTACAACCAAGCGGTGGT  Raphanus sativus cv Early Scarlet Globe
EV527676       <-- ATATTTTTTTGTTTTTAACCCTTTGTGATGGTGTACAACCAAGCGGTGGT  Raphanus raphanistrum subsp. maritimus
EY907177       <-- ATAATTTTTTGTTTTTAACCCTTTGTGATGGTGTACAACCAAGCGGTGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754709       <-- ATAATTTTTTGTTTTTAACCCTTTGTGATGGTGTACAACCAAGCGGTGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX756719       <-- ATAATTTTTTGTTTTTAACCCTTTGTGATGGTGTACAACCAAGCGGTGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949222       <-- ............................TGGTGTACAACCAAGCGGTGGT  Raphanus sativus cv Rat-Tail Radish #3870
FY429104       <-- ..................................................  Raphanus sativus cv GSK3-1
EY898653       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD582350       --> ATATTTTTTTGTTTTTAACCCTTTGTGATGGTGTACAACCAAGCGGTGGT  Raphanus sativus cv Rat-Tail Radish #3870
EY935637       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY944772       --> ATATTTTTTTGTTTTTAACCCTTTGTGATGGTGTACAACCAAGCGGTGGT  Raphanus sativus cv Rat-Tail Radish #3870
EV531862       --> ATATTTTTTTGTTTTTAACCCTTTGTGATGGTGTACAACCAAGCGGTGGT  Raphanus raphanistrum subsp. maritimus
EX758981       --> ATAATTTTTTGTTTTTAACCCTTTGTGATGGTGTACAACCAAGCGGTGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760470       --> ATAATTTTTTGTTTTTAACCCTTTGTGATGGTGTACAACCAAGCGGTGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895313       --> AT--TTTTTTGTTTTTAACCCTTTGTGATGGTGTACAACCAAGCGGTGGT  Raphanus raphanistrum subsp. maritimus
FD942497       --> ATATTTTTTTGTTTTTAACCCTTTGTGATGGTGTACAACCAAGCGGTGGT  Raphanus sativus cv Early Scarlet Globe

               701    -    751
UN22942        --> GTTCCTATCACTCCTATACGTCTTGCTCCAAATCCATACAGTTGCAAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940554       <-- ..................................................
FD578161       <-- GTTCCTATCACTCCTATACGTCTTGCTCCAAATCCATACAGTTGCAAAAC
EX887023       <-- ..................................................
FD533630       <-- ..................................................
FD559454       <-- GTTCCTATCACTCCTATACGTCTTGCTCCAAATCCATACAGTTGCAAAAC
FD540083       <-- ..................................................
FD576366       <-- GTTCCTATCACTCCTATACGTCTTGCTCCAAATCCATACAGTTGCAAAAC
EY899574       <-- GTTCCTATCACTCCTATACGTCTTGC........................
EY939763       <-- GTTCCTATCACTCCTATACGTCTTGCTCCAAATCCATACAGTTGCAAAAC
EV527676       <-- GTTCCTATCACTCCTATACGTCTTGCTCCAAATCCATACAGTTGCAAAAC
EY907177       <-- GTTCCTATCACTCCTATACGTCTTGCTCCAAATCCATACAGTTGCAAAAC
EX754709       <-- GTTCCTATCACTCCTATACGTCTTGCTCCAAATCCATACAGTTGCAAAAC
EX756719       <-- GTTCCTATCACTCCTATACGTCTTGCTCCAAATCCATACAGTTGCAAAAC
EY949222       <-- GT-CCTATCACTCCTATACGTCTTGCTCCAAATCCATACAGTTGCAAAAC
FY429104       <-- ..................................................
EY898653       <-- ..................................................
FD582350       --> GTTCCTATCACTCCTATACGTCTTGCTCCAAATCCATACAGTTGCAAAAC
EY935637       --> ..................................................
EY944772       --> GTTCCTATCACTCCTATACGTCTTGCTCCAAATCCATACAGTTGCAAAAC
EV531862       --> GTTCCTATCACTCCTATACGTCTTGCTCCAAATCCATACAGTTGCAAAAC
EX758981       --> GTTCCTATCACTCCTATACGTCTTGCTCCAAATCCATACAGTTGCAAAAC
EX760470       --> GTTCCTATCACTCCTATACGTCTTGCTCCAAATCCATACAGTTGCAAAAC
EY895313       --> GTTCCTATCACTCCTATACGTCTTGC........................
FD942497       --> GTTCCTATCACTCCTATACGTCTTGCTCCAAATCCATACAGTTGCAAAAC

               751    -    801
UN22942        --> GAAACTGGCAGCAGAGTCAGCCATGAAAGTGGTGAAAGAGTCGACGTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940554       <-- ..................................................  Raphanus sativus var. oleiformis
FD578161       <-- GAAACTGGCAGCAGAGTCAGCCATGAAAGTGGTGAAAGAGTCGACGTCAG  Raphanus sativus cv Rat-Tail Radish #3870
EX887023       <-- ..................................................  Raphanus sativus var. oleiformis
FD533630       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD559454       <-- GAAACTGGCAGCAGAGTCAGCCATGACAGTGGTGAAAGAGTCGACGTCAG  Raphanus raphanistrum subsp. landra
FD540083       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD576366       <-- GAAACTGGCAGCAGAGTCAGCCATGAAAGTGGTGAAAGAGTCGACGTCAG  Raphanus sativus cv Rat-Tail Radish #3870
EY899574       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY939763       <-- GAAACTGGCAGCAGAGTCAGCAATGAAAGTGGTGAAAGAGTCGACGTCAG  Raphanus sativus cv Early Scarlet Globe
EV527676       <-- GAAACTGGCAGCAGAGTCAGCCATGAAAGTGGTGAAAGAGTCGACGTCAG  Raphanus raphanistrum subsp. maritimus
EY907177       <-- GAAACTGGCAGCAGAGTCAGCCATGACAGTGGTGAAAGAGTCGACGTCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754709       <-- GAAACTGGCAGCAGAGTCAGCCATGACAGTGGTGAAAGAGTCGACGTCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX756719       <-- GAAACTGGCAGCAGAGTCAGCCATGACAGTGGTGAAAGAGTCGACGTCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949222       <-- GAAACTGGCAGCAGAGTCAGCCATGAAAGTGGTGAAAGAGTCGACGTCAG  Raphanus sativus cv Rat-Tail Radish #3870
FY429104       <-- ..................................................  Raphanus sativus cv GSK3-1
EY898653       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD582350       --> GAAACTGGCAGCAGAGTCAGCCATGAAAGT....................  Raphanus sativus cv Rat-Tail Radish #3870
EY935637       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY944772       --> GAAACTGGCAGCAGAGTCAGCCATGAAAGTGGTGAAAGAGTCGACGTCAG  Raphanus sativus cv Rat-Tail Radish #3870
EV531862       --> GAAACTGGCAGCAGAGTCAGCCATGAAAGTGGTGAAAGAGTCGACGTCAG  Raphanus raphanistrum subsp. maritimus
EX758981       --> GAAACTGGCAGCAGAGTCAGCCATGACAGTGGTGAAAGAGTCGACGTCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760470       --> GAAACTGGCAGCAGAGTCAGCCATGACAGTGGTGGAAGAGTCGACGTCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895313       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD942497       --> GAAACTGGCAGCAGAGTCAGCCATGAAAGTGGTGAAAGAGTCGACGTCAG  Raphanus sativus cv Early Scarlet Globe

               801    -    851
UN22942        --> TTTTAAGGTGTTGAGCACCAATTCCAAAATATGTGTAAATCAGATCGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940554       <-- ..................................................
FD578161       <-- TTTTAAGGTGTTGAGCAC................................
EX887023       <-- ..................................................
FD533630       <-- ..................................................
FD559454       <-- TTTTAAGGTGTTGAGCACCAATTCCAAAATATGTGTAAATCAGATCGGTG
FD540083       <-- ..................................................
FD576366       <-- TTTTAAGGTGTTGAGCACCAATTCCAAAATATGTGTAAATCAGATCGGTG
EY899574       <-- ..................................................
EY939763       <-- TTTTAAGGTGTTGAGCACCAATTCCAAAATATGTGTAAATCAGATCGGTG
EV527676       <-- TTTTAAGGTGTTGAGCACCAATTCCAAAATATGTGTAAATCAGATCGGTG
EY907177       <-- TTTTAAGGTGTTGAGCACCAATTCCAAAATATGTGTAAATCAGATCGGTG
EX754709       <-- TTTTAAGGTGTTGAGCACCAATTCCAAAATATGTGTAAATCAGATCGGTG
EX756719       <-- TTTTAAGGTGTTGAGCACCAATTCCAAAATATGTGTAAATCAGATCGGTG
EY949222       <-- TTTTAAGGTGTTGAGCACCAATTCCAAAATATGTGTAAATCAGATCGGTG
FY429104       <-- ..................................................
EY898653       <-- ..................................................
FD582350       --> ..................................................
EY935637       --> ..................................................
EY944772       --> TTTTAAGGTGTTGAGCACCAATTCCAAAATATGTGTAAATCAGATCGGTG
EV531862       --> TTTTAAGGTGTTGAGCACCAATTCCAAAATATGTGTAAATCAGATCGGTG
EX758981       --> TTTTAAGGTGTTGAGCACCAATTCCAAAATATGTGTAAATCAGATCGGTG
EX760470       --> TTTTAAGGTGTTGAGCACCAATTCCAAAATATGTGTAAATCAGATCGGTG
EY895313       --> ..................................................
FD942497       --> TTTTAAGGTGTTGAGCACCAATTCCAAAATATGTGTAAATCAGATCGGTG

               851    -    901
UN22942        --> CCTCCTGCGACCACAATGGCTACTCCGTTGGACACTATTCGTTTAGCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940554       <-- ..................................................
FD578161       <-- ..................................................
EX887023       <-- ..................................................
FD533630       <-- ..................................................
FD559454       <-- CCTCCTGCGACCACAATGGCTACTCCGTTGGACACTATTCGTTTAGCCTC
FD540083       <-- ..................................................
FD576366       <-- CCTCCTGCGACCACAATGGCTACTCCGTTGGACACTATTCGTTTAGCCTC
EY899574       <-- ..................................................
EY939763       <-- CCTCCTGCGACCACAATGGCTACTCCGTTGGACACTATTCGTTTAGCCTC
EV527676       <-- CCTCCTGCGACCACAATGGCTACTCCGTTGGACACTATTCGTTTAGCCTC
EY907177       <-- CCTCCTGCGACCACAATGGCTACTCCGTTGGACACTATTCGTTTAGCCTC
EX754709       <-- CCTCCTGCGACCACAATGGCTACTCCGTTGGACACTATTCGTTTAGCCTC
EX756719       <-- CCTCCTGCGACCACAATGGCTACTCCGTTGGACACTATTCGTTTAGCCTC
EY949222       <-- CCTCCTGCGACCACAATGGCTACTCCGTTGGACACTATTCGTTTAGCCTC
FY429104       <-- ..................................................
EY898653       <-- ..................................................
FD582350       --> ..................................................
EY935637       --> ..................................................
EY944772       --> CCTCCTGCGACCACAATGGCTACTCCGTTGGACACTATTCGTTTAGCCTC
EV531862       --> CCTCCTGCGACCACAATGGCTACTCCGTTGGACACTATTCGTTTAGCCTC
EX758981       --> CCTCCTGCGACCACAATGGCTACTCCGTTGGACACTATTCGTTTAGCCTC
EX760470       --> CCTCCTGCGACCACAATGGCTACTCCGTTGGACACTATTCGTTTAGCCTC
EY895313       --> ..................................................
FD942497       --> CCTCCTGCGACCACAATGGCTACTCCGTTGGACACTATTCGTTTAGCCTC

               901    -    951
UN22942        --> TTTTTTTCCTACTAGCTTCTTCAGTCTCTTTATGTAGTCTTGAAAATATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940554       <-- ..................................................
FD578161       <-- ..................................................
EX887023       <-- ..................................................
FD533630       <-- ..................................................
FD559454       <-- TTTTTTTCCTc.......................................
FD540083       <-- ..................................................
FD576366       <-- TTTTTTTCCTc.......................................
EY899574       <-- ..................................................
EY939763       <-- TTTTTTTCCTACTAGCTTCTTCAGTCTCTTTATGTAGTCTTGAAAATc..
EV527676       <-- TTTTTTTCCTACTAGCTTCTTCAGTCTCTTTATGTAGTCTTGAAAATATG
EY907177       <-- TTTTTTTCCTACTAGCTTCTTCAGTCTCTTTATGTAGTCTTGAAAATATG
EX754709       <-- TTTTTTTCCTACTAGCTTCTTCAGTCTCTTTATGTAGTCTTGAAAATATG
EX756719       <-- TTTTTTTCCTACTAGCTTCTTCAGTCTCTTTATGTAGTCTTGAAAATATG
EY949222       <-- TTTTTTTCCTACTAGCTTCTTCAGTCTCTTTATGTAGTCTTGAAAATATG
FY429104       <-- ...........CTAGCTTCTTCAGTCTCTTTATGTAGTCTTGAAAATATG
EY898653       <-- ..................................................
FD582350       --> ..................................................
EY935637       --> ..................................................
EY944772       --> TTTTTTTCCTACTAGCTTCTTCAGTCTCTTTATGTAGTC...........
EV531862       --> TTTTTTTCCTACTAGCTTCTTCAGTCTCTTTATGTAGTCTTGAAAATATG
EX758981       --> TTTTTTTCCTACTAGCTTCTTCAGTCTCTTTATGTAGTCTTGAAAATATG
EX760470       --> TTTTTTTCCTACTAGCTTCTTCAGTCTCTTTATGTAGTCTTGAAAATATG
EY895313       --> ..................................................
FD942497       --> TTTTTTTCCTACTAGCTTCTTCAGTCTCTTTATGTAGTCTTGAAAATATG

               951    -   1001
UN22942        --> ACAATTGGTCCAACATTGGTATGACATCCAATGATTCAGATGTTTCAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940554       <-- ..................................................
FD578161       <-- ..................................................
EX887023       <-- ..................................................
FD533630       <-- ..................................................
FD559454       <-- ..................................................
FD540083       <-- ..................................................
FD576366       <-- ..................................................
EY899574       <-- ..................................................
EY939763       <-- ..................................................
EV527676       <-- ACAATTGGTCCAACATTGGTATGACATCCAATGATTCAGATGTTTCAGGA
EY907177       <-- ACAATTGGTCCAACATTGGTATGACATCCAATGATTCAGATGTTTCAGGA
EX754709       <-- ACAATTGGTCCAACATTGGTATGACATCCAATGATTCAGATGTTTCAGGA
EX756719       <-- ACAATTGGTCCAACATTGGTATGACATCCAATGATTCAGATGTTTCAGGA
EY949222       <-- GCAATTGGTCCAACATTGGTATGACATCCAATGATTCAGATGTTTCAGGA
FY429104       <-- ACAATTGGTCCAACATTGGTATGACATCCAATGATTCAGATGTTTCAGGA
EY898653       <-- ..................................................
FD582350       --> ..................................................
EY935637       --> ..................................................
EY944772       --> ..................................................
EV531862       --> ACAATTGGTCCAACATTGGTATGACATCCAATGATTCAGATGTTTC-GGA
EX758981       --> ACAATTGGTCCAACATTGGTATGACATCCAATGATTCAGATGTTTCAGGA
EX760470       --> ACAATTGGTCCAACATTGGTATGACATCCAATGATTCAGATGTTTCAGGA
EY895313       --> ..................................................
FD942497       --> ACAATTGGTCCAACATTGGTATGACATCCA....................

               1001   -   1051
UN22942        --> TCGAAGCCAGCACCACCCGAGGCAAAAGAGACGCCCGTAAGTAGATCGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940554       <-- ..................................................
FD578161       <-- ..................................................
EX887023       <-- ..................................................
FD533630       <-- ..................................................
FD559454       <-- ..................................................
FD540083       <-- ..................................................
FD576366       <-- ..................................................
EY899574       <-- ..................................................
EY939763       <-- ..................................................
EV527676       <-- TCGAAGCCAGCACCACCCGAAGCAAAAGAGACGCCCGTAAGTAGATCGCT
EY907177       <-- TCGAAGCCAGCACCACCCGAGGCAAAAGAGACGCCCGTAAGTAGATCGCT
EX754709       <-- TCGAAGCCAGCACCACCCGAGGCAAAAGAGACGCCCGTAAGTAGATCGCT
EX756719       <-- TCGAAGCCAGCACCACCCGAGGCAAAAGAGACGCCCGTAAGTAGATCGCT
EY949222       <-- TCGAAGCCAGCACCACCCGAAGCAAAAGAGACGCCCGTAAGTAGATCGCT
FY429104       <-- TCGAAGCCAGCACCACCCGAAGCAAAAGAGACGCCCGTAAGTAGATCGCT
EY898653       <-- .......................................AGTAGATCGCT
FD582350       --> ..................................................
EY935637       --> ..................................................
EY944772       --> ..................................................
EV531862       --> TCG...............................................
EX758981       --> TCGAAGCCAGCACCACCCGAG-CAAAAGAGACGCCCGTAAGTAGATCGCT
EX760470       --> TCGAAGCCAGCACCACCCGAGGCA..........................
EY895313       --> ..................................................
FD942497       --> ..................................................

               1051   -   1101
UN22942        --> ACGTTGTAGTTTGTTTTGTTGTAGTTTCTGGTCTAAATATGCGGGTACTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940554       <-- ..................................................
FD578161       <-- ..................................................
EX887023       <-- ..................................................
FD533630       <-- ..................................................
FD559454       <-- ..................................................
FD540083       <-- ..................................................
FD576366       <-- ..................................................
EY899574       <-- ..................................................
EY939763       <-- ..................................................
EV527676       <-- ACGTTGTAGTTTGTTTTGTTGTAGTTTCTGGTCTAAATATGCGGGTACTA
EY907177       <-- ACGTTGTAGTTTGTTTTGTTGTAGTTTCTGGTCTAAATATGCGGGTACTA
EX754709       <-- ACGTTGTAGTTTGTTTTGTTGTAGTTTCTGGTCTAAATATGCGGGTACTA
EX756719       <-- ACGTTGTAGTTTGTTTTGTTGTAGTTTCTGGTCTAAATATGCGGGTACTA
EY949222       <-- AC--GGTAGTTTGTTTTGTTGTAGTTTCTGGTCTAAATATGCGGGTACTA
FY429104       <-- ACGTTGTAGTTTGTTTTGTTGTAGTTTCTGGTCTAAATATGCGGGTACTA
EY898653       <-- ACGTTGTAGTTTGTTTTGTTGTAGTTTCTGGTCTAAATATGCGGGTACTA
FD582350       --> ..................................................
EY935637       --> ..................................................
EY944772       --> ..................................................
EV531862       --> ..................................................
EX758981       --> ACGTTGTAGTTTGTTTTGTTGTAGTTTCTGGTCTAAATATGCGGGTACTA
EX760470       --> ..................................................
EY895313       --> ..................................................
FD942497       --> ..................................................

               1101   -   1151
UN22942        --> TTTCTTTTACTCCCATATATTTGGATATAAAATCAGAAGCGACCTTTCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940554       <-- ..................................................
FD578161       <-- ..................................................
EX887023       <-- ..................................................
FD533630       <-- ..................................................
FD559454       <-- ..................................................
FD540083       <-- ..................................................
FD576366       <-- ..................................................
EY899574       <-- ..................................................
EY939763       <-- ..................................................
EV527676       <-- TTTCTTTTACTCCCATATATTTGGATATAAAATCAGAAGCGACCTTTCCG
EY907177       <-- TTTCTTTTACTCCCc...................................
EX754709       <-- TTTCTTTTACTCCCATATATTTGGATATAAAATCAGAAGCGACCTTTCCG
EX756719       <-- TTTCTTTTACTCCCATATATTTGGATATAAAATCAGAAGCGACCTTTCCG
EY949222       <-- TTTCTTTTACTCCCATATATTTGGATATAAAATCAGAAGCGACCTTTCCG
FY429104       <-- TTTCTTTTACTCCCATATATTTGGATATAAAATCAGAAGCGACCTTTCCG
EY898653       <-- TTTCTTTTACTCCCATATATTTGGATATAAAATCAGAAGCGACCTTTCCG
FD582350       --> ..................................................
EY935637       --> ..................................................
EY944772       --> ..................................................
EV531862       --> ..................................................
EX758981       --> TTTC..............................................
EX760470       --> ..................................................
EY895313       --> ..................................................
FD942497       --> ..................................................

               1151   -   1201
UN22942        --> TTGCTGAATCTACCGGTGGCTACTCTCGAAGGAAAATCCATTCCATAGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940554       <-- ..................................................
FD578161       <-- ..................................................
EX887023       <-- ..................................................
FD533630       <-- ..................................................
FD559454       <-- ..................................................
FD540083       <-- ..................................................
FD576366       <-- ..................................................
EY899574       <-- ..................................................
EY939763       <-- ..................................................
EV527676       <-- TTGCTGAATCTACCGGTGGCTACTCTCGAAGGAAAATCCATTCCATAGGG
EY907177       <-- ..................................................
EX754709       <-- TTGCTGAATCTACCGGTacctac...........................
EX756719       <-- TTGCTGAATCTACCGGTacctac...........................
EY949222       <-- TTGCTGAATCTACCGGTGGCTACTCTCGAAGGAAAATCCATTCCATAGGG
FY429104       <-- TTGCTGAATCTACCGGTGGCTACTCTGGAAGGAAAATCCATTCCATAGGG
EY898653       <-- TTGCTGAATCTACCGGTGGCTAATCTCGAAGGAAAATCCATTCCATAGGG
FD582350       --> ..................................................
EY935637       --> ..................................................
EY944772       --> ..................................................
EV531862       --> ..................................................
EX758981       --> ..................................................
EX760470       --> ..................................................
EY895313       --> ..................................................
FD942497       --> ..................................................

               1201   -   1251
UN22942        --> GCGATAGTTACTTTTTATCTTTGTCTTTAAATTATTATTATTCCCTGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940554       <-- ..................................................
FD578161       <-- ..................................................
EX887023       <-- ..................................................
FD533630       <-- ..................................................
FD559454       <-- ..................................................
FD540083       <-- ..................................................
FD576366       <-- ..................................................
EY899574       <-- ..................................................
EY939763       <-- ..................................................
EV527676       <-- GCGATAGTTACTTTTTATCTTTGTCTTTAAATTATTATTATTCCCTGTGT
EY907177       <-- ..................................................
EX754709       <-- ..................................................
EX756719       <-- ..................................................
EY949222       <-- GCGATAGTTACTTTTTATCTTTGTCTTTAAATTATTATTATTCCCTGTGT
FY429104       <-- GCGATAGTTACTTTTTATCTTTGTCTTTAAATTATTATTATTCCCTGTGT
EY898653       <-- GCGATAGTTACTTTTTATCTTTGTCTTTAAATTATTATTATTCCCTGTGT
FD582350       --> ..................................................
EY935637       --> ..................................................
EY944772       --> ..................................................
EV531862       --> ..................................................
EX758981       --> ..................................................
EX760470       --> ..................................................
EY895313       --> ..................................................
FD942497       --> ..................................................

               1251   -   1301
UN22942        --> CGAATATCGAATCCCCAAAGAAAAACACGGCCGGTATGGTTTTGTTTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940554       <-- ..................................................
FD578161       <-- ..................................................
EX887023       <-- ..................................................
FD533630       <-- ..................................................
FD559454       <-- ..................................................
FD540083       <-- ..................................................
FD576366       <-- ..................................................
EY899574       <-- ..................................................
EY939763       <-- ..................................................
EV527676       <-- CGAATc............................................
EY907177       <-- ..................................................
EX754709       <-- ..................................................
EX756719       <-- ..................................................
EY949222       <-- CGAATATCGAATCCCCAAAGAAAAACACGGCCGGTATGGTTTTGTTTTCT
FY429104       <-- CGAATATCGAATCCCCAAAGAAAAACACGGCCGGTATGGTTTTGTTTTCT
EY898653       <-- CGAATATCGAATCCCCAAAGAAAAACACGGCCGGTATGGTTTTGTTTTCT
FD582350       --> ..................................................
EY935637       --> ..................................................
EY944772       --> ..................................................
EV531862       --> ..................................................
EX758981       --> ..................................................
EX760470       --> ..................................................
EY895313       --> ..................................................
FD942497       --> ..................................................

               1301   -   1351
UN22942        --> CGCTTAGGTGGTAATGGGGCAGGTGGTCTGGGTTTTGGCGATGGAGTAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940554       <-- ..................................................
FD578161       <-- ..................................................
EX887023       <-- ..................................................
FD533630       <-- ..................................................
FD559454       <-- ..................................................
FD540083       <-- ..................................................
FD576366       <-- ..................................................
EY899574       <-- ..................................................
EY939763       <-- ..................................................
EV527676       <-- ..................................................
EY907177       <-- ..................................................
EX754709       <-- ..................................................
EX756719       <-- ..................................................
EY949222       <-- CGCTTAGGTGGTAATGGGGCAGGTGGTCTGGGTTTTGGCGATGGAGTAGG
FY429104       <-- CGCTTAGGTGGTAATGGGGCAGGTGGTCTGGGTTTTGGCGATGGAGTAGG
EY898653       <-- CGCTTAGGTGGTAATGGGGCAGGTGGTCTGGGTTTTGGCGATGGAGTAGG
FD582350       --> ..................................................
EY935637       --> ..................................................
EY944772       --> ..................................................
EV531862       --> ..................................................
EX758981       --> ..................................................
EX760470       --> ..................................................
EY895313       --> ..................................................
FD942497       --> ..................................................

               1351   -   1401
UN22942        --> TGGGCTAGGTTTTGGCGATGGAGTAGGTGGTGGCACAGGTTTCGGAGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940554       <-- ..................................................
FD578161       <-- ..................................................
EX887023       <-- ..................................................
FD533630       <-- ..................................................
FD559454       <-- ..................................................
FD540083       <-- ..................................................
FD576366       <-- ..................................................
EY899574       <-- ..................................................
EY939763       <-- ..................................................
EV527676       <-- ..................................................
EY907177       <-- ..................................................
EX754709       <-- ..................................................
EX756719       <-- ..................................................
EY949222       <-- TGGGCTAGGTTTTGGCGATGGAGTAGGTGGTGGCACAGGTTTCGGAGCTG
FY429104       <-- TGGGCTAGGTTTTGGCGATGGAGTAGGTGGTGGCACAGGTTTCGGAGCTG
EY898653       <-- TGGGCTAGGTTTTGGCGATGGAGTAGGTGGTGGCACAGGTTTCGGAGCTG
FD582350       --> ..................................................
EY935637       --> ..................................................
EY944772       --> ..................................................
EV531862       --> ..................................................
EX758981       --> ..................................................
EX760470       --> ..................................................
EY895313       --> ..................................................
FD942497       --> ..................................................

               1401   -   1451
UN22942        --> GACTAGGTGGTTTAGGTGGTGGGCCTGGCTTTGGTGATGGAGCAGGTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940554       <-- ..................................................
FD578161       <-- ..................................................
EX887023       <-- ..................................................
FD533630       <-- ..................................................
FD559454       <-- ..................................................
FD540083       <-- ..................................................
FD576366       <-- ..................................................
EY899574       <-- ..................................................
EY939763       <-- ..................................................
EV527676       <-- ..................................................
EY907177       <-- ..................................................
EX754709       <-- ..................................................
EX756719       <-- ..................................................
EY949222       <-- GACTAGGTGGTTTAGGTGGTGGGCCTGGCTTTGGTGc.............
FY429104       <-- GACTAGGTGGTTTAGGTGGTGGGCCTGGCTTTGGTGATGGAGCAGGTGCT
EY898653       <-- GACTAGGTGGTTTAGGTGGTGGGCCTGGCTTTGGTGATGGAGCAGGTGCT
FD582350       --> ..................................................
EY935637       --> ..................................................
EY944772       --> ..................................................
EV531862       --> ..................................................
EX758981       --> ..................................................
EX760470       --> ..................................................
EY895313       --> ..................................................
FD942497       --> ..................................................

               1451   -   1501
UN22942        --> GGTGGTGGCTTTGGTTGCGGTTTTGGTGGTTGAGGTGGGCATGGAGACGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940554       <-- ..................................................
FD578161       <-- ..................................................
EX887023       <-- ..................................................
FD533630       <-- ..................................................
FD559454       <-- ..................................................
FD540083       <-- ..................................................
FD576366       <-- ..................................................
EY899574       <-- ..................................................
EY939763       <-- ..................................................
EV527676       <-- ..................................................
EY907177       <-- ..................................................
EX754709       <-- ..................................................
EX756719       <-- ..................................................
EY949222       <-- ..................................................
FY429104       <-- GGTGGTGGCTTTGGTTGCGGTTTTGGTGGTTGAGGTGGGCATGGAGACGG
EY898653       <-- GGTGGTGGCTTTGGTTGCGGTTTTGGTGGTTGAGGTGGGCATGGAGACGG
FD582350       --> ..................................................
EY935637       --> ..................................................
EY944772       --> ..................................................
EV531862       --> ..................................................
EX758981       --> ..................................................
EX760470       --> ..................................................
EY895313       --> ..................................................
FD942497       --> ..................................................

               1501   -   1551
UN22942        --> GGCAGGTGCTGGTGGTGGCTTTGGCTGAGGCTTAGGTGGTATTGGTGGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940554       <-- ..................................................
FD578161       <-- ..................................................
EX887023       <-- ..................................................
FD533630       <-- ..................................................
FD559454       <-- ..................................................
FD540083       <-- ..................................................
FD576366       <-- ..................................................
EY899574       <-- ..................................................
EY939763       <-- ..................................................
EV527676       <-- ..................................................
EY907177       <-- ..................................................
EX754709       <-- ..................................................
EX756719       <-- ..................................................
EY949222       <-- ..................................................
FY429104       <-- GGCAGGTGCTGGTGGTGGCTTTAGCTGAGGCTTAGGTGGTATTGGTGGAC
EY898653       <-- GGCAGGTGCTGGTGGTGGCTTTGGCTGAGGCTTAGGTGGTATTGGTGGAC
FD582350       --> ..................................................
EY935637       --> ..................................................
EY944772       --> ..................................................
EV531862       --> ..................................................
EX758981       --> ..................................................
EX760470       --> ..................................................
EY895313       --> ..................................................
FD942497       --> ..................................................

               1551   -   1601
UN22942        --> ATGGAGATGGACCAGGGGCTGGTGGTGGTTTTGGTTGAGGCTTAGGTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940554       <-- ..................................................
FD578161       <-- ..................................................
EX887023       <-- ..................................................
FD533630       <-- ..................................................
FD559454       <-- ..................................................
FD540083       <-- ..................................................
FD576366       <-- ..................................................
EY899574       <-- ..................................................
EY939763       <-- ..................................................
EV527676       <-- ..................................................
EY907177       <-- ..................................................
EX754709       <-- ..................................................
EX756719       <-- ..................................................
EY949222       <-- ..................................................
FY429104       <-- ATGGAGATGGACCAGGGGCTGGTGGTGGTTTTGGTTGAGGCTTAGGTGGT
EY898653       <-- ATGGAGATGGACCAGGGGCTGGTGGTGGTTTTGGTTGAGGCTTAGGTGGT
FD582350       --> ..................................................
EY935637       --> ..................................................
EY944772       --> ..................................................
EV531862       --> ..................................................
EX758981       --> ..................................................
EX760470       --> ..................................................
EY895313       --> ..................................................
FD942497       --> ..................................................

               1601   -   1651
UN22942        --> ATTGGTGGACATGCCGGTGGACCAGGGGCTGGTGGTGGCTTTGGTTGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940554       <-- ..................................................
FD578161       <-- ..................................................
EX887023       <-- ..................................................
FD533630       <-- ..................................................
FD559454       <-- ..................................................
FD540083       <-- ..................................................
FD576366       <-- ..................................................
EY899574       <-- ..................................................
EY939763       <-- ..................................................
EV527676       <-- ..................................................
EY907177       <-- ..................................................
EX754709       <-- ..................................................
EX756719       <-- ..................................................
EY949222       <-- ..................................................
FY429104       <-- ATTGGTGGACATGCCGGTGGACCAGGGGCTGGTGGTGGCTTTGGTTGAGG
EY898653       <-- ATTGGTGGACATGCCGGTGGACCAGGGGCTGGTGGTGGCTTTGGTTGAGG
FD582350       --> ..................................................
EY935637       --> ..................................................
EY944772       --> ..................................................
EV531862       --> ..................................................
EX758981       --> ..................................................
EX760470       --> ..................................................
EY895313       --> ..................................................
FD942497       --> ..................................................

               1651   -   1701
UN22942        --> CTTAGGTGGTATTGGTGGACATGGAGATGGACCAGGGGCTGGTGGTGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940554       <-- ..................................................
FD578161       <-- ..................................................
EX887023       <-- ..................................................
FD533630       <-- ..................................................
FD559454       <-- ..................................................
FD540083       <-- ..................................................
FD576366       <-- ..................................................
EY899574       <-- ..................................................
EY939763       <-- ..................................................
EV527676       <-- ..................................................
EY907177       <-- ..................................................
EX754709       <-- ..................................................
EX756719       <-- ..................................................
EY949222       <-- ..................................................
FY429104       <-- CTTAGGTGGTATTGGTGGACATGGAGATGGACCAGGGGCTGGTGGTGGTT
EY898653       <-- C.................................................
FD582350       --> ..................................................
EY935637       --> ..................................................
EY944772       --> ..................................................
EV531862       --> ..................................................
EX758981       --> ..................................................
EX760470       --> ..................................................
EY895313       --> ..................................................
FD942497       --> ..................................................

               1701   -   1751
UN22942        --> TTGGTTGAGGCTTAGGTGGTATTGGTGGACACGCCGATGGACCAGGCGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940554       <-- ..................................................
FD578161       <-- ..................................................
EX887023       <-- ..................................................
FD533630       <-- ..................................................
FD559454       <-- ..................................................
FD540083       <-- ..................................................
FD576366       <-- ..................................................
EY899574       <-- ..................................................
EY939763       <-- ..................................................
EV527676       <-- ..................................................
EY907177       <-- ..................................................
EX754709       <-- ..................................................
EX756719       <-- ..................................................
EY949222       <-- ..................................................
FY429104       <-- TTGGTTGAGGCTTAGGTGGTATTGGTGGACACGCCGATGGACCAGGCGCT
EY898653       <-- ..................................................
FD582350       --> ..................................................
EY935637       --> ..................................................
EY944772       --> ..................................................
EV531862       --> ..................................................
EX758981       --> ..................................................
EX760470       --> ..................................................
EY895313       --> ..................................................
FD942497       --> ..................................................

               1751   -   1801
UN22942        --> GGTGGTGGCTTTGGTTGCGGCTTAGGTGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD940554       <-- ...............................
FD578161       <-- ...............................
EX887023       <-- ...............................
FD533630       <-- ...............................
FD559454       <-- ...............................
FD540083       <-- ...............................
FD576366       <-- ...............................
EY899574       <-- ...............................
EY939763       <-- ...............................
EV527676       <-- ...............................
EY907177       <-- ...............................
EX754709       <-- ...............................
EX756719       <-- ...............................
EY949222       <-- ...............................
FY429104       <-- GGTGGTGGCTTTGGTTGCGGCTTAGGTGGTG
EY898653       <-- ...............................
FD582350       --> ...............................
EY935637       --> ...............................
EY944772       --> ...............................
EV531862       --> ...............................
EX758981       --> ...............................
EX760470       --> ...............................
EY895313       --> ...............................
FD942497       --> ...............................