-4     -     46
UN22948        --> .....GGAGCTTTAAGATACCTCAAACCACAAGATATAAAATATTCGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767780       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935955       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV540594       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542803       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD546128       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX769815       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD959263       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY941956       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD976211       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912354       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552539       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD580889       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD984183       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY935130       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD529166       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD528987       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD547229       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571168       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY934341       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD961375       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD935072       <-- ..................................................  Raphanus sativus var. oleiformis
EX766129       --> .....GGAGCTTTAAGATACCTCAAACCACAAGATATAAAATATTCGGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916718       --> .....GGAGCTTTAAGATACCTCAAACCACAAGATATAAAATATTCGGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938145       --> .....GGAGCTTTAAGATACCTCAAACCACAAGATATAAAATATTCGGAT  Raphanus sativus cv Early Scarlet Globe
FD532556       --> .....GGAGCTTTAAGATACCTCAAACCACAAGATATAAAATATTCGGAT  Raphanus raphanistrum subsp. maritimus
FD533790       --> .....GGAGCTTTAAGATACCTCAAACCACAAGATATAAAATATTCGGAT  Raphanus raphanistrum subsp. maritimus
FD550152       --> .....GGAGCTTTAAGATACCTCAAACCACAAGATATAAAATATTCGGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD576390       --> .....GGAGCTTTAAGATACCTCAAACCACAAGATATAAAATATTCGGAC  Raphanus sativus cv Rat-Tail Radish #3870
FD954967       --> .....GGAGCTTTAAGATACCTCAAACCACAAGATATAAAATATTCGGAC  Raphanus sativus cv Rat-Tail Radish #3870
FD965703       --> .....GGAGCTTTAAGATACCTCAAACCACAAGATATAAAATATTCGGAT  Raphanus raphanistrum subsp. maritimus
EV536062       --> .gggtctAGCTTTAAGATACCTCAAACCACAAGATATAAAATATTCGGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV565930       --> ...gggtAGCTTTAAGATACC--AAACCACAAGATATAAAATATTCGGAC  Raphanus raphanistrum subsp. landra
EV570353       --> ggggtctAGCTTTAAGATACCTCAAACCACAAGATATAAAATATTCGGAC  Raphanus raphanistrum subsp. landra
FD955083       --> ggggtctAGCTTTAAGATACCTCAAACCACAAGATATAAAATATTCGGAC  Raphanus sativus cv Rat-Tail Radish #3870
FD971676       --> ...ggctAGCTTTAAGATACCTCAAACCACAAGATATAAAATATT-GGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD988267       --> .ggatctAGCTTTAAGATACCTCAAACCACAAGATATAAAATATTCGGAC  Raphanus raphanistrum subsp. landra
EX903033       --> .....ggtGCTTTAAGATACCTCAAACCACAAGATATAAAATATTCGGAC  Raphanus sativus cv Rat-Tail Radish #3870
FD962790       --> ...........ggAAGATACCTCAAACCACAAGATATAAAATATTCGGAT  Raphanus raphanistrum subsp. maritimus
FD551329       --> ......................................ggATATTCGGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940152       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX755251       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538703       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945738       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD532801       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD954897       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV538888       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD938790       --> ..................................................  Raphanus sativus var. oleiformis
FD580743       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD949001       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD980308       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               46     -     96
UN22948        --> CTTCATTTGCTCTTGCTCTGATCAAATAAGTGTATCATTTGCGGACCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767780       <-- ..................................................
EY935955       <-- ..................................................
EV540594       <-- ..................................................
EV542803       <-- ..................................................
FD546128       <-- ..................................................
EX769815       <-- ..................................................
FD959263       <-- ..................................................
EY941956       <-- ..................................................
FD976211       <-- ..................................................
EY912354       <-- ..................................................
FD552539       <-- ..................................................
FD580889       <-- ..................................................
FD984183       <-- ..................................................
EY935130       <-- ..................................................
FD529166       <-- ..................................................
FD528987       <-- ..................................................
FD547229       <-- ..................................................
EV571168       <-- ..................................................
EY934341       <-- ..................................................
FD961375       <-- ..................................................
FD935072       <-- ..................................................
EX766129       --> CTTCATTTGCTCTTGCTCTGATCAAATAAGTGTATCAT--CCGGACCAAA
EY916718       --> CTTCATTTGCTCTTGCTCTGATCAAATAAGTGTATCATTTGCGGACCATA
EY938145       --> CTTCATTTGCTCTTGCTCTGATCAAATAAGTGTATCATTTGCGGACCATA
FD532556       --> CTTCATTTGCTCTTGCTCTGATCAAATAAGTGTATCATTTGCGGACCAAA
FD533790       --> CTTCATTTGCTCTTGCTCTGATCAAATAAGTGTATCATTTGCGGACCAAA
FD550152       --> CTTCATTTGCTCTTGCTCTGATCAAATAAGTGTATCATTTGCGGACCATA
FD576390       --> CTTCATTTGCTCTTGCTCTGATCAAATAAGTGTATCATTTGCGGACCAAA
FD954967       --> CTTCATTTGCTCTTGCTCTGATCAAATAAGTGTATCATTTGCGGACCAAA
FD965703       --> CTTCATTTGCTCTTGCTCTGATCAAATAAGTGTATCATTTGCGGACCAAA
EV536062       --> CTTCATTTGCTCTTGCTCTGATCAAATAAGTGTATCATTTGCGGACCAAA
EV565930       --> CTTCATTTGCTCTTGCTCTGATCAAATAAGTGTATCATTTGCGTACCAAA
EV570353       --> CTTCATTTGCTCTTGCTCTGATCAAATAAGTGTATCATTTGCGGACCAAA
FD955083       --> CTTCATTTGCTCTTGCTCTGATCAAATAAGTGTATCATTTGCGGACCAAA
FD971676       --> CTTCATTTGCTCTTGCTCTGATCAAATAAGTGTATCATTTGCGGACCAAA
FD988267       --> CTTCATTTGCTCTTGCTCTGATCAAATAAGTGTATCATTTGCGGACCAAA
EX903033       --> CTTCATTTGCTCTTGCTCTGATCAAATAAGTGTATCATTTGCGGACCAAA
FD962790       --> CTTCATTTGCTCTTGCTCTGATCAAATAAGTGTATCATTTGCGGACCAAA
FD551329       --> CTTCATTTGCTCTTGCTCTGATCAAATAAGTGTATCATTTGCGGACCAAA
EY940152       --> ..ggATTTGCTCTTGCTCTGATCAAATAAGTGTATCATTTGCGGACCATA
EX755251       --> ...............ggCTGATCAAATAAGTGTATCATTTGCGGACCAAA
EV538703       --> .................ggGATCAAATAAGTGTATCATTTGCGGACCAAA
EY945738       --> .....................ggAAATAAGTGTATCATTTGCGGACCAAA
FD532801       --> ..................................................
FD954897       --> ..................................................
EV538888       --> ..................................................
FD938790       --> ..................................................
FD580743       --> ..................................................
FD949001       --> ..................................................
FD980308       --> ..................................................

               96     -    146
UN22948        --> ATTACCGATAAATGGGTATATTTCCGGGGTTTGGTGCCTGGATCAACCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767780       <-- ..................................................
EY935955       <-- ..................................................
EV540594       <-- ..................................................
EV542803       <-- ..................................................
FD546128       <-- ..................................................
EX769815       <-- ..................................................
FD959263       <-- ..................................................
EY941956       <-- ..................................................
FD976211       <-- ..................................................
EY912354       <-- ..................................................
FD552539       <-- ..................................................
FD580889       <-- ..................................................
FD984183       <-- ..................................................
EY935130       <-- ..................................................
FD529166       <-- ..................................................
FD528987       <-- ..................................................
FD547229       <-- ..................................................
EV571168       <-- ..................................................
EY934341       <-- ..................................................
FD961375       <-- ..................................................
FD935072       <-- ..................................................
EX766129       --> ATTACCGATAAATGGGTATATTTCCGGGGTTTGGTGCCTGGATCAACCTG
EY916718       --> ATTACCGATAAATGGGTATATTTCCGGGGTTTGGTGCCTGGATCAACCTG
EY938145       --> ATTACCGATAAATGGGTATATTTCCGGGGTTTGGTGCCTGGATCAACCTG
FD532556       --> ATTACCGATAAATGGGTATATTTCCGGGGTTTGGTGCCTGGATCAACCTG
FD533790       --> ATTACCGATAAATGGGTATATTTCCGGGGTTTGGTGCCTGGATCAACCTG
FD550152       --> ATTACCGATAAATGGGTATATTTCCGGGGTTTGGTGCCTGGATCAACCTG
FD576390       --> ATTACCGATAAATGGGTATATTTCCGGGGTTTGGTGCCTGGATCAACCTG
FD954967       --> ATTACCGATAAATGGGTATATTTCCGGGGTTTGGTGCCTGGATCAACCTG
FD965703       --> ATTACCGATAAATGGGTATATTTCCGGGGTTTGGTGCCTGGATCAACCTG
EV536062       --> ATTACCGATAAATGGGTATATTTCCGGGGTTTGGTGCCTGGATCAACCTG
EV565930       --> ATTACCGATAAATGGGTATATTTCCGGGGTTTGGTGCCTGGATCAACCTG
EV570353       --> ATTACCGATAAATGGGTATATTTCCGGGGTTTGGTGCCTGGATCAACCTG
FD955083       --> ATTACCGATAAATGGGTATATTTCCGGGGTTTGGTGCCTGGATCAACCTG
FD971676       --> ATTACCGATAAATGGGTATATTTCCGGGGTTTGGTGCCTGGATCAACCTG
FD988267       --> ATTACCGATAAATGGGTATATTTCCGGGGTTTGGTGCCTGGATCAACCTG
EX903033       --> ATTACCGATAAATGGGTATATTTCCGGGGTTTGGTGCCTGGATCAACCTG
FD962790       --> ATTACCGATAAATGGGTATATTTCCGGGGTTTGGTGCCTGGATCAACCTG
FD551329       --> ATTACCGATAAATGGGTATATTTCCGGGGTTTGGTGCCTGGATCAACCTG
EY940152       --> ATTACCGATAAATGGGTATATTTCCGGGGTTTGGTGCCTGGATCAACCTG
EX755251       --> ATTACCAATAAATGGGTATATTTCCGGGGTTTGGTGCCTGGATCAACCTG
EV538703       --> ATTACCGATAAATGGGTATATTTCCGGGGTTTGGTGCCTGGATCAACCTG
EY945738       --> ATTACCGATAAATGGGTATATTTCCGGGGTTTGGTGCCTGGATCAACCTG
FD532801       --> ..................................................
FD954897       --> ..................................................
EV538888       --> ..................................................
FD938790       --> ..................................................
FD580743       --> ..................................................
FD949001       --> ..................................................
FD980308       --> ..................................................

               146    -    196
UN22948        --> AACAGCCAACAACCTCCGAAGGCCGAGTCCAGGAAATCTAAGAATGTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767780       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935955       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV540594       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542803       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD546128       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX769815       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD959263       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY941956       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD976211       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912354       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552539       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD580889       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD984183       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY935130       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD529166       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD528987       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD547229       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571168       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY934341       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD961375       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD935072       <-- ..................................................  Raphanus sativus var. oleiformis
EX766129       --> AACAGCCAACAACCTCCGAAGGCCGAGTCCAGGAAATCTAAGAATGTAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916718       --> AACAGCCAACAACCTCCGAAGGCCGATTCCAGGAAATCTAAGAATGTAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938145       --> AACAGCCAACAACCTCCGAAGGCCGAGTCCAGGAAAT-TAAGAATGTAAA  Raphanus sativus cv Early Scarlet Globe
FD532556       --> AACAGCCAACAACCTCCGAAGGCCGAGTCCAGGAAATCTAAGAATGTAAA  Raphanus raphanistrum subsp. maritimus
FD533790       --> AACAGCCAACAACCTCCGAAGGCCGAGTCCAGGAAATCTAAGAATGTAAA  Raphanus raphanistrum subsp. maritimus
FD550152       --> AACAGCCAACAACCTCCGAAGGCCGAGTCCAGGAAATCTAAGAATGTAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD576390       --> AACAGCCAACAACCTCCGAAGGCCGAGTCCAGGAAATCTAAGAATGTAAA  Raphanus sativus cv Rat-Tail Radish #3870
FD954967       --> AACAGCCAACAACCTCCGAAGGCCGAGTCCAGGAAATCTAAGAATGTAAA  Raphanus sativus cv Rat-Tail Radish #3870
FD965703       --> AACAGCCAACAACCTCCGAAGGCCGAGTCCGAGAAATCTAAGAATGTAAA  Raphanus raphanistrum subsp. maritimus
EV536062       --> AACAGCCAACAACCTCCGAAGGCCGAGTCCAAGAAATCTAAGAATGTAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV565930       --> AACAGCCAACAACCTCCGAAGGCCGAGTCCAGGAAATCTAAGAATGTAAA  Raphanus raphanistrum subsp. landra
EV570353       --> AACAGCCAACAACCTCCGAAGGCCGAGTCCAGGAAATCTAAGAATGTAAA  Raphanus raphanistrum subsp. landra
FD955083       --> AACAGCCAACAACCTCCGAAGGCCGAGTCCAGGAAATCTAAGAATGTAAA  Raphanus sativus cv Rat-Tail Radish #3870
FD971676       --> AACAGCCAACAACCTCCGAAGGCCGAGTCCAAGAAATCTAAGAATGTAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD988267       --> AACAGCCAACAACCTCCGAAGGCCGAGTCCAGGAAATCTAAGAATGTAAA  Raphanus raphanistrum subsp. landra
EX903033       --> AACAGCCAACAACCTCCGAAGGCCGAGTCCAGGAAATCTAAGAATGTAAA  Raphanus sativus cv Rat-Tail Radish #3870
FD962790       --> AACAGCCAACAACCTCCGAAGGCCGAGTCCAAGAAATCTAAGAATGTAAA  Raphanus raphanistrum subsp. maritimus
FD551329       --> AACAGCCAACAACCTCCGAAGGCCGAGTCCAGGAAATCTAAGAATGTAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940152       --> AACAGCCAACAACCTCCGAAGGCCGAGTCCAGGAAATCTAAGAATGTAAA  Raphanus sativus cv Early Scarlet Globe
EX755251       --> AACAGCCAACAACCTCCGAAGGCCGAGTCCAAGAAATCTAAGAATGTAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538703       --> AACAGCCAACAACCTCCGAAGGCCGAGTCCAAGAAATCTAAGAACGTAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945738       --> AACAGCCAACAACCTCCGAAGGCCGAGTCCAGGAAATCTAAGAATGTAAA  Raphanus sativus cv Rat-Tail Radish #3870
FD532801       --> .gCAGCCAACAACCTCCGAAGGCCGAGTCCAAGAAATCTAAGAATGTAAA  Raphanus raphanistrum subsp. maritimus
FD954897       --> ................................GAAATCTAAGAATGTAAA  Raphanus sativus cv Rat-Tail Radish #3870
EV538888       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD938790       --> ..................................................  Raphanus sativus var. oleiformis
FD580743       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD949001       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD980308       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               196    -    246
UN22948        --> ATCAAAGCCAGGGTCAGAGATAAATACCAATGCGGAGAGCGAAGAAACGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767780       <-- ..................................................
EY935955       <-- ..................................................
EV540594       <-- ..................................................
EV542803       <-- ..................................................
FD546128       <-- ..................................................
EX769815       <-- ..................................................
FD959263       <-- ..................................................
EY941956       <-- ..................................................
FD976211       <-- ..................................................
EY912354       <-- ..................................................
FD552539       <-- ..................................................
FD580889       <-- ..................................................
FD984183       <-- ..................................................
EY935130       <-- ..................................................
FD529166       <-- ..................................................
FD528987       <-- ..................................................
FD547229       <-- ..................................................
EV571168       <-- ..................................................
EY934341       <-- ..................................................
FD961375       <-- ..................................................
FD935072       <-- ..................................................
EX766129       --> ATCAAAGCCAGGGTCAGAGATAAATACCAATGCGGAGAGCGAAGAAACGA
EY916718       --> ATCAAAGCCAGGGTCAGAGATAAATACCAGTGCGGAGAGCGAAGAAACGA
EY938145       --> ATCAAAGCCAGGGTCAG-GATAAATACCAGTGCGGAGAGCGAAGAAACGA
FD532556       --> ATCAAAGCCAGGGTCAGAGATAAATACCAATGCGGAGAGCGAAGAAACGA
FD533790       --> ATCAAAGCCAGGGTCAGAGATAAATACCTATGCGGAGAGCGAAGAAACGA
FD550152       --> ATCAAAGCCAGGGTCAGAGATAAATACCAGTGCGGAGAGCGAAGAAACGA
FD576390       --> ATCAAAGCCAGGGTCAGAGATAAATACCAATGCGGAGAGCGAAGAAACGA
FD954967       --> ATCAAAGCCAGGGTCAGAGATAAATACCAATGCGGAGAGCGAAGAAACGA
FD965703       --> ATCAAAGCCAGGGTCAGAGATAAATACCAATGCGGAGAGCGAAGAAACGA
EV536062       --> ATCGAAGCCAGGGTCAGAGATAAATACCAATGCGGAGAGCGAAGAAACGA
EV565930       --> ATCAAAGCCAGGGTCAGAGATAAATACCAATGCGGAGAGCGAAGAAACGA
EV570353       --> ATCAAAGCCAGGGTCAGAGATAAATACCAATGCGGAGAGCGAAGAAACGA
FD955083       --> ATCAAAGCCAGGGTCAGAGATAAATACCAATGCGGAGAGCGAAGAAACGA
FD971676       --> ATCGAAGCCAGGGTCAGAGATAAATACCAATGCGGAGAGCGAAGAAACGA
FD988267       --> ATCAAAGCCAGGGTCAGAGATAAATACCAATGCGGAGAGCGAAGAAACGA
EX903033       --> ATCAAAGCCAGGGTCAGAGATAAATACCAATGCGGAGAGCGAAGAAACGA
FD962790       --> ATCAAAGCCAGGGTCAGAGATAAATACCAATGCGGAGAGCGAAGAAACGA
FD551329       --> ATCAAAGCCAGGGTCAGAGATAAATACCAATGCGGAGAGCGAAGAAACGA
EY940152       --> ATCAAAGCCAGGGTCAGAGATAAATACCAGTGCGGAGAGCGAAGAAACGA
EX755251       --> ATCAAAGCCAGGGTCAGAGATAAATACCAATGCGGAGAGCGAAGAAACGA
EV538703       --> ATCGAAGCCAGGGTCAGAGATAAATACCAATGCGGAGAGCGAAGAAACGA
EY945738       --> ATCAAAGCCAGGGTCAGAGATAAATACCAATGCGGAGAGCGAAGAAACGA
FD532801       --> ATCAAAGCCAGGGTCAGAGATAAACACCAATGCGGAGAGCGAAGAAACGA
FD954897       --> ATCAAAGCCAGGGTCAGAGATAAATACCAATGCGGAGAGCGAAGAAACGA
EV538888       --> ..................................................
FD938790       --> ..................................................
FD580743       --> ..................................................
FD949001       --> ..................................................
FD980308       --> ..................................................

               246    -    296
UN22948        --> AGAGGCAATTAAAGATGTGGAGAGCTGAAGAGAAGAAATGGCCATGGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767780       <-- ..................................................
EY935955       <-- ..................................................
EV540594       <-- ..................................................
EV542803       <-- ..................................................
FD546128       <-- ..................................................
EX769815       <-- ..................................................
FD959263       <-- ..................................................
EY941956       <-- ..................................................
FD976211       <-- ..................................................
EY912354       <-- ..................................................
FD552539       <-- ..................................................
FD580889       <-- ..................................................
FD984183       <-- ..................................................
EY935130       <-- ..................................................
FD529166       <-- ..................................................
FD528987       <-- ..................................................
FD547229       <-- ..................................................
EV571168       <-- ..................................................
EY934341       <-- ..................................................
FD961375       <-- ..................................................
FD935072       <-- ..................................................
EX766129       --> AGAGGCAATTAAAGATGTGGAGAGCTGAAGAGAAGAAATGGCCATGGCTG
EY916718       --> AGAGGCAATTAAAGATGTGGAGAGCTGAAGAGAAGAAATGGCCATGGCTG
EY938145       --> AGAGGCAATTAAAGATGTGGAGAGCTGAAGAGAAGAAATGGCCATGGCTG
FD532556       --> AGAGGCAATTAAAGATGTGGAGAGCTGAAGAGAAGAAATGGCCATGGCTG
FD533790       --> AGAGGCAATTAAGGATGTGGAGAGCTGAAGAGAAGAAATGGCCATGGCTG
FD550152       --> AGAGGCAATTAAAGATGTGGAGAGCTGAAGAGAAGAAATGGCCATGGCTG
FD576390       --> AGAGGCAATTAAAGATGTGGAGAGCTGAAGAGAAGAAATGGCCATGGCTG
FD954967       --> AGAGGCAATTAAAGATGTGGAGAGCTGAAGAGAAGAAATGGCCATGGCTG
FD965703       --> AGAGGCAATTAAAGATGTGGAGAGCTGAAGAGAAGAAATGGCCATGGCTG
EV536062       --> AGAGGCAATTAAAGATGTGGAGAGCTGAAGAGAAGAAATGGCCATGGCTG
EV565930       --> AGAGGCAATTAAAGATGTGGAGAGCTGAAGAGAAGAAATGGCCATGGCTG
EV570353       --> AGAGGCAATTAAAGATGTGGAGAGCTGAAGAGAAGAAATGGCCATGGCTG
FD955083       --> AGAGGCAATTAAAGATGTGGAGAGCTGAAGAGAAGAAATGGCCATGGCTG
FD971676       --> AGAGGCAATTAAAGATGTGGAGAGCTGAAGAGAAGAAATGGCCATGGCTG
FD988267       --> AGAGGCAATTAAAGATGTGGAGAGCTGAAGAGAAGAAATGGCCATGGCTG
EX903033       --> AGAGGCAATTAAAGATGTGGAGAGCTGAAGAGAAGAAATGGCCATGGCTG
FD962790       --> AGAGGCAATTAAAGATGTGGAGAGCTGAAGAGAAGAAATGGCCATGGCTG
FD551329       --> AGAGGCAATTAAAGATGTGGAGAGCTGAAGAGAAGAAATGGCCATGGCTG
EY940152       --> AGAGGCAATTAAAGATGTGGAGAGCTGAAGAGAAGAAATGGCCATGGCTG
EX755251       --> AGAGGCAATTAAAGATGTGGAGAGCTGAAGAGAAGAAATGGCCATGGCTG
EV538703       --> AGAGGCAATTAAAGATGTGGAGAGCTGAAGAGAAGAAATGGCCATGGCTG
EY945738       --> AGAGGCAATTAAAGATGTGGAGAGCTGAAGAGAAGAAATGGCCATGGCTG
FD532801       --> AGAGGCAATTAAAGATGTGGAGAGCTGAAGAGAAGAAATGGCCATGGCTG
FD954897       --> AGAGGCAATTAAAGATGTGGAGAGCTGAAGAGAAGAAATGGCCATGGCTG
EV538888       --> .....CAATTAAAGATGTGGAGAGCTGAAGAGAAGAAATGGCCATGGCTG
FD938790       --> .................................gGAAATGGCCATGGCTG
FD580743       --> ......................................gGGCCATGGCTG
FD949001       --> ..................................................
FD980308       --> ..................................................

               296    -    346
UN22948        --> CGAGATTATGCTCCTACCGTGAAGGTGTCCAAATCGAGTGCAGGTGAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767780       <-- CGAGATTATGCTCCTACCGTGAAGGTGTCCAAATCGAGTGCAGGTGAAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935955       <-- ............................................TGAAAC  Raphanus sativus cv Early Scarlet Globe
EV540594       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542803       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD546128       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX769815       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD959263       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY941956       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD976211       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912354       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552539       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD580889       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD984183       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY935130       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD529166       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD528987       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD547229       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571168       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY934341       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD961375       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD935072       <-- ..................................................  Raphanus sativus var. oleiformis
EX766129       --> CGAGATTATGCTCCTACCGTGAAGGTGTCCAAATCGAGTGCAGGTGAAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916718       --> CGAGATTATGCTCCTACCTTGAAGGTGTCCAAATCGAGTATAGGTGAAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938145       --> CGAGATTATGCTCCTACCGTGAAGGTGTCCAAATCGAGTATAGGTGAAAC  Raphanus sativus cv Early Scarlet Globe
FD532556       --> CGAGATTATGCTCCTACCGTGAAGGTGTCCAAATCGAGTGCAGGTGAAAC  Raphanus raphanistrum subsp. maritimus
FD533790       --> CGAGATTATGCTCCTACCGTGAAGGTGTCCAAATCGAGTGCAGGTGAAAC  Raphanus raphanistrum subsp. maritimus
FD550152       --> CGAGATTATGCTCCTACCGTGAAGGTGTCCAAATTGAGTATAGGTGAAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD576390       --> CGAGATTATGCTCCTACCGTGAAGGTGTCCAAATCGAGTGCAGGTGAAAC  Raphanus sativus cv Rat-Tail Radish #3870
FD954967       --> CGAGATTATGCTCCTACCGTGAAGGTGTCCAAATCGAGTGCAGGTGAAAC  Raphanus sativus cv Rat-Tail Radish #3870
FD965703       --> CGAGATTATGCTCCTACCGTGAAGGTGTCCAAATCGAGTGCAGGTGAAAC  Raphanus raphanistrum subsp. maritimus
EV536062       --> CGAGATTATGCTCCTACCGTGAAGGTGTCCAAATCGAGTGCAGGTGAAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV565930       --> CGAGATTATGCTCCTACCGTGAAGGTGTCCAAATCGAGTGCAGGTGAAAC  Raphanus raphanistrum subsp. landra
EV570353       --> CGAGATTATGCTCCTACCGTGAAGGTGTCCAAATCGAGTGCAGGTGAAAC  Raphanus raphanistrum subsp. landra
FD955083       --> CGAGATTATGCTCCTACCGTGAAGGTGTCCAAATCGAGTGCAGGTGAAAC  Raphanus sativus cv Rat-Tail Radish #3870
FD971676       --> CGAGATTATGCTCCTCCCGTGAAGGTG-CCAAATCGAGTGCAGGTGAA-C  Raphanus raphanistrum subsp. raphanistrum (MS)
FD988267       --> CGAGATTATGCTCCTACCGTGAAGGTGTCCAAATCGAGTGCAGGTGAAAC  Raphanus raphanistrum subsp. landra
EX903033       --> CGAGATTATGCTCCTACCGTGAAGGTGTCCGAATCGAGTGCAGGTGAAAC  Raphanus sativus cv Rat-Tail Radish #3870
FD962790       --> CGAGATTATGCTCCTACCGTGAAGGTGTCCAAATCGAGTGCAGGTGAAAC  Raphanus raphanistrum subsp. maritimus
FD551329       --> CGAGATTATGCTCCTACCGTGAAGGTGTCCAAATCGAGTGCAGGTGAAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940152       --> CGAGATTATGCTCCTACCGTGAAGGTGTCCAAATCGAGTATAGGTGAAAC  Raphanus sativus cv Early Scarlet Globe
EX755251       --> CGAGATTATGCTCCTACCGTGAAGGTGTCCAAATCGAGTGCAGGTGAAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538703       --> CGAGATTATGCTCCTACCGTGAAGGTGTCCAAATCGAGTGCAGGTGGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945738       --> CGAGATTATGCTCCTACCGTGAAGGTGTCCAAATCGAGTGCAGGTGAAAC  Raphanus sativus cv Rat-Tail Radish #3870
FD532801       --> CGAGATTATGCTCCTACCGTGAAGGTGTCCAAATCGAGTGCAGGTGAAAC  Raphanus raphanistrum subsp. maritimus
FD954897       --> CGAGATTATGCTCCTACCGTGAAGGTGTCCAAATCGAGTGCAGGTGAAAC  Raphanus sativus cv Rat-Tail Radish #3870
EV538888       --> CGAGATTATGCTCCTACCGTGAAGGTGTCCAAATCGAGTGCAGGTGAAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD938790       --> CGAGATTATGCTCCTACCGTGAAGGTGTCCAAATCGAGTGCAGGTGAAAC  Raphanus sativus var. oleiformis
FD580743       --> CGAGATTATGCTCCTACCGTGAAGGTGTCCAAATCGAGTGCAGGTGAAAC  Raphanus sativus cv Rat-Tail Radish #3870
FD949001       --> ..............gACCGTGAAGGTGTCCAAATCGAGTATAGGTGAAAC  Raphanus sativus cv Early Scarlet Globe
FD980308       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               346    -    396
UN22948        --> CCATTTGAAGATGGACTTTTCAATAGGATTGCCTCCTGAGACAGTCTTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767780       <-- CCATTTGAAGATGGACTTTTCAATAGGATTGCCTCCTGAGACGGTCTTCG
EY935955       <-- CCATTTGAAGATGGACTTTTCAATAGGATTGCCTCCTGAGACAGTCTTCG
EV540594       <-- .......................................GACAGTCTTCG
EV542803       <-- .......................................GACAGTCTTCG
FD546128       <-- .......................................GACAGTCTTCG
EX769815       <-- ........................................ACAGTCTTCG
FD959263       <-- ..................................................
EY941956       <-- ..................................................
FD976211       <-- ..................................................
EY912354       <-- ..................................................
FD552539       <-- ..................................................
FD580889       <-- ..................................................
FD984183       <-- ..................................................
EY935130       <-- ..................................................
FD529166       <-- ..................................................
FD528987       <-- ..................................................
FD547229       <-- ..................................................
EV571168       <-- ..................................................
EY934341       <-- ..................................................
FD961375       <-- ..................................................
FD935072       <-- ..................................................
EX766129       --> CCATTTGAAGATGGACTTTTCAATAGGATTGCCTCCTGAGACAGTCTTCG
EY916718       --> CCATTTGAAGATGGACTTTTCAATAGGATTGCCTCCTGAGACAGTCTTCG
EY938145       --> CCATTTGAAGATGGACTTTTCAATAAGATTGCCTCCTGAGACAGTCTTCG
FD532556       --> CCATTTGAAGATGGACTTTTCAATAGGATTGCCTCCTGAGACAGTCTTCG
FD533790       --> CCATTTGAAGATGGACTTTTCAATAGGATTGCCTCCTGAGACAGTCTTCG
FD550152       --> CCATTTGAAGATGGACTTTTCAATAGGATTGCCTCCTGAGACAGTCTTCG
FD576390       --> CCATTTGAAGGTGGACCTTTCAATAGGATTGCCTCCTGAGACAGTCTTCG
FD954967       --> CCATTTGAAGATGGACTTTTCAATAGGATTGCCTCCTGAGACAGTCTTCG
FD965703       --> CCATTTGAAGATGGACTTTTCAATAGGATTGCCTCCTGAGACAGTCTTCG
EV536062       --> CCATTTGAAGATGGACTTTTCAATAGGATTGCCTCCTGAGACAGTCTTCG
EV565930       --> CCATTTGAAGATGGACTTTTCAATAGGATTGCCTCCTGAGACAGTCTTCG
EV570353       --> CCATTTGAAGATGGACTTTTCAATAGGATTGCCTCCTGAGACATTCTTCG
FD955083       --> CCATTTGAAGATGGACTTTTCAATAGGATTGCCTCCTGAGACAGTCTTCG
FD971676       --> CCATTTGAAGATGGACTTTTCA-TAGGATTGCCTCCTGAGACAGTCTTCG
FD988267       --> CCATTTGAAGATGGACTTTTCAATAGGATTGCCTCCTGAGACAGTCTTCG
EX903033       --> CCATTTGAAGATGGACTTTTCAATAGGATTGCCTCCTGAGACAGTCTTCG
FD962790       --> CCATTTGAAGATGGACTTTTCAATAGGATTGCCTCCTGAGACAGTCTTCG
FD551329       --> CCATTTGAAGATGGACTTTTCAATAGGATTGCCTCCTGAGACAGTCTTCG
EY940152       --> CCATTTGAAGATGGACTTTTCAATAGGATTGCCTCCTGAGACAGTCTTCG
EX755251       --> CCATTTGAAGATGGACTTTTCAATAGGATTGCCTCCTGAGACAGTCTTCG
EV538703       --> CCATTTGAAGATGGACTTTTCAATAGGATTGCCTCCTGAGACAGTCTTCG
EY945738       --> CCATCTGAAGATGGACTTTTCAATAGGATTGCCTCCTGAGACAGTCTTCG
FD532801       --> CCATTTGAAGATGGACTTTTCAATAGGATTGCCTCCTGAGACAGTCTTCG
FD954897       --> CCATTTGAAGATGGACTTTTCAATAGGATTGCCTCCTGAGACAGTCTTCG
EV538888       --> CCATTTGAAGATGGACTTTTCAATAGGATTGCCTCCTGAGACAGTCTTCG
FD938790       --> CCATTTGAAGATGGACTTTTCAATAGGATTGCCTCCTGGGACAGTCTTCG
FD580743       --> CCATTTGAAGATGGACTTTTCAATAGGATTGCCTCCTGAGACAGTCTTCG
FD949001       --> CCATTTGAAGATGGACTTTTCAATAGGATTGCCTCCTGAGACAGTCTTCG
FD980308       --> ..................................................

               396    -    446
UN22948        --> ATATTATAACTAGTCACGACAACCAAACATATTCTTACTTCAAACAAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767780       <-- ATATTATAACTAGTCACGACAACCAAACATATTCTTACTTCAAACAAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935955       <-- ATATTATAACTAGTCACGACAACCAAACATATTCCTACTTCATACAAATG  Raphanus sativus cv Early Scarlet Globe
EV540594       <-- ATATTATAACTAGTCACGACAACCAAACATATTCTTACTTCAAACAAATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542803       <-- ATATTATAACTAGTCACGACAACCAAACATATTCTTACTTCAAACAAATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD546128       <-- ATATTATAACTAGTCACGACAACCAAACATATTCTTACTTCATACAAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX769815       <-- ATATTATAACTAGTCACGACAACCAAACATATTCTTACTTCAAACAAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD959263       <-- ...TTATAACTAGTCACGACAACCAAACATATTCTTACTTCAAACAAATG  Raphanus raphanistrum subsp. maritimus
EY941956       <-- .....ATAACTAGTCACGACAACCAAACATACTCTTACTTCAAACAAATG  Raphanus sativus cv Rat-Tail Radish #3870
FD976211       <-- ..................gCAACCAAACATATTCTTACTTCATACAAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912354       <-- ..............................ATTCTTACTTCATACAAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552539       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD580889       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD984183       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY935130       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD529166       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD528987       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD547229       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571168       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY934341       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD961375       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD935072       <-- ..................................................  Raphanus sativus var. oleiformis
EX766129       --> ATATTATAACTAGTCACGACAACCAAACATATTCTTACTTCAAACAAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916718       --> ATATTATAACTAGTCACGACAACCAAACATATTCTTACTTCATACAAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938145       --> ATATTATAACTAGTCACGACAACCAAACATATTCTTACTTCATACAAAT.  Raphanus sativus cv Early Scarlet Globe
FD532556       --> ATATTATAACTAGTCACGACAACCAAACATATTCTTACTTCAAACAAATG  Raphanus raphanistrum subsp. maritimus
FD533790       --> ATATTATAACTAGTCACGACAACCAAACATATTCTTACTTCAAACAAATG  Raphanus raphanistrum subsp. maritimus
FD550152       --> ATATTATAACTAGTCACGACAACCAAACATATTCTTACTTCATACAAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD576390       --> ATATTATAACTAGTCACGACAACCAAACATATTCTTACTTCAAACAAATG  Raphanus sativus cv Rat-Tail Radish #3870
FD954967       --> ATATTATAACTAGTCACGGCAACCAAACATATTCTTACTTCAAACAAATG  Raphanus sativus cv Rat-Tail Radish #3870
FD965703       --> ATATTATAACTAGTCACGACAACCAAACATATTCTTACTTCAAACAAATG  Raphanus raphanistrum subsp. maritimus
EV536062       --> ATATTATAACTAGTCACGACAACCAAACATATTCTTACTTCAAACAAATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV565930       --> ATATTATAACTAGTCACGACAACCAAACATATTCTTACTTCAAACAAATG  Raphanus raphanistrum subsp. landra
EV570353       --> ATATTATAACTAGTCACGACAACCAAACATATTCTTACTTCAAACAAATG  Raphanus raphanistrum subsp. landra
FD955083       --> ATATTATAACTAGTCACGACAACCAAACATATTCTTACTTCAAACAAATG  Raphanus sativus cv Rat-Tail Radish #3870
FD971676       --> ATATTATAACTAGTCACGACAACCAAACATATTCTTACTTCAAcaaa...  Raphanus raphanistrum subsp. raphanistrum (MS)
FD988267       --> ATATTATAACTAGTCACGACAACCAAACATATTCTTACTTCAAACAAATG  Raphanus raphanistrum subsp. landra
EX903033       --> ATATTATAACTAGTCACGACAACCAAACATATTCTTACTTCAAACAAATG  Raphanus sativus cv Rat-Tail Radish #3870
FD962790       --> ATATTATAACTAGTCACGACAACCAAACATATTCTTACTTCAAACAAATG  Raphanus raphanistrum subsp. maritimus
FD551329       --> ATATTATAACTAGTCACGACAACCAAACATATTCTTACTTCAAACAAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940152       --> ATATTATAACTAGTCACGACAACCAAACATATTCCTACTTCATACAAATG  Raphanus sativus cv Early Scarlet Globe
EX755251       --> ATATTATAACTAGTCACGACAACCAAACATATTCTTACTTCAAACAAATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538703       --> ATATTATAACTAGTCACGACAACCAAACATATTCTTACTTCAAACAAATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945738       --> ATATTATAACTAGTCACGACAACCAAACATACTCTTACTTCAAACAAATG  Raphanus sativus cv Rat-Tail Radish #3870
FD532801       --> ATATTATAACTAGTCACGACAACCAAACATATTCTTACTTCAAACAAATG  Raphanus raphanistrum subsp. maritimus
FD954897       --> ATATTATAACTAGTCACGACAACCAAACATATTCTTACTTCAAACAAATG  Raphanus sativus cv Rat-Tail Radish #3870
EV538888       --> ATATTATAACTAGTCACGACAACCAAACATATTCTTACTTCAAACAAATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD938790       --> ATATTATAACTAGTCACGACAACCAAACATATTCTTACTTCAAACAAATG  Raphanus sativus var. oleiformis
FD580743       --> ATATTATAACTAGTCACGACAACCAAACATATTCTTACTTCAAACAAATG  Raphanus sativus cv Rat-Tail Radish #3870
FD949001       --> ATATTATAACTAGTCACGACAACCAAACATATTCTTACTTCATACAAATG  Raphanus sativus cv Early Scarlet Globe
FD980308       --> ..................gCAACCAAACATATTCTTACTTCATACAAATG  Raphanus raphanistrum subsp. raphanistrum (NY)

               446    -    496
UN22948        --> AAAAGGCGCAAAATCCTGTCAGTCAAATCAAGCAAG-GTTCTTAGGGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767780       <-- AAAAGGCGCAAAATCCTGTCAGTCAAATCAAGCAAG-GTTCTTAGGGATA
EY935955       <-- AAAAGGCGCAAAATCCTGTCAGTCAAATCAAGCAAG-GTTCTTAGGGATA
EV540594       <-- AAAAGGCGCAAAATCCTGTCAGTCAAATCAAGCAAG-GTTCTTAGGGATA
EV542803       <-- AAAAGGCGCAAAATCCTGTCAGTCAAATCAAGCAAG-GTTCTTAGGGATA
FD546128       <-- AAAAGGCGCAAAATCCTGTCAGTCAAATCAAGCAAG-GTTCTTAGGGATA
EX769815       <-- AAAAGGCGCAAAATCCTGTCAGTCAAATCAAGCAAG-GTTCTTAGGGATA
FD959263       <-- AAAAGGCGCAAAATCCTGTCAGTCAAATCAAGCAAG-GTTCTTAGGGATA
EY941956       <-- AAAAGGCGCAAAATCCTGTCAGTCAAATCAAGCAAG-GTTCTTAGGGATA
FD976211       <-- AAAAGGCGCAAAATCCTGTCAGTCAAATCAAGCAAG-GTTCTTAGGGATA
EY912354       <-- AAAAGGCGCAAAATCCTGTCAGTCAAATCAAGCAAG-GTTCTTAGGGATA
FD552539       <-- ....tttttcttatgaaGTCAGTCAAATCAAGCAAG-GTTCTTAGGGATA
FD580889       <-- ..................................................
FD984183       <-- ..................................................
EY935130       <-- ..................................................
FD529166       <-- ..................................................
FD528987       <-- ..................................................
FD547229       <-- ..................................................
EV571168       <-- ..................................................
EY934341       <-- ..................................................
FD961375       <-- ..................................................
FD935072       <-- ..................................................
EX766129       --> AAAAGGCGCAAAATCCTGTCAGTCAAATCAAGCAAG-GTTCTTAGGGATA
EY916718       --> AAAAGGCGCAAAATCCTGTCAGTCAAATCAAGCAAG-GTTCTTAGGGATA
EY938145       --> ..................................................
FD532556       --> AAAAGGCGCAAAATCCTGTCAGTCAAATCAAGCAAG-GTTCTTAGGGATA
FD533790       --> AAAAGGCGCAAAATCCTGTCAGTCAAATCAAGCAAG-GTTCTTAGGGATA
FD550152       --> AAAAGGCGCAAAATCCTGTCAGTCAAATCAAGCAAG-GTTCTTAGGGATA
FD576390       --> AAAAGGCGCAAAATCCTGTCAGTCAAATCAAGCAAG-GTTCTTAGGGATA
FD954967       --> AAAAGGCGCAAAATCCTGTCAGTCAAATCAAGCAAG-GTTCTTAGGGATA
FD965703       --> AAAAGGCGCAAAATCCTGTCAGTCAAATCAAGCAAG-GTTCTTAGGGATA
EV536062       --> AAAAGGCGCAAAATCCTGTCAGTCAAATCAAGCAAG-GTTCTTAGGGATA
EV565930       --> AAAAGGCGCAAAATCCTGTCAGTCAAATCGAGCAAG-GTTCTTAGGGATA
EV570353       --> AAAAGGCGCAAAATCCTGTCAGTCAAATCAAGCAAG-GTTCTTAGGGATA
FD955083       --> AAAAGGCGCAAAATCCTGTCAGTCAAATCAAGCAAG-GTTCTTAGGGATA
FD971676       --> ..................................................
FD988267       --> AAAAGGCGCAAAATCCTGTCAGTCAAATCAAGCAAG-GTTCTTAGGGATA
EX903033       --> AAAAGGCGCAAAATCCTGTCAGTCAAATCAAGCAAG-GTTCTTAGGGATA
FD962790       --> AAAAGGCGCAAAATCCTGTCAGTCAAATCAAGCAAG-GTTCTTAGGGATA
FD551329       --> AAAAGGCGCAAAATCCTGTCAGTCAAATCAAGCAAG-GTTCTTAGGGATA
EY940152       --> AAAAGGCGCAAAATCCTGTCAGTCAAATCAAGCAAG-GTTCTTAGGGATA
EX755251       --> AAAAGGCGCAAAATCCTGTCAGTCAAATCAAGCAAG-GTTCTTAGGGATA
EV538703       --> AAAAGGCTCAAAATCCTGTCAGTCAAATCAAGCAAGAGTTCTTAGGGATA
EY945738       --> AAAAGGCGCAAAATCCTGTCAGTCAAATCAAGCAAG-GTTCTTAGGGATA
FD532801       --> AAAAGGCGCAAAATCCTGTCAGTCAAATCAAGCAAG-GTTCTTAGGGATA
FD954897       --> AAAAGGCGCAAAATCCTGTCAGTCAAATCAAGCAAG-GTTCTTAGGGATA
EV538888       --> AAAAGGCGCAAAATCCTGTCAGTCAAATCAAGCAAG-GTTCTTAGGGATA
FD938790       --> AAAAGGCGCAAAATCCTGTCA----AATCAAGCAAG-GTTCTTAGGGATA
FD580743       --> AAAAGGCGCAAAATCCTGTCAGTCAAATCAAGCAAG-GTTCTTAGGGATA
FD949001       --> AAAAGGCGCAAAATCCTGTCAGTCAAATCAAGCAAG-GTTCTTAGGGATA
FD980308       --> AAAAGGCGCAAAATCCTGTCAGTCAAATCAAGCAAG-GTTCTTAGGGATA

               496    -    546
UN22948        --> ATGGAAGGGATGAGAAAGTCGTGGTAGTAAAAAAATCTGCGCCATGGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767780       <-- ATGGAAGGGATGAGAAAGTCGTGGTAGTAAAAAAATCTGCGCCATGGAAG
EY935955       <-- ATGGAAGGGATGAGAAAGTCGTGGTAGTAAAAAAATCTGCGCCATGGAAG
EV540594       <-- ATGGAAGAGATGAGAAAGTCGTGGTAGTAAAAAAATCTGCGCCATGGAAG
EV542803       <-- ATGGAAGAGATGAGAAAGTCGTGGTAGTAAAAAAGTCTGCGCCATGGAGG
FD546128       <-- ATGGAAGGGATGAGAAAGTCGTGGTAGTAAAAAAATCTGCGCCATGGAAG
EX769815       <-- ATGGAAGGGATGAGAAAGTCGTGGTAGTAAAAAAATCTGCGCCATGGAAG
FD959263       <-- ATGGAAGGGATGAGAAAGTCGTGGTAGTAAAAAAATCTGCGCCACGGAAG
EY941956       <-- ATGGAAGAGATGAGAAAGTCGTGGTAGTAAAAAAATCTGCGCCATGGAAG
FD976211       <-- ATGGAAGGGATGAGAAAGTCGTGGTAGTAAAAAAATCTGCGCCATGGAAG
EY912354       <-- ATGGAAGGGATGAGAAAGTCGTGGTAGTAAAAAAATCTGCGCCATGGAAG
FD552539       <-- ATGGAAGGGATGAGAAAGTCGTGGTAGTAAAAAAATCTGCGCCATGGAAG
FD580889       <-- .....................TGGTAGTAAAAAAATCTGCGCCATGGAAG
FD984183       <-- ..........................GTAAAAAAATCTGCGCCATGGAAG
EY935130       <-- ...............................AAAATCTGCGCCATGGAAG
FD529166       <-- .........................................CCATGGAAG
FD528987       <-- ..................................................
FD547229       <-- ..................................................
EV571168       <-- ..................................................
EY934341       <-- ..................................................
FD961375       <-- ..................................................
FD935072       <-- ..................................................
EX766129       --> ATGGAAGGGATGAGAAAGTCGTGGTAGTAAAAAAATCTGCGCCATGGAAG
EY916718       --> ATGGAAGGGATGAGAAAGTCGTGGTAGTAAAAAAATCTGCGCCATGGAAG
EY938145       --> ..................................................
FD532556       --> ATGGAAGGGATGAGAAAGTCGTGGTAGTAAAAAAATCTGCGCCATGGAAG
FD533790       --> ATGGAAGGGATGAGAAAGTCGTGGTAGTAAAGAAATCTGCGCCATGGAAG
FD550152       --> ATGGAAGGGATGAGAAAGTCGTGGTAGTAAAAAAATCTGCGCCATGGAAG
FD576390       --> ATGGAAGGGATGAGAAAGTCGTGGTAGTAAAAAAATCTGCGCCATGGAAG
FD954967       --> ATGGAAGGGATGAGAAAGTCGTGGTAGTAAAAAAATCTGCGCCATGGAAG
FD965703       --> ATGGAAGGGATGAGAAAGTCGTGGTAGTAAAAAAA...............
EV536062       --> ATGGAAGAGATGAGAAAGTCGTGGTAGTAAAAAAATCTGCGCCATGGAAG
EV565930       --> ATGGAAGGGATGAGAAAGTCGTGGTAGTAAAAAAATCTGCGCCATGGAAG
EV570353       --> ATGGAAGGGATGAGAAAGTCGTGGTAGTAAAAAAATCTGCGCCATGGAAG
FD955083       --> ATGGAAGGGATGAGAAAGTCGTGGTAGTAAAAAAATCTGCGCCATGGAAG
FD971676       --> ..................................................
FD988267       --> ATGGAAGGGATGAGAAAGTCGTGGTAGTAAAAAAATCTGCGCCATGGAAG
EX903033       --> ATGGAAGGGATGAGAAAGTCGTGGTAGTAAAAAAATCTGCGCCATGGAAG
FD962790       --> ATGGAAGGGATGAGAAAGTCGTGGTAGTAAAAAAATCTGCGCCACGGAAG
FD551329       --> ATGGAAGGGATGAGAAAGTCGTGGTAGTAAAAAAATCTGCGCCATGGAAG
EY940152       --> ATGGAAGGGATGAGAAAGTCGTGGTAGTAAAAAAATCTGCGCCATGGAAG
EX755251       --> ATGGAAGGGATGAGAAAGTCGTGGTAGTAAAAAAATCTGCGCCATGGAAG
EV538703       --> ATGGAAGAGATGAGAAAGTCGTGGTAGTAAAAAAATCTGCGCCATGGAAG
EY945738       --> ATGGAAGAGATGAGAAAGTCGTGGTAGTAAAAAAATCTGCGCCATGGAAG
FD532801       --> ATGGAAGGGATGAGAAAGTCGTGGTAGTAAAAAAATCTGCGCCATGGAAG
FD954897       --> ATGGAAGGGATGAGAAAGTCGTGGTAGTAAAAAAATCTGCGCCATGGAAG
EV538888       --> ATGGAAGAGATGAGAAAGTCGTGGTAGTAAAAAAGTCTGCGCCATGGAGG
FD938790       --> ATGGAAGGGATGAGAAAGTCGTGGTAGTAAAAAAATCTGCGCCATGGAAG
FD580743       --> ATGGAAGGGATGAGAAAGTCGTGGTAGTAAAAAAATCTGCGCCATGGAAG
FD949001       --> ATGGAAGGGATGAGAAAGTCGTGGTAGTAAAAAAATCTGCGCCATGGAAG
FD980308       --> ATGGAAGGGATGAGAAAGTCGTGGTAGTAAAAAAATCTGCGCCATGGAAG

               546    -    596
UN22948        --> TTT-CTTCGGTGGAATGGGAAAATGCCATTAGATCTAGTATTCAATGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767780       <-- TTT-CTTCGGTGGAATGGGAAAATGCCATTAGATCTAGTATTCAATGAGA
EY935955       <-- TTT-CTTCGGTGGAATGGGAAAATGCCATTAGATCTAGTATTCAATGAGA
EV540594       <-- TTT-CTTCGGTGGAATGGGAAAATGCCATTAGATCTAGTATTCAATGAGA
EV542803       <-- TTT-CTTCGGTGGAATGGGAAAATGCCATTAGATCTAGTATTCAATGAGA
FD546128       <-- TTT-CTTCGGTGGAATGGGAAAATGCCATTAGATCTAGTATTCAATGAGA
EX769815       <-- TTT-CTTCGGTGGAATGGGAAAATGCCATTAGATCTAGTATTCAATGAGA
FD959263       <-- TTTTCTTCGGTGGAATGGGAAAATGCCATTAGATCTAGTATTCAATGAGA
EY941956       <-- TTT-CTTCGGTGGAATGGGAAAATGCCATTAGATCTAGTATTCAATGAGA
FD976211       <-- TTT-CTTCGGTGGAATGGGAAAATGCCATTAGATCTAGTATTCAATGAGA
EY912354       <-- TTT-CTTCGGTGGAATGGGAAAATGCCATTAGATCTAGTATTCAATGAGA
FD552539       <-- TTT-CTTCGGTGGAATGGGAAAATGCCATTAGATCTAGTATTCAATGAGA
FD580889       <-- TTT-CTTCGGTGGAATGGGAAAATGCCATTAGATCTAGTATTCAATGAGA
FD984183       <-- TTT-CTTCGGTGGAATGGGAAAATGCCATTAGATCTAGTATTCAATGAGA
EY935130       <-- TTT-CTTCGGTGGAATGGGAAAATGCCATTAGATCTAGTATTCAATGAGA
FD529166       <-- TTT-CTTCGGTGGAATGGGAAAATGCCATTAGATTTAGTATTCAATGAGA
FD528987       <-- ......TCGGTGGAATGGGAAAATGCCATTAGATCTAGTATTCAATGAGA
FD547229       <-- ......TCGGTGGAATGGGAAAATGCCATTAGATTTAGTATTCAATGAGA
EV571168       <-- ........GGTGGAATGGGAAAATGCCATTAGATCTAGTATTCAATGAGA
EY934341       <-- ......................................TATTCAATGAGA
FD961375       <-- ..................................................
FD935072       <-- ..................................................
EX766129       --> TTT-CTTCGGTGGAATGGGAAAATGCCATTAGATCTAGTATTCAATGAGA
EY916718       --> TTT-CTTCGGTGGAATGGGAAAATGCCATTAGATCTAGTATTCAATGAGA
EY938145       --> ..................................................
FD532556       --> TTT-CTTCGGTGGAATGGGAAAATGCCATTAGATCTAGTATTCAATGAGA
FD533790       --> TTT-CTTCGGTGGAATGGGAAAATGCCATTAGATCTAGTATTCAATGAGA
FD550152       --> TTT-CTTCGGTGGAATGGGAAAATGCCATTAGATCTAGTATTCAATGAGA
FD576390       --> TTT-CTTCGGTGGAATGGGAAAATGCCATTAGATCTAGTATTCAATGAGA
FD954967       --> TTT-CTTCGGTGGAATGGGAAAATGCCGTTAGATCTAGTATTCAATGAGA
FD965703       --> ..................................................
EV536062       --> TTT-CTTCGGTGGAATGGGAAAATGCCATTAGATCTAGTATTCAATGAGA
EV565930       --> TTT-CTTCGGTGGAATGGGAAAATGCCATTAGATCTAGTATTCAATGAGA
EV570353       --> TTT-CTTCGGTGGAATGGGAAAATGCCATTAGATCTATTATTCAATGAGA
FD955083       --> TTT-CTTCGGTGGAATGGGAAAATGCCATTAGATCTAGTATTCAATGAGA
FD971676       --> ..................................................
FD988267       --> TTT-CTTCGGTGGAATGGGAAAATGCCATTAGATCTAGTATTCAATGAGA
EX903033       --> TTT-CTTCGGTGGAATGGGAAAATGCCATTAGATCTAGTATTCAATGAGA
FD962790       --> TTTTCTTCGGTGGAATGGGAAAATGCCA......................
FD551329       --> TTT-CTTCGGTGGAATGGGAAAATGCCATTAGATCTAGTATTCAATGAGA
EY940152       --> TTT-CTTCGGTGGAATGGGAAAATGCCATTAGATCTAGTATTCAATGAGA
EX755251       --> TTT-CTTCGGTGGAATGGCAAAATGCCATTAGATCTAGTATTCAATGAGA
EV538703       --> TTT-CTTCGGTGGAATGGGAAAATGCCATTAGATCTAGTATTCAATGAGA
EY945738       --> TTT-CTTCGGTGGAATGGGAAAATGCCATTAGATCTAGTATTCAATGAGA
FD532801       --> TTT-CTTCGGTGGAATGGGAAAATGCCATTAGATCTAGTATTCAATGAGA
FD954897       --> TTT-CTTCGGTGGAATGGGAAAATGCCATTAGATCCAGTATTCAATGAGA
EV538888       --> TTT-CTTCGGTGGAATGGGAAAATGCCATTAGATCTAGTATTCAATGAGA
FD938790       --> TTT-CTTCGGTGGAATGGGAAAATGCCATTAGATCTAGTATTCAATGAGA
FD580743       --> TTT-CTTCGGTGGAATGGGAAAATGCCATTAGATCTAGTATTCAATGAGA
FD949001       --> TTT-CTTCGGTGGAATGGGAAAATGCCATTAGATCTAGTATTCAATGAGA
FD980308       --> TTT-CTTCGGTGGAATGGGAAAATGCCATTAGATCTAGTATTCAATGAGA

               596    -    646
UN22948        --> ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767780       <-- ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG
EY935955       <-- ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG
EV540594       <-- ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG
EV542803       <-- ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG
FD546128       <-- ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG
EX769815       <-- ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG
FD959263       <-- ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG
EY941956       <-- ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG
FD976211       <-- ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG
EY912354       <-- ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG
FD552539       <-- ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG
FD580889       <-- ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG
FD984183       <-- ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG
EY935130       <-- ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG
FD529166       <-- ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG
FD528987       <-- ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG
FD547229       <-- ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG
EV571168       <-- ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG
EY934341       <-- ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG
FD961375       <-- ..................................................
FD935072       <-- ..................................................
EX766129       --> ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG
EY916718       --> ACCGAAAAGATCTCATCACATTATTTAG-ATTCCGAGAGAGGATGTAATG
EY938145       --> ..................................................
FD532556       --> ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG
FD533790       --> ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG
FD550152       --> ACCGAAAAGATCTCATCACATTATTTAG-ATTCCGAGAGAGGATGTAATG
FD576390       --> ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG
FD954967       --> ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGGGAGGATGTAATG
FD965703       --> ..................................................
EV536062       --> ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG
EV565930       --> ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG
EV570353       --> ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG
FD955083       --> ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG
FD971676       --> ..................................................
FD988267       --> ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG
EX903033       --> ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG
FD962790       --> ..................................................
FD551329       --> ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG
EY940152       --> ACCGAAAAGATCTCATCACATTATTTAG-ATTCCGAGAGAG-ATGTAATG
EX755251       --> ACCGAAAAGATCTCATTACATTATTTAGGATTCCGAGAGAGGATGTAATG
EV538703       --> ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG
EY945738       --> ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG
FD532801       --> ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG
FD954897       --> ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG
EV538888       --> ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG
FD938790       --> ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG
FD580743       --> ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG
FD949001       --> ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG
FD980308       --> ACCGAAAAGATCTCATCACATTATTTAGGATTCCGAGAGAGGATGTAATG

               646    -    696
UN22948        --> AACATGGAATTGTTTATGGG-TCAGTTGCAAATAAAGCCATGGTACATAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767780       <-- AACATGGAATTGTTTATGGG-TCAGTTGCAAATAAAGCCATGGTACATAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935955       <-- AACATGGAAGTGTTTATGGG-TCAGTTGCAAATAGAGCCATGGTACATAG  Raphanus sativus cv Early Scarlet Globe
EV540594       <-- AACATGGAATTGTTTATGGG-TCAGTTGCAAATAAAGCCGTGGTACATAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542803       <-- AACATGGAATTGTTTATGGG-TCAGTTGCAAATAAAGCCATGGTACATAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD546128       <-- AACATGGAAGTGTTTATGGG-TCAGTTGCAAATAGAGCCATGGTACATAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX769815       <-- AACATGGAATTGTTTATGGG-TCAGTTGCAAATAAAGCCATGGTACATAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD959263       <-- AACATGGAATTGTTTATGGG-TCAGTTGCAAATAAAGCCATGGTACATAG  Raphanus raphanistrum subsp. maritimus
EY941956       <-- AACATGGAATTGTTTATGGG-TCAGTTGCAAATAAAGCCATGGTACATAG  Raphanus sativus cv Rat-Tail Radish #3870
FD976211       <-- AACATGGAAGTGTTTATGGG-TCAGTTGCAAATAGAGCCATGGTACATAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912354       <-- AACATGGAAGTGTTTATGGG-TCAGTTGCAAATAGAGCCATGGTACATAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552539       <-- AACATGGAATTGTTTATGGG-TCAGTTGCAAATAAAGCCATGGTACATAG  Raphanus raphanistrum subsp. landra
FD580889       <-- AACATGGAATTGTTTATGGG-TCAGTTGCAAATAAAGCCATGGTACATAG  Raphanus sativus cv Rat-Tail Radish #3870
FD984183       <-- AACATGGAATTGTTTATGGG-TCAGTTGCAAATAAAGCCATGGTACATAG  Raphanus raphanistrum subsp. landra
EY935130       <-- AACATGGAAGTGTTTATGGG-TCAGTTGCAAATAGAGCCATGGTACATAG  Raphanus sativus cv Early Scarlet Globe
FD529166       <-- AACATGGAATTGTTTATGTG-TCAGTTGCAAATAAAGCCATGGTACATAG  Raphanus raphanistrum subsp. maritimus
FD528987       <-- AACATGGAATTGTTTATGGG-TCAGTTGCAAATAAAGCCATGGT--ATAG  Raphanus raphanistrum subsp. maritimus
FD547229       <-- AACATGGAATTGTTTATGGG-TCAGTTGCAAATAAAGCCATGGTACATAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571168       <-- AACATGGAATTGTTTATGGG-TCAGTTGCAAATAAAGCCATGGTACATAG  Raphanus raphanistrum subsp. landra
EY934341       <-- AACATGGAAGTGTTTATGGG-TCAGTTGCAAATAGAGCCATGGTACATAG  Raphanus sativus cv Early Scarlet Globe
FD961375       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD935072       <-- ..................................................  Raphanus sativus var. oleiformis
EX766129       --> AACATGGAATTGTTTATGGG-TCAGT........................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916718       --> AACATGGAAGTGTTTATGGG-TCAGTT.......................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938145       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD532556       --> AACATGGAATTGTTTATGGG-TCAGTTGCAAATAAAGCCATGGTA--TAG  Raphanus raphanistrum subsp. maritimus
FD533790       --> AACATGGAATTGTTTATGGG-TCAGTTGCAAATAAAGCCATGGTACATAG  Raphanus raphanistrum subsp. maritimus
FD550152       --> AACATGGAAGTGTTTATGGG-TCAGTTGCAAATAGAGCCATGGTACATAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD576390       --> AACATGGAATTGTTTATGGG-TCAGTTGCAAATAAAGCCATGGTACATAG  Raphanus sativus cv Rat-Tail Radish #3870
FD954967       --> AACATGGAATTGTT-ATGGG-TCAGTTGCAAATAAAGCCATGGTACATAG  Raphanus sativus cv Rat-Tail Radish #3870
FD965703       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV536062       --> AACATGGAATTGTTTATGGG-TCAGTTGCAAATAAAGCCGTGGTACATAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV565930       --> AACATGGAATTGTTTATGGG-TCAGTTGCAAATAAAGCCATGGTACATAG  Raphanus raphanistrum subsp. landra
EV570353       --> AACATGGAATTGTTTATGGG-TCAGTTGCAAATAAAGCCATGGTACATAG  Raphanus raphanistrum subsp. landra
FD955083       --> AACATGGAATTGTTTATGGG-TCAGTTGCAAATAAAGCCATGGTACATAG  Raphanus sativus cv Rat-Tail Radish #3870
FD971676       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD988267       --> AACATGGAATTGTTTATGGG-TCAGTTGCAAATAAAGCCATGGTACATAG  Raphanus raphanistrum subsp. landra
EX903033       --> AACATGGAATTGTTTATGGG-TCAGTTGCAAATAAAGCCATGGTACATAG  Raphanus sativus cv Rat-Tail Radish #3870
FD962790       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD551329       --> AACATGGAATTGTTTATGGG-TCAGTTGCAAATAAAGCCATGGTACATAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940152       --> AACATGGAAGTGTTTATGGG-TCAGTTGCAAATAGAGCCATGGTACATAG  Raphanus sativus cv Early Scarlet Globe
EX755251       --> AACATGGAATTGTTTATGGG-TCAGTTGCAAATAAAGCCATGGTACATAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538703       --> AACATGGAATTGTTTATGGGGTCAGTTGCAAATAAAGCCATGGTACATAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945738       --> AACATGGAATTGTTTATGGGGTCAGTTGCAAATAAAGCCATGGTACATAG  Raphanus sativus cv Rat-Tail Radish #3870
FD532801       --> AACATGGAATTGTTTATGTG-TCAGTTGCAAATAAAGCCATGGTACATAG  Raphanus raphanistrum subsp. maritimus
FD954897       --> AACATGGAATTGTTTATGGG-TCAGTTGCAAATAAAGCCATGGTACATAG  Raphanus sativus cv Rat-Tail Radish #3870
EV538888       --> AACATGGAATTGTTTATGGG-TCAGTTGCAAATAAAGCCATGGTACATAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD938790       --> AATATGGAATTGTTTATGGG-TCAGTTGCAAATAAAGCCATGGTACATAG  Raphanus sativus var. oleiformis
FD580743       --> AACATGGAATTGTTTATGGG-TCAGTTGCAAATAAAGCCATGGTACATAG  Raphanus sativus cv Rat-Tail Radish #3870
FD949001       --> AACATGGAAGTGTTTATGGG-TCAGTTGCAAATAGAGCCATGGTACATAG  Raphanus sativus cv Early Scarlet Globe
FD980308       --> AACATGGAAGTGTTTATGGG-TCAGTTGCAAATAGAGCCATGGTACATAG  Raphanus raphanistrum subsp. raphanistrum (NY)

               696    -    746
UN22948        --> ATAGTGATAAATATTGCACGGCTAGGGTACCAAAAAAA-TCCAAAAGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767780       <-- ATAGTGATAAATATTGCACGGCTAGGGTACCAAAAAAA-TCCAAAAGAAT
EY935955       <-- ATAGTGATAAATATTGCACGGCTAGGGTACCAAAAAA--TCCAAAAGAAT
EV540594       <-- ATAGTGATAAATATTGCACGGCTAGGGTACCAAAAAA--TCCAAAAGAAT
EV542803       <-- ATAGTGATAAATATTGCACGGCTAGGGTACCAAAAAAAATCCAAAAGAAT
FD546128       <-- ATAGTGATAAATATTGCACGGCTAGGGTACCAAAAAAA-TCCAAAAGAAT
EX769815       <-- ATAGTGATAAATATTGCACGGCTAGGGTACCAAAAAA--TCCAAAAGAAT
FD959263       <-- ATAGTGATAAATATTGCACGGCTAGGGTACCAAAAAA--TCCAAAAGAAT
EY941956       <-- ATAGTGATAAATATTGCACGGCTAGGGTACCAAAAAAA-TCCAAAAGAAT
FD976211       <-- ATAGTGATAAATATTGCACGGCTAGGGTACCAAAAAA--TCCAAAAGAAT
EY912354       <-- ATAGTGATAAATATTGCACGGCTAGGGTACCAAAAAAA-TCCAAAAGAAT
FD552539       <-- ATAGTGATAAATATTGCACGGCTAGGGTACCAAAAAAA-TCCAAAAGAAT
FD580889       <-- ATAGTGATAAATATTGCACGGCTAGGGTACCAAAAAA--TCCAAAAGAAT
FD984183       <-- ATAGTGATAAATATTGCACGGCTAGGGTACCAAAAAAA-TCCAAAAGAAT
EY935130       <-- ATAGTGATAAATATTGCACGGCTAGGGTACCAAAAAAA-TCCAAAAGAAT
FD529166       <-- ATAGTGATAAATATTGCACGGCTAGGGTACCAAAAAAA-TCCAAAAGAAT
FD528987       <-- ATAGTGATAAATATTGCACGGCTAGGGTACCAAAAAA--TCCAAAAGAAT
FD547229       <-- ATAGTGATAAATATTGCACGGCTAGGGTACCAAAAAAA-TCCAAAAGAAT
EV571168       <-- ATAGTGATAAATATTGCACGGCTAGGGTACCAAAAAA--TCCAAAAGAAT
EY934341       <-- ATAGTGATAAATATTGCACGGCTAGGGTACCAAAAAAA-TCCAAAAGAAT
FD961375       <-- ..................................................
FD935072       <-- ..................................................
EX766129       --> ..................................................
EY916718       --> ..................................................
EY938145       --> ..................................................
FD532556       --> ATAGTGATAAATATTGCACGGCTAGGGTACC...................
FD533790       --> ATAGTGA...........................................
FD550152       --> ATAGTGATAAATATTGCACGGCTAGGGTACCA..................
FD576390       --> ATAGTGATAAATATTGCACGGCTAGGGTACCAAAAA---TCCAAA-GA-T
FD954967       --> ATAGTGATAAATATTGCACGGCTAGGGTA.....................
FD965703       --> ..................................................
EV536062       --> ATAGTGATAAATATTGCACGGCTAGGGTACC...................
EV565930       --> ATAGTGATAAATATTGCACGGCTAGGGTACC...................
EV570353       --> ATAGTGATAAATATTGCACGGCTAGGGTACC...................
FD955083       --> ATAGTGATAAATATTGCACGGCTAGGGTACCAAAAA..............
FD971676       --> ..................................................
FD988267       --> ATAGTGATAAATATTG..................................
EX903033       --> ATAGTGATAA-TATTG..................................
FD962790       --> ..................................................
FD551329       --> ATAGTGATAAATATTGCACGGCTAGGGTACCAAAAAA.............
EY940152       --> ATAGTGATAA-TATTGCACGGCTAGG-TACCAAAAA..............
EX755251       --> ATAGTGATAAATATTGCACGGCTAGGGTACCAAAAAA.............
EV538703       --> A-AGTGATAAATATTGCACGGCTAGGGTACCAAAAAA--TCCAAAAGAAT
EY945738       --> ATAGTGATAAATATTGCACGGCTAGGGTACCAAAAAA.............
FD532801       --> ATAGTGATAAATATTGCACGGCTAGGGTACCAAAAAAA-TCCAAAAGAAT
FD954897       --> ATAGTGATAAATATTGCACGGCTAGGGTACCAAAAAA--TCCAAAAGAAT
EV538888       --> ATAGTGATAAATATTGCACGGCTAGGGTACC...................
FD938790       --> ATAGTGATAAATATTGCACGGCTAGGGTACCAAAAAA--TCCAAAAGAAT
FD580743       --> ATAGTGATAAATATTGCACGGCTAGGGTACCAAAAAA--TCCAAAAGAAT
FD949001       --> ATAGTGATAAATATTGCACGGCTAGGGTACCAAAAAAA-TCCGAAAGAAT
FD980308       --> ATAGTGATAAATATTGCACGGCTAGGGTACCAAAAAA--TCCAAAAGAAT

               746    -    796
UN22948        --> ACCGAAAATGTTCAGGCGGAAAAGGACTAATTGCGTCGAAATTGAAGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767780       <-- ACCGAAAATGTTCAGGCGGAAAAGGACTAATTGCGTCGAAATTGAAGTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935955       <-- ACCGAAAGTGTTCAGGCGGAAAAGGACTAATTGCGTCGAAATTGAAGTTG  Raphanus sativus cv Early Scarlet Globe
EV540594       <-- ACCGAAAATGTTCAGGCGGAAAAGGACTAATTGCGTCGAAATTGAAGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542803       <-- ACCGAAAATGTTCAGGCGGAAAAGGACTAATTGCGTCGAAATTGAAGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD546128       <-- ACCGAAAGTGTTCAGGCGGAAAAGGACTAATTGCGTCGAAATT-AAGTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX769815       <-- ACCGAAAATGTTCAGGCGGAAAAGGACTAATTGCGTCGAAATTGAAGTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD959263       <-- ACCGAAAATGTTCAGGCGGAAAAGGACTAATTGCGTCGAAATTGAAGTTG  Raphanus raphanistrum subsp. maritimus
EY941956       <-- ACCGAAAATGTTCAGGCGGAAAAGGACTAATTGCGTCGAAATTGAAGTTG  Raphanus sativus cv Rat-Tail Radish #3870
FD976211       <-- ACCGAAAGTGTTCAGGCGGAAAAGGACTAATTGCGTCGAAATTGAAGTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912354       <-- ACCGAAAGTGTTCAGGCGGAAAAGGACTAATTGCGTCGAAATTGAAGTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552539       <-- ACCGAAAATGTTCAGGCGGAAAAGGACTAATTGCGTCGAAATTGAAGTTG  Raphanus raphanistrum subsp. landra
FD580889       <-- ACCGAAAATGTTCAGGCGGAAAAGGACTAATTGCGTCGAAATTGAAGTTG  Raphanus sativus cv Rat-Tail Radish #3870
FD984183       <-- ACCGAAAATGTTCAGGCGGAAAAGGACTAATTGCGTCGAAATTGAAGTTG  Raphanus raphanistrum subsp. landra
EY935130       <-- ACCGAAAGTGTTCAGGCGGAAAAGGACTAATTGCGTCGAAATTGAAGTTG  Raphanus sativus cv Early Scarlet Globe
FD529166       <-- ACCGAAAATGTTCAGGCGGAAAAGGACTAATTGCGTCGAAATTGAAGTTG  Raphanus raphanistrum subsp. maritimus
FD528987       <-- ACCGAAAATGTTCAGGCGGAAAAGGACTAATTGCGTCGAAATTGAAGTTG  Raphanus raphanistrum subsp. maritimus
FD547229       <-- ACCGAAAATGTTCAGGCGGAAAAGGACTAATTGCGTCGAAATTGAAGTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571168       <-- ACCGAAAATGTTCAGGCGGAAAAGGACTAATTGCGTCGAAATTGAAGTTG  Raphanus raphanistrum subsp. landra
EY934341       <-- ACCGAAAGTGTTCAGGCGGAAAAGGACTAATTGCGTCGAAATTGAAGTTG  Raphanus sativus cv Early Scarlet Globe
FD961375       <-- ......AATGTTCAGGCGGAAAAGGACTAATTGCGTCGAAATTGAAGTTG  Raphanus raphanistrum subsp. maritimus
FD935072       <-- ..................................................  Raphanus sativus var. oleiformis
EX766129       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916718       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938145       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD532556       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD533790       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD550152       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD576390       --> ACCGAAA-TGTTCAG-CGGAAAAG-ACTA-TTGCGTCGAA-TTGAAGTTG  Raphanus sativus cv Rat-Tail Radish #3870
FD954967       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD965703       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV536062       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV565930       --> ..................................................  Raphanus raphanistrum subsp. landra
EV570353       --> ..................................................  Raphanus raphanistrum subsp. landra
FD955083       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD971676       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD988267       --> ..................................................  Raphanus raphanistrum subsp. landra
EX903033       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD962790       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD551329       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940152       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX755251       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538703       --> ACCGAAAATGTTCAGGCGGAAAAGGACTAATTGCGTCGAAATTGAAGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945738       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD532801       --> ACCGAAAATGTTCAGGCGGAAAAGGACTAATTGCGTCGAAATTGAAGTTG  Raphanus raphanistrum subsp. maritimus
FD954897       --> ACCGAAAATGTTCAGGCGGAAA-GGACTAATTGCGTCGAAATTGAAGTTG  Raphanus sativus cv Rat-Tail Radish #3870
EV538888       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD938790       --> ACCGAAAATGTTCAGGCGGAAAAGGACTAATTGCGTCGAAATTGAAGTTG  Raphanus sativus var. oleiformis
FD580743       --> ACCGAAAATGTTCAGGCGGAAAAGGACTAATTGCGTCGAAATTGAAGTTG  Raphanus sativus cv Rat-Tail Radish #3870
FD949001       --> ACCGAAAGTGTTCAGGCGGAAAAGGACTAATTGCGTCGAAATTGAAGTTG  Raphanus sativus cv Early Scarlet Globe
FD980308       --> ACCGAAAGTGTTCAGGCGGAAAAGGACTAATTGCGTCGAAATTGAAGTTG  Raphanus raphanistrum subsp. raphanistrum (NY)

               796    -    846
UN22948        --> G-ACCTGGTTTATAGGCCCATGG-AACCTCTTGATAAGCCGCCGTTTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767780       <-- G-ACCTGGTTTATAGGCCCATGG-AACCTCTTGATAAGCCGCCGTTTTCT
EY935955       <-- G-ACCTGGTTTATAGGCCCATGG-AACCTCTTGATAAGCCGCCGTTTTCT
EV540594       <-- G-ACCTGGTTTATAGGCCCATGG-AACCTCTTGATAAGCCGCCGTTTTCT
EV542803       <-- G-ACCTGGTTTATAGGCCCATGG-AACCTCTTGATAAGCCGCCGTTTTCT
FD546128       <-- G-ACCTGGTTTATAGGCCCATGG-AACCTCTTGATAAGCCGCCGTTTTCT
EX769815       <-- G-ACCTGGTTTATAGGCCCATGG-AACCTCTTGATAAGCCGCCGTTTTCT
FD959263       <-- G-ACCTGGTTTATAGGCCCATGG-AACCTCTTGATAAGCCGCCGTTTTCT
EY941956       <-- G-ACCTGGTTTATAGGCCCATGG-AACCTCTTGATAAGCCGCCGTTTTCT
FD976211       <-- G-ACCTGGTTTATAGGCCCATGG-AACCTCTTGATAAGCCGCCGTTTTCT
EY912354       <-- G-ACCTGGTTTATAGGCCCATGG-AACCTCTTGATAAGCCGCCGTTTTCT
FD552539       <-- G-ACCTGGTTTATAGGCCCATGG-AACCTCTTGATAAGCCGCCGTTTTCT
FD580889       <-- G-ACCTGGTTTATAGGCCCATGG-AACCTCTTGATAAGCCGCCGTTTTCT
FD984183       <-- G-ACCTGGTTTATAGGCCCATGG-AACCTCTTGATAAGCCGCCGTTTTCT
EY935130       <-- G-ACCTGGTTTATAGGCCCATGG-AACCTCTTGATAAGCCGCCGTTTTCT
FD529166       <-- G-ACCTGGTTTATAGGCCCATGG-AACCTCTTGATAAGCCGCCGTTTTCT
FD528987       <-- G-ACCTGGTTTATAGGCCCATGG-AACCTCTTGATAAGCCGCCGTTTTCT
FD547229       <-- G-ACCTGGTTTATAGGCCCATGG-AACCTCTTGATAAGCCGCCGTTTTCT
EV571168       <-- G-ACCTGGTTTATAGGCCCATGG-AACCTCTTGATAAGCCGCCGTTTTCT
EY934341       <-- G-ACCTGGTTTATAGGCCCATGG-AACCTCTTGATAAGCCGCCGTTTTCT
FD961375       <-- G-ACCTGGTTTATAGGCCCATGG-AACCTCTTGATAAGCCGCCGTTTTCT
FD935072       <-- ..............................TTGATAAGCCGCCGTTTTCT
EX766129       --> ..................................................
EY916718       --> ..................................................
EY938145       --> ..................................................
FD532556       --> ..................................................
FD533790       --> ..................................................
FD550152       --> ..................................................
FD576390       --> G-AC-TGGTT-ATAG--CCATGG-AAC-TCT-GATAAGCCGCCGTTTctg
FD954967       --> ..................................................
FD965703       --> ..................................................
EV536062       --> ..................................................
EV565930       --> ..................................................
EV570353       --> ..................................................
FD955083       --> ..................................................
FD971676       --> ..................................................
FD988267       --> ..................................................
EX903033       --> ..................................................
FD962790       --> ..................................................
FD551329       --> ..................................................
EY940152       --> ..................................................
EX755251       --> ..................................................
EV538703       --> GGACCTGGTTTATAGGCCCATGGGAACCTCTTGATAAGCCGCCGTTTTCT
EY945738       --> ..................................................
FD532801       --> G-ACCTGGTTTATAG-CCCATGG-AACCTCTTGATAA.............
FD954897       --> G-ACCTGGTTTATAGGCCCATGG-AACCTCTTGATAAGCCGCCGTTTTCT
EV538888       --> ..................................................
FD938790       --> --ACCTGGTTTATAG-CCCATGG-AACCTCTTGATAAGCCGCCGTTTTCT
FD580743       --> G-ACCTGGTTTATAG-CCCATGG-AACCTCTTGATAAGCCGCCGTTTTCT
FD949001       --> G-ACCTGGTTTATAGGCCCATGG-AACCTCTTGATAAGCCGCCGTTTTCT
FD980308       --> G-ACCTGGTTTATAGGCCCATGG-AACCTCTTGATAAGCCGCCGTTTTCT

               846    -    896
UN22948        --> TGGTACATCCGTCGGGTCATCATCAAAAGCACTAAAAGGTTAGTGGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767780       <-- TGGTACATCCGTCGGGTCATCATCAAAAGCACTAAAAGGTTAGTGGAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935955       <-- TGGTACATCCGTCGGGTCATCATCAAAAGCACTAAGAGGTTAATGGAAGA  Raphanus sativus cv Early Scarlet Globe
EV540594       <-- TGGTACATCCGTCGGGTCATCATCAAAAGCACTAAAAGGTTAGTGGAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542803       <-- TGGTACATCCGTCGGGTCATCATCAAAAGCACTAAAAGGTTAGTGGAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD546128       <-- TGGTACATCCGTCGGGTCATCATCAAAAGCACTAAGAGGTTAATGGAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX769815       <-- TGGTACATCCGTCGGGTCATCATCAAAAGCACTAAAAGGTTAGTGGAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD959263       <-- TGGTACATCCGTCGGGTCATCATCAAAAGCACTAAAAGGTTAGTGGAAGA  Raphanus raphanistrum subsp. maritimus
EY941956       <-- TGGTACATCCGTCGGGTCATCATCAAAAGCACTAAAAGGTTAGTGGAAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD976211       <-- TGGTACATCCGTCGGGTCATCATCAAAAGCACTAAGAGGTTAATGGAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912354       <-- TGGTACATCCGCCGGGTCATCATCAAAAGCACTAAGAGGTTAATGGAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552539       <-- TGGTACATCCGTCGGGTCATCATCAAAAGCACTAAAAGGTTAGTGGAAGA  Raphanus raphanistrum subsp. landra
FD580889       <-- TGGTACATCCGTCGGGTCATCATCAAAAGCACTAAAAGGTTAGTGGAAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD984183       <-- TGGTACATCCGTCGGGTCATCATCAAAAGCACTAAAAGGTTAGTGGAAGA  Raphanus raphanistrum subsp. landra
EY935130       <-- TGGTACATCCGTCGGGTCATCATCAAAAGCACTAAGAGGTTAATGGAAGA  Raphanus sativus cv Early Scarlet Globe
FD529166       <-- TGGTACATCCGTCGGGTCATCATCAAAAGCACTAAAAGGTTAGTGGAAGA  Raphanus raphanistrum subsp. maritimus
FD528987       <-- TGGTACATCCGTCGGGTCATCATCAAAAGCACTAAAAGGTTAGTGGAAGA  Raphanus raphanistrum subsp. maritimus
FD547229       <-- TGGTACATCCGTCGGGTCATCATCAAAAGCACTAAAAGGTTAGTGGAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571168       <-- TGGTACATCCGTCGGGTCATCATCAAAAGCACTAAAAGGTTAGTGGAAGA  Raphanus raphanistrum subsp. landra
EY934341       <-- TGGTACATCCGTCGGGTCATCATCAAAAGCACTAAGAGGTTAATGGAAGA  Raphanus sativus cv Early Scarlet Globe
FD961375       <-- TGGTACATCCGTCGGGTCATCATCAAAAGCACTAAAAGGTTAGTGGAAGA  Raphanus raphanistrum subsp. maritimus
FD935072       <-- TGGTACATCCGTCGGGTCATCATCAAAAGCACTAAAAGGTTAGTGGAAGA  Raphanus sativus var. oleiformis
EX766129       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916718       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938145       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD532556       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD533790       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD550152       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD576390       --> gta...............................................  Raphanus sativus cv Rat-Tail Radish #3870
FD954967       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD965703       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV536062       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV565930       --> ..................................................  Raphanus raphanistrum subsp. landra
EV570353       --> ..................................................  Raphanus raphanistrum subsp. landra
FD955083       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD971676       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD988267       --> ..................................................  Raphanus raphanistrum subsp. landra
EX903033       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD962790       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD551329       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940152       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX755251       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538703       --> TGGTACATCCGTCGGGTCATCATCAAA-GCACTAAAAGtta.........  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945738       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD532801       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD954897       --> TGGTACATCCGTCGGGTCATCATCAAAAGCACTAAAATGTTAGTGGAAGA  Raphanus sativus cv Rat-Tail Radish #3870
EV538888       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD938790       --> TGGTACATCCGTCGGGTCA...............................  Raphanus sativus var. oleiformis
FD580743       --> TG................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD949001       --> TGGTACATCCGTCGGGTCATCATCAAAAGCACTAAGA-GTTAATGGAAGA  Raphanus sativus cv Early Scarlet Globe
FD980308       --> TGGTACATCCGTCGGGTCATCATCAAAAGCACTAAGAGGTTAATGGAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)

               896    -    946
UN22948        --> TCTTCAGATTCGAGGCGCCGTTCTCCGAAGTGTTTGAGACTCTTCACTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767780       <-- TCTTCAGATTCGAGGCGCCGTTCTCCGAAGTGTTTGAGACTCTTCACTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935955       <-- TCTTCAGATTCGAGGCGCCGTTCTCCGAAGTATATGAGACTCTTCACTTC  Raphanus sativus cv Early Scarlet Globe
EV540594       <-- TCTTCAGATTCGAGGCGCCGTTTTCCGAAGTGTTTGAGACTCTTCACTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542803       <-- TCTTCAGATTCGAGGCGCCGTTCTCCGAAGTGTTTGAGACTCTTCACTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD546128       <-- TCTTCAGATTCGAGGCGCCGTTCTCCGAAGTATATGAGACTCTTCACTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX769815       <-- TCTTCAGATTCGAGGCGCCGTTCTCCGAAGTGTTTGAGACTCTTCACTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD959263       <-- TCTTCAGATTCGAGGCGCCGTTCTCCGAAGTGTTTGAGACTCTTCACTTC  Raphanus raphanistrum subsp. maritimus
EY941956       <-- TCTTCAGATTCGAGGCGCCGTTTTCCGAAGTGTTTGAGACTCTTCACTTC  Raphanus sativus cv Rat-Tail Radish #3870
FD976211       <-- TCTTCAGATTCGAGGCGCCGTTCTCCGAAGTATATGAGACTCTTCACTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912354       <-- TCTTCAGATTCGAGGCGCCGTTTTCCGAAGTATATGAGACTCTTCACTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552539       <-- TCTTCAGATTCGAGGCGCCGTTTTCCGAAGTGTTTGAGACTCTTCACTTC  Raphanus raphanistrum subsp. landra
FD580889       <-- TCTTCAGATTCGAGGCGCCGTTTTCCGAAGTGTTTGAGACTCTTCACTTC  Raphanus sativus cv Rat-Tail Radish #3870
FD984183       <-- TCTTCAGATTCGAGGCGCCGTTCTCCGAAGTGTTTGAGACTCTTCACTTC  Raphanus raphanistrum subsp. landra
EY935130       <-- TCTTCAGATTCGAGGCGCCGTTCTCCGAAGTATATGAGACTCTTCACTTC  Raphanus sativus cv Early Scarlet Globe
FD529166       <-- TCTTCAGATTCGAGGCGCCGTTTTCCGAAGTGTTTGAGACTCTTCACTTC  Raphanus raphanistrum subsp. maritimus
FD528987       <-- TCTTCAGATTCGAGGCGCCGTTCTCCGAAGTGTTTGAGACTCTTCACTTC  Raphanus raphanistrum subsp. maritimus
FD547229       <-- TCTTCAGATTCGAGGCGCCGTTTTCCGAAGTGTTTGAGACTCTTCACTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571168       <-- TCTTCAGATTCGAGGCGCCGTTTTCCGAAGTGTTTGAGACTCTTCACTTC  Raphanus raphanistrum subsp. landra
EY934341       <-- TCTTCAGATTCGAGGCGCCGTTTTCCGAAGTATATGAGACTCTTCACTTC  Raphanus sativus cv Early Scarlet Globe
FD961375       <-- TCTTCAGATTCGAGGCGCCGTTCTCCTAAGTGTTTGAGACTCTTCACTTC  Raphanus raphanistrum subsp. maritimus
FD935072       <-- TCTTCAGATTCGAGGCGCCGTTCTCCGAAGTGTTTGAGACTCTTCACTTC  Raphanus sativus var. oleiformis
EX766129       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916718       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938145       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD532556       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD533790       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD550152       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD576390       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD954967       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD965703       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV536062       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV565930       --> ..................................................  Raphanus raphanistrum subsp. landra
EV570353       --> ..................................................  Raphanus raphanistrum subsp. landra
FD955083       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD971676       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD988267       --> ..................................................  Raphanus raphanistrum subsp. landra
EX903033       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD962790       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD551329       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940152       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX755251       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538703       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945738       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD532801       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD954897       --> TCTTCAGATTCGAGGCGCCGTTCTCC........................  Raphanus sativus cv Rat-Tail Radish #3870
EV538888       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD938790       --> ..................................................  Raphanus sativus var. oleiformis
FD580743       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD949001       --> TCTTCAGATTCGAG-CGCCGTTCTCCGAAGTATATGAGACTCTTCACTTC  Raphanus sativus cv Early Scarlet Globe
FD980308       --> TCTTCAGATTCGAGGCGCCGTTCTCCGAAGTATATGAGACTCTTCACTTC  Raphanus raphanistrum subsp. raphanistrum (NY)

               946    -    996
UN22948        --> CGGTCTTGGCACGTTATATCATGTTGCAAGAAAATAAATAAACGCAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767780       <-- CGGTCTTGGCACGTTATATCATGTTGCAAGAAAATAAATAAACGCAAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935955       <-- CGGTCTTGGCACGTTATATCATGATGCAAGAAAATAAATAAACGCAAACG  Raphanus sativus cv Early Scarlet Globe
EV540594       <-- CGGTCTTGGCGCATTATATCATGTTGCAAGAAAATAAATAAACGCAAACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542803       <-- CGGTCTTGGCGCATTATATCATGTTGCAAGAAAATAAATAAACGCAAACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD546128       <-- CGGTCTTGGCACGTTATATCATGATGCAAGAAAATAAATAAACGCAAACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX769815       <-- CGGTCTTGGCACGTTATATCATGTTGCAAGAAAATAAATAAACGCAAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD959263       <-- CGGTCTTGGCACGTTATATCATGTTGCAAGAAAATAAATAAACGCAAACA  Raphanus raphanistrum subsp. maritimus
EY941956       <-- CGGTCTTGGCACGTTATATCATGTTGCAAGAAAATAAATAAACGCAAACA  Raphanus sativus cv Rat-Tail Radish #3870
FD976211       <-- CGGTCTTGGCACGTTATATCATGATGCAAGAAAATAAATAAACGCAAACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912354       <-- CGGTCTTGGCACGTTATATCATGATGCAAGAAAATAAATAAACGCAAACG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552539       <-- CGGTCTTGGCACGTTATATCATGTTGCAAGAAAATAAATAAACGCAAACA  Raphanus raphanistrum subsp. landra
FD580889       <-- CGGTCTTGGCACGTTATATCATGTTGCAAGAAAATAAATAAACGCAAACA  Raphanus sativus cv Rat-Tail Radish #3870
FD984183       <-- CGGTCTTGGCACGTTATATCATGTTGCAAGAAAATAAATAAACGCAAACA  Raphanus raphanistrum subsp. landra
EY935130       <-- CGGTCTTGGCACGTTATATCATGATGCAAGAAAATAAATAAACGCAAACG  Raphanus sativus cv Early Scarlet Globe
FD529166       <-- CGGTCTTGGCACGTTATATCATGTTGCAAGAAAATAAATAAACGCAAACA  Raphanus raphanistrum subsp. maritimus
FD528987       <-- CGGTCTTGGCACGTTATATCATGTTGCAAGAAAATAAATAAACGCAAACA  Raphanus raphanistrum subsp. maritimus
FD547229       <-- CGGTCTTGGCACGTTATATCATGTTGCAAGAAAATAAATAAACGCAAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571168       <-- CGGTCTTGGCACGTTATATCATGTTGCAAGAAAATAAATAAACGCAAACA  Raphanus raphanistrum subsp. landra
EY934341       <-- CGGTCTTGGCACGTTATATCATGATGCAAGAAAATAAATAAACGCAAACG  Raphanus sativus cv Early Scarlet Globe
FD961375       <-- CGGTCTTGGCACGTTATATCATGTTGCAAGAAAATAAATAAACGCAAACA  Raphanus raphanistrum subsp. maritimus
FD935072       <-- CGGTCTTGGCACGTTATATCATGTTGCAAGAAAATAAATAAACGCAAACA  Raphanus sativus var. oleiformis
EX766129       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916718       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938145       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD532556       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD533790       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD550152       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD576390       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD954967       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD965703       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV536062       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV565930       --> ..................................................  Raphanus raphanistrum subsp. landra
EV570353       --> ..................................................  Raphanus raphanistrum subsp. landra
FD955083       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD971676       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD988267       --> ..................................................  Raphanus raphanistrum subsp. landra
EX903033       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD962790       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD551329       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940152       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX755251       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538703       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945738       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD532801       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD954897       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV538888       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD938790       --> ..................................................  Raphanus sativus var. oleiformis
FD580743       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD949001       --> CG-TCTTGGCACGTTATATCATGATGCAg.....................  Raphanus sativus cv Early Scarlet Globe
FD980308       --> CGGTCTTGGCACGTTATATCATGATGCAAGAAAATAAATAAACGCAAACG  Raphanus raphanistrum subsp. raphanistrum (NY)

               996    -   1046
UN22948        --> CTAAACATTA---TAACGGATCGCTTTATCTAGATACGAGCGTTGGAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767780       <-- CTAAACATTA---TAACGGATCGCTTTATCTAGATACGAGCGTTGGAGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935955       <-- CTAAACATTAGTATAACGGATCACTTTATCTAGATACGAGTGTTGGAGTA  Raphanus sativus cv Early Scarlet Globe
EV540594       <-- CTAAACATTAGTATAACTGATCACTTTATCTAGATACGAGCGTTGGAGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542803       <-- CTAAACATTAGTATAACTGATCACTTTATCTAGATACGAGCGTTGGAGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD546128       <-- CTAAACATTAGTATAACGGATCACTTTATCTAGATACGAGTGTTGGAGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX769815       <-- CTAAACATTA---TAACGGATCGCTTTATCTAGATACGAGCGTTGGAGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD959263       <-- CTAAACATTA---TAACGGATCGCTTTATCTAGATACGAGCGTTGGAGTA  Raphanus raphanistrum subsp. maritimus
EY941956       <-- CTAAACATTA---TAACGGATCGCTTTATCTAGATACGAGCGTTGGAGTA  Raphanus sativus cv Rat-Tail Radish #3870
FD976211       <-- CTAAACATTAGTATAACGGATCACTTTATCTAGATACGAGTGTTGGAGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912354       <-- CTAAACATTAGTATAACGGATCACTTTATCTAGATACGAGTGTTGGAGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552539       <-- CTAAACATTA---TAACGGATCGCTTTATCTAGATACGAGCGTTGGAGTA  Raphanus raphanistrum subsp. landra
FD580889       <-- CTAAACATTA---TAACGGATCGCTTTATCTAGATACGAGCGTTGGAGTA  Raphanus sativus cv Rat-Tail Radish #3870
FD984183       <-- CTAAACATTA---TAACGGATCGCTTTATCTAGATACGAGCGTTGGAGTA  Raphanus raphanistrum subsp. landra
EY935130       <-- CTAAACATTAGTATAACGGATCACTTTATCTAGATACGAGTGTTGGAGTA  Raphanus sativus cv Early Scarlet Globe
FD529166       <-- CTAAACATTA---TAACGGATCGCTTTATCTAGATACGAGCGTTGGAGTA  Raphanus raphanistrum subsp. maritimus
FD528987       <-- CTAAACATTA---TAACGGATCGCTTTATCTAGATACGAGCGTTGGAGTA  Raphanus raphanistrum subsp. maritimus
FD547229       <-- CTAAACATTA---TAACGGATCGCTTTATCTAGATACGAGCGTTGGAGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571168       <-- CTAAACATTA---TAACGGATCGCTTTATCTAGATACGAGCGTTGGAGTA  Raphanus raphanistrum subsp. landra
EY934341       <-- CTAAACATTAGTATAACGGATCACTTTATCTAGATACGAGTGTTGGAGTA  Raphanus sativus cv Early Scarlet Globe
FD961375       <-- CTAAACATTA---TAACGGATCGCTTTATCTAGATACGAGCGTTGGAGTA  Raphanus raphanistrum subsp. maritimus
FD935072       <-- CTAAACATTA---TAACGGATCGCTTTATCTAGATACGAGCGTTGGAGTA  Raphanus sativus var. oleiformis
EX766129       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916718       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938145       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD532556       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD533790       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD550152       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD576390       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD954967       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD965703       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV536062       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV565930       --> ..................................................  Raphanus raphanistrum subsp. landra
EV570353       --> ..................................................  Raphanus raphanistrum subsp. landra
FD955083       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD971676       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD988267       --> ..................................................  Raphanus raphanistrum subsp. landra
EX903033       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD962790       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD551329       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940152       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX755251       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538703       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945738       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD532801       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD954897       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV538888       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD938790       --> ..................................................  Raphanus sativus var. oleiformis
FD580743       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD949001       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD980308       --> CTAAACATTAGTATAACGGATCACTTTATCTAGATACGAGTGTTGGAGTA  Raphanus raphanistrum subsp. raphanistrum (NY)

               1046   -   1096
UN22948        --> CTAATTGTCAAAACCTTTATTTAATGAACAGCAACAATACAAAATAAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767780       <-- CTAATTGTCAAAACCTTTATTTAATGAACAGCAACAATACAAAATAAACC
EY935955       <-- CTAATTGTCAAAACCTTTATTTAATGAACAGCAACAATACAAAATAAACC
EV540594       <-- GTAATTGTCAAAACCTTTAGTTAATGAACAGCAACCACACAAAATAAACT
EV542803       <-- GTAATTGTCAAAACCTTTAGTCAATGAACAGCAACCACACAAAATAAACT
FD546128       <-- CTAATTGTCAAAACCTTTATTTAATGAACAGCAACAATACAAAATAAACC
EX769815       <-- CTAATTGTCAAAACCTTTATTTAATGAACAGCAACAATACAAAATAAACC
FD959263       <-- CTAATTGTCAAAACCTTTATTTAATGAACAGCAACAATACAAAATAAACC
EY941956       <-- CTAATTGTCAAAACCTTTATTTAATGAACAGCAACAATACAAAATAAACC
FD976211       <-- CTAATTGTCAAAACCTTTATTTAATGAACAGCAACAATACAAAATAAACC
EY912354       <-- CTAATTGTCAAAACCTTTATTTAATGAACAGCAACAATACAAAATAAACC
FD552539       <-- CTAATTGTCAAAACCTTTATTTAATGAACAGCAACAATAC..........
FD580889       <-- CTAATTGTCAAAACCTTTATTTAATGAACAGCAACAATACAAAATAAACC
FD984183       <-- CTAATTGTCAAAACCTTTATTTAATGAACAGCGACAATACAAAATAAACC
EY935130       <-- CTAATTGTCAAAACCTTTATTTAATGAACAGCAACAATACAAAATAAACC
FD529166       <-- CTAATTGTCAAAACCTTTATTTAATGAACAGCAACAATACAAAATAAACC
FD528987       <-- CTAATTGTCAAA-CCTTTATTTAATGAACAGCAACAATACAAAATAAACC
FD547229       <-- CTAATTGTCAAAACCTTTATTTAATGAACAGCAACAATACAAAATAAACC
EV571168       <-- CTAATTGTCAAAACCTTTATTTAATGAACAGCAACAATACAAAATAAACC
EY934341       <-- CTAATTGTCAAAACCTTTATTTAATGAACAGCAACAATACAAAATAAACC
FD961375       <-- CTAATTGTCAAAACCTTTATTTAATGAACAGCAACAATACAAAATAAACC
FD935072       <-- CTAATTGTCAAAACCTTTATTTAATGAACAGCAACAATGCAAAATAAACC
EX766129       --> ..................................................
EY916718       --> ..................................................
EY938145       --> ..................................................
FD532556       --> ..................................................
FD533790       --> ..................................................
FD550152       --> ..................................................
FD576390       --> ..................................................
FD954967       --> ..................................................
FD965703       --> ..................................................
EV536062       --> ..................................................
EV565930       --> ..................................................
EV570353       --> ..................................................
FD955083       --> ..................................................
FD971676       --> ..................................................
FD988267       --> ..................................................
EX903033       --> ..................................................
FD962790       --> ..................................................
FD551329       --> ..................................................
EY940152       --> ..................................................
EX755251       --> ..................................................
EV538703       --> ..................................................
EY945738       --> ..................................................
FD532801       --> ..................................................
FD954897       --> ..................................................
EV538888       --> ..................................................
FD938790       --> ..................................................
FD580743       --> ..................................................
FD949001       --> ..................................................
FD980308       --> CTAATTGTCAAAACCTTTATTTAATGAACAGCAACAATACAAAATAAACC

               1096   -   1146
UN22948        --> CAGTTGTGTACTTTATAGAAAACCTTAAACGTTGTTGTCTCCCCATATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767780       <-- CAGTTGTGTACTTTATAGAAAACCTTAAACGTTGTTGTCTCCCC......
EY935955       <-- CAGTTGTGTACTTTATAGAAAACCTTAAACG...................
EV540594       <-- CAGTTGTTTACTTTATAGAAAACCTTAAACGTTGTCGTCTCCCCATATTT
EV542803       <-- CAGTTGTTTACTTTATAGAAAACCTTAAACGTTGTTGTCTCCCCATATTT
FD546128       <-- CAGTTGTGTACTTT....................................
EX769815       <-- CAGTTGTGTACTTTATAG................................
FD959263       <-- CAGTTGTGCACTTTATAGAAAACCTTAAACGTTGTTGTCTCCCCATATTT
EY941956       <-- CAGTTGTGTACTTTATAG................................
FD976211       <-- CAGTTGTGTACTTTATAGAAAACCTTAAACGTTGTTGTCTCCCCATATTT
EY912354       <-- CAGTTGTGTACTTTATAGAAAACCc.........................
FD552539       <-- ..................................................
FD580889       <-- CAGTTGTGTACTTTATAGAAAACCTTAAACGTTGTTGTCTCCCCATATTT
FD984183       <-- CAGTTGTGTACTTTATAGAAAACCCTAAACGTTGTTGTCTCCCCATATTT
EY935130       <-- CAGTTGTGTACTTTAT..................................
FD529166       <-- CAGTTGTGCACTTTATAGAAAACCTTAAACGTTGTTGTCTCCCCATATTT
FD528987       <-- CAGTTGTGTACTTTATAGAAAACCTTAAACGTTGTTGTCTCCCCATATTT
FD547229       <-- CAGTTGTGTACTTTATAG................................
EV571168       <-- CAGTTGTGTACTTTATAGAAACCCTTAAACGTTGTTGTCTCCCCGTATTT
EY934341       <-- CAGTTGTGTACTTTATAGAAAACCTTAAACGTTGTTGTCTCCCCATATTT
FD961375       <-- CAGTTGTGCACTTTATAGAAAACCTT........................
FD935072       <-- CAGTTGTGTACTTTATAGAAAACCTTAAACGTTGTTGTCTCCCCATATTT
EX766129       --> ..................................................
EY916718       --> ..................................................
EY938145       --> ..................................................
FD532556       --> ..................................................
FD533790       --> ..................................................
FD550152       --> ..................................................
FD576390       --> ..................................................
FD954967       --> ..................................................
FD965703       --> ..................................................
EV536062       --> ..................................................
EV565930       --> ..................................................
EV570353       --> ..................................................
FD955083       --> ..................................................
FD971676       --> ..................................................
FD988267       --> ..................................................
EX903033       --> ..................................................
FD962790       --> ..................................................
FD551329       --> ..................................................
EY940152       --> ..................................................
EX755251       --> ..................................................
EV538703       --> ..................................................
EY945738       --> ..................................................
FD532801       --> ..................................................
FD954897       --> ..................................................
EV538888       --> ..................................................
FD938790       --> ..................................................
FD580743       --> ..................................................
FD949001       --> ..................................................
FD980308       --> CAGTTGTGTACTTTATAGAAA-CCTTAAACGTTGTTGTCTCCCCATATTT

               1146   -   1196
UN22948        --> TTTTAATATAACCTTGTTACACATGATTTCTTTTCCAAAGTGTAACCAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767780       <-- ..................................................
EY935955       <-- ..................................................
EV540594       <-- TTCTAATATAACCcatgatttcttttcc......................
EV542803       <-- TTCTAATATAACCcatgatctcttttcc......................
FD546128       <-- ..................................................
EX769815       <-- ..................................................
FD959263       <-- TTCTAATATAACCTTGTTACACAgg.........................
EY941956       <-- ..................................................
FD976211       <-- TTCTAATATAACCTTGTTACACAT..........................
EY912354       <-- ..................................................
FD552539       <-- ..................................................
FD580889       <-- TTTTAATATAACCTTGT.................................
FD984183       <-- TTCTAATATAACCTTGTTACACATc.........................
EY935130       <-- ..................................................
FD529166       <-- TTTTAATATAACCTTGTTACAC............................
FD528987       <-- TTCTAATATAACCTTGTTACACATG.........................
FD547229       <-- ..................................................
EV571168       <-- TTTTAATATAACCTTGTTACgc............................
EY934341       <-- TTTTAATATAACCTTGTTACACAcg.........................
FD961375       <-- ..................................................
FD935072       <-- TTTTAATATAACCTTGTTACACATGATTTCTTTTCCAAAGTGTAACCAGT
EX766129       --> ..................................................
EY916718       --> ..................................................
EY938145       --> ..................................................
FD532556       --> ..................................................
FD533790       --> ..................................................
FD550152       --> ..................................................
FD576390       --> ..................................................
FD954967       --> ..................................................
FD965703       --> ..................................................
EV536062       --> ..................................................
EV565930       --> ..................................................
EV570353       --> ..................................................
FD955083       --> ..................................................
FD971676       --> ..................................................
FD988267       --> ..................................................
EX903033       --> ..................................................
FD962790       --> ..................................................
FD551329       --> ..................................................
EY940152       --> ..................................................
EX755251       --> ..................................................
EV538703       --> ..................................................
EY945738       --> ..................................................
FD532801       --> ..................................................
FD954897       --> ..................................................
EV538888       --> ..................................................
FD938790       --> ..................................................
FD580743       --> ..................................................
FD949001       --> ..................................................
FD980308       --> T-CTAATATAACCTTGTTACACAT..........................

               1196   -   1246
UN22948        --> GAGGTATCTAGATAACTGACCTCTTAATCATTCAACACTAGACAATACGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767780       <-- ..................................................
EY935955       <-- ..................................................
EV540594       <-- ..................................................
EV542803       <-- ..................................................
FD546128       <-- ..................................................
EX769815       <-- ..................................................
FD959263       <-- ..................................................
EY941956       <-- ..................................................
FD976211       <-- ..................................................
EY912354       <-- ..................................................
FD552539       <-- ..................................................
FD580889       <-- ..................................................
FD984183       <-- ..................................................
EY935130       <-- ..................................................
FD529166       <-- ..................................................
FD528987       <-- ..................................................
FD547229       <-- ..................................................
EV571168       <-- ..................................................
EY934341       <-- ..................................................
FD961375       <-- ..................................................
FD935072       <-- GAGGTATCTAGATAACTGACCTCTTAATCATTCAACACTAGACAATACGT
EX766129       --> ..................................................
EY916718       --> ..................................................
EY938145       --> ..................................................
FD532556       --> ..................................................
FD533790       --> ..................................................
FD550152       --> ..................................................
FD576390       --> ..................................................
FD954967       --> ..................................................
FD965703       --> ..................................................
EV536062       --> ..................................................
EV565930       --> ..................................................
EV570353       --> ..................................................
FD955083       --> ..................................................
FD971676       --> ..................................................
FD988267       --> ..................................................
EX903033       --> ..................................................
FD962790       --> ..................................................
FD551329       --> ..................................................
EY940152       --> ..................................................
EX755251       --> ..................................................
EV538703       --> ..................................................
EY945738       --> ..................................................
FD532801       --> ..................................................
FD954897       --> ..................................................
EV538888       --> ..................................................
FD938790       --> ..................................................
FD580743       --> ..................................................
FD949001       --> ..................................................
FD980308       --> ..................................................

               1246   -   1296
UN22948        --> GTTGCTTGCGGGTCAGGCAACTCTTTAAAGTTATCTTATTCTTTACAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767780       <-- ..................................................
EY935955       <-- ..................................................
EV540594       <-- ..................................................
EV542803       <-- ..................................................
FD546128       <-- ..................................................
EX769815       <-- ..................................................
FD959263       <-- ..................................................
EY941956       <-- ..................................................
FD976211       <-- ..................................................
EY912354       <-- ..................................................
FD552539       <-- ..................................................
FD580889       <-- ..................................................
FD984183       <-- ..................................................
EY935130       <-- ..................................................
FD529166       <-- ..................................................
FD528987       <-- ..................................................
FD547229       <-- ..................................................
EV571168       <-- ..................................................
EY934341       <-- ..................................................
FD961375       <-- ..................................................
FD935072       <-- GTTGCTTGCGGGTCAGGCAACTCTTTAAAGTTATCTTATTCTTTACAAAT
EX766129       --> ..................................................
EY916718       --> ..................................................
EY938145       --> ..................................................
FD532556       --> ..................................................
FD533790       --> ..................................................
FD550152       --> ..................................................
FD576390       --> ..................................................
FD954967       --> ..................................................
FD965703       --> ..................................................
EV536062       --> ..................................................
EV565930       --> ..................................................
EV570353       --> ..................................................
FD955083       --> ..................................................
FD971676       --> ..................................................
FD988267       --> ..................................................
EX903033       --> ..................................................
FD962790       --> ..................................................
FD551329       --> ..................................................
EY940152       --> ..................................................
EX755251       --> ..................................................
EV538703       --> ..................................................
EY945738       --> ..................................................
FD532801       --> ..................................................
FD954897       --> ..................................................
EV538888       --> ..................................................
FD938790       --> ..................................................
FD580743       --> ..................................................
FD949001       --> ..................................................
FD980308       --> ..................................................

               1296   -   1346
UN22948        --> TTTCATTTTTTCTATATTCCAAATCAAAAATACAATTTGTTTTGTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767780       <-- ................................................
EY935955       <-- ................................................
EV540594       <-- ................................................
EV542803       <-- ................................................
FD546128       <-- ................................................
EX769815       <-- ................................................
FD959263       <-- ................................................
EY941956       <-- ................................................
FD976211       <-- ................................................
EY912354       <-- ................................................
FD552539       <-- ................................................
FD580889       <-- ................................................
FD984183       <-- ................................................
EY935130       <-- ................................................
FD529166       <-- ................................................
FD528987       <-- ................................................
FD547229       <-- ................................................
EV571168       <-- ................................................
EY934341       <-- ................................................
FD961375       <-- ................................................
FD935072       <-- TTTCATTTTTTCTATATTCCAAATCAAAAATACAATTTGTTTTGTTCC
EX766129       --> ................................................
EY916718       --> ................................................
EY938145       --> ................................................
FD532556       --> ................................................
FD533790       --> ................................................
FD550152       --> ................................................
FD576390       --> ................................................
FD954967       --> ................................................
FD965703       --> ................................................
EV536062       --> ................................................
EV565930       --> ................................................
EV570353       --> ................................................
FD955083       --> ................................................
FD971676       --> ................................................
FD988267       --> ................................................
EX903033       --> ................................................
FD962790       --> ................................................
FD551329       --> ................................................
EY940152       --> ................................................
EX755251       --> ................................................
EV538703       --> ................................................
EY945738       --> ................................................
FD532801       --> ................................................
FD954897       --> ................................................
EV538888       --> ................................................
FD938790       --> ................................................
FD580743       --> ................................................
FD949001       --> ................................................
FD980308       --> ................................................