RadishBase

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Alignment for radish unigene UN22951

               1      -     51
UN22951        --> GGTTTCTAAATACTCGTTCGTTACACTGGTTATTAAAATATAAAAGAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755937       <-- ..................................................
FD556559       <-- ..................................................
EX765591       <-- ..................................................
FD987616       <-- ..................................................
EY897542       <-- ..................................................
FD962792       <-- ..................................................
EX903452       <-- ..................................................
EX757304       <-- ..................................................
EX746345       <-- ..................................................
EX887603       <-- ..................................................
EX763595       <-- ..................................................
FD579151       <-- ..................................................
FD971863       <-- ..................................................
FD534368       <-- ..................................................
EY940432       <-- ..................................................
FD959265       --> GGTTTCTAAATACTCGTTCGTTACACTGGTTATTAAAATATAAAAGAGCC
EY936190       --> ...........................GGTTATTAAAATATAAAAGAGCC
EX907511       --> ......................................TATAAAAGAGCC
EX750770       --> ................................................CC
EX767650       --> ................................................CC
EX891719       --> ................................................CC
FD943165       --> ................................................CC
FD967880       --> ................................................CC
FD530325       --> ..................................................
EX760925       --> ..................................................

               51     -    101
UN22951        --> AGTTTATTTGGGCCATATGAGCTTATAAAGCCCATTAGTATACAAGTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755937       <-- ..................................................
FD556559       <-- ..................................................
EX765591       <-- ..................................................
FD987616       <-- ..................................................
EY897542       <-- ..................................................
FD962792       <-- ..................................................
EX903452       <-- ..................................................
EX757304       <-- ..................................................
EX746345       <-- ..................................................
EX887603       <-- ..................................................
EX763595       <-- ..................................................
FD579151       <-- ..................................................
FD971863       <-- ..................................................
FD534368       <-- ..................................................
EY940432       <-- ..................................................
FD959265       --> AGTTTATTTGGGCCATATGAGCTTATAAAGCCCATTAGTATACAAGTTAA
EY936190       --> AGTTTATTTGGGCCATATAAGCTTATAAAGCCCATTAGTATCCAAGTTAA
EX907511       --> AGTTTATTTGGGCCATATGAGCTTTTAAAGCCCATTAGTATACAAGTTAA
EX750770       --> AGTTTATTTGGGCCATATGAGCTTATAAAGCCCATTAGTATACAAGTTAA
EX767650       --> AGTTTATTTGGGCCATATGAGCTTATAAAGCCCATTAGTATACAAGTTAA
EX891719       --> AGTTTATTTGGGCCATATGAGCTTATAAAGCCCATTAGTATCCAAGTTAA
FD943165       --> AGTTTATTTGGGCCATATGAGCTTATAAAGCCCATTAGTATCCAAGTTAA
FD967880       --> AGTTTATTTGGGCCATATGAGCTTATAAAGCCCATTAGTATACAAGTTAA
FD530325       --> .........GGGCCATATGAGCTTATAAAGCCCATTAGTATACAAGTTAA
EX760925       --> ..................................................

               101    -    151
UN22951        --> CATGACAAGGAAAGAATGAAAAATACATTCGTCCTTGTATCAGTTT-CAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755937       <-- ..................................................
FD556559       <-- ..................................................
EX765591       <-- ..................................................
FD987616       <-- ..................................................
EY897542       <-- ..................................................
FD962792       <-- ..................................................
EX903452       <-- ..................................................
EX757304       <-- ..................................................
EX746345       <-- ..................................................
EX887603       <-- ..................................................
EX763595       <-- ..................................................
FD579151       <-- ..................................................
FD971863       <-- ..................................................
FD534368       <-- ..................................................
EY940432       <-- ..................................................
FD959265       --> CATGACAAGGAAAGAATGAAAAATACATTCGTCCTTGTATCAGTTT-CAA
EY936190       --> CATGACAAGGAAAGAATGAAAAATACATTCGTCCTTGTATCAGTTT-CAA
EX907511       --> CATGACAAGGAAAGAATGAAAAATACATTCGTCCTTGTATCAGTTT-CAA
EX750770       --> CATGACAAGGAAAGAATGAAAAATACATTCGTCCTTGTATCAGTTT-CAA
EX767650       --> CATGACAAGGAAAGAATGAAAAATACATTCGTCCTTGTATCAGTTT-CAA
EX891719       --> CATGACAAGGAAAGAATGAAAAATACATTCGTCCTTGTATCAGTTT-CAA
FD943165       --> CATGACAAGGAAAGAATGAAAAATACATTCGTCCTTGTATCAGTTT-CAA
FD967880       --> CATGACAAGGAAAGAATGAAAAATACATTCGTCCTTGTATCAGTTT-CAA
FD530325       --> CATGACAAGGAAAGAATGAAAAATACATTCGTCCTTGTATCAGTTT-CAA
EX760925       --> ...............................TCCTTGTATCAGTTTTCAA

               151    -    201
UN22951        --> ATTATACAATATAACAAAATTGCAACATCTCAAGAAAGAACAACAACAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755937       <-- ..................ATTGCAACATCTCAAGAAAGAACAACAACAAA
FD556559       <-- ................................tcaagaagacACAACAAA
EX765591       <-- ..................................................
FD987616       <-- ..................................................
EY897542       <-- ..................................................
FD962792       <-- ..................................................
EX903452       <-- ..................................................
EX757304       <-- ..................................................
EX746345       <-- ..................................................
EX887603       <-- ..................................................
EX763595       <-- ..................................................
FD579151       <-- ..................................................
FD971863       <-- ..................................................
FD534368       <-- ..................................................
EY940432       <-- ..................................................
FD959265       --> ATTATACAATATAACAAAATTGCAACATCTCAAGAAAGAACAACAACAAA
EY936190       --> ACTATACAATATAACAAAATTGCAACATCTCAAGAAAGAACAACAACAAA
EX907511       --> ATTATACAATATAACAAAATTGCAACATCTCAAGAAAGAACAACAACAAA
EX750770       --> ATTATACAATATAACAAAATTGCAACATCTCAAGAAAGAACAACAACAAA
EX767650       --> ATTATACAATATAACAAAATTGCAACATCTCAAGAAAGAACAACAACAAA
EX891719       --> ACTATACAATATAACAAAATTGCAACATCTCAAGAAAGAACAACAACAAA
FD943165       --> ACTATACAATATAACAAAATTGCAACATCTCAAGAAAGAACAACAACAAA
FD967880       --> ATTATACAATATAACAAAATTGCAACATCTCAAGAAAGAACAACAACAAA
FD530325       --> ATTATACAATATAACAAAATTGCAACATCTCAAGAAAGAACAACAACAAA
EX760925       --> ATTATACAATATAACAAAATTGCAACATCTCAAGAAAGAACAACAACAAA

               201    -    251
UN22951        --> AATAACAA-GAGAAAACTGTAATATTCAGATATAATTATTTAAAACAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755937       <-- AATAACAA-GCGAAAACTGTAATATTCAGATATAATTATTTAAAACAATA
FD556559       <-- A-TAACAA-GAGAAA-CTGTAATATTCAGATATA-TT-TTTAAA-CAATA
EX765591       <-- ......cA-GAGAAA-CTGTAATAT-CAGATATA-TTATTTAAA-CAATA
FD987616       <-- .......................................TTAAAACAATA
EY897542       <-- ..................................................
FD962792       <-- ..................................................
EX903452       <-- ..................................................
EX757304       <-- ..................................................
EX746345       <-- ..................................................
EX887603       <-- ..................................................
EX763595       <-- ..................................................
FD579151       <-- ..................................................
FD971863       <-- ..................................................
FD534368       <-- ..................................................
EY940432       <-- ..................................................
FD959265       --> AATAACAA-GAGAAAACTGTAATATTCAGATATAATTATTTAAAACAATA
EY936190       --> AATAACAA-GAGAAAACTGTAATATTCAGATATAATTATTTAAAACAATA
EX907511       --> AATAACAAAGAGAAAACTGTAATATTCAGATACAATTATTTAAAACAATA
EX750770       --> AATAACAA-GAGAAAACTGTAATATTCAGATATAATTATTTAAAACAATA
EX767650       --> AATAACAA-GAGAAAACTGTAATATTCAGATATAATTATTTAAAACAATA
EX891719       --> AATAACAA-GAAAAAACTGTAATATTCAAATATAATTATTTAAAACAATA
FD943165       --> AATAACAA-GAGAAAACTGTAATATTCAGATATAATTATTTAAAACAATA
FD967880       --> AATAACAA-GAGAAAACTGTAATATTCAGATATAATTATTTAAAACAATA
FD530325       --> AATAACAA-GAGAAAACTGTAATATTCAGATATAATTATTTAAAACAATA
EX760925       --> AATAACAA-GAGAAAACTGTAATATTCAGATATAATTATTTAAAACAATA

               251    -    301
UN22951        --> TTCTGCTGCCAAGAATGATCCCTTTCGCCGTATGGGAATATAAATATGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755937       <-- TTCTGCTGCCAAGAATGATCCCTTTCGCCGTATGGGAATATAAATATGCA
FD556559       <-- GTCTGCTGCCAAGAATGATCCCTTTCGC-GTATGGGAATATAAATATGCA
EX765591       <-- TTCTGCTGCCAAGAATGATCCCTTTCGC-GTATGGGAATATAAATA-GCA
FD987616       <-- GTCTGCTGCCAAGAATGATCCCTTTCGCCGTATGGGAATATAAATATGCA
EY897542       <-- .......................TTCGC-GTATGGGAATATAA-TATGCA
FD962792       <-- .......................TTCGCCGTATGGGAATATAAATATGCA
EX903452       <-- .........................ttgCGTATGAGAATATAAATATGCA
EX757304       <-- ................................TGGGA-TATAAATATGCA
EX746345       <-- ...............................................GCA
EX887603       <-- ..................................................
EX763595       <-- ..................................................
FD579151       <-- ..................................................
FD971863       <-- ..................................................
FD534368       <-- ..................................................
EY940432       <-- ..................................................
FD959265       --> TTCTGCTGCCAAGAATGATCCCTTTCGCCGTATGGGAATATAAATATGCA
EY936190       --> TTCTGCTGCCAAGAATGATCCCTTTCGCCGTAAGGGAATATAAATATGCA
EX907511       --> TTCTGCTGCCAAGAATGATCCCTTTTGCCGTATGGGAATATAAATATGCA
EX750770       --> TTCTGCTGCCAAGAATGATCCCTTTCGCCGTATGGGAATATAAATATGCA
EX767650       --> TTCTGCTGCCAAGAATGATCCCTTTCGCCGTATGGGAATATAAATATGCA
EX891719       --> TTCTGCTGCCAAGAATGATCCCTTTCGCCGTAAGGGAATATAAATATGCA
FD943165       --> TTCTGCTGCCAAGAATGATCCCTTTCGCCGTAAGGGAATATAAATATGCA
FD967880       --> TTCTACTGCCAAGAATGATCCCTTTCGCCGTATGGGAATATAAATATGCA
FD530325       --> TTCTGCTGCCAAGAATGATCCCTTTCGCCGTATGGGAATATAAATATGCA
EX760925       --> TTCTGCTGCCAAGAATGATCCCTTTCGCCGTATGGGAATATAAATATGCA

               301    -    351
UN22951        --> GCTTGTGCGTACGTTCATCTCCTCAAGCTATGGAGAATGTACTCAGCGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755937       <-- GCTTGTGCGTACGTTCATCTCCTCAAGCTATGGAGAATGTACTCAGCGTA
FD556559       <-- GCTTGTGCGTACGTTCATCTCCTCAAGCTATGGAGAATGTACTCAGCGTA
EX765591       <-- GCTTGTGCGTACGTTCATCTCCTCAAGCTATGGAGAATGTACTCAGCGTA
FD987616       <-- GCTTGTGCGTACGTTCATCTCCTCAAGCTATGGAGAATGTACTCAGCGTA
EY897542       <-- GCTTGTGCGTACGTTCATCTCCTCAAGCTATGGAGAATGTACTCAGCGTA
FD962792       <-- GCTTGTGCGTACGTTCATCTCCTCAAGCTATGGAGAATGTACTCAGCGTA
EX903452       <-- GCTTGTGCGTACGTTCATCTCCTCAAGCTATGGAGAATGTACTCAGCGTA
EX757304       <-- GCTTGTGCGTACGT-CATCTCCTCAAGCTATG-AG-ATGTACTCAGCGTA
EX746345       <-- GCTTGTGCGTACGTTCATCTCCTCAAGCTATGGAGAATGTACTCAGCGTA
EX887603       <-- ...................................gATGTACTCAGCGTA
EX763595       <-- ..................................................
FD579151       <-- ..................................................
FD971863       <-- ..................................................
FD534368       <-- ..................................................
EY940432       <-- ..................................................
FD959265       --> GCTTGTGCGTACGTTCATCTCCTCAAGCTATGGAGAATGTACTCAGCGTA
EY936190       --> GCTTGTGCGTACGTTCATCTCCTCAAGCTATGGAGAATGTACTCAGCGTA
EX907511       --> GCTTGTGCGTACGTTCATCTCCTCAAGCTATGGAGAATGTACTCAGCGTA
EX750770       --> GCTTGTGCGTACGTTCATCTCCTCAAGCTATGG.................
EX767650       --> GCTTGTGCGTACGTTCATCTCCTCAAGCTATGGAGAATGTACTCAGCGTA
EX891719       --> GCTTGTGCGTACGTTCATCTCCTCAAGCTATGGAGAATGTACTCAGCGTA
FD943165       --> GCTTGTGCGTACGTTCATCTCCTCAAGCTATGGAGAATGTACTCAGCGTA
FD967880       --> GCTTGTGCGTACGTTCATCTCCTCAAGCTATGGAGAATGTACTCAGCGTA
FD530325       --> GCTTGTGCGTACGTTCATCTCCTCAAGCTATGGAGAATGTACTCAGCGTA
EX760925       --> GCTTGTGCGTACGTTCATCTCCTCAAGCTATGGAGAATGTACTCAGCGTA

               351    -    401
UN22951        --> TAGGTCCATGGAGTACTGGATTGCTTCATGTGCCTTTTCCGATGGCAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755937       <-- TAGGTCCATGGAGTACTGGATTGCTTCATGTGCCTTTTCCGATGGCAAGA
FD556559       <-- TAGGTCCATGGAGTACTGGATTGCTTCATGTGCCTTTTCCGATGGCAAGA
EX765591       <-- TAGGTCCATGGAGTACTGGATTGCTTCATGTGCCTTTTCCGATGGCAAGA
FD987616       <-- TAGGTCCATGGAGTACTGGATTGCTTCATGTGCCTTTTCCGATGGCAAGA
EY897542       <-- TAGGTCCATGGAGTACTGGATTGCTTCATGTGCCTTTTCCGATGGCAAGA
FD962792       <-- TAGGTCCATGGAGTACTGGATTGCTTCATGTGC-TTTTCCGATGGCAAGA
EX903452       <-- TAGGTCCATGGAGTACTGGATTGCTTCATGTGCCTTTTCCGATGGCAAGA
EX757304       <-- TAGGTCCATGGAGTACTGGATTGCTTCATGTGC-TTTTCCGATGGCAAGA
EX746345       <-- TAGGTCCATGGAGTACTGGATTGCTTCATGTGCCTTTTCCGATGGCAAGA
EX887603       <-- TAG-TCCATGGAGTACTGGATTGCTTCATGTGC-TTTTCCGATGGCAAGA
EX763595       <-- .....................................TCCGATGGCAAGA
FD579151       <-- ......................................CCGATGGAAAG-
FD971863       <-- ...........................................GGCAAGA
FD534368       <-- ..................................................
EY940432       <-- ..................................................
FD959265       --> TAGGTCCATGGAGTACTGGATTGCTTCATGTGCCTTTTCCGATGGCAAGA
EY936190       --> TAGGTCCATGGAGTACTGGATTGCTTCATGTGCCTTTTCCGATGGCAAGA
EX907511       --> TAGGTCCATGGAGTACTGGATTGCTTCATGTGCCTTTTCCGATGGCAAGA
EX750770       --> ..................................................
EX767650       --> TAGGTCCATGGAGTACTGGATTGCTTCATGTGCCTTTTCCGATGGCAAGA
EX891719       --> TAGGTCCATGGAGTACTGGATTGCTTCATGTGCCTTTTCCGATGGCAAGA
FD943165       --> TAGGTCCATGGAGTACTGGATTGCTTCATGTGCCTTTTCCGATGGCAAGA
FD967880       --> TAGGTCCATGGAGTACTGGATTGCTTCATGTGCCTTTTCCGATGGCAAGA
FD530325       --> TAGGTCCATGGAGTACTGGATTGCTTCATGTGCCTTTTCCGATGGCAAGA
EX760925       --> TAGGTCCATGGAGTACTGGATTGCTTCATGTGCCTTTTCCGATGGCAAGA

               401    -    451
UN22951        --> AATCGTTTACAGCCACCTCCTTGTGCTCGTTCTTCTTGTAGTCTTCGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755937       <-- AATCGTTTACAGCCACCTCCTTGTGCTCGTTCTTCTTGTAGTCTTCAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556559       <-- AATCGTTTACAGCCACCTCCTTGTGCTCGTTCTTCTTGTAGTCTTCGAAG  Raphanus raphanistrum subsp. landra
EX765591       <-- AGTCGTTTACAGCCACCTCCTTGTGCTCGTTCTTCTTGTAGTCTTCGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD987616       <-- AATCGTTTACAGCCACCTCCTTGTGCTCGTTCTTCTTGTAGTCTTCGAAG  Raphanus raphanistrum subsp. landra
EY897542       <-- AATCGTTTACAGCCACCTCCTTGTGCTCGTTCTTCTTGTAGTCTTCGAAG  Raphanus raphanistrum subsp. maritimus
FD962792       <-- AATCGTTTACAGCCACCTCCTTGTGCTCGTTCTTCTTGTAGTCTTCGAAG  Raphanus raphanistrum subsp. maritimus
EX903452       <-- AATCGTTGACAGCCACCTCCTTGTGCTCGTTCTTCTTGTAGTCTTCAAAG  Raphanus sativus cv Rat-Tail Radish #3870
EX757304       <-- AATCGTTTACAGCCACCTCCTTGTGCTCGTTCTTCTTGTAGTCTTCAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX746345       <-- AATCGTTTACAGCCACCTCCTTGTGCTCGTTCTTCTTGTAGTCTTCGAAG  Raphanus raphanistrum subsp. maritimus
EX887603       <-- AATCGTTTACAGCCACCTCCTTGTGCTCGTTCTTCTTGTAGTCTTCGAAG  Raphanus sativus var. oleiformis
EX763595       <-- AATCGTTTACAGCCACCTCCTTGTGCTCGTTCTTCTTGTAGTCTTCGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579151       <-- -ATCGTTGACAGCCACCTCCTTGTGCTCGTTCTTCTTGTAGTCTTCAAAG  Raphanus sativus cv Rat-Tail Radish #3870
FD971863       <-- AATCGTTTACAGCCACCTCCTTGTGCTCGTTCTTCTTGTAGTCTTCAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD534368       <-- ......................GTGCTCGTTCTTCTTGTAGTCTTCGAAG  Raphanus raphanistrum subsp. maritimus
EY940432       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD959265       --> AATCGTTTACAGCCACCTCCTTGTGCTCGTTCTTCTTGTAGTCTTCGAAG  Raphanus raphanistrum subsp. maritimus
EY936190       --> AATCGTTTACAGCCACCTCCTTGTGCTCGTTCTTCTTGTAGTCTTCGAAG  Raphanus sativus cv Early Scarlet Globe
EX907511       --> AATCGTTGACAGCCACCTCCTTGTG.........................  Raphanus sativus cv Rat-Tail Radish #3870
EX750770       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX767650       --> AATCGTTTACAGCCACCTCCTTGTGCTCGTTCTTCTTGTAGTCTTCGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX891719       --> AATCGTTTACAGCCACCTCCTTGTGCTCGTTCTTCTTGTAGTCTTCGAAA  Raphanus sativus var. oleiformis
FD943165       --> AATCGTTTACAGCCACCTCCTTGTGCTCGTTCTTCTTGTAGTCTTCGAAG  Raphanus sativus cv Early Scarlet Globe
FD967880       --> AATCGTTTACAGCCACCTCCTTGTGCTCGTTCTTCTTGTAGTCTTCAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530325       --> AATCGTTTACAGCCACCTCCTTGTGCTCGTTCTTCTTGTAGTCTTCGAAG  Raphanus raphanistrum subsp. maritimus
EX760925       --> AATCGTTTACAGCCACCTCCTTGTGCTCGTTCTTCTTGTAGTCTTCAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)

               451    -    501
UN22951        --> AAACGACGGATCTCTGAGAGACGGTGAGGAGCGAGTTGTTTGATGTCAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755937       <-- AAACGACGAATCTCTGAGAGACGGTGAGGAGCGAGTTGTTTGATGTCAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556559       <-- AAACGACGGATCTCTGAGAGACGGTGAGGAGCGAGTTGTTTGATGTCAGT  Raphanus raphanistrum subsp. landra
EX765591       <-- AAACGACGGATCTCTGAGAGACGGTGAGGAGCGAGTTGTTTGATGTCAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD987616       <-- AAACGACGGATCTCTGAGAGACGGTGAGGAGCGAGTTGTTTGATGTCAGT  Raphanus raphanistrum subsp. landra
EY897542       <-- AAACGACGGATCTCTGAGAGACGGTGAGGAGCGAGTTGTTTGATGTCAGT  Raphanus raphanistrum subsp. maritimus
FD962792       <-- AAACGACGGATCTCTGAGAGACGGTGAGGAGCGAGTTGTTTGATGTCAGT  Raphanus raphanistrum subsp. maritimus
EX903452       <-- AAACGACGAATCTCTGAGAGACGGTGAGGAGCGAGTTGTTTGATGTCAGT  Raphanus sativus cv Rat-Tail Radish #3870
EX757304       <-- AAACGACGAATCTCTGAGAGACGGTGAGGAGCGAGTTGTTTGATGTCAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX746345       <-- AAACGACGGATCTCTGAGAGACGGTGAGGAGCGAGTTGTTTGATGTCAGT  Raphanus raphanistrum subsp. maritimus
EX887603       <-- AAACGACGGATCTCTGAGAGACGGTGAGGAGCGAGTTGCTTGATGTCAGT  Raphanus sativus var. oleiformis
EX763595       <-- AAACGACGGATCTCTGAGAGACGGTGAGGAGCGAGTTGTTTGATGTCAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579151       <-- AAACGACGAATCTCTGAGAGACGGTGAGGAGCGAGTTGTTTGATGTCAGT  Raphanus sativus cv Rat-Tail Radish #3870
FD971863       <-- AAACGACGAATCTCTGAGAGACGGTGAGGAGCGAGTTGTTTGATGTCAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD534368       <-- AAACGACGGATCTCTGAGAGACGGTGAGGAGCGAGTTGTTTGATGTCAGT  Raphanus raphanistrum subsp. maritimus
EY940432       <-- ................AGAGACGGTGAGGAGCGAGTTGTTTGATGTCAGT  Raphanus sativus cv Early Scarlet Globe
FD959265       --> AAACGACGGATCTCTGAGAGACGGTGAGGAGCGAGTTGTTTGATGTCAGT  Raphanus raphanistrum subsp. maritimus
EY936190       --> AAACGACGGATCTCTGAGAGACGGTGAGGAGCGAGTTGTTTGATGTCAGT  Raphanus sativus cv Early Scarlet Globe
EX907511       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX750770       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX767650       --> AAACGACGGATCTCTGAGAGACGGTGAGGAGCGAGTTGTTTGATGTCAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX891719       --> AAACGACGGATCTCTGAAAGACGGTGAGGAGCGAGTTGCTTGATGTCAGT  Raphanus sativus var. oleiformis
FD943165       --> AAACGACGGATCTCTGAGAGACGGTGAGGAGCGAGTTGTTTGATGTCAGT  Raphanus sativus cv Early Scarlet Globe
FD967880       --> AAACGACGAATCTCTGAGAGACGGTGAGGAGCGAGTTGTTTGATGTCAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530325       --> AAACGACGGATCTCTGAGAGACGGTGAGGAGCGAGTTGTTTGATGTCAGT  Raphanus raphanistrum subsp. maritimus
EX760925       --> AAACGACGAATCTCTGAAAGACGGTGAGGAGCGAGTTGTTTGATGTCAGT  Raphanus raphanistrum subsp. raphanistrum (MS)

               501    -    551
UN22951        --> GAAATGTCTGTACTCAGGATCATCAGCACAGACCGCTATGATCTTGTCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755937       <-- GAAATGTTTGTACTCAGGATCATCAGCACACACCGCTATGATCTTGTCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556559       <-- GAAATGTCTGTACTCAGGATCATCAGCACAGACCGCTATGATCTTGTCGT  Raphanus raphanistrum subsp. landra
EX765591       <-- GAAATGTCTGTACTCAGGATCATCAGCACACACCGCTATGATCTTGTCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD987616       <-- GAAATGTCTGTACTCAGGATCATCAGCACAGACCGCTATGATCTTGTCGT  Raphanus raphanistrum subsp. landra
EY897542       <-- GAAATGTCTGTACTCAGGATCATCAGCACAGACCGCTATGATCTTGTCGT  Raphanus raphanistrum subsp. maritimus
FD962792       <-- GAAATGTCTGTACTCAGGATCATCAGCACAGACCGCTATGATCTTGTCGT  Raphanus raphanistrum subsp. maritimus
EX903452       <-- GAAATGTCTGTACTCAGGATCATCAGCACACACCGCTATAATCTTGTCGT  Raphanus sativus cv Rat-Tail Radish #3870
EX757304       <-- GAAATGTCTGTACTCAGGATCATCAGCACACACCGCTATGATCTTGTCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX746345       <-- GAAATGTCTGTACTCAGGATCATCAGCACAGACCGCTATGATCCTGTCGT  Raphanus raphanistrum subsp. maritimus
EX887603       <-- GAAATGTCTGTACTCAGGATCATCAGCACAGACCGCTATGATCTTGTCGT  Raphanus sativus var. oleiformis
EX763595       <-- GAAATGTCTGTACTCAGGATCATCAGCACAGACCGCTATGATCTTGTCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579151       <-- GAAATGTCTGTACTCAGGATCATCAGCACACACCGCTATAATCTTGTCGT  Raphanus sativus cv Rat-Tail Radish #3870
FD971863       <-- GAAATGTCTGTACTCAGGATCATCAGCACACGCCGCTATGATCCTGTCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD534368       <-- GAAATGTCTGTACTCAGGATCATCAGCACAGACCGCTATGATCTTGTTGT  Raphanus raphanistrum subsp. maritimus
EY940432       <-- AAAATGTCTGTACTCAGGATCATCAGCACAGACCGCTATGATCTTGTCGT  Raphanus sativus cv Early Scarlet Globe
FD959265       --> GAAATGTCTGTACTCAGGATCATCAGCACAGACCGCTATGATCTTGTCGT  Raphanus raphanistrum subsp. maritimus
EY936190       --> AAAATGTCTGTACTCAGGATCATCAGCACAGACCGCTATGATCTTGTCGT  Raphanus sativus cv Early Scarlet Globe
EX907511       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX750770       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX767650       --> GAAATGTCTGTACTCAGGATCATCAGCACAGACCGCTATGATCTTGTCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX891719       --> GAAATGTCTGTACTCAGGATCATCAGCACAGACCGCTATGATCTTGTCGT  Raphanus sativus var. oleiformis
FD943165       --> GAAATGTCTGTACTCAGGATCATCAGCACAGACCGCTATGATCTTGTCGT  Raphanus sativus cv Early Scarlet Globe
FD967880       --> GAAATGTCTGTACTCAGGATCATCAGCACACGCCGCTATGATCCTGTCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530325       --> GAAATGTCTGTACTCAGGATCATCAGCACAGACCGCTATGATCTTGTTGT  Raphanus raphanistrum subsp. maritimus
EX760925       --> GAAATGTCTGTACTCAGGATCATCAGCACACACCGCTATGATCTTGTCGT  Raphanus raphanistrum subsp. raphanistrum (MS)

               551    -    601
UN22951        --> CCATCTCTCCCTGATCAATCATGGGCATTAATCCAATGGCTCTAGCGCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755937       <-- CCATCTCTCCCTGATCGATCATGGGCATTAATCCAATGGCTCTAGCGCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556559       <-- CCATCTCTCCCTGATCAATCATGGGCATTAATCCAATGGCTCTAGCGCGG  Raphanus raphanistrum subsp. landra
EX765591       <-- CCATCTCTCCCTGATCGATCATGGGCATTAATCCAATGGCTCTAGCGCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD987616       <-- CCATCTCTCCCTGATCAATCATGGGCATTAATCCAATGGCTCTAGCGCGG  Raphanus raphanistrum subsp. landra
EY897542       <-- CCATCTCTCCCTGATCAATCATGGGCATTAATCCAATGGCTCTAGCGCGG  Raphanus raphanistrum subsp. maritimus
FD962792       <-- ACATCTCTCCCTGATCAATCATGGGCATTAATCCAATGGCTCTAGCGCGG  Raphanus raphanistrum subsp. maritimus
EX903452       <-- CCATCTCTCCCTGATCAATCATGGGCATTAATCCAATGGCTCTAGCGCGG  Raphanus sativus cv Rat-Tail Radish #3870
EX757304       <-- CCATCTCTCCCTGATCGATCATGGACATTAATCCAATGGCTCTAGCGCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX746345       <-- CCATCTCTCCCTGATCAATCATGGGCATTAATCCAATGGCTCTAGCGCGG  Raphanus raphanistrum subsp. maritimus
EX887603       <-- CCATCTCTCCCTGATCAATCATGGGCATTAATCCAATGGCTCTAGCGCGG  Raphanus sativus var. oleiformis
EX763595       <-- CCATCTCTCCCTGATCAATCATGGGCATTAATCCAATGGCTCTAGCGCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579151       <-- CCATCTCTCCCTGATCAATCATGGGCATTAATCCAATGGCTCTAGCGCGG  Raphanus sativus cv Rat-Tail Radish #3870
FD971863       <-- CCATCTCTCCCTGATCGATCATGGGCATTAATCCAATGGCTCTAGCGCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD534368       <-- CCATCTCTCCCTGATCAATCATGGGCATTAATCCAATGGCTCTAGCGCGG  Raphanus raphanistrum subsp. maritimus
EY940432       <-- CCATCTCTCCCTGATCAATCATGGGCATTAATCCACTGGCTCTAGCGCGG  Raphanus sativus cv Early Scarlet Globe
FD959265       --> ACATCTCTCCCTGATCAATCATGGGCATTAATCCAATGGCTCTAGCGCGG  Raphanus raphanistrum subsp. maritimus
EY936190       --> CCATCTCTCCCTGATCAATCATGGGCATTAATCCACTGGCTCTAGCGCGG  Raphanus sativus cv Early Scarlet Globe
EX907511       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX750770       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX767650       --> CCATCTCTCCCTGATCAATCATGGGCATTAATCCAATGGCTCTAGCGCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX891719       --> CCATCTCTCCCTGATCAATCATGGGCATTAATCCAATGGCTCTAGCGCGG  Raphanus sativus var. oleiformis
FD943165       --> CCATCTCTCCCTGATCAATCATGGGCATTAATCCAATGACTCTAGCGCGG  Raphanus sativus cv Early Scarlet Globe
FD967880       --> CCATCTCTCCCTGATCGATCATGGGCATTAATCCAATGGCTCTAGCGCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530325       --> CCATCTCTCCCTGATCAATCATGGGCATTAATCCAATGGCTCTAGCGCGG  Raphanus raphanistrum subsp. maritimus
EX760925       --> CCATCTCTCCCTGATCGATCATGGACATTAATCCAATGGCTCTAGCGCGG  Raphanus raphanistrum subsp. raphanistrum (MS)

               601    -    651
UN22951        --> AGAAAACATCCTGGAAGCACTGGTTCCTGCATGAGGACAAGAACATCGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755937       <-- AGAAAACATCCTGGAAGCACTGGTTCCTGCc...................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556559       <-- AGAAAACATCCTGGAAGCACTGGTTCCTGCATGAGGACAAGAACATCGAG  Raphanus raphanistrum subsp. landra
EX765591       <-- AGAAAACATCCTGGAAGCACTGGTTCCTGCATGAGGACAAGAACATCGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD987616       <-- AGAAAACATCCTGGAAGCACTGGTTCCTGCATGAGGACAAGAACATCGAG  Raphanus raphanistrum subsp. landra
EY897542       <-- AGAAAACATCCTGGAAGCACTGGTTCCTGCATGAGGACAAGAACATCGAG  Raphanus raphanistrum subsp. maritimus
FD962792       <-- AGAAAACATCCTGGAAGCACTGGTTCCTGCATGAGGACAAGAACATCGAG  Raphanus raphanistrum subsp. maritimus
EX903452       <-- AGAAAACATCCTGGAAGCACTGGTTCCTGCATGAGGACAAGAACATCGAG  Raphanus sativus cv Rat-Tail Radish #3870
EX757304       <-- AGAAAACATCCTGGAAGCACTGGTTCCTGCATGAGGACAAGAACATCGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX746345       <-- AGAAAACATCCTGGAAGCACTGGTTCCTGCATGAGGACAAGAACATCGAG  Raphanus raphanistrum subsp. maritimus
EX887603       <-- AGAAAACATCCTGGAAGCACTGGTTCCTGCATAAGGACAAGAACATCGAG  Raphanus sativus var. oleiformis
EX763595       <-- AGAAAACATCCTGGAAGCACTGGTTCCTGCATGAGGACAAGAACATCGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579151       <-- AGAAAACATCCTGGAAGCACTGGTTCCTGCATGAGGACAAGAACATCGAG  Raphanus sativus cv Rat-Tail Radish #3870
FD971863       <-- AGAAAACATCCTGGAAGCACTGGTTCCTGCATGAGGACAAGAACATCGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD534368       <-- AGAAAACATCCTGGAAGCACTGGTTCCTGCATGAGGACAAGAACATCGAG  Raphanus raphanistrum subsp. maritimus
EY940432       <-- AGAAAACATCCTGGAAGCACTGGTTCCTGCATAAGGACAAGAACATCGAG  Raphanus sativus cv Early Scarlet Globe
FD959265       --> AGAAAACATCCTGGAAGCACTGGTTCCTGCATGAGGACAAGAAC......  Raphanus raphanistrum subsp. maritimus
EY936190       --> AGAAAACATCCTGGAAGCACTGGTTCCTGCATAAGGACAAGAACATCGAG  Raphanus sativus cv Early Scarlet Globe
EX907511       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX750770       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX767650       --> AGAAAACATCCTGGAAGCACTGGTTCCTGCATGAGGACAAGAACATCGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX891719       --> AAAAAACATCCTGGAAGCACTGGTTCCTGCATAAGGACAAGAACAT....  Raphanus sativus var. oleiformis
FD943165       --> AGAAAACATCCTGGAAGCACTGGTTCCTGCATAAGGACAAGAACATCGAG  Raphanus sativus cv Early Scarlet Globe
FD967880       --> AGAAAACATCCTGGAAGCACTGGTTCCTGCATGAGGACAAGAACATCGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530325       --> AGAAAACATCCTGGAAGCACTGGTTCCTGCATGAGGACAAGAACATCGAG  Raphanus raphanistrum subsp. maritimus
EX760925       --> AGAAAACATCCTGGAAGCACTGGTTCCTGCATGAGGACAAGAACATCGAG  Raphanus raphanistrum subsp. raphanistrum (MS)

               651    -    701
UN22951        --> AGGATCGTTGTCTTCACACAATGTCCTTGGGATGAATCCATAGTTGTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755937       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556559       <-- AGGATCGTTGTCTTCACACAATGTCCTTGGGATGAATCCATAGTTGTGAG  Raphanus raphanistrum subsp. landra
EX765591       <-- AGGATCGTTGTCTTCACACAATGTCCTTGGGATGAATCCATAGTTGTGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD987616       <-- AGGATCGTTGTCTTCACACAATGTCCTTGGGATGAATCCATAGTTGTGAG  Raphanus raphanistrum subsp. landra
EY897542       <-- AGGATCATTGTCTTCACACAATGTCCTTGGGATGAATCCATAGTTGTGAG  Raphanus raphanistrum subsp. maritimus
FD962792       <-- AGGATCATTGTCTTCACACAATGTCCTTGGGATGAATCCATAGTTGTGAG  Raphanus raphanistrum subsp. maritimus
EX903452       <-- AGGATCATTGTCTTCACACAATGTCCTTGGGATGAATCCATAGTTGTGAG  Raphanus sativus cv Rat-Tail Radish #3870
EX757304       <-- AGGATCGTTGTCTTCACACAATGTCCTTGGGATGAATCCATAGTTGTGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX746345       <-- AGGATCATTGTCTTCACACAATGTCCTTGGGATGAATCCATAGTTGTGAG  Raphanus raphanistrum subsp. maritimus
EX887603       <-- AGGATCGTTGTCTTCACACAATGTCCTTGGAATGAATCCATAGTTGTGAG  Raphanus sativus var. oleiformis
EX763595       <-- AGGATCATTGTCTTCACACAATGTCCTTGGGATGAATCCATAGTTGTGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579151       <-- AGGATCATTGTCTTCACACAATGTCCTTGGGATGAATCCATAGTTGTGAG  Raphanus sativus cv Rat-Tail Radish #3870
FD971863       <-- AGGATCGTTGTCTTCACACAATGTCCTTGGGATGAATCCATAGTTGTGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD534368       <-- AGGATCATTGTCTTCACACAATGTCCTTGGGATGAATCCATAGTTGTGAG  Raphanus raphanistrum subsp. maritimus
EY940432       <-- AAGATCGTTGTCTTCACACAATGTCCTTGGAATGAATCCATAGTTGTGAG  Raphanus sativus cv Early Scarlet Globe
FD959265       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY936190       --> AAGATCGTTGTCTTCACACAATGTCCTTGGAATGAATCCATAGTTGTG..  Raphanus sativus cv Early Scarlet Globe
EX907511       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX750770       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX767650       --> AGGATCATTGTCTTCACACAATGTCCTTGGGATGAATCCATAGTTGTGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX891719       --> ..................................................  Raphanus sativus var. oleiformis
FD943165       --> AGGATCGTTGTCTTCACACAATGTCCTTGGAATGAATCCATAGTTGTGAG  Raphanus sativus cv Early Scarlet Globe
FD967880       --> AGGATCGTTGTCTTCACACAATGTCCTTGGGATGAATCCATAGTTGTGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530325       --> AGGATCATTGTCTTCACACAATGTCCTTGGGATGAATCCATAGTTGTGAG  Raphanus raphanistrum subsp. maritimus
EX760925       --> AGGATCGTTGTCTTCACACAATGTCCTTGGGATGAATCCATAGTTGTGAG  Raphanus raphanistrum subsp. raphanistrum (MS)

               701    -    751
UN22951        --> GATAAACAACCGATGAGTACAAGATCCGGTCAACCTTGATAAGACCGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755937       <-- ..................................................
FD556559       <-- GATAAACAACCGATGAGTACAAGATCCGGTCAACCTTGATAAGACCGGTC
EX765591       <-- GATAAACAACCGATGAGTACAAGATCCGGTCAACCTTGATAAGACCGGTC
FD987616       <-- GATAAACAACCGATGAGTACAAGATCCGGTCAACCTTGATAAGACCGGTC
EY897542       <-- GATAAACAACCGATGAGTACAAGATCCGGTCAACCTTGATAAGACCGGTC
FD962792       <-- GATAAACAACCGATGAGTACAAGATCCGGTCAACCTTGATAAGACCGGTC
EX903452       <-- GATAAACAACCGATGAGTACAAGATCCGGTCAACCTTGATAAGACCGGTC
EX757304       <-- GATAAACAACCGATGAGTACAAGATCCGGTCAACCTTGATAAGACCGGTC
EX746345       <-- GATAAACAACCGATGAGTACAAGATCCGGTCAACCTTGATAAGACCGGTC
EX887603       <-- GATAAACAACCGATGAGTACAAGATCCGGTCAACCTTGATAAGACCGGTC
EX763595       <-- GATAAACAACCGATGAGTACAAGATCCGGTCAACCTTGATAAGACCGGTC
FD579151       <-- GATAAACAACCGATGAGTACAAGATCCGGTCAACCTTGATAAGACCGGTC
FD971863       <-- GATAAACAACCGATGAGTACAAGATCCGGTCAACCTTGATAAGACCGGTC
FD534368       <-- GATAAACAACCGATGAGTACAAGATCCGGTCAACCTTGATAAGACCGGTC
EY940432       <-- GATAAACAACCGATGAGTACAAGATCCGGTCAACCTTGATAAGACCGGTC
FD959265       --> ..................................................
EY936190       --> ..................................................
EX907511       --> ..................................................
EX750770       --> ..................................................
EX767650       --> GATAAACAACCGATGAGTACAAGATCCGGTCAACCTTGATAAGACCGGTC
EX891719       --> ..................................................
FD943165       --> GATAAACAACCGATGAGTACAAGATCCGGTCAACCTTGATAAGACCGGTC
FD967880       --> GATAAACAACCGATGAGTACAAGATCCGGTCAACCTTGATAAGACCGGTC
FD530325       --> GATAAACAACCGATGAGTACAAGATCCGGTCAACCTTGATAAGACCGGTC
EX760925       --> GATAAACAACCGATGAGTACAAGATCCGGTCAACCTTGATAAGACCGGTC

               751    -    801
UN22951        --> TTTTTGTCAAGTTCATACTTCACTTTGCTTCCCTTTGTGATCTCAACCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755937       <-- ..................................................
FD556559       <-- TTTTTGTCAAGTTCATACTTCACTTTGCTTCCCTTTGTGATCTCAACCAC
EX765591       <-- TTTTTGTCAAGTTCATACTTCACTTTGCTTCCCTTTGTGATCTCAACCAC
FD987616       <-- TTTTTGTCAAGTTCATACTTCACTTTGCTTCCCTTTGTGATCTCAACCAC
EY897542       <-- TTTTTGTCAAGTTCATACTTCACTTTGCTTCCCTTTGTGATCTCAACCAC
FD962792       <-- TTTTTGTCAAGTTCATACTTCACTTTGCTTCCCTTTGTGATCTCAACCAC
EX903452       <-- TTTTTGTCAAGTTCATACTTCACTTTGCTTCCCTTTGTGATCTCAACCAC
EX757304       <-- TTTTTGTCAAGTTCATACTTCACTTTGCTTCCCTTTGTGATCTCAACCAC
EX746345       <-- TTTTTGTCAAGTTCATACTTCACTTTGCTTCCCTTTGTGATCTCAACCAC
EX887603       <-- TTTTTGTCAAGTTCATACTTCACTTTGCTTCCCTTTGTGATCTCAACCAC
EX763595       <-- TTTTTGTCAAGTTCATACTTCACTTTGCTTCCCTTTGTGATCTCAACCAC
FD579151       <-- TTTTTGTCAAGTTCATACTTCACTTTGCTTCCCTTTGTGATCTCGACCAC
FD971863       <-- TTTTTGTCAAGTTCATACTTCACTTTGCTTCCCTTTGTGATCTCAACCAC
FD534368       <-- TTTTTGTCAAGTTCATACTTCACTTTGCTTCCCTTTGTGATCTCAACCAC
EY940432       <-- TTTTTGTCAAGTTCATACTTCACTTTGCTTCCCTTTGTGATCTCAACCAC
FD959265       --> ..................................................
EY936190       --> ..................................................
EX907511       --> ..................................................
EX750770       --> ..................................................
EX767650       --> TTTTTGTCAAGTTCATACTTCACTTTGCTTCCCTTTGTGATCTCAACCAC
EX891719       --> ..................................................
FD943165       --> TTTTTGTCAAGTTCATACTTCACTTTGCTTCCCTTTGTGATCTCAACCAC
FD967880       --> TTTTTGTCAAGTTCATACTTCACTTTGCTTCCCTTTGTGATCTCAACCAC
FD530325       --> TTTTTGTCAAGTTCATACTTCACTTTGCTTCCCTTTGTGATCTCAACCAC
EX760925       --> TTTTTGTCAAGTTCATACTTCACTTTGCTTCCCTTTGTGATCT.......

               801    -    851
UN22951        --> CACATTGAAGACCAATGGAGCTTCAGGACCGATCTCAAGGTCGTGCCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755937       <-- ..................................................
FD556559       <-- CACATTGAAGACCAATGGAGCTTCAGGACCGATCTCAAGGTCGTGCCATG
EX765591       <-- CACATTGAAGACCAATGGAGCTTCAGGACCGATCTCAAGGTCGTGCCATG
FD987616       <-- CACATTGAAGACCAATGGAGCTTCAGGACCGATCTCAAGGTCGTGCCATG
EY897542       <-- CACATTGAAGACCAATGGAGCTTCAGGACCGATCTCAAGGTCGTGCCATG
FD962792       <-- CACATTGAAGACCAATGGAGCTTCAGGACCGATCTCAAGGTCGTGCCATG
EX903452       <-- CACATTGAAGACCAATGGAGCTTCAGGACCGATCTCAAGGTCGTGCCATG
EX757304       <-- CACATTGAAGACCAATGGAGCTTCAGGACCGATCTCAAGGTCGTGCCATG
EX746345       <-- CACATTGAAGACCAATGGAGCTTCAGGACCGATCTCAAGGTCGTGCCATG
EX887603       <-- CACATTGAAGACCAATGGAGCTTCAGGACCGATCTCAAAGTCGTGCCATG
EX763595       <-- CACATTGAAGACCAATGGAGCTTCAGGACCGATCTCAAGGTCGTGCCATG
FD579151       <-- CACATTGAAGACCAATGGAGCTTCAGGACCGATCTCAAGGTCGTGCCATG
FD971863       <-- CACATTGAAGACCAATGGAGCTTCAGGACCGATCTCAAGGTCGTGCCATG
FD534368       <-- CACATTGAAGACCAATGGAGCTTCAGGACCGATCTCAAGGTCGTGCCATG
EY940432       <-- CACATTGAAGACCAATGGAGCTTCAGGACCGATCTCAAGGTCGTGCCATG
FD959265       --> ..................................................
EY936190       --> ..................................................
EX907511       --> ..................................................
EX750770       --> ..................................................
EX767650       --> CACATTGAAGACCAATGGAGCT............................
EX891719       --> ..................................................
FD943165       --> CACATTGAAGACCAATG.................................
FD967880       --> CACATTGAAGACCAATGGAGCTTCAG-ACCGATCTCA-GGTCGTGCCATG
FD530325       --> CACATTGAAGACCAATGGAGCTTCAG-ACCGATCTCAAG-TCGTGCCATG
EX760925       --> ..................................................

               851    -    901
UN22951        --> GATGTGCAGCTACAGATCTCTTGGACAGAGTTGAGAGAATCCTCTCGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755937       <-- ..................................................
FD556559       <-- GATGTGCAGCTACAGATCTCTTGGACAGAGTTGAGAGAATCCTCTCGTTG
EX765591       <-- GATGTGCAGCTACAGATCTCTTGGACAGAGTTGA-AGAATCCTCTCGTTG
FD987616       <-- GATGTGCAGCTACAGATCTCTTGGACAGAGTTGAGAGAATCCTCTCGTTG
EY897542       <-- GATGTGCAGCTACAGATCTCTTGGACAGAGTTGAGAGAATCCTCTCGTTG
FD962792       <-- GATGTGCAGCTACAGATCTCTTGGACAGAGTTGAGAGAATCCTCTCGTTG
EX903452       <-- GATGTGCAGCTACAGATCTCTTGGACAGAGTTGAGAGAATCCTCTCGTTG
EX757304       <-- GATGTGCAGCTACAGATCTCTTGGACAGAGTTGAGAGAATCCTCTCGTTG
EX746345       <-- GATGTGCAGCTACAGATCTCTTGGACAGAGTTGAGAGAATCCTCTCGTTG
EX887603       <-- GATGTGCAGCTACAGATCTCTTGGACAGAGT...................
EX763595       <-- GATGTGCAGCTACAGATCTCTTGGACAGAGTTGAGAGAATCCTCTCGTTG
FD579151       <-- GATGTGCAGCTACAGATCTCTTGGACAGAGTTGAGAGAATCCTCTCGTTG
FD971863       <-- GACGTGCAGCTACAGATCTCTTGGACAGAGTTGAGAGAATCCTTTCGTTG
FD534368       <-- GATGTGCAGCTACAGATCTCTTGGACAGAGTTGAGAGAATCCTCTCGTTG
EY940432       <-- GATGTGCAGCTACAGATCTCTTGGACAGAGTTGAGAGAATCCTCTCGTTG
FD959265       --> ..................................................
EY936190       --> ..................................................
EX907511       --> ..................................................
EX750770       --> ..................................................
EX767650       --> ..................................................
EX891719       --> ..................................................
FD943165       --> ..................................................
FD967880       --> GACGTGCAGCTACAGATCTCTTGGACAGAGTTGAGAGA-TCCTTTCGTTG
FD530325       --> GATGTGCAGCTACAGATCTCTTGGACAGAGTTGAGAGA-T-CTCTCGTTG
EX760925       --> ..................................................

               901    -    951
UN22951        --> AGTTTTGGAGCAGGACGAGGAGACCCGTTTGATTCCATCGTTTCTTCATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755937       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556559       <-- AGTTTTGGAGCAGGACGAGGAGACCCGTTTGATTCCATCGTTTCTTCATA  Raphanus raphanistrum subsp. landra
EX765591       <-- AGTTTTGGAGCAGGGCGAGGAGACC-GTTTGATTCCATCGTTTCTTCATA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD987616       <-- AGTTTTGGAGCAGGACGAGGAGACCCGTTTGATTCCATCGTTTCTTCATA  Raphanus raphanistrum subsp. landra
EY897542       <-- AGTTTTGGAGCAGGACGTGGAGACCCGTTTGATTCCATCGTCTCTTCATA  Raphanus raphanistrum subsp. maritimus
FD962792       <-- AGTTTTGGAGCAGGACGTGGAGACCCGTTTGATTCCATCGTCTCTTCATA  Raphanus raphanistrum subsp. maritimus
EX903452       <-- AGTTTTGGAGCAGGACGAGGAGACCCGTTTGATTCCATCGTTTCTTCATA  Raphanus sativus cv Rat-Tail Radish #3870
EX757304       <-- AGTTTTGGAGCAGGACGAGGAGAACCGTTTGATTCCATCGTTTCTTCATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX746345       <-- AGTTTTGGAGCAGGACGTGGAGACCCGTTTGATTCCATCGTCTCTTCATA  Raphanus raphanistrum subsp. maritimus
EX887603       <-- ..................................................  Raphanus sativus var. oleiformis
EX763595       <-- AGTTTTGGAGCAGGACGTGGAGACCCGTTTGATTCCATCGTCTCTTCATA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579151       <-- AGTTTTGGAGCAGGACGAGGAGACCCGTTTGATTCCATCGTTTCTTCATA  Raphanus sativus cv Rat-Tail Radish #3870
FD971863       <-- AGTTTTGGAGCAGGACGAGGAGACCCGTTTGATTCCATCGTTTCTTCATA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD534368       <-- AGTTTTGGAGCAGGGCGTGGAGACCCGTTTGATTCCATCGTCTCTTCATA  Raphanus raphanistrum subsp. maritimus
EY940432       <-- AGTTTTGGAGCAGGACGAGGAGATCCGTTTGATTCCATCGTCTCTTCATA  Raphanus sativus cv Early Scarlet Globe
FD959265       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY936190       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX907511       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX750770       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX767650       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX891719       --> ..................................................  Raphanus sativus var. oleiformis
FD943165       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD967880       --> AGTTT-GGAGC.......................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530325       --> AGTTT-GGAGCAGG....................................  Raphanus raphanistrum subsp. maritimus
EX760925       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               951    -   1001
UN22951        --> TGTTTCTTCGCTCATCTTTGGATCTTTACAAGGGAC-AATAAAACAAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755937       <-- ..................................................
FD556559       <-- TGTTTCTTCGCTCATCTTTGGATCTTTACAAGGGAC-AATAAAACAAATG
EX765591       <-- TGTTTCTTCACTCATCTTTGGATCTTTACAAGGGACCAATAAAACAAATG
FD987616       <-- TGTTTCTTCGCTCATCTTTGGATCTTTACAAGGGAC-AATAAAACAAATG
EY897542       <-- TGTTTCTTCGCTCAACTTTGGATCTTTACAAGGGAC-AATAAAACAAATG
FD962792       <-- TGTTTCTTCGCTCATCTTTGGATCTTTACAAGGGAC-AATAAAACAAATG
EX903452       <-- TGTTTCTTCACTCATCTTTGGATCTTTACAAGGGACCAATAAAACAAATG
EX757304       <-- TGTTTCTTCGCTCATCTTTAGATCTTTACAAGGGAC-AATAAAACAAATG
EX746345       <-- TGTTTCTTCGCTCATCTTTGGATCTTTACAAGGGAC-AATAAAACAAATG
EX887603       <-- ..................................................
EX763595       <-- TGTTTCTTCGCTCATCTTTGGATCTTTA......................
FD579151       <-- TGTTTCTCCACTCATCTTTGGATCTTTACAAGGGACCAATAAAACAAATG
FD971863       <-- TGTTTCTTCGCTCATCTTTGGATCTTTACAAGGGAC-AATAAAACAAATG
FD534368       <-- TGTTTCTTCGCTCATCTTTGGATCTTTACAAGGGAC-AATAAAACAAATG
EY940432       <-- TGTTTCTTCGCTCATCTTTGGATCTTTACAAGGGACCAATAAAACAAATG
FD959265       --> ..................................................
EY936190       --> ..................................................
EX907511       --> ..................................................
EX750770       --> ..................................................
EX767650       --> ..................................................
EX891719       --> ..................................................
FD943165       --> ..................................................
FD967880       --> ..................................................
FD530325       --> ..................................................
EX760925       --> ..................................................

               1001   -   1051
UN22951        --> TGACTTCT....
                   ~~~~~~~~~~~~
EX755937       <-- ............
FD556559       <-- TGACTTCTgccc
EX765591       <-- TAACTTCTgccc
FD987616       <-- TGACTTCTgccc
EY897542       <-- TGACTTCTgccc
FD962792       <-- TGACTTCTgccc
EX903452       <-- TAACTTCTgccc
EX757304       <-- TGACTTCTcc..
EX746345       <-- TGACTTCTgccc
EX887603       <-- ............
EX763595       <-- ............
FD579151       <-- TAACTTCTgccc
FD971863       <-- TGACTTCTgccc
FD534368       <-- TGACTTCTgccc
EY940432       <-- TAACTTCTgccc
FD959265       --> ............
EY936190       --> ............
EX907511       --> ............
EX750770       --> ............
EX767650       --> ............
EX891719       --> ............
FD943165       --> ............
FD967880       --> ............
FD530325       --> ............
EX760925       --> ............