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Alignment for radish unigene UN22972

               1      -     51
UN22972        --> GGAACAACATAAAAGAAACCATCAAAAAGGAGATTTCTCCATCTTAACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891092       <-- ..................................................
FD984917       <-- ..................................................
EW730988       <-- ..................................................
EX758640       <-- ..................................................
EY929060       <-- ..................................................
FD572593       <-- ..................................................
EX892197       <-- ..................................................
FD968320       <-- ..................................................
EY894610       <-- ..................................................
FD550557       <-- ..................................................
EX754281       --> GGAACAACATAAAAGAAACCATCAAAAAGGAGATTTCTCCATCTTAACCT
FD556452       --> GGAACAACATAAAAGAAACCATCAAAAAGGAGATTTCTCCATCTTAACCT
EW715937       --> ...ggAACATAAAAGAAACCATCAAAAAGGAGATTTCTCCATCTTAACCT
EY916524       --> ...ggAACATAAAAGAAACCATCAAAAAGGAGATTTCTCCATCTTAACAT
FD981161       --> ...ggAACATAAAAGAAACCATCAAAAAGGAGATTTCTCCATCTTAACAT
FY430141       --> .......CATAAAAGAAACCATCAAAAAGGAGATTTCTCCATCTTAACCT
FD972425       --> ......ggATAAAAGAAACCATCAAAAAGGAGATTTCTCCATCTTAACCT
FY448874       --> ...................................TCTCCATCTTAACCT
FY451091       --> ................................................CT
EX754163       --> ..................................................
FD546498       --> ..................................................

               51     -    101
UN22972        --> CTTCCTTTATTCCGTTCACGGCTACGTTCTTATCTACTCACAAGAACCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891092       <-- ..................................................
FD984917       <-- ..................................................
EW730988       <-- ..................................................
EX758640       <-- ..................................................
EY929060       <-- ..................................................
FD572593       <-- ..................................................
EX892197       <-- ..................................................
FD968320       <-- ..................................................
EY894610       <-- ..................................................
FD550557       <-- ..................................................
EX754281       --> CTTCCTTTATTCCGTTCACGGCTACGTTCTTATCTACTCACAAGAACCCC
FD556452       --> CTTCCTTTATTCCACTCACGGCTACGTTCTTATCTACTCACAAGAACCTC
EW715937       --> CTTCCTTTATTCCGTTCACGGCTACGTTCTTATCTACTCACAAGAACCCC
EY916524       --> CTTCCTTTATTCCGTTCACGGCTACGTTCTTATCTACTCACAAGAACCCC
FD981161       --> CTTCCTTTATTCCGTTCACGGCTACGTTCTTATCTACTCACAAGAACCCC
FY430141       --> CTTCCTTTATTCCGTTCACGGCTACGTTCTTATCTACTCACAAGAACCCC
FD972425       --> CTTCCTTTATTCCGTTCACGGCTACGTTCTTATCTACTCACAAGAACCCC
FY448874       --> CTTCCTTTATTCCGTTCACGGCTACGTTCTTATCTACTCACAAGAACCCC
FY451091       --> CTTCCTTTATTCCGTTCACGGCTACGTTCTTATCTACTCACAAGAACCCC
EX754163       --> ..................................................
FD546498       --> ..................................................

               101    -    151
UN22972        --> AACAGATCAATAAAAAGACTCTTACTTTCCCTCTCTC------CCCTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891092       <-- ..................................................
FD984917       <-- ..................................................
EW730988       <-- ..................................................
EX758640       <-- ..................................................
EY929060       <-- ..................................................
FD572593       <-- ..................................................
EX892197       <-- ..................................................
FD968320       <-- ..................................................
EY894610       <-- ..................................................
FD550557       <-- ..................................................
EX754281       --> AACAGATCAATAAAAAGACTCTTACTTTCCCTCTCTC------CCCTTGC
FD556452       --> AACAGATCAATAAAAAGACTCTTACTTTCCCTCTCTCTCTCTCCCCTTGC
EW715937       --> AACAGATCAATAAAAAGACTCTTACTTTCCCTCTCTC------CCCTTGC
EY916524       --> AACAGATCAATAAAAAGACTCTTACTTTCCCTCTCTC------CCCTTGC
FD981161       --> AACAGATCAATAAAAAGACTCTTACTTTCCCTCTCTC------CCCTTGC
FY430141       --> AACAGATCAATAAAAAGACTCTTACTTTCCCTCTCTC------CCCTTGC
FD972425       --> AACAGATCAATAAAAAGACTCTTACTTTCCCTCTCTC------CCCTTGC
FY448874       --> AACAGATCAATAAAAAGACTCTTACTTTCCCTCTCTC------CCCTTGC
FY451091       --> AACAGATCAATAAAAAGACTCTTACTTTCCCTCTCTC------CCCTTGC
EX754163       --> ..................................................
FD546498       --> ..................................................

               151    -    201
UN22972        --> TGAAAAAGATCAATGGGTTCTTCTGCGGAGCAGTGCATTTTGGTGACTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891092       <-- ..................................................  Raphanus sativus var. oleiformis
FD984917       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW730988       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX758640       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY929060       <-- ..................................................  Raphanus sativus var. oleiformis
FD572593       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX892197       <-- ..................................................  Raphanus sativus var. oleiformis
FD968320       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY894610       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD550557       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX754281       --> TGAAAAAGATCAATGGGTTCTTCTGCGGAGCAGTGCATTTTGGTGACTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556452       --> TGAAAAAGATCAATGGGTTCTTCTGCGGAGCAGTGCATTTTGGTGACTGG  Raphanus raphanistrum subsp. landra
EW715937       --> TGAAAAAGATCGATGGGTTCTTCTGCGGAGCAGTGCATTTTGGTGACTGG  Raphanus sativus var. oleiformis
EY916524       --> TGAAAAAGATCAATGGGTTCTTCTGCGGAGCAGTGCATTTTGGTGACTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981161       --> TGAAAAAGATCAATGGGTTCTTCTGCGGAGCAGTGCATTTTGGTGACTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY430141       --> TGAAAAAGATCGATGGGTTCTTCTGCGGAGCAGTGCATTTTGGTGACTGG  Raphanus sativus cv GSK3-1
FD972425       --> TGAAAAAGATCAATGGGTTCTTCTGCGGAGCAGTGCATTTTGGTGACTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY448874       --> TGAAAAAGATCGATGGGTTCTTCTGCGGAGCAGTGCATTTTGGTGACTGG  Raphanus sativus cv GSK3-1
FY451091       --> TGAAAAAGATCGATGGGTTCTTCTGCGGAGCAGTGCATTTTGGTGACTGG  Raphanus sativus cv GSK3-1
EX754163       --> ......gGATCAATGGGTTCTTCTGCGGAGCAGTGCATTTTGGTGACTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD546498       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               201    -    251
UN22972        --> TGGTGCTGGGTTCATTGGGACGCACACTGTTGTTCAGCTTTTGAATCAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891092       <-- ..................................................
FD984917       <-- ..................................................
EW730988       <-- ..................................................
EX758640       <-- ..................................................
EY929060       <-- ..................................................
FD572593       <-- ..................................................
EX892197       <-- ..................................................
FD968320       <-- ..................................................
EY894610       <-- ..................................................
FD550557       <-- ..................................................
EX754281       --> TGGTGCTGGGTTCATTGGGACGCACACTGTCGTTCAGCTTTTGAATCAGG
FD556452       --> TGGTGCTGGGTTCATTGGGACGCACACTGTTGTTCAGCTTTTGAATCAGG
EW715937       --> TGGTGCTGGGTTCATTGGGACGCACACTGTTGTTCAGCTTTTGAATCAGG
EY916524       --> TGGTGCTGGGTTCATTGGGACGCACACTGTTGTTCAGCTTTTGAATCAGG
FD981161       --> TGGTGCTGGGTTCATTGGGACGCACACTGTTGTTCAGCTTTTGAATCAGG
FY430141       --> TGGTGCTGGGTTCATTGGGACGCACACTGTTGTTCAGCTTTTGAATCAGG
FD972425       --> TGGTGCTGGGTTCATTGGGACGCACACTGTTGTTCAGCTTTTGAATCAGG
FY448874       --> TGGTGCTGGGTTCATTGGGACGCACACTGTTGTTCAGCTTTTGAATCAGG
FY451091       --> TGGTGCTGGGTTCATTGGGACGCACACTGTTGTTCAGCTTTTGAATCAGG
EX754163       --> TGGTGCTGGGTTCATTGGGACGCACACTGTTGTTCAGCTTTTGAATCAGG
FD546498       --> ..................................................

               251    -    301
UN22972        --> GCTTCAAGGTTTCCATCATCGACAATCTTGATAACTCTGTCCTTGAAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891092       <-- ..................................................
FD984917       <-- ..................................................
EW730988       <-- ..................................................
EX758640       <-- ..................................................
EY929060       <-- ..................................................
FD572593       <-- ..................................................
EX892197       <-- ..................................................
FD968320       <-- ..................................................
EY894610       <-- ..................................................
FD550557       <-- ..................................................
EX754281       --> GCTTCAAGGTTTCCATCATCGACAATCTTGATAACTCTGTCCTTGAAGCT
FD556452       --> GCTTCAAGGTTTCCATCATCGACAATCTTGATAACTCTGTCCTTGAAGCT
EW715937       --> GCTTCAAGGTTTCCGTCATCGACAATCTTGATAACTCTGTCCTTGAAGCT
EY916524       --> GCTTCAAGGTTTCCATCATCGACAATCTTGATAACTCTGTCCTTGAAGCT
FD981161       --> GCTTCAAGGTTTCCATCATCGACAATCTTGATAACTCTGTCCTTGAAGCT
FY430141       --> GC................................................
FD972425       --> GCTTCAAGGTTTCCATCATCGACAATCTTGATAACTCTGTCCTTGAAGCT
FY448874       --> GCTTCAAGGTTTCCGTCATCGACAATCTTGATAACTCTGTCCTTGAAGCT
FY451091       --> GCTTCAAGGTTTCCGTCATCGACAATCTTGATAACTCTGTCCTTGAAGCT
EX754163       --> GCTTCAAGGTTTCCATCATCGACAATCTTGATAACTCTGTCCTTGAAGCT
FD546498       --> ..................................................

               301    -    351
UN22972        --> GTTCATAGGGTTCGTGAGCTTGTTGGTCCTGATCTCTCTTCCAAGCTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891092       <-- ..................................................
FD984917       <-- ..................................................
EW730988       <-- ..................................................
EX758640       <-- ..................................................
EY929060       <-- ..................................................
FD572593       <-- ..................................................
EX892197       <-- ..................................................
FD968320       <-- ..................................................
EY894610       <-- ..................................................
FD550557       <-- ..................................................
EX754281       --> GTCCATAGGGTTCGTGAGCTTGTTGGTCCTGATCTCTCTTCCAAGCTTGA
FD556452       --> GTTCACAGGGTTCGTGAGCTTGTTGGTCCTGATCTCTCTTCCAAGCTTGA
EW715937       --> GTTCATAGGGTTCGTGAGCTTGTTGGTCCTGGTCTCTCTTCCAAGCTTGA
EY916524       --> GTTCATAGGGTTCGTGAGCTTGTTGGTCCTGATCTCTCTTCCAAGCTTGA
FD981161       --> GTTCATAGGGTTCGTGAGCTTGTTGGTCCTGATCTCTCTTCCAAGCTTGA
FY430141       --> ..................................................
FD972425       --> GTCCATAGGGTTCGTGAGCTTGTTGGTCCTGATCTCTCTTCCAAGCTTGA
FY448874       --> GTTCATAGGGTTCGTGAGCTTGTTGGTCCTGATCTCTCTTCCAAGCTTGA
FY451091       --> GTTCATAGGGTTCGTGAGCTTGTTGGTCCTGATCTCTCTTCCAAGCTTGA
EX754163       --> GTCCATAGGGTTCGTGAGCTTGTTGGTCCTGATCTCTCTTCCAAGCTTGA
FD546498       --> ..................................................

               351    -    401
UN22972        --> ATTCCATCTGGGTGATTTGAGAAACAAAGGAGACATTGAGAAACTCTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891092       <-- ..................................................
FD984917       <-- ..................................................
EW730988       <-- ..................................................
EX758640       <-- ..................................................
EY929060       <-- ..................................................
FD572593       <-- ..................................................
EX892197       <-- ..................................................
FD968320       <-- ..................................................
EY894610       <-- ..................................................
FD550557       <-- ..................................................
EX754281       --> ATTCCATCTGGGTGATTTG-GAAACAAAGGAGACATTGAGAAACTCTTTT
FD556452       --> ATTCCATCTGGGTGATTTGAGAAACAAAGGAGACATTGAGAAACTCTTTT
EW715937       --> ATTCCATCTGGGTGATTTGAGAAACAAAGGAGACATTGAGAAACTCTTTT
EY916524       --> ATTCCATCTGGGTGATTTGAGAAACAAAGGAGACATTGAGAAACTCTTTT
FD981161       --> ATTCCATCTGGGTGATTTGAGAAACAAAGGAGACATTGAGAAACTCTTTT
FY430141       --> ..................................................
FD972425       --> ATTCCATCTGGGTGATTTGAGAAACAAAGGAGACATTGAGAAACTCTTTT
FY448874       --> ATTCCATCTGGGTGATTTGAGAAACAAAGGAGACATTGAGAAACTCTTCT
FY451091       --> ATTCCATCTGGGTGATTTGAGAAACAAAGGAGACATTGAGAAACTCTTCT
EX754163       --> ATTCCATCTGGGTGATTTGAGAAACAAAGGAGACATTGAGAAACTCTTTT
FD546498       --> ..................................................

               401    -    451
UN22972        --> CCAATCAGAGATTTGATGCTGTGATTCACTTTGCTGGTCTTAAAGCTGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891092       <-- ..................................................
FD984917       <-- ..................................................
EW730988       <-- ..................................................
EX758640       <-- ..................................................
EY929060       <-- ..................................................
FD572593       <-- ..................................................
EX892197       <-- ..................................................
FD968320       <-- ..................................................
EY894610       <-- ..................................................
FD550557       <-- ..................................................
EX754281       --> CCAATCAGAGATTCGATGCTGTGATTCACTTTGCTGGTCTTAAAGCTGTG
FD556452       --> CCAATCAGAGATTTGATGCTGTGATTCACTTTGCTGGTCTTAAAGCTGTG
EW715937       --> CCAATCAGAGATTTGATGCGGTGATTCACTTTGCTGGTCTTAAAGCTGTG
EY916524       --> CCAATCAGAGATTTGATGCTGTGATTCACTTTGCTGGTCTTAAAGCTGTG
FD981161       --> CCAATCAGAGATTTGATGCTGTGATTCACTTTGCTGGTCTTAAAGCTGTG
FY430141       --> ..................................................
FD972425       --> CCAATCAGAGATTCGATGCTGTGATTCACTTTGCTGGTCTTAAAGCTGTG
FY448874       --> CCAATCAGAGATTTGATGCTGTGATTCACTTTGCTGGTCTTAAAGCTGTG
FY451091       --> CCAATCAGAGATTTGATGCTGTGATTCACTTTGCTGGTCTTAAAGCTGTG
EX754163       --> CCAATCAGAGATTCGATGCTGTGATTCACTTTGCTGGTCTTAAAGCTGTG
FD546498       --> ..................................................

               451    -    501
UN22972        --> GGTGAAAGTGTAGCAAACCCTCGTCGTTACTTTGACAACAACTTAGTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891092       <-- .......................TCGTTACTTTGACAACAACTTAGTTGG  Raphanus sativus var. oleiformis
FD984917       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW730988       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX758640       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY929060       <-- ..................................................  Raphanus sativus var. oleiformis
FD572593       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX892197       <-- ..................................................  Raphanus sativus var. oleiformis
FD968320       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY894610       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD550557       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX754281       --> GGTGAAAGTGTAGCAAACCCTCGTCGTTACTTTGACAACAACTTAGTTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556452       --> GGTGAAAGTGTAGCAAACCCTCGTCGTTACTTTGACAACAACTTAGTTGG  Raphanus raphanistrum subsp. landra
EW715937       --> GGTGAAAGTGTTGCAAACCCTCGTCGTTACTTTGACAACAACTTAGTTGG  Raphanus sativus var. oleiformis
EY916524       --> GGTGAAAGTGTTGCAAACCCTCGTCGTTACTTTGACAACAACTTAGTTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981161       --> GGTGAAAGTGTTGCAAACCCTCGTCGTTACTTTGACAACAACTTAGTTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY430141       --> ..................................................  Raphanus sativus cv GSK3-1
FD972425       --> GGTGAAAGTGTAGCAAACCCTCGTCGTTACTTTGACAACAACTTAGTTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY448874       --> GGTGAAAGTGTCGCAAACCCTCGTCGTTACTTTGACAACAACTTAGTTGG  Raphanus sativus cv GSK3-1
FY451091       --> GGTGAAAGTGTCGCAAACCCTCGTCGTTACTTTGACAACAACTTAGTTGG  Raphanus sativus cv GSK3-1
EX754163       --> GGTGAAAGTGTAGCAAACCCTCGTCGTTACTTTGACAACAACTTAGTTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD546498       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               501    -    551
UN22972        --> GACTATCAATCTCTATGAGACAATGGCAAAGTACAACTGCAAAATGATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891092       <-- GACTATCAATCTCTATGAGACAATGGCAAAGTACAACTGCAAAATGATGG
FD984917       <-- .................................CAACTGCAAAATGATGG
EW730988       <-- ..................................................
EX758640       <-- ..................................................
EY929060       <-- ..................................................
FD572593       <-- ..................................................
EX892197       <-- ..................................................
FD968320       <-- ..................................................
EY894610       <-- ..................................................
FD550557       <-- ..................................................
EX754281       --> GACTATCAATCTCTATGAGACAATGGCAAAGTACAACTGCAAAATGATGG
FD556452       --> GACTATCAATCTCTATGAGACAATGGCAAAGTACAACTGCAAAATGATGG
EW715937       --> GACTATCAATCTCTATGAGGCAATGGCAAAGTACAACTGCAAAATGATGG
EY916524       --> GACTATCAATCTCTATGAGACAATGGCAAAGTACAACTGCAAAATGATGG
FD981161       --> GACTATCAATCTCTATGAGACAATGGCAAAGTACAACTGCAAAATGATGG
FY430141       --> ..................................................
FD972425       --> AACTATCAATCTCTATGAGACAATGGCAAAGTACAACTGCAAAATGATGG
FY448874       --> GACTATCAATCTCTATGAGACAATGGCAAAGTACAACTGCAAAATGATGG
FY451091       --> GACTATCAATCTCTATGAGACAATGGCAAAGTACAACTGCAAAATGATGG
EX754163       --> AACTATCAATCTCTATGAGACAATGGCAAAGTACAACTGCAAAATGATGG
FD546498       --> ..................................................

               551    -    601
UN22972        --> TGTTTTCTTCGTCGGCAACAGTTTATGGCCAACCAGAGATAGTCCCTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891092       <-- TGTTTTCTTCGTCGGCAACAGTTTATGGCCAACCAGAGATAGTCCCTTGT  Raphanus sativus var. oleiformis
FD984917       <-- TGTTTTCTTCGTCGGCAACAGTTTATGGCCAACCAGAGATAGTCCCATGT  Raphanus raphanistrum subsp. landra
EW730988       <-- .................................................T  Raphanus sativus cv Early Scarlet Globe
EX758640       <-- .................................................T  Raphanus raphanistrum subsp. raphanistrum (MS)
EY929060       <-- ..................................................  Raphanus sativus var. oleiformis
FD572593       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX892197       <-- ..................................................  Raphanus sativus var. oleiformis
FD968320       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY894610       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD550557       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX754281       --> TGTTTTCTTCGTCGGCAACAGTTTATGGCCAACCAGAGATAGTCCCTTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556452       --> TGTTTTCTTCGTCGGCAACAGTTTATGGCCAACCAGAGATAGTCCCTTGC  Raphanus raphanistrum subsp. landra
EW715937       --> TGTTTTCTTCGTCGGCAACAGTTTATGGCCAACCAGAGATAGTCCCATGT  Raphanus sativus var. oleiformis
EY916524       --> TGTTTTCTTCGTCGGCAACAGTTTATGGCCAACCAGAGATAGTCCCTTGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981161       --> TGTTTTCTTCGTCGGCAACAGTTTATGGCCAACCAGAGATAGTCCCTTGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY430141       --> ..................................................  Raphanus sativus cv GSK3-1
FD972425       --> TGTTTTCTTCGTCGGCAACAGTTTATGGCCAACCAGAGATAGTCCCTTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY448874       --> TGTTTTCTTCGTCGGCAACAGTTTATGGCCAACCAGAGATAGTCCCATGT  Raphanus sativus cv GSK3-1
FY451091       --> TGTTTTCTTCGTCGGCAACAGTTTATGGCCAACCAGAGATAGTCCCATGT  Raphanus sativus cv GSK3-1
EX754163       --> TGTTTTCTTCGTCGGCAACAGTTTATGGCCAACCAGAGATAGTCCCTTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD546498       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               601    -    651
UN22972        --> GTGGAAGACTTTGAGTTACAGGCTATGAATCCTTACGGTCGCACCAAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891092       <-- GTGGAAGACTTTGAGTTACAGGCTATGAATCCTTACGGTCGCACCAAGCT
FD984917       <-- GTGGAAGACTTTGAGTTACAGGCTATGAATCCTTACGGTCGCACCAAGCT
EW730988       <-- GTGGAAGACTTTGAGTTACAGGCTATGAATCCTTACGGTCGCACCAAGCT
EX758640       <-- GTGGAAGACTTTGAGTTACAGGCTATGAATCTTTACGGTCGCACCAAGCT
EY929060       <-- ...................................CGGTCGCACCAAGCT
FD572593       <-- ..................................................
EX892197       <-- ..................................................
FD968320       <-- ..................................................
EY894610       <-- ..................................................
FD550557       <-- ..................................................
EX754281       --> GTGGAAGACTTTGAGTTACAGGCTATGAATCCTTACG-TCGCACCAAGCT
FD556452       --> GTGGAAGACTTTGAGTTACAGGCTATGAATCCTTACGGTCGCACCAAGCT
EW715937       --> GTGGAAGACTTTGAGTTACAGGCTATGAATCCTTACGGTCGCACCAAGCT
EY916524       --> GTGGAAGACTTTGAGTTACAG-CTATGA......................
FD981161       --> GTGGAAGACTTTGAGTTACAGGCTATGAATCCTTACGGTCGCACCAAGCT
FY430141       --> ..................................................
FD972425       --> GTGGAAGACTTTGAGTTACAG-CTATGAATCCTTACG-TCGCACCAAGCT
FY448874       --> GTGGAAGACTTTGAGTTACAGGCTATGAATCCTTACGGTCGCACCAAGCT
FY451091       --> GTGGAAGACTTTGAGTTACAGGCTATGAATCCTTACGGTCGCACCAAGCT
EX754163       --> GTGGAAGACTTTGAGTTACAGGCTATGAATCCTTACGGTCGCACCAAGCT
FD546498       --> ..................................................

               651    -    701
UN22972        --> GTATCTTGAAGAGATAGCTAGAGACATTCACGCGGCAGAGCCAGAGTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891092       <-- GTATCTTGGAGAGATAGCTAGGGACATCCACGCGGCAGAGCCAGAGTGGA
FD984917       <-- GTATCTTGAAGAGATAGCTAGAGACATTCACGCGGCAGAGCCAGAGTGGA
EW730988       <-- GTATCTTGAAGAGATAGCTAGAGACATCCACGCGGCAGAGCCAGAGTGGA
EX758640       <-- GTATCTTGAAGAGATAGCTAGAGACATTCACGCGGCAGAGCCAGAGTGGA
EY929060       <-- GTATCTTGAAGAGATAGCTAGAGACATCCACGCGGCAGAGCCAGAGTGGA
FD572593       <-- ..............tatCTAGAGACATTCACGCGGCAGAGCCAGAGTGGA
EX892197       <-- ..................................................
FD968320       <-- ..................................................
EY894610       <-- ..................................................
FD550557       <-- ..................................................
EX754281       --> GTATCTTGAAGAGATAGCTAGAGACAT-CACGCGGCAGAGCCAGAGTGGA
FD556452       --> GTTTCTTGAAGAGATAGCTAGAGACATTCACGCGGCAGA...........
EW715937       --> GTTTCTTGAAGAGATAGCTAGAGACATTCACGCGGCAGAGCCAGAGTGGA
EY916524       --> ..................................................
FD981161       --> GTATCTCGAAGAGATAGCTAGAGACATCCACGCGGCAGAGCCAGAGTGGA
FY430141       --> ..................................................
FD972425       --> GTATCTTGAAGAGATAGCTAGAGACATTCACGCG................
FY448874       --> GTATCTTGAAGAGATAGCTAGAGACATTCACGCGGCTGAGCCAGAGTGGA
FY451091       --> GTATCTTGAAGAGATAGCTAGAGACATTCACGCGGCTGAGCCAGAGTGGA
EX754163       --> GTATCTTGAAGAGATAGCTAGAGACATTCACGCGGCAGAGCCAGAGTGGA
FD546498       --> ..................................................

               701    -    751
UN22972        --> GGATAATTCTTCTGAGGTACTTCAATCCAGTTGGAGCTCACGAGAGCGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891092       <-- GGATAATTCTTCTGAGGTACTTCAATCCAGTTGGAGCTCACGAGAGCGGG  Raphanus sativus var. oleiformis
FD984917       <-- GGATAATTCTTCTGAGGTACTTCAATCCTGTTGGAGCTCACGAGAGCGGG  Raphanus raphanistrum subsp. landra
EW730988       <-- GGATAATTCTTCTGAGGTACTTCAATCCAGTTGGAGCTCACGAGAGCGGG  Raphanus sativus cv Early Scarlet Globe
EX758640       <-- GGATAATTCTTCTGAGGTACTTCAATCCAGTCGGAGCTCACGAGAGCGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY929060       <-- GGATAATTCTTCTGAGGTACTTCAATCCAGTTGGAGCTCACGAGAGCGGG  Raphanus sativus var. oleiformis
FD572593       <-- GGATAATTCTTCTGAGGTACTTCAATCCTGTTGGAGCTCACGAGAGCGGA  Raphanus sativus cv Early Scarlet Globe
EX892197       <-- .............GAGGTACTTCAATCCAGTTGGAGCTCACGAGAGCGGG  Raphanus sativus var. oleiformis
FD968320       <-- ...............GGTACTTCAATCCAGTCGGAGCTCACGAGAGCGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY894610       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD550557       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX754281       --> GGATA-TTCTTCTGAG-TACTTCAATCCAGT...................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556452       --> ..................................................  Raphanus raphanistrum subsp. landra
EW715937       --> GGATAATTCTTCTGAGGTACTTCAATCCTGTTGGAGCTCACGAGAG....  Raphanus sativus var. oleiformis
EY916524       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981161       --> GGATAATTCTTCTGAG-TACTTCAATCCAGTTGGAGCTCACGAGAGCGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY430141       --> ..................................................  Raphanus sativus cv GSK3-1
FD972425       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY448874       --> GGATAATTCTTCTGAGGTACTTCAATCCTGTTGGAGCTCACGAGAGCGGa  Raphanus sativus cv GSK3-1
FY451091       --> GGATAATTCTTCTGAGGTACTTCAATCCTGTTGGAGCTCACGAGAGCGGA  Raphanus sativus cv GSK3-1
EX754163       --> GGATAATTCTTCTGAGGTACTTCAATCCAGTCGGAGCTCACGAGAGCGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD546498       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               751    -    801
UN22972        --> AGGATCGGAGAAGATCCAAAGGGCATACCGAACAATCTCATGCCTTATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891092       <-- AGGATCGGAGAAGATCCAAAGGGCATACCGAACAATCTCATGCCTTATAT
FD984917       <-- AGGATCGGAGAAGATCCAAAGGGCATACCGAACAATCTCATGCCTTATAT
EW730988       <-- AGGATCGGAGAAGATCCAAAGGGCATACCGAACAATTTCATGCCTTATAT
EX758640       <-- AGGATTGGAGAAGATCCAAAGGGCATACCGAACAATCTCATGCCTTATAT
EY929060       <-- AGGATCGGAGAAGATCCAAAGGGCATACCGAACAATCTCATGCCTTATAT
FD572593       <-- AGGATCGGAGAAGATCCAAAGGGCATACCGAACAATCTCATGCCTTATAT
EX892197       <-- AGGATCGGAGAAGATCCAAAGGGCATACCGAACAATCTCATGCCTTATAT
FD968320       <-- AGGATTGGAAAAGATCCAAAGGGCATACCGAACAATCTCATGCCTTATAT
EY894610       <-- ..................................................
FD550557       <-- ..................................................
EX754281       --> ..................................................
FD556452       --> ..................................................
EW715937       --> ..................................................
EY916524       --> ..................................................
FD981161       --> AGGATCGG..........................................
FY430141       --> ..................................................
FD972425       --> ..................................................
FY448874       --> ..................................................
FY451091       --> AGGATCGGAGAAGATCCAAAGGGCATACCGAACAATCTCATGCCTTATAT
EX754163       --> AGGATTGGAGAAGATCCAAAGGGCATACCGAACAATCTCATGCCTTATAT
FD546498       --> ..................................................

               801    -    851
UN22972        --> CCAGCAAGTTGCGGTTGGAAGGTTACCTGAGCTCAATGTATTTGGACATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891092       <-- CCAGCAAGTTGCGGTTGGAAGGTTACCTGAGCTCAATGTATTCGGACATG
FD984917       <-- CCAGCAAGTTGCGGTTGGAAGGTTACCTGAGCTCAATGTGTTTGGACATG
EW730988       <-- CCAGCAAGTTGCGGTTGGAAGGTTACCTGAGCTCAATGTATTTGGACATG
EX758640       <-- CCAGCAAGTTGCGGTTGGAAGGTTACCTGAGCTCAATGTATTTGGACATG
EY929060       <-- CCAGCAAGTTGCGGTTGGAAGGTTACCTGAGCTCAATGTATTTGGACATG
FD572593       <-- CCAGCAAGTTGCGGTTGGAAGGTTACCTGAGCTCAATGTATTTGGACATG
EX892197       <-- CCAGCAAGTTGCGGTTGGAAGGTTACCTGAGCTCAATGTATTTGGACATG
FD968320       <-- CCAGCAAGTTGCGGTTGGAAGGTTACCTGAGCTCAATGTATTTGGACATG
EY894610       <-- ..................................................
FD550557       <-- ..................................................
EX754281       --> ..................................................
FD556452       --> ..................................................
EW715937       --> ..................................................
EY916524       --> ..................................................
FD981161       --> ..................................................
FY430141       --> ..................................................
FD972425       --> ..................................................
FY448874       --> ..................................................
FY451091       --> CCAGCAAGTTGCGGTTGGGAGATTACCTGAGCTCAATGTGTTTGGACATG
EX754163       --> CCAGCAAGTTGCGGTTGGAAG-TTACCTGAGCTCAATGTATTTGGACATG
FD546498       --> ..................................................

               851    -    901
UN22972        --> ACTATCCTACACCGGATGGTAGCGCGGTCAGAGACTATATCCATGTAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891092       <-- ACTATCCTACACCGGATGGTAGCGCGGTCAGAGACTATATCCATGTAATG  Raphanus sativus var. oleiformis
FD984917       <-- ACTATCCTACACCGGATGGTAGCGCGGTCAGAGACTATATCCATGTAATG  Raphanus raphanistrum subsp. landra
EW730988       <-- ACTATCCTACACTGGATGGTAGCGCGGTCAGAGACTATATCCATGTAATG  Raphanus sativus cv Early Scarlet Globe
EX758640       <-- ACTATCCTACACCGGATGGTAGCGCGGTCAGAGACTATATCCATGTGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY929060       <-- ACTATCCTACACCGGATGGTAGCGCGGTCAGAGACTATATCCATGTAATG  Raphanus sativus var. oleiformis
FD572593       <-- ACTATCCTACACCGGATGGTAGCGCGGTCAGAGACTATATCCATGTAATG  Raphanus sativus cv Early Scarlet Globe
EX892197       <-- ACTATCCTACACCGGATGGTAGCGCGGTCAGAGACTATATCCATGTAATG  Raphanus sativus var. oleiformis
FD968320       <-- ACTATCCTACACCGGATGGTAGCGCGGTCAGAGACTATGTCCATGTGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY894610       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD550557       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX754281       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556452       --> ..................................................  Raphanus raphanistrum subsp. landra
EW715937       --> ..................................................  Raphanus sativus var. oleiformis
EY916524       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981161       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY430141       --> ..................................................  Raphanus sativus cv GSK3-1
FD972425       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY448874       --> ..................................................  Raphanus sativus cv GSK3-1
FY451091       --> ACTATCCTACACAGGATGGTAGCGCGGTCAGAGACTATATCCATGTGATG  Raphanus sativus cv GSK3-1
EX754163       --> ACTATCCTACACCGGATGGTAGCGCGGTCAGAGACTATATCCATGTGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD546498       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               901    -    951
UN22972        --> GATTTAGCAGATGGACATGTCGCTGCGCTGAACAAGCTGTTTAATGATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891092       <-- GATTTAGCAGATGGACATGTCGCTGCGCTGAACAAGCTGTTTAATGATCC
FD984917       <-- GATTTAGCAGATGGACATGTCGCTGCGCTGAACAAGCTGTTCAATGATCC
EW730988       <-- GATTTAGCAGATGGACATGTCGCTGCGCTGAACAAGCTGTTTAATGATCC
EX758640       <-- GATTTAGCAGATGGACATGTCGCTGCGCTGAACAAGCTGTTTAATGATCC
EY929060       <-- GATTTAGCAGATGGACATGTCGCTGCGCCGAACAAGCTGTTTAATGATCC
FD572593       <-- GATTTAGCAGATGGACATGTGGCTGCGCTGAACAAGCTGTTTAATGATCC
EX892197       <-- GATTTAGCAGATGGACATGTCGCTGCGCTGAACAAGCTGTTTAATGATCC
FD968320       <-- GATTTAGCAGATGGACATGTCGCTGCGCTGAACAAGCTGTTTAATGATCC
EY894610       <-- ..................................................
FD550557       <-- ..................................................
EX754281       --> ..................................................
FD556452       --> ..................................................
EW715937       --> ..................................................
EY916524       --> ..................................................
FD981161       --> ..................................................
FY430141       --> ..................................................
FD972425       --> ..................................................
FY448874       --> ..................................................
FY451091       --> GATTTAGCAGATGGACATGTCGCTG.........................
EX754163       --> GATTTAGCAGATGGACATGT..............................
FD546498       --> ..................................................

               951    -   1001
UN22972        --> AAAGATTGGTTGTACTGCTTATAATCTTGGGACTGGTCAAGGAACTTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891092       <-- AAAGATTGGTTGTACTGCTTATAATCTTGGGACTGGTCAAGGAACTTCTG
FD984917       <-- AAAGATTGGTTGTACTGCTTATAATCTTGGGACTGGTCAAGGAACTTCTG
EW730988       <-- AAAGATTGGTTGTACTGCTTATAATCTTGGGACTGGTCAAGGAACTTCTG
EX758640       <-- AGAGATTGGTTGTACTGCTTATAATCTTGGGACTGGTCAAGGAACTTCTG
EY929060       <-- AAAGATTGGTTGTACTGCTTATAATCTTGGGACTGGTCAAGGAACTTCTG
FD572593       <-- AAAGATTGGTTGTACTGCTTATAATCTTGGGACTGGTCAAGGAACTTCTG
EX892197       <-- AAAGATTGGTTGTACTGCTTATAATCTTGGGACTGGTCAAGGAACTTCTG
FD968320       <-- AAAGATTGGTTGTACTGCTTATAATCTTGGGACTGGTCAAGGAACTTCTG
EY894610       <-- ..................................................
FD550557       <-- ..................................................
EX754281       --> ..................................................
FD556452       --> ..................................................
EW715937       --> ..................................................
EY916524       --> ..................................................
FD981161       --> ..................................................
FY430141       --> ..................................................
FD972425       --> ..................................................
FY448874       --> ..................................................
FY451091       --> ..................................................
EX754163       --> ..................................................
FD546498       --> ..................................................

               1001   -   1051
UN22972        --> TCTTGGAAATGGTTTCTGCTTTCGAAAAAGCTTCTGGCAAGAAAATCCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891092       <-- TCTTGGAAATGGTTTCTGCTTTCGAAAAAGCTTCTGGCAAGAAAATCCCA
FD984917       <-- TCTTGGAAATGGTTTCTGCTTTCGAAAAAGCTTCTGGCAAGAAAATCCCA
EW730988       <-- TCTTGGAAATGGTTTCTGCTTTCGAAAAAGCTTCTGGCAAGAAAATCCCA
EX758640       <-- TCTTGGAAATGGTTTCTGCTTTCGAAAAAGCTTCTGGCAAGAAAATCCCA
EY929060       <-- TCTTGGAAATGGTTTCTGCTTTCGAAAAAGCTTCTGGCAAGAAAATCCCA
FD572593       <-- TCTTGGAAATAGTTTCTTCTTTCGAAAAAGCTTCTGGCAAGAAAATCCCA
EX892197       <-- TCTTGGAAATGGTTTCTGCTTTCGAAAAAGCTTCTGGCAAGAAAATCCCA
FD968320       <-- TCTTGGAAATGGTTTCTGCTTTCGAAAAAGCTTCTGGCAAGAAAATCCCA
EY894610       <-- ............TTTCTGCTTTCGAAAAAGCTTCTGGCAAGAAAATCCCA
FD550557       <-- ..................................................
EX754281       --> ..................................................
FD556452       --> ..................................................
EW715937       --> ..................................................
EY916524       --> ..................................................
FD981161       --> ..................................................
FY430141       --> ..................................................
FD972425       --> ..................................................
FY448874       --> ..................................................
FY451091       --> ..................................................
EX754163       --> ..................................................
FD546498       --> ..................................................

               1051   -   1101
UN22972        --> ATGAAGCTATGTCCAAGAAGAGCTGGAGATGCAACAGCTGTTTATGCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891092       <-- ATGAAGCTATGTCCAAGAAGAGCTGGAGATGCAACAGCTGTTTATGCTTC
FD984917       <-- ATGAAGCTGTGTCCAAGAAGAGCTGGAGATGCAACAGCTGTTTATGCTTC
EW730988       <-- ATGAAGCTATGTCCAAGAAGAGCTGGAGATGCAACAGCTGTTTATGCTTC
EX758640       <-- ATGAAGCTATGTCCAAGAAGAGCTGGAGATGCAACAGCTGTTTATGCTTC
EY929060       <-- ATGAAGCTATGTCCAAGAAGAGCTGGAGATGCAACAGCTGTTTATGCTTC
FD572593       <-- ATGAAGCTATGTCCAAGAAGAGCTGGAGATGCAACAGCGGTTTATGCTTC
EX892197       <-- ATGAAGCTATGTCCAAGAAGAGCTGGAGATGCAACAGCTGTTTATGCTTC
FD968320       <-- ATGAAGCTATGTCCAAGAAGAGCTGGAGATGCAACAGCTGTTTATGCTTC
EY894610       <-- ATGAAGCTGTGTCCAAGAAGAGCTGGAGATGCAACAGCTGTTTATGCTTC
FD550557       <-- ..................................................
EX754281       --> ..................................................
FD556452       --> ..................................................
EW715937       --> ..................................................
EY916524       --> ..................................................
FD981161       --> ..................................................
FY430141       --> ..................................................
FD972425       --> ..................................................
FY448874       --> ..................................................
FY451091       --> ..................................................
EX754163       --> ..................................................
FD546498       --> ..................................................

               1101   -   1151
UN22972        --> AACTGAGAGAGCTGAGAAAGAACTCAAATGGAAGGCACAATATGGAGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891092       <-- AACTGAGAGAGCTGAGAAAGAACTCAAATGGAAGGCACAATATGGAGTGG  Raphanus sativus var. oleiformis
FD984917       <-- AACCGAGAGAGCTGAGAAAGAACTTGGATGGAAGGCACAATATGGAGTGG  Raphanus raphanistrum subsp. landra
EW730988       <-- AACTGAGAGAGCTGAGAAAGAACTCAAATGGAAGGCACAATATGGAGTGG  Raphanus sativus cv Early Scarlet Globe
EX758640       <-- AACTAAGAGAGCTGAGAAAGAACTTGGATGGAAGGCACAATATGGAGTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY929060       <-- AACTGAGAGAGCTGAGAAAGAACTCAAATGGAAGGCACAATATGGAGTGG  Raphanus sativus var. oleiformis
FD572593       <-- AACCGAGAGAGCTGAGAAAGAACTTGGATGGAAGGCACAATATGGAGTGG  Raphanus sativus cv Early Scarlet Globe
EX892197       <-- AACTGAGAGAGCTGAGAAAGAACTCAAATGGAAGGCACAATATGGAGTGG  Raphanus sativus var. oleiformis
FD968320       <-- AACTAAGAGAGCTGAGAAAGAACTTGGATGGAAGGCACAATATGGAGTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY894610       <-- AACTGAGAGAGCTGAGAAAGAACTCAAATGGAAGGCCCAATATGGAGTGG  Raphanus raphanistrum subsp. maritimus
FD550557       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX754281       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556452       --> ..................................................  Raphanus raphanistrum subsp. landra
EW715937       --> ..................................................  Raphanus sativus var. oleiformis
EY916524       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981161       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY430141       --> ..................................................  Raphanus sativus cv GSK3-1
FD972425       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY448874       --> ..................................................  Raphanus sativus cv GSK3-1
FY451091       --> ..................................................  Raphanus sativus cv GSK3-1
EX754163       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD546498       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               1151   -   1201
UN22972        --> ATGAGATGTGCAGAGATCAATGGAACTGGGCAAATAAGAATCCATGGGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891092       <-- ATGAGATGTGCAGAGATCAATGGAACTGGGCAAATAAGAATCCATGGGGT
FD984917       <-- ATGAGATGTGCAGAGATCAATGGAACTGGGCAAATAAGAATCCATGGGGT
EW730988       <-- ATGAGATGTGCAGAGATCAATGGAACTGGGCAAATAAGAATCCATGGGGT
EX758640       <-- ATGAGATGTGCAGAGATCAATGGAACTGGGCAAATAAGAATCCATGGGGT
EY929060       <-- ATGAGATGTGCAGAGATCAATGGAACTGGGCAAATAAGGATCCATGGGGT
FD572593       <-- ATGAGATGTGCAGAGATCAATGGAACTGGGCAAATAAGAATCCATGGGGT
EX892197       <-- ATGAGATGTGCAGAGATCAATGGAACTGGGCAAATAAGAATCCATGGGGT
FD968320       <-- ATGAGATGTGCAGAGATCAATGGAACTGGGCAAATAAGAATCCATGGGGT
EY894610       <-- ATGAGATGTGCAGAGATCAATGGAACTGGGCAAATAAGAATCCATGGGGT
FD550557       <-- ..................................................
EX754281       --> ..................................................
FD556452       --> ..................................................
EW715937       --> ..................................................
EY916524       --> ..................................................
FD981161       --> ..................................................
FY430141       --> ..................................................
FD972425       --> ..................................................
FY448874       --> ..................................................
FY451091       --> ..................................................
EX754163       --> ..................................................
FD546498       --> ..................................................

               1201   -   1251
UN22972        --> TTCCAGGAAAAGCCTTGAACCATCTT-CATTTTCTCTTTTAAGTTTTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891092       <-- TTCCAGGAAAAGCCTTGAACCATCTT-CATTTTCTCTTTTAAGTTTTTTC
FD984917       <-- TTCCAGGAAAAGCCTTGAACCATCTT-CATTTTCTCTTTTAAGTTTTTTC
EW730988       <-- TTCCAGGAAAAGCCTTGAACCATCTT-CATTTTCTCTTTTAAGTTTTTTC
EX758640       <-- TTCCAGGAAAAGCCTTGA-CCATCTTTCATTTTCTCTTTTAAGTTTTTTC
EY929060       <-- TTCCAGGAAAAGCCTTGAACCATCTT-CATTTTCTCTTTTAAGTTTTTTC
FD572593       <-- TTCCAGGAAAAGCCTTGAACCATTTT-CATTTTTTCTTTTAAGTTTTTTT
EX892197       <-- TTCCAGGAAA-GCCTTGAACCATCTT-CATTTTCTCTTTTAAGTTTTTTC
FD968320       <-- TTCCAGGAAAAGCCTTGA-CCATCTTTCATTTTCTCTTTTAAGTTTTTTC
EY894610       <-- TTCCAGGAAAAGCCTTGAACCATCTT-CATTTTTTCTTTTAAGTTTTTTC
FD550557       <-- ..................................................
EX754281       --> ..................................................
FD556452       --> ..................................................
EW715937       --> ..................................................
EY916524       --> ..................................................
FD981161       --> ..................................................
FY430141       --> ..................................................
FD972425       --> ..................................................
FY448874       --> ..................................................
FY451091       --> ..................................................
EX754163       --> ..................................................
FD546498       --> ..................................................

               1251   -   1301
UN22972        --> TTTTTCTTTCACCACTCAA-CATAAA-GAAAGGGAA-TAAGAATTGTATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891092       <-- TTTTTCTTTCACCACTCAA-CATAAA-GAAAGGGAA-TAAGAATTGTATC
FD984917       <-- TTTTTCTTT.........................................
EW730988       <-- TTTTTCTTTCACCACTCAA-CATAAA-GAAAGGGAA-TAAGAATTGTATC
EX758640       <-- TTTTTCTTTCACCACTTAA-CATAA--GAAAGGGAAATGAGAATTGTATC
EY929060       <-- TTTTTCTTTCACCACTCAA-CATAAA-GAAAGGGAA-TAAGAATTGTATC
FD572593       <-- TCTTTCTTTCACCACTCAA-CATAAAAGAAAGGGAA-TAAGAATTGTATC
EX892197       <-- TTTTTCTTTCACCACTCAA-CATAAA-GAAAGGGAA-TAAGAATTGTATC
FD968320       <-- TTTTTCTTTCACCACTTAA-CATAAA-GAAAGGGAAATAAGAATTGTATC
EY894610       <-- TTTTTCTTTCCCCACTCAAACATAAA-GAAAGGGAA-TAAGAATTGTATC
FD550557       <-- .............................................GTATC
EX754281       --> ..................................................
FD556452       --> ..................................................
EW715937       --> ..................................................
EY916524       --> ..................................................
FD981161       --> ..................................................
FY430141       --> ..................................................
FD972425       --> ..................................................
FY448874       --> ..................................................
FY451091       --> ..................................................
EX754163       --> ..................................................
FD546498       --> .............................................GTATC

               1301   -   1351
UN22972        --> AAACGAGTCTTCTTCCAGTTAATAAGAATTTACGCTATCCACTAATCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891092       <-- ..................................................
FD984917       <-- ..................................................
EW730988       <-- AAACGAGTCTTCTTCCAGTTAATAAGAATTTACGCTATCCACT.......
EX758640       <-- GAACGAGTCTTCTTCCAGTTAATAAGAATTTGCGCTATCC..........
EY929060       <-- AAACGAGTCTTCTTCCAGTTAATAAGAATTTACGCTATC...........
FD572593       <-- AAACGAGTCTTTTTCCAGTTAATAAGAATTTACGCTATCCAC........
EX892197       <-- AAACG.............................................
FD968320       <-- GAACGAGTCTTCTTCCAGTTAATAAGAATTTACGCTATCCAC........
EY894610       <-- AAACGAGTTTTTTTCCAGTTAATAAGAATTTACGCTATCCACTt......
FD550557       <-- AAACGAGTCTTCT-CCAGTTAATAAGAATTTACGCTATCCACTAATCATG
EX754281       --> ..................................................
FD556452       --> ..................................................
EW715937       --> ..................................................
EY916524       --> ..................................................
FD981161       --> ..................................................
FY430141       --> ..................................................
FD972425       --> ..................................................
FY448874       --> ..................................................
FY451091       --> ..................................................
EX754163       --> ..................................................
FD546498       --> AAACGAGTCTTCTTCCAGTTAATAAGAATTTACGCTATCCACTAATCATG

               1351   -   1401
UN22972        --> AAACAAGATGTTGTCTTGTTGAGCAAGTAAGAACCAGAAAATGTTAAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891092       <-- ..................................................
FD984917       <-- ..................................................
EW730988       <-- ..................................................
EX758640       <-- ..................................................
EY929060       <-- ..................................................
FD572593       <-- ..................................................
EX892197       <-- ..................................................
FD968320       <-- ..................................................
EY894610       <-- ..................................................
FD550557       <-- AAACAAGATGTTGTCTTGTTGAGCAAGTAAGAACCAGAAAATGTTAAAAC
EX754281       --> ..................................................
FD556452       --> ..................................................
EW715937       --> ..................................................
EY916524       --> ..................................................
FD981161       --> ..................................................
FY430141       --> ..................................................
FD972425       --> ..................................................
FY448874       --> ..................................................
FY451091       --> ..................................................
EX754163       --> ..................................................
FD546498       --> AAACAAGATGTTGTCTTGTTGAGCAAGTAAGAACCAGAAAATGTTAAAAC

               1401   -   1451
UN22972        --> AACATAACTAAACTTTGTATTACAATAACACAACAAGCAAAAGATAAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891092       <-- ..................................................
FD984917       <-- ..................................................
EW730988       <-- ..................................................
EX758640       <-- ..................................................
EY929060       <-- ..................................................
FD572593       <-- ..................................................
EX892197       <-- ..................................................
FD968320       <-- ..................................................
EY894610       <-- ..................................................
FD550557       <-- AACATAACTAAACTTTGTATTACAATAACACAACAAGCAAAAGATAAAAC
EX754281       --> ..................................................
FD556452       --> ..................................................
EW715937       --> ..................................................
EY916524       --> ..................................................
FD981161       --> ..................................................
FY430141       --> ..................................................
FD972425       --> ..................................................
FY448874       --> ..................................................
FY451091       --> ..................................................
EX754163       --> ..................................................
FD546498       --> AACATAACTAAACTTTGTATTACAATAACACAACAAGCAAAAGATAAAAC

               1451   -   1501
UN22972        --> TACAACTTGATCAATGTTTGAACTCTTTTTTATTTCTCGTGTTCCTCGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891092       <-- ..................................................
FD984917       <-- ..................................................
EW730988       <-- ..................................................
EX758640       <-- ..................................................
EY929060       <-- ..................................................
FD572593       <-- ..................................................
EX892197       <-- ..................................................
FD968320       <-- ..................................................
EY894610       <-- ..................................................
FD550557       <-- TACAACTTGATCAATGTTTGAACTCTTTTTTATTTCTCGTGTTCCTCGCT
EX754281       --> ..................................................
FD556452       --> ..................................................
EW715937       --> ..................................................
EY916524       --> ..................................................
FD981161       --> ..................................................
FY430141       --> ..................................................
FD972425       --> ..................................................
FY448874       --> ..................................................
FY451091       --> ..................................................
EX754163       --> ..................................................
FD546498       --> TACAACTTGATCAATGTTTGAACTCTTTTTTATTTCTCGTGTTCCTCGCT

               1501   -   1551
UN22972        --> GCTAATGTGATACATGTATCCGCATATTTGCAAGTTTGTTTCTTCTTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891092       <-- ..................................................
FD984917       <-- ..................................................
EW730988       <-- ..................................................
EX758640       <-- ..................................................
EY929060       <-- ..................................................
FD572593       <-- ..................................................
EX892197       <-- ..................................................
FD968320       <-- ..................................................
EY894610       <-- ..................................................
FD550557       <-- GCTAATGTGATACATGTATCCGCATATTTGCAAGTTTGTTTCTTCTTCTG
EX754281       --> ..................................................
FD556452       --> ..................................................
EW715937       --> ..................................................
EY916524       --> ..................................................
FD981161       --> ..................................................
FY430141       --> ..................................................
FD972425       --> ..................................................
FY448874       --> ..................................................
FY451091       --> ..................................................
EX754163       --> ..................................................
FD546498       --> GCTAATGTGATACATGTATCCGCATATTTGCAAGTTTGTTTCTTCTTCTG

               1551   -   1601
UN22972        --> TGTTTAGACTACCTCGCCATCTTCATAGTTGCTACTCTTGAGGATGTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891092       <-- ..................................................
FD984917       <-- ..................................................
EW730988       <-- ..................................................
EX758640       <-- ..................................................
EY929060       <-- ..................................................
FD572593       <-- ..................................................
EX892197       <-- ..................................................
FD968320       <-- ..................................................
EY894610       <-- ..................................................
FD550557       <-- TGTTTAGACTACCTCGCCATCTTCATAGTTGCTACTCTTGAGGATGTTGT
EX754281       --> ..................................................
FD556452       --> ..................................................
EW715937       --> ..................................................
EY916524       --> ..................................................
FD981161       --> ..................................................
FY430141       --> ..................................................
FD972425       --> ..................................................
FY448874       --> ..................................................
FY451091       --> ..................................................
EX754163       --> ..................................................
FD546498       --> TGTTTAGACTACCTCGCCATCTTCATAGTTGCTACTCTTGAGGATGTTGT

               1601   -   1651
UN22972        --> ATTTACAGAGAGGACAGGTAGCGTTAATGTAAAGCCATTTGTCCACACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891092       <-- ..................................................
FD984917       <-- ..................................................
EW730988       <-- ..................................................
EX758640       <-- ..................................................
EY929060       <-- ..................................................
FD572593       <-- ..................................................
EX892197       <-- ..................................................
FD968320       <-- ..................................................
EY894610       <-- ..................................................
FD550557       <-- ATTTACAGAGAGGACAGGTAGCGTTAATGTAAAGCCATTTGTCCACACAA
EX754281       --> ..................................................
FD556452       --> ..................................................
EW715937       --> ..................................................
EY916524       --> ..................................................
FD981161       --> ..................................................
FY430141       --> ..................................................
FD972425       --> ..................................................
FY448874       --> ..................................................
FY451091       --> ..................................................
EX754163       --> ..................................................
FD546498       --> ATTTACAGAGAGGACAGGTAGCGTTAATGTAAAGCCATTTGTCCACACAA

               1651   -   1701
UN22972        --> TTGCAATGGAAATGGTGGCCACAAGGAAGTTCTCTTAGCTCTGTCTCGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891092       <-- ..................................................
FD984917       <-- ..................................................
EW730988       <-- ..................................................
EX758640       <-- ..................................................
EY929060       <-- ..................................................
FD572593       <-- ..................................................
EX892197       <-- ..................................................
FD968320       <-- ..................................................
EY894610       <-- ..................................................
FD550557       <-- TTGCAATGGAAATGGTGGCCACAAGGAAGTTCTCTTAGCTCTGTCTCGTC
EX754281       --> ..................................................
FD556452       --> ..................................................
EW715937       --> ..................................................
EY916524       --> ..................................................
FD981161       --> ..................................................
FY430141       --> ..................................................
FD972425       --> ..................................................
FY448874       --> ..................................................
FY451091       --> ..................................................
EX754163       --> ..................................................
FD546498       --> TTGCAATGGAAATGGTGGCCACAAGGAAGTTCTCTTAGCTCTGTCTCGTC

               1701   -   1751
UN22972        --> TTCATAAACTGAAAGACAAATGGAACATTCTGCATCCTCATGAGGAAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891092       <-- ..................................................
FD984917       <-- ..................................................
EW730988       <-- ..................................................
EX758640       <-- ..................................................
EY929060       <-- ..................................................
FD572593       <-- ..................................................
EX892197       <-- ..................................................
FD968320       <-- ..................................................
EY894610       <-- ..................................................
FD550557       <-- TTCATAAACTGAAAGACAAATGGAACATTCTGCATCCTCATGAGGAAGAG
EX754281       --> ..................................................
FD556452       --> ..................................................
EW715937       --> ..................................................
EY916524       --> ..................................................
FD981161       --> ..................................................
FY430141       --> ..................................................
FD972425       --> ..................................................
FY448874       --> ..................................................
FY451091       --> ..................................................
EX754163       --> ..................................................
FD546498       --> TTCATAAACTGAAAGACAAATGGAACATTCTGCATCCTCATGAGGAAGAG

               1751   -   1801
UN22972        --> TATGTTGGAGGGGTGAATCTGTACCACATTCAGTCATCACTCCTCCTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891092       <-- ..................................................
FD984917       <-- ..................................................
EW730988       <-- ..................................................
EX758640       <-- ..................................................
EY929060       <-- ..................................................
FD572593       <-- ..................................................
EX892197       <-- ..................................................
FD968320       <-- ..................................................
EY894610       <-- ..................................................
FD550557       <-- TATGTTGGAGGGGTGAATCTGTACCACATTCAGTCATCACTCCTCCTGAA
EX754281       --> ..................................................
FD556452       --> ..................................................
EW715937       --> ..................................................
EY916524       --> ..................................................
FD981161       --> ..................................................
FY430141       --> ..................................................
FD972425       --> ..................................................
FY448874       --> ..................................................
FY451091       --> ..................................................
EX754163       --> ..................................................
FD546498       --> TATGTTGGAGGGGTGAATCTGTACCACATTCAGTCATCACTCCTCCTGAA

               1801   -   1851
UN22972        --> TCTCCTTTTGCTTGTTCTTCATCAAAAGTATGTTTCTCAGACACACCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891092       <-- ..................................................
FD984917       <-- ..................................................
EW730988       <-- ..................................................
EX758640       <-- ..................................................
EY929060       <-- ..................................................
FD572593       <-- ..................................................
EX892197       <-- ..................................................
FD968320       <-- ..................................................
EY894610       <-- ..................................................
FD550557       <-- TCTCCTTTTGCTTGTTCTTCATCAAAAGTATGTTTCTCAGACACACCAAC
EX754281       --> ..................................................
FD556452       --> ..................................................
EW715937       --> ..................................................
EY916524       --> ..................................................
FD981161       --> ..................................................
FY430141       --> ..................................................
FD972425       --> ..................................................
FY448874       --> ..................................................
FY451091       --> ..................................................
EX754163       --> ..................................................
FD546498       --> TCTCCTTTTGCTTGTTCTTCATCAAAAGTATGTTTCTCAGACACACCAAC

               1851   -   1901
UN22972        --> CTTTCGGAATTTGAATTTCGTAAGTTGGTCAATGTCTTCTTTAGAAGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891092       <-- ..................................................
FD984917       <-- ..................................................
EW730988       <-- ..................................................
EX758640       <-- ..................................................
EY929060       <-- ..................................................
FD572593       <-- ..................................................
EX892197       <-- ..................................................
FD968320       <-- ..................................................
EY894610       <-- ..................................................
FD550557       <-- CTTTCGGAATTTGAATTTCGTAAGTTGGTCAATGTCTTCTTTAGAAGCTC
EX754281       --> ..................................................
FD556452       --> ..................................................
EW715937       --> ..................................................
EY916524       --> ..................................................
FD981161       --> ..................................................
FY430141       --> ..................................................
FD972425       --> ..................................................
FY448874       --> ..................................................
FY451091       --> ..................................................
EX754163       --> ..................................................
FD546498       --> CTTTCGGAATTTGAATTTCGTAAGTTGGTCAATGTCTTCTTTAGAAGCTC

               1901   -   1951
UN22972        --> CTTCCTGCATTTTCAACTGTTCCGCAACTGCGTAGAGAACCGCAATGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891092       <-- ..................................................
FD984917       <-- ..................................................
EW730988       <-- ..................................................
EX758640       <-- ..................................................
EY929060       <-- ..................................................
FD572593       <-- ..................................................
EX892197       <-- ..................................................
FD968320       <-- ..................................................
EY894610       <-- ..................................................
FD550557       <-- CTTCCTGCATTTTCAACTGTTCCGCAACTGCGTAGAGAACCGCAATGATG
EX754281       --> ..................................................
FD556452       --> ..................................................
EW715937       --> ..................................................
EY916524       --> ..................................................
FD981161       --> ..................................................
FY430141       --> ..................................................
FD972425       --> ..................................................
FY448874       --> ..................................................
FY451091       --> ..................................................
EX754163       --> ..................................................
FD546498       --> CTTCCTGCATTTTCAACTGTTCCGCAACTGCGTAGAGAACCGCAATGATG

               1951   -   2001
UN22972        --> CAAGGCAAG
                   ~~~~~~~~~
EX891092       <-- .........
FD984917       <-- .........
EW730988       <-- .........
EX758640       <-- .........
EY929060       <-- .........
FD572593       <-- .........
EX892197       <-- .........
FD968320       <-- .........
EY894610       <-- .........
FD550557       <-- CAAGGCAAG
EX754281       --> .........
FD556452       --> .........
EW715937       --> .........
EY916524       --> .........
FD981161       --> .........
FY430141       --> .........
FD972425       --> .........
FY448874       --> .........
FY451091       --> .........
EX754163       --> .........
FD546498       --> .........