1      -     51
UN22975        --> AAATTTAATATGTTTCTTAAGATTTAAAGATATTAAATAGAAACC-AAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973989       <-- ..................AAGATTTAAATATATTAAATAGAAACC-AAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549611       <-- ........................TAAATATATTAAATAGAAACCCAAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922955       <-- ..................................AAATAGAAACC-AAAT  Raphanus raphanistrum subsp. landra
EV524747       <-- ......................................AGAAACC-AAAT  Raphanus raphanistrum subsp. maritimus
EV568925       <-- ..........................................ACC-AAAT  Raphanus raphanistrum subsp. landra
EV568084       <-- .................................................T  Raphanus raphanistrum subsp. landra
FD552105       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX890073       <-- ..................................................  Raphanus sativus var. oleiformis
FD965925       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD550546       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724876       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX771462       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX749836       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW724141       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD541229       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX771357       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW731409       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD948709       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD972216       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD941080       <-- ..................................................  Raphanus sativus var. oleiformis
EX773550       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX747036       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV571471       --> AAATTTAATATGTTTCTTAAGATTTAAAGATATTAAATAGAAACC-AAAT  Raphanus raphanistrum subsp. landra
FD968146       --> AAATTTAATATGTTTCTTAAGATTTAAAGATATTAAATAGAAACC-AAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919202       --> agATTTAATATGTTTCTTAAGATTTAAAGATATTAAATAGAAACC-AAAT  Raphanus raphanistrum subsp. landra
EX775499       --> .......ATATGTTTCTTAAGATTTAAAGATATTAAATAGAAACC-AAAT  Raphanus raphanistrum subsp. landra
EV572887       --> ..................AAGATTTAAAGATATTAAATAGAAACC-AAAT  Raphanus raphanistrum subsp. landra
EV573545       --> ..................AAGATTTAAAGATATTAAATAGAAACC-AAAT  Raphanus raphanistrum subsp. landra
EX893665       --> ..................AAGATTTAAAGATATTAAATAGAAACC-AAAT  Raphanus sativus var. oleiformis
FD547934       --> ..................AAGATTTAAATATATTAAATAGAAACC-AAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX775409       --> ...................gGATTTAAAGATATTAAATAGAAACC-AAAT  Raphanus raphanistrum subsp. landra
EX777350       --> ....................GATTTAAAGATATTAAATAGAAACC-AAAT  Raphanus raphanistrum subsp. landra
FD944459       --> ...................cGATTTAAAGATATTAAATAGAAACC-AAAT  Raphanus sativus cv Early Scarlet Globe
EX753427       --> ..................aaaATTTAAAGATATTAAATAAAAACC-AAAT  Raphanus raphanistrum subsp. maritimus
EV545049       --> ........................TAAATATATTAAATAGAAACC-AAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV529671       --> ......................................AGAAACC-AAAT  Raphanus raphanistrum subsp. maritimus
FD961532       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW728671       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD546488       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537557       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               51     -    101
UN22975        --> TCGTCCCAAAACGATTCAGTTTTACATTGTTAATTGTTTTCCTT-AAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973989       <-- TCGTCCCAAAACGATTCAGTTTTACATTGTTAATTGTTTTCCTT-AAAAT
EV549611       <-- TCGTCCCAAAACGATTCAGTTTTACATTGTTAATTGTTTTCCTTTAAAAT
EY922955       <-- TCGTCCCAAAAAGATTCAGTTTTACATTGTTAATTGTTTTCCTT-AAAAT
EV524747       <-- TCGTCCCAAAACGATTCAGTTTTACATTGTTAATTGTTTTCCTT-AAAAT
EV568925       <-- TCGTCCCAAAACGATTCAGTTTTACATTGTTAATTGTTTTCCTT-AAAAT
EV568084       <-- TCGTCCCAAAACGATTCAGTTT-ACATTGTTAAT-GTT--TCTT-AAAAT
FD552105       <-- ....................tcagtttacatgtaatgTTTCCTT-AAAAT
EX890073       <-- ..........................................TT-AAAAT
FD965925       <-- ......................................cgtttcttAAAT
FD550546       <-- .................................................T
EW724876       <-- ..................................................
EX771462       <-- ..................................................
EX749836       <-- ..................................................
EW724141       <-- ..................................................
FD541229       <-- ..................................................
EX771357       <-- ..................................................
EW731409       <-- ..................................................
FD948709       <-- ..................................................
FD972216       <-- ..................................................
FD941080       <-- ..................................................
EX773550       <-- ..................................................
EX747036       <-- ..................................................
EV571471       --> TCGTCCCAAAACGATTCAGTTTTACATTGTTAATTGTTTTCCTT-AAAAT
FD968146       --> TCGTCCCAAAACGATTCAGTTTTACATTGTTAATTGTTTTCCTT-AAAAT
EY919202       --> TCGTCCCAAAACGATTCAGTTTTACATTGTTAATTGTTTTCCTT-AAAAT
EX775499       --> TCGTCCCAAAACGATTCAGTTTTACATTGTTAATTGTTTTCCTT-AAAAT
EV572887       --> TCGTCCCAAAACGATTCAGTTTTACATTGTTAATTGTTTTCCTT-AAAAT
EV573545       --> TCGTCCCAAAACGATTCAGTTTTACATTGTTAATTGTTTTCCTT-AAAAT
EX893665       --> TCGTCCCAAAACGATTCAGTTTTACATTGTTAATTGCTTTCCTT-AAAAT
FD547934       --> TCGTCCCAAAACGATTCAGTTTTACATTGTTAATTGTTTTCCTT-AAAAT
EX775409       --> TCGTCCCAAAACGATTCAGTTTTACATTGTTAATTGTTTTCCTT-AAAAT
EX777350       --> TCGTCCCAAAACGATTCAGTTTTACATTGTTAATTGTTTTCCTT-AAAAT
FD944459       --> TCGTCCCAAAACGATTCAGTTTTACATTGTTAATTGTTTTCCTT-AAAAT
EX753427       --> TCGTCCCAAAACGATTCAGTTTTACATTGTTAATTGTTTTCCTT-AAAAT
EV545049       --> TCGTCCCAAAACGATTCAGTTTTACATTGTTAATTGTTTTCCTT-AAAAT
EV529671       --> TCGTCCCAAAACGATTCAGTTTTACATTGTTAATTGTTTTCCTT-AAAAT
FD961532       --> ........................................CCTT-AAAAT
EW728671       --> ..................................................
FD546488       --> ..................................................
FD537557       --> ..................................................

               101    -    151
UN22975        --> AGATAAGCATGAACCCAAACGAGCTAGAACATAACATATTTAGATAGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973989       <-- AGATAAGCATGAACCCAAACGAACTAGAACATAACATATTTAGATAGTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549611       <-- AGATAAGCATGAACCCAAACGAACTAGAACATAACATATTTAGATAGTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922955       <-- AGATAAGCATGAACCCAAACGAGCTAGAACATAACATATTTAGATAGTGA  Raphanus raphanistrum subsp. landra
EV524747       <-- AGATAAGCATGAACCCAAACGAGCTAGAACATAACATATTTAGATAGTGA  Raphanus raphanistrum subsp. maritimus
EV568925       <-- AGATAAGCATGAACCCAAACGAGCTAGAACATAACATATTTAGATAGTGA  Raphanus raphanistrum subsp. landra
EV568084       <-- AGATAAGCATGAACCCAAACGAGCTAGAACATAACATATTTAGATAGTGA  Raphanus raphanistrum subsp. landra
FD552105       <-- AGATAAGCATGAACCCAAACGAACTAGAACATAACATATTTAGATAGTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX890073       <-- AGATAAGCATGAACCCAAACGAGCTAGAACATAACATATTTAGATAGTGA  Raphanus sativus var. oleiformis
FD965925       <-- AGATAAGCATGAACCCAAACGAGCTAGAACATAACATATTTAGATAGTGA  Raphanus raphanistrum subsp. maritimus
FD550546       <-- AGATA-GCATGA-CCCAAACGAACTAGAACATA-CATATT-AGATAGTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724876       <-- .....AGCATGAACCCAAACGAGCTAGAACATAACATATTTAGATAGTGA  Raphanus sativus cv Early Scarlet Globe
EX771462       <-- ......GCATGA-CCCAA-CGAGCTAGA-CAT-ACATATTTAGATAGTGA  Raphanus raphanistrum subsp. landra
EX749836       <-- ............ACCCAAACGAGCTAGAACATAACATATTTAGATAGTGA  Raphanus raphanistrum subsp. maritimus
EW724141       <-- ....................cAGCTAGAACATAACATATTTAGATAGTGA  Raphanus sativus cv Early Scarlet Globe
FD541229       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX771357       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW731409       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD948709       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD972216       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD941080       <-- ..................................................  Raphanus sativus var. oleiformis
EX773550       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX747036       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV571471       --> AGATAAGCATGAACCCAAACGAGCTAGAACATAACATATTTAGATAGTGA  Raphanus raphanistrum subsp. landra
FD968146       --> AGATAAGCATGAACCCAAACGAACTAGAACATAACATATTTAGATAGTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919202       --> AGATAAGCATGAACCCAAACGAGCTAGAACATAACATATTTAGATAGCGA  Raphanus raphanistrum subsp. landra
EX775499       --> AGATAAGCATGAACCCAAACGAGCTAGAACATAACATATTTAGATAGTGA  Raphanus raphanistrum subsp. landra
EV572887       --> AGATAAGCATGAACCCAAACGAGCTAGAACATAACATATTTAGATAGTGA  Raphanus raphanistrum subsp. landra
EV573545       --> AGATAAGCATGAACCCAAACGAGCTAGAACATAACATATTTAGATAGTGA  Raphanus raphanistrum subsp. landra
EX893665       --> AGATAAGCATGAACCCAAACGAGCTAGAACATAACATATTTAGATAGTGA  Raphanus sativus var. oleiformis
FD547934       --> AGATAAGCATGAACCCAAACGAACTAGAACATAACATATTTAGATAGTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX775409       --> AGATAAGCATGAACCCAAACGAGCTAGAACATAACATATTTAGATAGTGA  Raphanus raphanistrum subsp. landra
EX777350       --> AGATAAGCATGAACCCAAACGAGCTAGAACATAACATATTTAGATAGTGA  Raphanus raphanistrum subsp. landra
FD944459       --> AGATAAGCATGAACCCAAACGAGCTAGAACATAACATATTTAGATAGTGA  Raphanus sativus cv Early Scarlet Globe
EX753427       --> AAATAAGCATGAACCCAAACGAGCTAAAACATAACATATTTAAATAGTGA  Raphanus raphanistrum subsp. maritimus
EV545049       --> AGATAAGCATGAACCCAAACGAACTAGAACATAACATATTTAGATAGTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV529671       --> AGATAAGCATGAACCCAAACGAGCTAGAACATAACATATTTAGATAGTGA  Raphanus raphanistrum subsp. maritimus
FD961532       --> AGATAAGCATGAACCCAAACGAGCTAGAACATAACATATTTAGATAGTGA  Raphanus raphanistrum subsp. maritimus
EW728671       --> ....................cAGCTAGAACATAACATATTTAGATAGTGA  Raphanus sativus cv Early Scarlet Globe
FD546488       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537557       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               151    -    201
UN22975        --> ACAAAAGATAGACCAGACCATCCATCGTCTTCAGAGCATCATCAAGACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973989       <-- ACAAAAGATAGAC.....................................
EV549611       <-- ACAAAAGATAGACCAGACCATCCATCGTCTTCAGAGCATCATCAAGACAG
EY922955       <-- ACAAAAGATAGACCAGACCATCCATCGTCTTCAGAGCATCATCAAGACAA
EV524747       <-- ACAAAAGATAGACCAGACCATCCATCGTCTTCAGAGCATCATCAAGACAG
EV568925       <-- ACAAAAGATAGACCAGACCATCCATCGTCTTCAGAGCATCATCAAGACAG
EV568084       <-- ACAAAAGATAGACCAGACCATCCATCGTCTTCAGAGCATCATCAAGACAG
FD552105       <-- ACAAAAGATAGACCAGACCATCCATCGTCTTCAGAGCATCATCAAGACAG
EX890073       <-- ACAAAAGATAGACCAGACCATCCATCGTCTTCAGAGCATCATCAAGACAG
FD965925       <-- ACAAA-GATAGACCAGACCATCCATCGTCTTCAGAGCATCATCAAGACAG
FD550546       <-- ACAAA-GATAGACCAGACCATCCATCGTCT-CAGAGCATCATCAAGACAG
EW724876       <-- ACAAAAGATAGACCAGACCATCCATCGTCTTCAGAGCATCATCAAGACAG
EX771462       <-- -C-AAAGATAGACCAGACCATCCATCGTCT-CAGAGCATCATCAAGACAG
EX749836       <-- ACAAAAGATAGACCAGACCATCCATCGTCT-CAGAGCATCATCAAGACAG
EW724141       <-- ACAAAAGATAGACCAGACCATCCATCGTCTTCAGAGCATCATCAAGACAG
FD541229       <-- ....................TCCATCGTCTTCAGAGCATCATCAAGACAG
EX771357       <-- ..............................TCAGAGCATCATCA-GACAG
EW731409       <-- ..................................................
FD948709       <-- ..................................................
FD972216       <-- ..................................................
FD941080       <-- ..................................................
EX773550       <-- ..................................................
EX747036       <-- ..................................................
EV571471       --> ACAAAAGATAGACCAGACCATCCATCGTCTTCAGAGCATCATCAAGACAG
FD968146       --> ACAAAAGATAGACCAGACCATCCATCGTCTTCAGAGCATCATCAAGACAG
EY919202       --> ACAAAAGATAGACCAGACCATCCATCGTCTTCAGAGCATCATCAAGACAG
EX775499       --> ACAAAAGATAGACCAGACCATCCATCGTCTTCAGAGCATCATCAAGACAG
EV572887       --> ACAAAAGATAGACCAGACCATCCATCGTCTTCAGAGCATCATCAAGACAG
EV573545       --> ACAAAAGATAGACCAGACCATCCATCGTCTTCAGAGCATCATCAAGACAG
EX893665       --> ACAAAAGATAGACCAGACCATCCATCGTCTTCAGAGCATCATCAAGACAG
FD547934       --> ACAAAAGATAGACCAGACCATCCATCGTCTTCAGAGCATCATCAAGACAG
EX775409       --> ACAAAAGATAGACCAGACCATCCATCGTCTTCAGAGCATCATCAAGACAG
EX777350       --> ACAAAAGATAGACCAGACCATCCATCGTCTTCAGAGCATCATCAAGACAG
FD944459       --> ACAAAAGATAGACCAGACCATCCATCGTCTTCAGAGCATCATCAAGACAG
EX753427       --> ACAAAAGATAGACCAAACCATCCATCGTCTTCAAAGCATCATCAAGACAG
EV545049       --> ACAAAAGATAGACCAGACCATCCATCGTCTTCAGAGCATCATCAAGACAG
EV529671       --> ACAAAAGATAGACCAGACCATCCATCGTCTTCAGAGCATCATCAAGACAG
FD961532       --> ACAAAAGATAGACCAGACCATCCATCGTCTTCAGAGCATCATCAAGACAG
EW728671       --> ACAAAAGATAGACCAGACCATCCATCGTCTTCAGAGCATCATCAAGACAG
FD546488       --> ............CCAAACCATCCATCGTCTTCAGAGCATCATCAAGACAG
FD537557       --> ..................................................

               201    -    251
UN22975        --> AAAACAAGCAGAGGAACAAATTGTTGGAATTACGCAGCACGAAACCGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973989       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549611       <-- AAAACAAGCAGAGGAACAAAGTGTTGGAATTACGCAGCACGAAACCGGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922955       <-- AAAACAAGCAGAGGAACAAATTGTTGGAATTACGCAGCACGAAACCGGTG  Raphanus raphanistrum subsp. landra
EV524747       <-- AAAACAAGCAGAGGAACAAATTGTTGGAATTACGCAGCACGAAACCGGTG  Raphanus raphanistrum subsp. maritimus
EV568925       <-- AAAACAAGCAGAGGAACAAATTGTTGGAATTACGCAGCACGAAACCGGTG  Raphanus raphanistrum subsp. landra
EV568084       <-- AAAACAAGCAGAGGAACAAATTGTTGGAATTACGCAGCACGAAACCGGTG  Raphanus raphanistrum subsp. landra
FD552105       <-- AAAACAAGCAGAGGAACAAAGTGTTGGAATTACGCAGCACGAAACCGGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX890073       <-- AAAACAAGCAGAGGAACAAATTGTTGGAATTACGCAGCACGAAACCGGTG  Raphanus sativus var. oleiformis
FD965925       <-- AAAACAAGCAGAGGAACAAATTGTTGGAATTACGCAGCACGAAACCGGTG  Raphanus raphanistrum subsp. maritimus
FD550546       <-- AAAACAAGCAGAGGAACAAAGTGTTGGAATTACGCAGCACGAAACCGGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724876       <-- AAAACAAGCAGAGGAACAAATTGTTGGAATTACGCAGCACGAAACCGGTG  Raphanus sativus cv Early Scarlet Globe
EX771462       <-- AAA-CAAGCAGAGGA-CAAATTGTTGGAATTACGCAGCACGAAACCGGTG  Raphanus raphanistrum subsp. landra
EX749836       <-- AAAACAAGCAGAGGAACAAATTGTTGGAATTACGCAGCACGAAACCGGTG  Raphanus raphanistrum subsp. maritimus
EW724141       <-- AAAACAAGCAGAGGAACAAATTGTTGGAATTACGCAGCACGAAACCGGTG  Raphanus sativus cv Early Scarlet Globe
FD541229       <-- AAAACAAGCAGAGGAACAAAGTGTTGGAATTACGCAGCACGAAACCGGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX771357       <-- AAA-CAAGCAGAGGA-CAAAT-GTTGGAATTACGCAGCACGAAACCGGTG  Raphanus raphanistrum subsp. landra
EW731409       <-- ..................................CAGCACGAAACCGGTG  Raphanus sativus cv Rat-Tail Radish #3870
FD948709       <-- ..........................................AACCGGTG  Raphanus sativus cv Early Scarlet Globe
FD972216       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD941080       <-- ..................................................  Raphanus sativus var. oleiformis
EX773550       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX747036       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV571471       --> AAAACAAGCAGAGGAACAAATTGTTGGAATTACGCAGCACGAAACCGGTG  Raphanus raphanistrum subsp. landra
FD968146       --> AAAACAAGCAGAGGAACAAAGTGTTGGAATTACGCAGCACGAAACCGGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919202       --> AAAACAAGCAGAGGAACAAATTGTTGGAATTACGCAGCACGAAACCGGTG  Raphanus raphanistrum subsp. landra
EX775499       --> AAAACAAGCAGAGGAACAAATTGTTGGAATTACGCAGCACGAAACCGGGG  Raphanus raphanistrum subsp. landra
EV572887       --> AAAACAAGCAGAGGAACAAATTGTTGGAATTACGCAGCACGAAACCGGTG  Raphanus raphanistrum subsp. landra
EV573545       --> AAAACAAGCAGAGGAACAAATTGTTGGAATTACGCAGCACGAAACCGGTG  Raphanus raphanistrum subsp. landra
EX893665       --> AAAACAAGCAGAGGAACAAATTGTTGGAATTACGCAGCACGAAACCGGTG  Raphanus sativus var. oleiformis
FD547934       --> AAAACAAGCAGAGGAACAAAGTGTTGGAATTACGCAGCACGAAACCGGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX775409       --> AAAACAAGCAGAGGAACAAATTGTTGGAATTACGCAGCACGAAACCGGTG  Raphanus raphanistrum subsp. landra
EX777350       --> AAAACAAGCAGAGGAACAAATTGTTGGAATTACGCAGCACGAAACCGGTA  Raphanus raphanistrum subsp. landra
FD944459       --> AAAACAAGCAGAGGAACAAATTGTTGGAATTACGCAGCACGAAACCGGTG  Raphanus sativus cv Early Scarlet Globe
EX753427       --> AAAACAAGCAAAGGAACAAATTGTTGGAATTACCCAGCACGAAACCGGTG  Raphanus raphanistrum subsp. maritimus
EV545049       --> AAAACAAGCAGAGGAACAAAGTGTTGGAATTACGCAGCACGAAACCGGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV529671       --> AAAACAAGCAGAGGAACAAATTGTTGGAATTACGCAGCACGAAACCGGTG  Raphanus raphanistrum subsp. maritimus
FD961532       --> AAAACAAGCAGAGGAACAAATTGTTGGAATTACGCAGCACGAAACCGGTG  Raphanus raphanistrum subsp. maritimus
EW728671       --> AAAACAAGCAGAGGAACAAATTGTTGGAATTACGCAGCACGAAACCGGTG  Raphanus sativus cv Early Scarlet Globe
FD546488       --> AAAACAAGCAGAGGAACAAAGTGTTGGAATTACCCAGCACGAAACCGGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537557       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               251    -    301
UN22975        --> CTTTCGTTTGAGTAATCCGGGTTTAACCCGGTTCCGGTAGCATCAGTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973989       <-- ..................................................
EV549611       <-- CTTTCGTTTGAGTAATCCGGGTTTAACCCGGTTCCGGTAGCATCAGTGAT
EY922955       <-- CTTTCGTTTGAGTAATCCGGGTTTAACCCGGTTCCGGTAGCATCAGTGAT
EV524747       <-- CTTTCGTTTGAGTAATCCGGGTTTAACCCGGTTCCGGTAGCATCAGTGAT
EV568925       <-- CTTTCGTTTGAGTAATCCGGGTTTAACCCGGTTCCGGTAGCATCAGTGAT
EV568084       <-- CTTTCGTTTGAGTAATCCGGGTTTAACCCGGTTCCGGTAGCATCAGTGAT
FD552105       <-- CTTTCGTTTGAGTAATCCGGGTTTAACCCGGTTCCGGTAGCATCAGTGAT
EX890073       <-- CTTTCGTTTGAGTAATCCGGGTTTAACCCGGTTCCGGTAGCATCAGTGAT
FD965925       <-- CTTTCGTTTGAGTAATCCGGGTTTAACCCGGTTCCGGTAGCATCAGTGAT
FD550546       <-- CTTTCGTTTGAGTAATCCGGGTTTAACCCGGTTCCGGTAGCATCAGTGAT
EW724876       <-- CTTTCGTTTGAGTAATCCGGGTTTAACCCGGTTCCGGTAGCATCAGTGAT
EX771462       <-- CTTTCGTTTGAGTAATCCGGGTTTAACCCGGTTCCGGTAGCATCAGTGAT
EX749836       <-- CTTTCGTTTGAGTAATCCGGGTTTAACCCGGTTCCGGTAGCATCAGTGAT
EW724141       <-- CTTTCGTTTGAGTAATCCGGGTTTAACCCGGTTCCGGTAGCATCAGTGAT
FD541229       <-- CTTTCGTTTGAGTAATCCGGGTTTAACCCGGTTCCGGTAGCATCAGTGAT
EX771357       <-- CTT-CG-TTGAGTAATCCGGGTTTAACCCGGTTCCGGTAGCATCAGTGAT
EW731409       <-- CTTTCGTTTGAGTAATCCGGGTTTAACCCGGTTCCGGTAGCATCAGTGAT
FD948709       <-- CTTTCGTTTGAGTAATCCGGGTTTAACCCGGTTCCGGTAGCATCAGTGAT
FD972216       <-- ......TTTGAGTAATCCGGGTTTAACCCGGTTCCGGTAGCATCAGTGAT
FD941080       <-- ..................................................
EX773550       <-- ..................................................
EX747036       <-- ..................................................
EV571471       --> CTTTCGTTTGAGTAATCCGGGTTTAACCCGGTTCCGGTAGCATCAGTGAT
FD968146       --> CTTTCGTTTGAGTAATCCGGGTTTAACCCGGTTCCGGTAGCATCAGTGAT
EY919202       --> CTTTCGTTTGAGTAATCCGGGTTTAACCCGGTTCCGGTAGCATCAGTGAT
EX775499       --> CTTTCGTTTGAGTAATCCGGGTTTAACCCGGTTCCGGTAGCATCAGTGAT
EV572887       --> CTTTCGTTTGAGTAATCCGGGTTTAACCCGGTTCCGGTAGCATCAGTGAT
EV573545       --> CTTTCGTTTGAGTAATCCGGGTTTAACCCGGTTCCGGTAGCATCAGTGAT
EX893665       --> CTTTCGTTTGAGTAATCCGGGTTTAACCCGGTTCCGGTAGCATCAGTGAT
FD547934       --> CTTTCGTTTGAGTAATCCGGGTTTAACCCGGTTCCGGTAGCATCAGTGAT
EX775409       --> CTTTCGTTTGAGTAATCCGGGTTTAACCCGGTTCCGGTAGCATCAGTGAT
EX777350       --> CTTTCGTTTGAGTAATCCGGGTTTAACCCGGTTCCGGTAGCATCAGTGAT
FD944459       --> CTTTCGTTTGAGTAATCCGGGTTTAACCCGGTTCCGGTAGCATCAGTGAT
EX753427       --> CTTTCGTTTGAGTAATCCGGGTTTAACCCGGTTCCGGTAGCATCAGTGAT
EV545049       --> CTTTCGTTTGAGTAATCCGGGTTTAACCCGGTTCCGGTAGCATCAGTGAT
EV529671       --> CTTTCGTTTGAGTAATCCGGGTTTAACCCGGTTCCGGTAGCATCAGTGAT
FD961532       --> CTTTCGTTTGAGTAATCCGGGTTTAACCCGGTTCCGGTAGCATCAGTGAT
EW728671       --> CTTTCGTTTGAGTAATCCGGGTTTAACCCGGTTCCGGTAGCATCAGTGAT
FD546488       --> CTTTCGTTTGAGTAATCCGGGTTTAACCCGGTTCCGGTAGCATCAGTGAT
FD537557       --> ..................................................

               301    -    351
UN22975        --> ATTGCCTCCTAGCAGTCCGGTGGTTGGTGTGCCAGTGAATGGACTGCCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973989       <-- ..................................................
EV549611       <-- ATTGCCTCCTAGCAGTCCGGTGGTTGGTGTGCCAGTGAATGGACTGCCAG
EY922955       <-- ATTGCCTCCTAGCAGTCCGGTGGTTGGTGTGCCAGTGAATGGACTGCCAG
EV524747       <-- ATTGCCTCCTAGCAGTCCGGTGGTTGGTGTGCCAGTGAATGGACTGCCAG
EV568925       <-- ATTGCCTCCTAGCAGTCCGGTGGTTGGTGTGCCAGTGAATGGACTGCCAG
EV568084       <-- ATTGCCTCCTAGCAGTCCGGTGGTTGGTGTGCCAGTGAATGGACTGCCAG
FD552105       <-- ATTGCCTCCTAGCAGTCCGGTGGTTGGTGTGCCAGTGAATGGACTGCCAG
EX890073       <-- ATTGCCTCCTAGCAGTCCGGTGGTTGGTGTGCCAGTGAATGGACTGCCAG
FD965925       <-- ATTGCCTCCTAGCAGTCCGGTGGTTGGTGTGCCAGTGAATGGACTGCCAG
FD550546       <-- ATTGCCTCCTAGCAGTCCGGTGGTTGGTGTGCCAGTGAATGGACTGCCAG
EW724876       <-- ATTGCCTCCTAGCAGTCCGGTGGTTGGTGTGCCAGTGAATGGACTGCCAG
EX771462       <-- ATTGCCTCCTAGCAGTCCGGTGGTTGGTGTGCCAGTGAATGGACTGCCAG
EX749836       <-- ATTGCCTCCTAGCAGTCCGGTGGTTGGTGTGCCAGTGAATGGACTGCCAG
EW724141       <-- ATTGCCTCCTAGCAGTCCGGTGGTTGGTGTGCCAGTGAATGGACTGCCAG
FD541229       <-- ATTGCCTCCTAGCAGTCCGGTGGTTGGTGTGCCAGTGAATGGACTGCCAG
EX771357       <-- ATTGCCTCCTAGCAGTCCGGTGGTTGGTGTGCCAGTGAATGGACTGCCAG
EW731409       <-- ATTGCCTCCTAGCAGTCCGGTGGTTGGTGTGCCAGTGAATGGACTGCCAG
FD948709       <-- ATTGCCTCCTAGCAGTCCGGTGGTTGGTGTGCCAGTGAATGGACTGCCAG
FD972216       <-- ATTGCCTCCTAGCAGTCCGGTGGTTGGTGTGCCAGTGAATGGACTGCCAG
FD941080       <-- ....CCTCCTAGCAGTCCGGTGGTTGGTGTGCCAGTGAATGGACTGCCAG
EX773550       <-- ...........GCAGTCCGATGGTTGGTGTGCCAGTGAATGGACTGCCAG
EX747036       <-- ..................................................
EV571471       --> ATTGCCTCCTAGCAGTCCGGTGGTTGGTGTGCCAGTGAATGGACTGCCAG
FD968146       --> ATTGCCTCCTAGCAGTCCGGTGGTTGGTGTGCCAGTGAATGGACTGCCAG
EY919202       --> ATTGCCTCCTAGCAGTCCGGTGGTTGGTGTGCCAGTGAATGGACTGCCAG
EX775499       --> ATTGCCTCCTAGCAGTCCGGTGGTTGGTGTGCCAGTGAATGGACTGCCAG
EV572887       --> ATTGCCTCCTAGCAGTCCGGTGGTTGGTGTGCCAGTGAATGGACTGCCAG
EV573545       --> ATTGCCTCCTAGCAGTCCGGTGGTTGGTGTGCCAGTGAATGGACTGCCAG
EX893665       --> ATTGCCTCCTAGCAGTCCGGTGGTTGGTGTGCCAGTGAATGGACTGCCAG
FD547934       --> ATTGCCTCCTAGCAGTCCGGTGGTTGGTGTGCCAGTGAATGGACTGCCAG
EX775409       --> ATTGCCTCCTAGCAGTCCGGTGGTTGGTGTGCCAGTGAATGGACTGCCAG
EX777350       --> ATTGCCTCCTAGCAGTCCGATGGTTGGTGTGCCAGTGAATGGACTGCCAG
FD944459       --> ATTGCCTCCTAGCAGTCCGGTGGTTGGTGTGCCAGTGAATGGACTGCCAG
EX753427       --> ATTGCCTCCTAACAGTCCGGTGGTTGGTGTGCCAGTGAATGGACTGCCAG
EV545049       --> ATTGCCTCCTAGCAGTCCGGTGGTTGGTGTGCCAGTGAATGGACTGCCAG
EV529671       --> ATTGCCTCCTAGCAGTCCGGTGGTTGGTGTGCCAGTGAATGGACTGCCAG
FD961532       --> ATTGCCTCCTAGCAGTCCGGTGGTTGGTGTGCCAGTGAATGGACTGCCAG
EW728671       --> ATTGCCTCCTAGCAGTCCGGTGGTTGGTGTGCCAGTGAATGGACTGCCAG
FD546488       --> ATTGCCTCCTAACAGTCCGGTGGTTGGTGTGCCAGTGAATGGACTGCCAG
FD537557       --> ..................................................

               351    -    401
UN22975        --> TGTATGGACTGTTTCCACCGGGAAATGTCGTGATAGGGCTGTTTCCCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973989       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549611       <-- TGTATGGACTGTTTCCACCGGGAAATGTCGTGATAGAGTTGTTTCCCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922955       <-- TGTATGGACTGTTTCCACCGGGAAATGTCGTGATAGGGCTGTTTCCCTTT  Raphanus raphanistrum subsp. landra
EV524747       <-- TGTATGGACTGTTTCCACCGGGAAATGTCGTGATAGGGCTGTTTCCCTTT  Raphanus raphanistrum subsp. maritimus
EV568925       <-- TGTATGGACTGTTTCCACCGGGAAATGTCGTGATAGGGCTGTTTCCCTTT  Raphanus raphanistrum subsp. landra
EV568084       <-- TGTATGGACTGTTTCCACCGGGAAATGTCGTGATAGGGCTGTTTCCCTTT  Raphanus raphanistrum subsp. landra
FD552105       <-- TGTATGGACTGTTTCCACCGGGAAATGTCGTGATAGAGTTGTTTCCCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX890073       <-- TGTATGGACTGTTTCCACCGGGAAATGTCGTGATAGGGCTGTTTCCCTTT  Raphanus sativus var. oleiformis
FD965925       <-- TGTATGGACTGTTTCCACCGGGAAATGTCGTGATAGGGCTGTTTCCCTTT  Raphanus raphanistrum subsp. maritimus
FD550546       <-- TGTATGGACTGTTTCCACCGGGAAATGTCGTGATAGAGTTGTTTCCCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724876       <-- TGTATGGACTGTTTCCACCGGGAAATGTCGTGATAGGGCTGTTTCCCTTT  Raphanus sativus cv Early Scarlet Globe
EX771462       <-- TGTATGGACTGTTTCCACCGGGAAATGTCGTGATAGGGCTGTTTCCCTTT  Raphanus raphanistrum subsp. landra
EX749836       <-- TGTATGGACTGTTTCCACCGGGAAATGTCGTGATAGGGCTGTTTCCCTTT  Raphanus raphanistrum subsp. maritimus
EW724141       <-- TGTACGGACTGTTTCCACCGGGAAATGTCGTGATAGGGCTGTTTCCCTTT  Raphanus sativus cv Early Scarlet Globe
FD541229       <-- TGTATGGACTGTTTCCACCGGGAAATGTCGTGATAGAGTTGTTTCCCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX771357       <-- TGTATGGACTGTTTCCACCGGGAAATGTCGTGATAGGGCTGTTTCCCTTT  Raphanus raphanistrum subsp. landra
EW731409       <-- TGTATGGACTGTTTCCACCGGGAAATGTCGTGATAGGGCTGTTTCCCTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD948709       <-- TGTATGGACTGTTTCCACCGGGAAATGTCGTGATAGGGCTGTTTCCCTTT  Raphanus sativus cv Early Scarlet Globe
FD972216       <-- TGTATGGACTGTTTCCACCGGGAAATGTCGTGATAGAGTTGTTTCCCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD941080       <-- TGTATGGACTGTTTCCACCGGGAAATGTCGTGATAGGGCTGTTTCCCTTT  Raphanus sativus var. oleiformis
EX773550       <-- TGTATGGACTGTTTCCACCGGGAAATGTCGTGATAGGGCTGTTTCCCTTT  Raphanus raphanistrum subsp. landra
EX747036       <-- .......................AATGTCGTGATAGGGCTGTTTCCCTTT  Raphanus raphanistrum subsp. maritimus
EV571471       --> TGTATGGACTGTTTCCACCGGGAAATGTCGTGATAGGGCTGTTTCCCTTT  Raphanus raphanistrum subsp. landra
FD968146       --> TGTATGGACTGTTTCCACCGGGAAATGTCGTGATAGAGTTGTTTCCCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919202       --> TGTATGGACTGTTTCCACCGGGAAATGTCGTGATAGGGCTGTTTCCCTTT  Raphanus raphanistrum subsp. landra
EX775499       --> TGTATGGACTGTTTCCACCGGGAAATGTCGTGATAGGGCTGTTTCCCTTT  Raphanus raphanistrum subsp. landra
EV572887       --> TGTATGGACTGTTTCCACCGGGAAATGTCGTGATAGGGCTGTTTCCCTTT  Raphanus raphanistrum subsp. landra
EV573545       --> TGTATGGACTGTTTCCACCGGGAAATGTCGTGATAGGGCTGTTTCCCTTT  Raphanus raphanistrum subsp. landra
EX893665       --> TGTATGGACTGTTTCCACCGGGAAATGTCGTGATAGGGCTGTTTCCCTTT  Raphanus sativus var. oleiformis
FD547934       --> TGTATGGACTGTTTCCACCGGGAAATGTCGTGATAGAGTTGTTTCCCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX775409       --> TGTATGGACTGTTTCCACCGGGAAATGTCGTGATAGGGCTGTTTCCCTTT  Raphanus raphanistrum subsp. landra
EX777350       --> TGTATGGACTGTTTCCACCGGGAAATGTCGTGATAGGGCTGTTTCCCTTT  Raphanus raphanistrum subsp. landra
FD944459       --> TGTATGGACTGTTTCCACCGGGAAATGTCGTGATAGGGCTGTTTCCCTTT  Raphanus sativus cv Early Scarlet Globe
EX753427       --> TGTATGGACTGTTTCCACCGGGAAATGTCGTGATAGGGCTGTTTCCCTTT  Raphanus raphanistrum subsp. maritimus
EV545049       --> TGTATGGACTGTTTCCACCGGGAAATGTCGTGATAGAGTTGTTTCCCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV529671       --> TGTATGGACTGTTTCCACCGGGAAATGTCGTGATAGGGCTGTTTCCCTTT  Raphanus raphanistrum subsp. maritimus
FD961532       --> TGTATGGACTGTTTCCACCGGGAAATGTCGTGATAGGGCTGTTTCCCTTT  Raphanus raphanistrum subsp. maritimus
EW728671       --> TGTACGGACTGTTTCCACCGGGAAATGTCGTGATAGGGCTGTTTCCCTTT  Raphanus sativus cv Early Scarlet Globe
FD546488       --> TGTATGGACTGTTTCCACCGGGAAATGTCGTGATAGAGTTGTTTCCCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537557       --> .............tctACCGGGAAATGTCGTGATAGAGTTGTTTCCCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)

               401    -    451
UN22975        --> GGACTGCTTTTACCTGGCGTCACGGTGCTGCTGCTACCACCTCCAGTGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973989       <-- ..................................................
EV549611       <-- GGACTGCTTTTACCTGGCGTCACGGTGCTGCTGCTACCACCTCCAGTGCC
EY922955       <-- GGACTGCTTTTACCTGGCGTCACGGTGCTGCTGCTACCACCTCCAc....
EV524747       <-- GGACTGCTTTTACCTGGCGTCACGGTGCTGCTGCTACCACCTCCAGTGCC
EV568925       <-- GGACTGCTTTTACCTGGCGTCACGGTGCTGCTGCTACCACCTCCAGTGCC
EV568084       <-- GGACTGCTTTTACCTGGCGTCACGGTGCTGCTGCTACCACCTCCAGTGCC
FD552105       <-- GGACTGCTTTTACCTGGCGTCACGGTGCTGCTGCTACCACCTCCAGTGCC
EX890073       <-- GGACTGCTTTTACCTGGCGTCACGGTGCTGCTGCTACCACCTCCAGTGCC
FD965925       <-- GGACTGCCTTTACCTGGCGTCACGGTGCTGCTGCTACCACCTCCAGTGCC
FD550546       <-- GGACTGCTTTTACCTGGCGTCACGGTGCTGCTGCTACCACCTCCAGTGCC
EW724876       <-- GGACTGCTTTTACCTGGCGTCACGGTGCTGCTGCTACCACCTCCAGTGCC
EX771462       <-- GGACTGCTTTTACCTGGCGTCACGGTGCTGCTGCTACCACCTCCAGTGCC
EX749836       <-- GGACTGCTTTTACCTGGCGTCACGGTGCTGCTGCTACCACCTCCAGTGCC
EW724141       <-- GGACTGCTTTTACCTGGCGTCACGGTGCTGCTGCTACCACCTCCAGTGCC
FD541229       <-- GGACTGCTTTTACCTGGCGTCACGGTGCTGCTGCTACCACCTCCAGTGCC
EX771357       <-- GGACTGCTTCTACCTGGCGTCACGGTGCTGCTGCTACCACCTCCAGTGCC
EW731409       <-- GGACTGCTTTTACCTGGCGTCACGGTGCTGCTGCTACCACCTCCAGTGCC
FD948709       <-- GGACTGCTTTTACCTGGCGTCACGGTGCTGCTGCTACCACCTCCAGTGCC
FD972216       <-- GGACTGCTTTTACCTGGCGTCACGGTGCTGCTGCTACCACCTCCAGTGCC
FD941080       <-- GGACTGCTTTTACCTGGCGTCACGGTGCTGCTGCTACCACCTCCAGTGCC
EX773550       <-- GGACTGCTTTTACCTGGCGTCACGGTGCTGCTGCTACCACCTCCAGTGCC
EX747036       <-- GGACTGCTTTTACCTGGCGTCACGGTGCTGCTGCTACCACCTCCAGTGCC
EV571471       --> GGACTGCTTTTACCTGGCGTCACGGTGCTGCTGCTACCACCTCCAGTGCC
FD968146       --> GGACTGCTTTTACCTGGCGTCACGGTGCTGCTGCTACCACCTCCAGTGCC
EY919202       --> GGACTGCTTTTACCTGGCGTCACGGTGCAGCTGCTACCACCTCCAGTGCC
EX775499       --> GGACTGCTTTTACCTGGCGTCACGGTGCTGCTGCTACCACCTCCAGTGCC
EV572887       --> GGACTGCTTTTACCTGGCGTCACGGTGCTGCTGCTACCACCTCCAGTGCC
EV573545       --> GGACTGCTTTTACCTGGCGTCACGGTGCTGCTGCTACCACCTCCAGTGCC
EX893665       --> GGACTGCTTTTACCTGGCGTCACGGTGCTGCTGCTACCACCTCCAGTGCC
FD547934       --> GGACTGCTTTTACCTGGCGTCACGGTGCTGCTGCTACCACCTCCAGTGCC
EX775409       --> GGACTGCTTCTACCTGGCGTCACGGTGCTGCTGCTACCACCTCCAGTGCC
EX777350       --> GGACTGCTTTTACCTGGCGTCACGGTGCTGCTGCTACCACCTCCAGTGCC
FD944459       --> GGACTGCTTTTACCTGGCGTCACGGTGCTGCTGCTACCACCTCCAGTGCC
EX753427       --> GGACTGCTTTTACCTGGCGTCACGGTGCTGCTGCTACCACCTCCAGTGCC
EV545049       --> GGACTGCTTTTACCTGGCGTCACGGTGCTGCTGCTACCACCTCCAGTGCC
EV529671       --> GGACTGCTTTTACCTGGCGTCACGGTGCTGCTGCTACCACCTCCAGTGCC
FD961532       --> GGACTGCCTTTACCTGGCGTCACGGTGCTGCTGCTACCACCTCCAGTGCC
EW728671       --> GGACTGCTTTTACCTGGCGTCACGGTGCTGCTGCTACCACCTCCAGTGCC
FD546488       --> GGACTGCTTTTACCTGGCGTCACGGTGCTGCTGCTACCACCTCCAGTGCC
FD537557       --> GGACTGCTTTTACCTGGCGTCACGGTGCTGCTGCTACCACCTCCAGTGCC

               451    -    501
UN22975        --> ACTAACACTAGAAGGGAATGGACATCCTGAATAGCTGGGATCAGTGGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973989       <-- ..................................................
EV549611       <-- ACTAACACTAGAAGGGAATGGACATCCTGAATAGCTGGGATCAGTGGTGG
EY922955       <-- ..................................................
EV524747       <-- ACTAACACTAGAAGGGAATGGACATCCTGAATAGCTGGGATCAGTGGTGG
EV568925       <-- ACTAACACTAGAAGGGAATGGACATCCTGAATAGCTGGGATCAGTGGTGG
EV568084       <-- ACTAACACTAGAAGGGAATGGACATCCTGAATAGCTGGGATCAGTGGTGG
FD552105       <-- ACTAACACTAGAAGGGAATGGACATCCTGAATAGCTGGGATCAGTGGTGG
EX890073       <-- ACTAACACTAGAAGGGAATGGACGTCCTGAATAGCTGGGATCAGTGGTGG
FD965925       <-- ACTAACACTAGAAGGGAATGGACATCCTGAATAGCTGGGATCAGTGGTGG
FD550546       <-- ACTAACACTAGAAGGGAATGGACATCCTGAATAGCTGGGATCAGTGGTGG
EW724876       <-- ACTAACACTAGAAGGGAATGGACATCCTGAATAGCTGGGATCAGTGGTGG
EX771462       <-- ACTAACACTAGAAGGGAATGGACATCCTGAATAGCTGGGATCAGTGGTGG
EX749836       <-- ACTAACACTAGAAGGGAATGGACATCCTGAATAGCTGGGATCAGTGGTGG
EW724141       <-- ACTAACACTAGAAGGGAATGGACATCCTGAATAGCTGGGATCAGTGGTGG
FD541229       <-- ACTAACACTAGAAGGGAATGGACATCCTGAATAGCTGGGATCAGTGGTGG
EX771357       <-- ACTAACACTAGAAGGGAATGGACATCCTGAATAGCTGGGATCAGTGGTGG
EW731409       <-- ACTAACACTAGAAGGGAATGGACATCCTGAATAGCTGGGATCAGTGGTGG
FD948709       <-- ACTAACACTAGAAGGGAATGGACATCCTGAATAGCTGGGATCAGTGGTGG
FD972216       <-- ACTAACACTAGAAGGGAATGGACATCCTGAATAGCTGGGTTCAGTGGTGG
FD941080       <-- ACTAACACTAGAAGGGAATGGACATCCTGAATAGCTGGGATCAGTGGTGG
EX773550       <-- ACTAACACTAGAAGGGAATGGACATCCTGAATAGCTGGGATCAGTGGTGG
EX747036       <-- ACTAACACTAGAAGGGAATGGACATCCTGAATAGCTGGGATCAGTGGTGG
EV571471       --> ACTAACACTAAAAGGGAATGGACATCCTGAATAGCTGGGATCAGTGGTGG
FD968146       --> ACTAACACTAGAAGGGAATGGACATCCTGAATAGCTGGGTTCAGTGGTGG
EY919202       --> ACTAACACTAGAAGGGAATGGACATCCTGAATAGCTGGGATCAGTGGTGG
EX775499       --> ACTAACACTAAAAGGGAATGGACATCCTGAATAGCTGGGATCAGTGGTGG
EV572887       --> ACTAACACTAGAAGGGAATGGACATCCTGAATAGCTGGGATCAGTGGTGG
EV573545       --> ACTAACACTAGAAGGGAATGGACATCCTGAATAGCTGGGATCAGTGGTGG
EX893665       --> ACTAACACTAGAAGGGAATGGACGTCCTGAATAGCTGGGATCAGTGGTGG
FD547934       --> ACTAACACTAGAAGGGAATGGACATCCTGAATAGCTGGGATCAGTGGTGG
EX775409       --> ACTAACACTAGAAGGGAATGGACATCCTGAATAGCTGGGATCAGTGGTGG
EX777350       --> ACTAACACTAGAAGGGAATGGACATCCTGAATAGCTGGGATCAGTGGTGG
FD944459       --> ACTAACACTAGAAGGGAATGGACATCCTGAATAGCTGGGATCAGTGGTGG
EX753427       --> ACTAACACTAAAAGGGAATGGACATCCTGAATAGCTGGGATCAGTGGTGG
EV545049       --> ACTAACACTAGAAGGGAATGGACATCCTGAATAGCTGGGATCAGTGGTGG
EV529671       --> ACTAACACTAGAAGGGAATGGACATCCTGAATAGCTGGGATCAGTGGTGG
FD961532       --> ACTAACACTAGAAGGGAATGGACATCCTGAATAGCTGGGATCAGTGGTGG
EW728671       --> ACTAACACTAGAAGGGAATGGACATCCTGAATAGCTGGGATCAGTGGTGG
FD546488       --> ACTAACACTAGAAGGGAATGGACATCCTGAATAGCTGGGATCAGTGGTGG
FD537557       --> ACTAACACTAGAAGGGAATGGACATCCTGAATAGCTGGGATCAGTGGTGG

               501    -    551
UN22975        --> TAGGAGTGGCAGTACCAGTGAAGTTACAAGACTCAGAAGCTTGACTTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973989       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549611       <-- TAGGAGTGGCAGTACCAGTGAAGTTACAAGACTCAGAAGCTTGCCTTTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922955       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV524747       <-- TAGGAGTGGCAGTACCAGTGAAGTTACAAGACTCAGAAGCTTGACTTTTC  Raphanus raphanistrum subsp. maritimus
EV568925       <-- TAGGAGTGGCAGTACCAGTGAAGTTACAAGACTCAGAAGCTTGACTTTTC  Raphanus raphanistrum subsp. landra
EV568084       <-- TAGGAGTGGCAGTACCAGTGAAGTTACAAGACTCAGAAGCTTGACTTTTC  Raphanus raphanistrum subsp. landra
FD552105       <-- TAGGAGTGGCAGTACCAGTGAAGTTACAAGACTCAGAAGCTTGCCTTTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX890073       <-- TAAGAGTGGCAGTACCAGTGAAGTTACAAGACTCAGAAGCTTGACTTTTC  Raphanus sativus var. oleiformis
FD965925       <-- TAGGAGTGGCAGTACCAGTGAAGTTACAAGACTCAGAAGCTTGACTTTTC  Raphanus raphanistrum subsp. maritimus
FD550546       <-- TAGGAGTGGCAGTACCAGTGAAGTTACAAGACTCAGAAGCTTGCCTTTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724876       <-- TAGGAGTGGCAGTACCAGTGAAGTTACAAGACTCAGGAGCTTGACTTTTC  Raphanus sativus cv Early Scarlet Globe
EX771462       <-- TAGGAGTGGCAGTACCAGTGAAGTTACAAGACTCAGAAGCTTGACTTTTC  Raphanus raphanistrum subsp. landra
EX749836       <-- TAGGAGTGGCAGTACCAGTGAAGTTACAAGACTCAGAAGCTTGACTTTTC  Raphanus raphanistrum subsp. maritimus
EW724141       <-- TAGGAGTGGCAGTACCAGTGAAGTTACAAGACTCAGAAGCTTGACTTTTC  Raphanus sativus cv Early Scarlet Globe
FD541229       <-- TAGGAGTGGCAGTACCAGTGAAGTTGCAAGACTCAGAAGCTTGACCTTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX771357       <-- TAGGAGTGGCAGTATCAGTGAAGTTACAAGACTCAGAAGCTTGACTTTTC  Raphanus raphanistrum subsp. landra
EW731409       <-- TAGGAGTGGCAGTACCAGTGAAGTTACAAGACTCAGAAGCTTGACTTTTC  Raphanus sativus cv Rat-Tail Radish #3870
FD948709       <-- TAGGAGTGGCAGTACCAGTGAAGTTACAAGACTCAGAAGCTTGACTTTTC  Raphanus sativus cv Early Scarlet Globe
FD972216       <-- TAGGAGTGGCAGTACCAGTGAAGTTACAAGACTCAGAAGCTTGCCTTTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD941080       <-- TAAGAGTGGCAGTACCAGTGAAGTTACAAGACTCAGAAGCTTGACTTTTC  Raphanus sativus var. oleiformis
EX773550       <-- TAGGAGTGGCAGTACCAGTGAAGTTACAAGACTCAGAAGCTTGACTTTTC  Raphanus raphanistrum subsp. landra
EX747036       <-- TAGGAGTGGCAGTACCAGTGAAGTTACAAGACTCAGAAGCTTGACTTTTC  Raphanus raphanistrum subsp. maritimus
EV571471       --> TAGGAGTGGCAGTACCAGTGAAGTTCCAAGACTCAAAAGCTTGACTTTTC  Raphanus raphanistrum subsp. landra
FD968146       --> TAGGAGTGGCAGTACCAGTGA.............................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919202       --> TAGGAGTGGCAGTACCAGTGAAGTT.........................  Raphanus raphanistrum subsp. landra
EX775499       --> TAGGAGTGGCAGTACCAGTGAAGTTACAAGACTCAAAAGCTTGACTTTTC  Raphanus raphanistrum subsp. landra
EV572887       --> TAGGAGTGGCAGTACCAGTGAAGTTACAAGACTCAGAAGCTTGACTTTTC  Raphanus raphanistrum subsp. landra
EV573545       --> TAGGAGTGGCAGTACCAGTGAAGTTACAAGACTCAGAAGCTTGACTTTTC  Raphanus raphanistrum subsp. landra
EX893665       --> TAAGAGTGGCAGTACCAGTGAAGTTACAAGACTCAGAAGCTTGACTTTTC  Raphanus sativus var. oleiformis
FD547934       --> TAGGAGTGGCAGTACCAGTGAAGTTACAAGACTCAGAAGCTTGCCTTTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX775409       --> TAGGAGTGGCAGTATCAGTGAAGTTACAAGACTCAGAAGCTTGACTTTTC  Raphanus raphanistrum subsp. landra
EX777350       --> TAGGAGTGGCAGTACCAGTGAAGTTACAAGACTCAGAAGCTTGACTTTTC  Raphanus raphanistrum subsp. landra
FD944459       --> TAGGAGTGGCAGTACCAGTGAAGTTACAAGACTCAGAAGCTTGACTTTTC  Raphanus sativus cv Early Scarlet Globe
EX753427       --> TAGGAGTGGCAGTACCAGTGAAGTTACAAGACTCAAAAGCTTGACTTTTC  Raphanus raphanistrum subsp. maritimus
EV545049       --> TAGGAGTGGCAGTACCAGTGAAGTTACAAGACTCAGAAGCTTGCCTTTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV529671       --> TAGGAGTGGCAGTACCAGTGAAGTTACAAGACTCAGAAGCTTGACTTTTC  Raphanus raphanistrum subsp. maritimus
FD961532       --> TAGGAGTGGCAGTACCAGTGAAGTTACAAGACTCAGAAGCTTGACTTTTC  Raphanus raphanistrum subsp. maritimus
EW728671       --> TAGGAGTGGCAGTACCAGTGAAGTTACAAGACTCAGAAGCTTGACTTTTC  Raphanus sativus cv Early Scarlet Globe
FD546488       --> TAGGAGTGGCAGTACCAGTGAAGTTAC.......................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537557       --> TAGGAGTGGCAGTACCAGTGAAGTTGCAAGACTCAGAAGCTTGACCTTTC  Raphanus raphanistrum subsp. raphanistrum (MS)

               551    -    601
UN22975        --> TTCTGAAAGAAGCTATTGACAGCATAGTTACAATGAGCTCTAACATTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973989       <-- ..................................................
EV549611       <-- TTCTGAAAGAAGCTATTGACAGCATAGTTACAATGAGCTCTAACATTGTC
EY922955       <-- ..................................................
EV524747       <-- TTCTGAAAGAAGCTATTGACAGCATAGTTACAATGAGCTCTAACATTGTC
EV568925       <-- TTCTGAAAGAAGCTATTGACAGCATAGTTACAATGAGCTCTAACATTGTC
EV568084       <-- TTCTGAAAGAAGCTATTGACAGCATAGTTACAATGAGCTCTAACATTGTC
FD552105       <-- TTCTGAAAGAAGCTATTGACAGCATAGTTACAATGAGCTCTAACATTGTC
EX890073       <-- TTCTGAAAGAAGCTATTGACAGCATAGTTACAATGAGCTCTAACATTGTC
FD965925       <-- TTCTGAAAGAAGCTATTGACAGCATAGTTACAATGAGCTCTAACATTGTC
FD550546       <-- TTCTGAAAGAAGCTATTGACAGCATAGTTACAATGAGCTCTAACATTGTC
EW724876       <-- TTCTGAAAGAAGCTATTGACAGCATAGTTACAATGAGCTCTAACATTGTC
EX771462       <-- TTCTGAAAGAAGCTATTGACAGCATAGTTACAATGAGCTCTAACATTGTC
EX749836       <-- TTCTGAAAGAAGCTATTGACAGCATAGTTACAATGAGCTCTAACATTGTC
EW724141       <-- TTCTGAAAGAAGCTATTGACAGCATAGTTACAATGAGCTCTAACATTGTC
FD541229       <-- TCCTGAAAGAAGCTATTGACAGCATAGTTACAATGAGCTCTAACATTGTC
EX771357       <-- TTCTGAAAGAAGCTATTGACAGCATAGTTACAATGAGC............
EW731409       <-- TTCTGAAAGAAGCTATTGACAGCATAGTTACAATGAGCTCTAACATTGTC
FD948709       <-- TTCTGAAAGAAGCTATTGACAGCATAGTTACAATGAGCTCTAACATTGTC
FD972216       <-- TTCTGAAAGAAGCTATTGACAGCATAGTTACAATGCGCTCTAACATTGTC
FD941080       <-- TTCTGAAAGAAGCTATTGACAGCATAGTTACAATGAGCTCTAACATTGTC
EX773550       <-- TTCTGAAAGAAGCTATTGACAGCATAGTTACAATGAGCTCTAACATTGTC
EX747036       <-- TTCTGAGAGAAGCTATTGACAGCATAGTTACAATGAGCTCTAACATTGTC
EV571471       --> TTCTGAAAGAAGCTATTGACAGCATAGTTACAATGAGCTCTAACATTGTC
FD968146       --> ..................................................
EY919202       --> ..................................................
EX775499       --> TTCTGAAAGAAGCTATTGACAGCATAGTTACAATGAGCTCTAACATTGTC
EV572887       --> TTCTGAAAGAAGCTATTGACAGCATAGTTACAATGAGCTCTAACATTGTC
EV573545       --> TTCTGAAAGAAGCTATTGACAGCATAGTTACAATGAGCTCTAACATTGTC
EX893665       --> TTCTGAAAGAAGCTATTGACAGCATAGTTACAATGAGCTCTAACATTGTC
FD547934       --> TTCTGAAAGAAGCTATTGACAGCATAGTTACAATGAGCTCTAACATTGTC
EX775409       --> TTCTGAAAGAAGCTATTGACAGCATAGTTACAATGAGCTCTAACATTGTC
EX777350       --> TTCTGAAAGAAGCTATTGACAGCATAGTTACAATGAGCTCTAACATTGTC
FD944459       --> TTCTGAAAGAAGCTATTGACAGCATAGTTACAATGAGCTCTAACATTGTC
EX753427       --> TTCTGAAAGAAGCTATTGACAGCATAGTTACAATGAGCTCTAACATTGTC
EV545049       --> TTCTGAAAGAAGCTATTGACAGCATAGTTACAATGAGCTCTAACATTGTC
EV529671       --> TTCTGAAAGAAGCTATTGACAGCATAGTTACAATGAGCTCTAACATTGTC
FD961532       --> TTCTGAAAGAAGCTATTGACAGCATAGTTACAATGAGCTCTAACATTGTC
EW728671       --> TTCTGAAAGAAGCTATTGACAGCATAGTTACAATGAGCTCTAACATTGTC
FD546488       --> ..................................................
FD537557       --> TCCTGAAAGAAGCTATTGACAGCATAGTTACAATGAGCTCTAACATTGTC

               601    -    651
UN22975        --> AGGGTTAAAGCAAGACCCTTTTGGGTGAGTTGGGTTACAGTCAGCTCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973989       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549611       <-- AGGGTTGAAGCAAGACCCTTTTGGGTGAGTTGGGTTACAGTCAGCTCCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922955       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV524747       <-- AGGGTTAAAGCAAGACCCTTTTGGGTGAGTTGGGTTACAGTCAGCTCCAT  Raphanus raphanistrum subsp. maritimus
EV568925       <-- AGGGTTAAAGCAAGACCCTTTTGGGTGAGTTGGGTTACAGTCAGCTCCAT  Raphanus raphanistrum subsp. landra
EV568084       <-- AGGGTTAAAGCAAGACCCTTTTGGGTGAGTTGGGTTACAGTCAGCTCCAT  Raphanus raphanistrum subsp. landra
FD552105       <-- AGGGTTGAAGCAAGACCCTTTTGGGTGAGTCGGGTTACAGTCAGCTCCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX890073       <-- AGG-TTAAAGCAAGACCCTTTTGGGTGAGTTGGGTTACAGTCAGCTCCAT  Raphanus sativus var. oleiformis
FD965925       <-- AGGGTTAAAGCAAGACCCTTTTGGGTGAGTTGGGTTACAGTCAGCTCCAT  Raphanus raphanistrum subsp. maritimus
FD550546       <-- AGGGTTGAAGCAAGACCCTTTTGGGTGAGTTGGGTTACAGTCAGCTCCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724876       <-- AGGGTTAAAGCAAGACCCTTTTGGGTGAGTTGGGTTACAGTCAGCTCCAT  Raphanus sativus cv Early Scarlet Globe
EX771462       <-- AGGGTTAAAGCAAGACCCTTTTGGGTGAGTTGGGTTACAGTCAGCTCCAT  Raphanus raphanistrum subsp. landra
EX749836       <-- AGGGT-AAAGCAAGACCCTTTTGGGTGTGTTGGGTTACAGTCAGCTCCAT  Raphanus raphanistrum subsp. maritimus
EW724141       <-- AGGGTTAAAGCAAGACCCTTTTGGGTGAGTTGGGTTACAGTCAGCTCCAT  Raphanus sativus cv Early Scarlet Globe
FD541229       <-- AGGGTTGAAGCAAGACCCTTTTGGGTGAGTTGGGTTACAGTCAGCTCCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX771357       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW731409       <-- AGGGTTAAAGCAAGACCCTTTTGGGTGAGTTGGGTTACAGTCAGCTCCAT  Raphanus sativus cv Rat-Tail Radish #3870
FD948709       <-- AGGGTTAAAGCAAGACCCTTTTGGGTGAGTTGGGTTACAGTCAGCTCCAT  Raphanus sativus cv Early Scarlet Globe
FD972216       <-- AGGGTTGAAGCAAGACCCTTTTGGGTGAGTTGGGTTACAGTCAGCTCCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD941080       <-- AGGGTTAAAGCAAGACCCTTTTGGGTGAGTTGGGTTACAGTCAGCTCCAT  Raphanus sativus var. oleiformis
EX773550       <-- AGGGTTAAAGCAAGACCCTTTTGGGTGAGTTGGGTTACAGTCAGCTCCAT  Raphanus raphanistrum subsp. landra
EX747036       <-- AGGGTTAAAGCAAGACCCTTTTGGGTGAGTTGGGTTACAGTCAGCTCCAT  Raphanus raphanistrum subsp. maritimus
EV571471       --> AGGGTTAAAGCAAGACCCTTTTGGGTGAGTTGGGTTACAGTCAGCTCCAT  Raphanus raphanistrum subsp. landra
FD968146       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919202       --> ..................................................  Raphanus raphanistrum subsp. landra
EX775499       --> AGGGTTAAAGCAAGACCCTTTTGGGTGAGTTGGGTTACAGTCAGCTCCAT  Raphanus raphanistrum subsp. landra
EV572887       --> AGGGTTAAAGCAAGACCCTTTTGGGTGAGTTGGGTTACAGTCAGCTCCAT  Raphanus raphanistrum subsp. landra
EV573545       --> AGGGTTAAAGCAAGACCCTTTTGGGTGAGTTGGGTTACAGTCAGCTCCAT  Raphanus raphanistrum subsp. landra
EX893665       --> AGG-TTAAAGCAAGACCCTTTTGGGTGAGTTGGGTTACAGTCAGCTCCAT  Raphanus sativus var. oleiformis
FD547934       --> AGGGTTGAAGCAAGACCCTTTTGGGTGAGTCGGGTTACAGTCAGCTCCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX775409       --> AGGGTTAAAGCAAGACCCTTTTGGGTGAGTTGGGTTACAGTCAGCTCCAT  Raphanus raphanistrum subsp. landra
EX777350       --> AGGGTTAAAGCAAGACCCTTTTGGGTGAGTTGGGTTACAGTCAGCTCCAT  Raphanus raphanistrum subsp. landra
FD944459       --> AGGGTTAAAGCAAGACCCTTTTGGGTGAGTTGGGTTACAGTCAGCTCCAT  Raphanus sativus cv Early Scarlet Globe
EX753427       --> AGGGT-AAAGCAAGACCCTTTTGGGTGTGTTGGGTTACAGTCAGCTCCAT  Raphanus raphanistrum subsp. maritimus
EV545049       --> AGGGTTGAAGCAAGACCCTTTTGGGTGAGTTGGGTTACAGTCAGCTCCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV529671       --> AGGGTTAAAGCAAGACCCTTTTGGGTGAGTTGGGTTACAGTCAGCTCCAT  Raphanus raphanistrum subsp. maritimus
FD961532       --> AGGGTTAAAGCAAGACCCTTTTGGGTGAGTTGGGTTACAGTCAGCTCCAT  Raphanus raphanistrum subsp. maritimus
EW728671       --> AGGGTTAAAGCAAGACCCTTTTGGGTGAGTTGGGTTACAGTCAGCTCCAT  Raphanus sativus cv Early Scarlet Globe
FD546488       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537557       --> AGGGTTGAAGCAAGACCCTTTTGGGTGAGTTGGGTTACAGTCAGCTCCAT  Raphanus raphanistrum subsp. raphanistrum (MS)

               651    -    701
UN22975        --> TTCCACAAGCATAGTCTAGTGTCCTTTGGAGCACTGAGTCACTCAGCCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973989       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549611       <-- TTCCACAAGCATAGTCCAATGTCCTTTGTAGCACTGAGTCACCCAGCCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922955       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV524747       <-- TTCCACAAGCATAGTCTAGTGTCCTTTGGAGCACTGAGTCACTCAGCCCT  Raphanus raphanistrum subsp. maritimus
EV568925       <-- TTCCACAAGCATAGTCTAGTGTCCTTTGGAGCACTGAGTCACTCAGCCCT  Raphanus raphanistrum subsp. landra
EV568084       <-- TTCCACAAGCATAGTCTAGTGTCCTTTGGAGCACTGAGTCACTCAGCCCT  Raphanus raphanistrum subsp. landra
FD552105       <-- TTCCACAAGCATAGTCCAATGTCCTTTGTAGCACTGAGTCACTCAGCCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX890073       <-- TTCCACAAGCATAGTCTAGTGTCCTTTGGAGCACTGAGTCACTCAGCCCT  Raphanus sativus var. oleiformis
FD965925       <-- TTCCACAAGCATAGTCTAGTGTCCTTTGGAGCACTGAGTCACTCAGCCCT  Raphanus raphanistrum subsp. maritimus
FD550546       <-- TTCCACAAGCATAGTCCAATGTCCTTTGTAGCACTGAGTCACTCAGCCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724876       <-- TTCCACAAGCATAGTCTAGTGTCCTTTGGAGCACTGAGTCACTCAGCCCT  Raphanus sativus cv Early Scarlet Globe
EX771462       <-- TTCCACAAGCATAGTCTAGTGTCCTTTGGAGCACTGAGTCACTCAGCCCT  Raphanus raphanistrum subsp. landra
EX749836       <-- TTCCACAAGCATAGTCTAGTGTCCTTTGGAGCACTGAGTCACTCAGCCCT  Raphanus raphanistrum subsp. maritimus
EW724141       <-- TTCCACAAGCATAGTTTAGTGTCCTTTGGAGCACTGAGTCACTCAGCCCT  Raphanus sativus cv Early Scarlet Globe
FD541229       <-- TTCCACAAGCATAGTCCAATGCCCTTTGGAGCACTGAGTCACTCAGCCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX771357       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW731409       <-- TTCCACAAGCATAGTCTAGTGTCCTTTGGAGCACTGAGTCACTCAGCCCT  Raphanus sativus cv Rat-Tail Radish #3870
FD948709       <-- TTCCACAAGCATAGTCTAGTGTCCTTTGGAGCACTGAGTCACTCAGCCCT  Raphanus sativus cv Early Scarlet Globe
FD972216       <-- TTCCACAAGCATAGTCTAGTGTCCTTTGGAGCACTGAGTCACTCAGCCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD941080       <-- TTCCACAAGCATAGTCTAGTGTCCTTTGGAGCACTGAGTCACTCAGCCCT  Raphanus sativus var. oleiformis
EX773550       <-- TTCCACAAGCATAGTCTAGTGTCCTTTGGAGCACTGAGTCACTCAGCCCT  Raphanus raphanistrum subsp. landra
EX747036       <-- TTCCACAAGCATAGTCTAGTGTCCTTTGGAGCACTGAGTCACTCAGCCCT  Raphanus raphanistrum subsp. maritimus
EV571471       --> TTCCACAAGCATAGTCTAGTGTCCTTTGGAGCACTGAGTCACTCAGCCCT  Raphanus raphanistrum subsp. landra
FD968146       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919202       --> ..................................................  Raphanus raphanistrum subsp. landra
EX775499       --> TTCCACAAGCATAGTCTAGTGTCCTTTGGAGCACTGAGTCACTCAGCCCT  Raphanus raphanistrum subsp. landra
EV572887       --> TTCCACAAGCATAGTCTAGTGTCCTTTGGAGCACTGAGTCACTCAGCCCT  Raphanus raphanistrum subsp. landra
EV573545       --> TTCCACAAGCATAGTCTAGTGTCCTTTGGAGCACTGAGTCACTCAGCCCT  Raphanus raphanistrum subsp. landra
EX893665       --> TTCCACAAGCATAGTCTAGTGTCCTTTGGAGCACTGAGTCACTCAGCCCT  Raphanus sativus var. oleiformis
FD547934       --> TTCCACAAGCATAGTCCAATGTCCTTTGTAGCACTGAGTCACTCAGCCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX775409       --> TTCCACAAGCATAGTCTAGTGTCCTTTGGAGCACTGAGTCACTCAGCCCT  Raphanus raphanistrum subsp. landra
EX777350       --> TTCCACAAGCATAGTCTAGTGTCCTTTGGAGCACTGAGTCACTCAGCCCT  Raphanus raphanistrum subsp. landra
FD944459       --> TTCCACAAGCATAGTCTAGTGTCCTTTGGAGCACTGAGTCACTCAGCCCT  Raphanus sativus cv Early Scarlet Globe
EX753427       --> TTCCACAAGCATAGTCTAGTGTCCTTTGGAGCAC................  Raphanus raphanistrum subsp. maritimus
EV545049       --> TTCCACAAGCATAGTCCAATGTCCTTTGTAGCACTGAGTCACCCAGCCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV529671       --> TTCCACAAGCATAGTCTAGTGTCCTTTGGAGCACTGAGTCACTCAGCCCT  Raphanus raphanistrum subsp. maritimus
FD961532       --> TTCCACAAGCATAGTCTAGTGTCCTTTGGAGCACTGAGTCACTCAGCCCT  Raphanus raphanistrum subsp. maritimus
EW728671       --> TTCCACAAGCATAGTTTAGTGTCCTTTGGAGCACTGAGTCACTCAGCCCT  Raphanus sativus cv Early Scarlet Globe
FD546488       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537557       --> TTCCACAAGCATAGTCCAATGCCCTTTGG.....................  Raphanus raphanistrum subsp. raphanistrum (MS)

               701    -    751
UN22975        --> GTTTTGCACACACACCATGTGGCGCTACAATGGCCAGCCATGAGGAGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973989       <-- ..................................................
EV549611       <-- GTTTTGCACACACACCATGTGGCGCTACAATGGCCAGCCATGAGGAGACT
EY922955       <-- ..................................................
EV524747       <-- GTTTTGCACACACACCATGTGGCGCTACAATGGCCAGCCATGAGc.....
EV568925       <-- GTTTTGCACACACACCATGTGGCGCTACAATGGCCAGCCATGAGGAGACT
EV568084       <-- GTTTTGCACACACACCATGTGGCGCTACAATGGCCAGCCATGAGGAGACT
FD552105       <-- GTTTTGCACACACACCATGTGGCGCTACAATGGCCAGCCATGAGGAGACT
EX890073       <-- GTTTTGCACACACACCATGTGGCGCTACAATGGCCAGCCATGAGGAGACT
FD965925       <-- GTTTTGCACACACACCATGTGGCGCTACAATGGCCAGCCATGAGGAGACT
FD550546       <-- GTTTTGCACACACACCATGTGGCGCTACAATGGCCAGCCATGAGGAGACT
EW724876       <-- GTTTTGCACACACACCATGTGGCGCTACAATGGCCAGCCATGAGGAGACT
EX771462       <-- GTTTTGCACACACACCATGTGGCGCTACAATGGCCAGCCATGAGGAGACT
EX749836       <-- GTTTTGCACACACACCATGTGGCGCTACAATGGCCAGCCATGAGGAGACT
EW724141       <-- GTTTTGCACACACACCATGTGGCGCTACAATGGCCAGCCATGAGGAGACT
FD541229       <-- GTTTTGCACACACACCATGTGGCGCTACAATGGCCAGCCATGAGGAGACT
EX771357       <-- ..................................................
EW731409       <-- GTTTTGCACGCACACCATGTGGCGCTACAATGGCCAGCCATGAGGAGACT
FD948709       <-- GTTTTGCACACACACCATGTGGCGCTACAATGGCCAGCCATGAGGAGACT
FD972216       <-- GTTTTGCACACACACCATGTGGCGCTACAATGACCAGCCATGAGGAGACT
FD941080       <-- GTTTTGCACACACACCATGTGGCGCTACAATGGCCAGCCATGAGGAGACT
EX773550       <-- GTTTTGTACACACACCATGTGGCGCTACAATGGCCAGCCATGAGGAGACT
EX747036       <-- GTTTTGCACACACACCATGTGGCGCTACAATGGCCAGCCATGAGGAGACT
EV571471       --> GTTTTGCACACACACCATGTGGCGCTACAATGGCCAGCCATGAGGAGACT
FD968146       --> ..................................................
EY919202       --> ..................................................
EX775499       --> GTTTTGCACACACACCATGTGGCGCTACAATGGCCAGCCATGAGGAGACT
EV572887       --> GTTTTGCACACACACCATGTGGCGCTACAATGGCCAGCCATGAGGAGACT
EV573545       --> GTTTTGCACACACACCATGTGGCGCTACAATGGCCAGCCATGAGGAGACT
EX893665       --> GTTTTGCACACACACCATGTGGCGCTACAATGGCCAGCCATGAGGAGACT
FD547934       --> GTTTTGCACACACACCATGTGGCGCTACAATGGCCAGCCA..........
EX775409       --> GTTTTGCACACACACCATGTGGCGCTACAATGGCCAGCCATGAGGAGACT
EX777350       --> GTTTTGTACACACACCATGTGGCGCTACAATGGCCAGCCA..........
FD944459       --> GTTTTGCACACACACCATGTGGCGCTACAAT...................
EX753427       --> ..................................................
EV545049       --> GTTTTGCACACACACCATGTGGCGCTACAATGGCCAGCCATGAGGAGACT
EV529671       --> GTTTTGCACACACACCATGTGGCGCTACAATGGCCAGCCATGAGc.....
FD961532       --> GTTTTGCACACACACCATGTGGCGCTACAATGGCCAGCCATGAGGAGACT
EW728671       --> GTTTTGCACACACACCATGTGGCGCTACAATGGCCAGCCATGAGGAGACT
FD546488       --> ..................................................
FD537557       --> ..................................................

               751    -    801
UN22975        --> GAGAAGATAGAGAAACAGAACAGCCATGAGGGGAATGCAGATACACAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973989       <-- ..................................................
EV549611       <-- GAGAAGATAGAGAAACAGAACAGCCATGAGAGGAATGCAGATACACAAAT
EY922955       <-- ..................................................
EV524747       <-- ..................................................
EV568925       <-- GAGAAGATAGAGAA--AGAACAGCCATGAGGGGAATGCAGATACACAAAT
EV568084       <-- GAGAAGATAGAGAA--AGAACAGCCATGAGGGGAATGCAGATACACAAAT
FD552105       <-- GAGAAGATAGAGAAACAGAACAGCCATGAGAGGAATGCAGATACACAAAT
EX890073       <-- GAGAAGATAGAGAAACAGAACAGCCATGAGGGGAATGCAGATACACAAAT
FD965925       <-- GAGAAGATAGAGAAACAGAACAGCCATGAGGGGAATGCAGATACACAAAT
FD550546       <-- GAGAAGATAGAGAAACAGAACAGCCATGAGAGGAATGCAGATACACAAAT
EW724876       <-- GAGAAGATAGAGAAACAGAACAGCCATGAGGGGAATGCGGATACACAAAT
EX771462       <-- GAGAAGATAGAGAAACAGAACAGCCATGAGGGGAATGCAGATACACAAAT
EX749836       <-- GAGAAGATAGAGAAACAGAACAGCCATGAGGGGAATGCAGATACACAAAT
EW724141       <-- GAGAAGATAGAGAAACAGAACAGCCATGAGGGGAATGCAGATACACAAAT
FD541229       <-- GAGAAGATAGAGAAACAGAACAGCCATGAAGGGAATGCAGATACACAAAT
EX771357       <-- ..................................................
EW731409       <-- GAGAAGATAGAGAAACAGAACAGCCATGAGGGGAATGCAGATACACAAAT
FD948709       <-- GAGAAGATAGAGAAACAGAACAGCCATGAGGGGAATGCAGATACACAAAT
FD972216       <-- GAGAAGATAGAGAAACAGAACAGCCATGAAGGGAATGCAGATACACAAAT
FD941080       <-- GAGAAGATAGAGAAACAGAACAGCCATGAGGGGAATGCAGATACACAAAT
EX773550       <-- GAGAAGATAGAGAAACAGAACAGCCATGAGGGGAATGCAGATACACAAAT
EX747036       <-- GAGAAGATAGAGAAACAGAACAGCCATGAGGGGAATGCAGATACACAAAT
EV571471       --> GAGAAGATAGAGAAAC..................................
FD968146       --> ..................................................
EY919202       --> ..................................................
EX775499       --> GA................................................
EV572887       --> GAGAAGATAGAGAAA--GAACAGCCATGAGGGGAATGCAGATACACAAAT
EV573545       --> GAGAAGATAGAGAAA--GAACAGCCA........................
EX893665       --> GAGAAGATAGAGAAACAGAACAGCCATGAGGGGAATGCAGATACACAAAT
FD547934       --> ..................................................
EX775409       --> GAGAAGATAGAGAAACAGAACAGCCATGAGGGGAATGCAGATACAC....
EX777350       --> ..................................................
FD944459       --> ..................................................
EX753427       --> ..................................................
EV545049       --> GAGAAGATAGAGAAACAGAACAGCCATGAGAGGAATGCAGATACACAAAT
EV529671       --> ..................................................
FD961532       --> GAGAAGATAGAGAAA...................................
EW728671       --> GAGAAGATAGAGAAACAGAACAGCCATGAGGGGAATGCAGATACACAAAT
FD546488       --> ..................................................
FD537557       --> ..................................................

               801    -    851
UN22975        --> GTTCACTGTTGATTAGTCGAAACAGAGAGGGATAGATTATAGAGAGATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973989       <-- ..................................................
EV549611       <-- GTTCACTGTTcc......................................
EY922955       <-- ..................................................
EV524747       <-- ..................................................
EV568925       <-- GTTCACTGTTGATTAGTCcc..............................
EV568084       <-- GTTCACTGTTGATTAGTCcc..............................
FD552105       <-- GTTCGCTGTTGATTAGTCGAAACAGAGAGGGATcc...............
EX890073       <-- GTTCACTGTTGATTAGTCGAAACAGAGAGGGATAGATTATAGAGAGATcc
FD965925       <-- GTTCACTGTTGATTAGTCGAAACAGAGGGGGATAGATTATAGAAAGATGA
FD550546       <-- GTTCACTGTTGATTAGTCGAAACAGAGAGGGATAGATTcc..........
EW724876       <-- GTTCACTGTTGATTAGTCGAAACAGAGAGGGATAGATTATAGAGAGATGA
EX771462       <-- GTTCACTGTTGATTAGTCGAAACAGAGAGGGATAGATTATAGAGAGATGA
EX749836       <-- GTTCACTGTTGATTAGTCGAAACAGAGAGGGATAGATTATAGAGAGATGA
EW724141       <-- GTTCACTcc.........................................
FD541229       <-- GTTCACTGTTGATTAGTCGAAACAGAGGGGGATccc..............
EX771357       <-- ..................................................
EW731409       <-- GTTCACTGTTGATTAGTCGAAGCAGAGAGGGATAGATTATAGAGAGATGA
FD948709       <-- GTTCACTGTTGATTAGTCGAACCAGAGAGGGATAGATTATAGAGAGATGA
FD972216       <-- GTTCACAGTTGATTAGTCGAAACAGAGAGGGATAGATTATAGAGAGATcc
FD941080       <-- GTTCACTGTTGATTAGTCGAAACAGAGAGGGACAGATTATAGAGAGATcc
EX773550       <-- GTTCACTGTTGATTAGTCGAAACAGAGAGGGATAGATTATAGAGAGATGA
EX747036       <-- GTTCACTGTTGATTAGTCGAAACAGAGAGGGATAGATTATAGAGAGATGA
EV571471       --> ..................................................
FD968146       --> ..................................................
EY919202       --> ..................................................
EX775499       --> ..................................................
EV572887       --> GTTCACTGTTGATTAGTCcc..............................
EV573545       --> ..................................................
EX893665       --> GTTCACTGTTGA......................................
FD547934       --> ..................................................
EX775409       --> ..................................................
EX777350       --> ..................................................
FD944459       --> ..................................................
EX753427       --> ..................................................
EV545049       --> GTTCACTGTTcc......................................
EV529671       --> ..................................................
FD961532       --> ..................................................
EW728671       --> GTTCACTcc.........................................
FD546488       --> ..................................................
FD537557       --> ..................................................

               851    -    901
UN22975        --> AGATAGAAATTTTCTCTTCTATTATTGTTATAGAAGAAGAAGAAGAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973989       <-- ..................................................
EV549611       <-- ..................................................
EY922955       <-- ..................................................
EV524747       <-- ..................................................
EV568925       <-- ..................................................
EV568084       <-- ..................................................
FD552105       <-- ..................................................
EX890073       <-- ..................................................
FD965925       <-- AGATAGAAATTTTCTCTTCTATTcc.........................
FD550546       <-- ..................................................
EW724876       <-- AGATcc............................................
EX771462       <-- AGATAGAAATTTTCTCTTCcc.............................
EX749836       <-- AGATAGAA..........................................
EW724141       <-- ..................................................
FD541229       <-- ..................................................
EX771357       <-- ..................................................
EW731409       <-- AGATAGAAATTTTCTCTTCTATTATTGTTc....................
FD948709       <-- AGATAGAAATTTTCcc..................................
FD972216       <-- ..................................................
FD941080       <-- ..................................................
EX773550       <-- AGATAGAAATTTTCTCTTCTATTATTGTTATAGAAGAAGAAGAAGAAGAA
EX747036       <-- AGATAGAAATTTTCTCTTCcc.............................
EV571471       --> ..................................................
FD968146       --> ..................................................
EY919202       --> ..................................................
EX775499       --> ..................................................
EV572887       --> ..................................................
EV573545       --> ..................................................
EX893665       --> ..................................................
FD547934       --> ..................................................
EX775409       --> ..................................................
EX777350       --> ..................................................
FD944459       --> ..................................................
EX753427       --> ..................................................
EV545049       --> ..................................................
EV529671       --> ..................................................
FD961532       --> ..................................................
EW728671       --> ..................................................
FD546488       --> ..................................................
FD537557       --> ..................................................

               901    -    951
UN22975        --> GAAGAAGAAGAGAGAGAGAGAGTGTGTACAAGCAGACACTAGTGTACTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973989       <-- ..................................................
EV549611       <-- ..................................................
EY922955       <-- ..................................................
EV524747       <-- ..................................................
EV568925       <-- ..................................................
EV568084       <-- ..................................................
FD552105       <-- ..................................................
EX890073       <-- ..................................................
FD965925       <-- ..................................................
FD550546       <-- ..................................................
EW724876       <-- ..................................................
EX771462       <-- ..................................................
EX749836       <-- ..................................................
EW724141       <-- ..................................................
FD541229       <-- ..................................................
EX771357       <-- ..................................................
EW731409       <-- ..................................................
FD948709       <-- ..................................................
FD972216       <-- ..................................................
FD941080       <-- ..................................................
EX773550       <-- GAAGAAGAAGAGAGAGAGAGAGTGTGTACAAGCAGACACTAGTGTACTGT
EX747036       <-- ..................................................
EV571471       --> ..................................................
FD968146       --> ..................................................
EY919202       --> ..................................................
EX775499       --> ..................................................
EV572887       --> ..................................................
EV573545       --> ..................................................
EX893665       --> ..................................................
FD547934       --> ..................................................
EX775409       --> ..................................................
EX777350       --> ..................................................
FD944459       --> ..................................................
EX753427       --> ..................................................
EV545049       --> ..................................................
EV529671       --> ..................................................
FD961532       --> ..................................................
EW728671       --> ..................................................
FD546488       --> ..................................................
FD537557       --> ..................................................

               951    -   1001
UN22975        --> ACTGAGATTGAGAACGACAACTTGTTCCGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973989       <-- ................................
EV549611       <-- ................................
EY922955       <-- ................................
EV524747       <-- ................................
EV568925       <-- ................................
EV568084       <-- ................................
FD552105       <-- ................................
EX890073       <-- ................................
FD965925       <-- ................................
FD550546       <-- ................................
EW724876       <-- ................................
EX771462       <-- ................................
EX749836       <-- ................................
EW724141       <-- ................................
FD541229       <-- ................................
EX771357       <-- ................................
EW731409       <-- ................................
FD948709       <-- ................................
FD972216       <-- ................................
FD941080       <-- ................................
EX773550       <-- ACTGAGATTGAGAACGACAACTTGTTCCGTGA
EX747036       <-- ................................
EV571471       --> ................................
FD968146       --> ................................
EY919202       --> ................................
EX775499       --> ................................
EV572887       --> ................................
EV573545       --> ................................
EX893665       --> ................................
FD547934       --> ................................
EX775409       --> ................................
EX777350       --> ................................
FD944459       --> ................................
EX753427       --> ................................
EV545049       --> ................................
EV529671       --> ................................
FD961532       --> ................................
EW728671       --> ................................
FD546488       --> ................................
FD537557       --> ................................