1      -     51
UN22984        --> GGATACCCGACGCAGCTTCGTTTCCACAACTCTCTGTTAGTTCGATTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW729848       <-- ................TTCGTTTCCACAACTCTCTGTTAGTTCGATTGTT  Raphanus sativus cv Early Scarlet Globe
EX892041       <-- .................ggGTTTCCACAACTCTCTGTTAGTTCGATTGTT  Raphanus sativus var. oleiformis
FD984086       <-- ..........................CAACTCTCTGTTAGTTCGATTGTT  Raphanus raphanistrum subsp. landra
EW727076       <-- .........................ggAACTCTCTGTTAGTTCGATTGTT  Raphanus sativus cv Early Scarlet Globe
EW727374       <-- .........................ggAACTCTCTGTTAGTTCGATTGTT  Raphanus sativus cv Early Scarlet Globe
EX775585       <-- .........................ggAACTCTCTGTTAGTTCGATTGTT  Raphanus raphanistrum subsp. landra
FD538991       <-- .............................................TTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD555368       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD539824       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903724       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766404       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD559707       --> GGATACCCGACGCAGCTTCGTTTCCGCAACTCTCTGTTAGTTCGATTGTT  Raphanus raphanistrum subsp. landra
FD543084       --> .........ggaCAGCTTCGTTTCCGCAACTCTCTGTTAGTTCGATTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW726254       --> ...........ggAGCTTCGTTTCCACAACTCTCTGTTAGTTCGATTGTT  Raphanus sativus cv Early Scarlet Globe
EX888025       --> .................ggGTTTCCACAACTCTCTGTTAGTTCGATTGTT  Raphanus sativus var. oleiformis
EY907900       --> .................ggGTTTCCGCAACTCTCTGTTACTTCGATTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD988151       --> .......................ggACAACTCTCTGTTAGTTCGATTGTT  Raphanus raphanistrum subsp. landra
EX762043       --> .......................gggCAACTCTCTGTTAGTTCGATTGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908700       --> .....................ggccgCAACTCTCTGTTACTTCGATTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW722418       --> .........................ggAACTCTCTGTTAGTTCGATTGTT  Raphanus sativus cv Early Scarlet Globe
EW722419       --> .........................ggAACTCTCTGTTAGTTCGATTGTT  Raphanus sativus cv Early Scarlet Globe
FD544159       --> .........................................gCGATTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX886740       --> .........................................ggGATTGTT  Raphanus sativus var. oleiformis
EW723947       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY924440       --> ..................................................  Raphanus raphanistrum subsp. landra
EY925145       --> ..................................................  Raphanus raphanistrum subsp. landra

               51     -    101
UN22984        --> GATCTACTTCAAATGGCGTCGGAGAAGAAGCTGTCGAACCCC-ATGAGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW729848       <-- GATCTACTTCAAATGGCGTCGGAGAAGAAGCTATCGAACCCC-ATGAGGG  Raphanus sativus cv Early Scarlet Globe
EX892041       <-- GATCTACTTCAAATGGCGTCGGAGAAGAAGCTGTCGAACCCC-ATGAGGG  Raphanus sativus var. oleiformis
FD984086       <-- GATCTACTTCAAATGGCGTCGGAGAAGAAGCCGTCGAACCCC-ATGAGGG  Raphanus raphanistrum subsp. landra
EW727076       <-- GATCTACTTCAAATGGCGTCGGAGAAGAAGCTATCGAACCCCCATGAGGG  Raphanus sativus cv Early Scarlet Globe
EW727374       <-- GATCTACTTCAAATGGCGTCGGAGAAGAAGCTATCGAACCCC-ATGAGGG  Raphanus sativus cv Early Scarlet Globe
EX775585       <-- GATCTACTTCAAATGGCGTCGGAGAAGAAGCTATCGAACCCC-ATGAGGG  Raphanus raphanistrum subsp. landra
FD538991       <-- GATCTCCTTCAAATGGCGTCGGAGAAGAAGCTGTCGAACCCC-ATGAGGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD555368       <-- ..........AAATGGCGTCGGAGAAGGAGCTGTCGAACTCC-ATGAGGG  Raphanus raphanistrum subsp. landra
FD539824       <-- .............................................GAGGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903724       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766404       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD559707       --> GATCTCCTTCAAATGGCGTCGGAGAAGGAGCTGTCGAACTCC-ATGAGGG  Raphanus raphanistrum subsp. landra
FD543084       --> GATCTCCTTCAAATGGCGTCGGAGAAGAAGCTGTCGAACCCC-ATGAGGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW726254       --> GATCTACTTCAAATGGCGTCGGAGAAGAAGCTATCGAACCCC-ATGAGGG  Raphanus sativus cv Early Scarlet Globe
EX888025       --> GATCTACTTCAAATGGCGTCGGAGAAGAAGCTGTCGAACCCC-ATGAGGG  Raphanus sativus var. oleiformis
EY907900       --> GATCTCCTTCAAATGGCGTCGGAGAAGAAGCTGTCGAACCCC-ATGAGGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD988151       --> GATCTACTTCAAATGGCGTCGGAGAAGAAGCCGTCGAACCCC-ATGAGGG  Raphanus raphanistrum subsp. landra
EX762043       --> GATCTACTTCAAATGGCGTCGGAGAAGAAGCTATCGAACCCC-ATGAGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908700       --> GATCTCCTTCAAATGGCGTCGGAGAAGAAGCTGTCGAACCCC-ATGAGGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW722418       --> GATCTACTTCAAATGGCGTCGGAGAAGAAGCTATCGAACCCC-ATGAGGG  Raphanus sativus cv Early Scarlet Globe
EW722419       --> GATCTACTTCAAATGGCGTCGGAGAAGAAGCTATCGAACCCC-ATGAGGG  Raphanus sativus cv Early Scarlet Globe
FD544159       --> GATCTCCTTCAAATGGCGTCGGAGAAGAAGCTGTCGAACCCT-ATGAGGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX886740       --> GATCTACTTCAAATGGCGTCGGAGAAGAAGCTGTCGAACCCC-ATGAGGG  Raphanus sativus var. oleiformis
EW723947       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY924440       --> ..................................................  Raphanus raphanistrum subsp. landra
EY925145       --> ..................................................  Raphanus raphanistrum subsp. landra

               101    -    151
UN22984        --> ACATTAAGGTCCAAAAACTTGTTCTTAACATCTCCGTTGGTGAGAGTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW729848       <-- ACATTAAGGTCCAAAAACTTGTTCTTAACATCTCCGTTGGTGAGAGTGGT
EX892041       <-- ACATTAAGGTCCAAAAACTTGTTCTTAACATCTCCGTTGGTGAGAGTGGT
FD984086       <-- ACATTAAGGTCCAAAAACTTGTTCT---TATCTCCGTTGGTGAGAGTGGT
EW727076       <-- ACATTAAGGTCCAAAAACTTGTTCTTAACATCTCCGTTGGTGAGAGTGGT
EW727374       <-- ACATTAAGGTCCAAAAACTTGTTCTTAACATCTCCGTTGGTGAGAGTGGT
EX775585       <-- ACATTAAGGTCCAAAAACTTGTTCTTAACATCTCCGTTGGTGAGAGTGGT
FD538991       <-- ACATTAAGGTCCAAAAACTTGTTCTCAACATCTCCGTTGGTGAGAGTGGT
FD555368       <-- ACATTAAGGTCCAAAAACTTGTTCTTAACATCTCCGTTGGTGAGAGTGGT
FD539824       <-- ACATTAAGGTCCAAAAACTTGTTCTTAACATCTCCGTTGGTGAGAGTGGT
EY903724       <-- ..................................................
EX766404       <-- ..................................................
FD559707       --> ACATTAAGGTCCAAAAACTTGTTCTTAACATCTCCGTTGGTGAGAGTGGT
FD543084       --> ACATTAAGGTCCAAAAACTTGTTCTCAACATCTCCGTTGGTGAGAGTGGT
EW726254       --> ACATTAAGGTCCAAAAACTTGTTCTTAACATCTCCGTTGGTGAGAGTGGT
EX888025       --> ACATTAAGGTCCAAAAACTTGTTCTTAACATCTCCGTTGGTGAGAGTGGT
EY907900       --> ACATTAAGGTCCAAAAACTTGTTCTTAACATCTCCGTTGGTGAGAGTGGT
FD988151       --> ACATTAAGGTCCAAAAACTTGTTCTTA---TCTCCGTTGGTGAGAGTGGT
EX762043       --> ACATTAAGGTCCAAAAACTTGTTCTTAACACCTCCGTTGGTGAGAGTGGT
EY908700       --> ACATTAAGGTCCAAAAACTTGTTCTTAACATCTCCGTTGGTGAGAGTGGT
EW722418       --> ACATTAAGGTCCAAAAACTTGTTCTTAACATCTCCGTTGGTGAGAGTGGT
EW722419       --> ACATTAAGGTCCAAAAACTTGTTCTTAACATCTCCGTTGGTGAGAGTGGT
FD544159       --> ACATTAAGGTCCAAAAACTTGTTCTTAACATCTCCGTTGGTGAGAGTGGT
EX886740       --> ACATTAAGGTCCAAAAACTTGTTCTTAACATCTCCGTTGGTGAGAGTGGT
EW723947       --> ..................................................
EY924440       --> ..................................................
EY925145       --> ..................................................

               151    -    201
UN22984        --> GATCGTCTCACTCGTGCCTCCAAGGTTTTGGAACAGCTCAGTGGACAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW729848       <-- GATCGTCTCACTCGTGCCTCCAAGGTTTTGGAACAGCTCAGTGGACAAAC
EX892041       <-- GATCGTCTCACTCGTGCCTCCAAGGTTTTGGAACAGCTCAGTGGACAAAC
FD984086       <-- GATCGTCTCACTCGTGCCTCCAAGGTTTTGGAACAGCTCAGTGGACAAAC
EW727076       <-- GGTCGTCTCACTCGTGCCTCCAAGGTTTTGGAACAGCTCAGTGGACAAAC
EW727374       <-- GGTCGTCTCACTCGTGCCTCCAAGGTTTTGGAACAGCTCAGTGGACAAAC
EX775585       <-- GATCGTCTCACTCGTGCCTCCAAGGTTTTGGAACAGCTCAGTGGACAAAC
FD538991       <-- GATCGTCTCACTCGTGCCTCCAAGGTTTTGGAACAGCTCAGTGGACAAAC
FD555368       <-- GATCGTCTCACTCGTGCCTCCAAGGTTTTGGAACAGCTCAGTGGACAAAC
FD539824       <-- GATCGTCTGACTCGTGCCTCCAAGGTTTTGGAACAGCTCAGTGGACAAAC
EY903724       <-- ................................ACAGCTCAGTGGACAAAC
EX766404       <-- ..................................................
FD559707       --> GATCGTCTCACTCGTGCCTCCAAGGTTTTGGAACAGCTCAGTGGACAAAC
FD543084       --> GATCGTCTCACTCGTGCCTCCAAGGTTTTGGAACAGCTCAGTGGACAAAC
EW726254       --> GATCGTCTCACTCGTGCCTCCAAGGTTTTGGAACAGCTCAGTGGACAAAC
EX888025       --> GA................................................
EY907900       --> GATCGTCTCACTCGTGCCTCCAAGGTTTTGGAACAGCTCAGTGGACAAAC
FD988151       --> GATCGTCTCACTCGTGCCTCCAAGGTTTTGGAACAGCTCAGTGGACAAAC
EX762043       --> GATCGTCTCACTCGTGCCTCCAAGGTTTTGGAACAGCTCAGTGGACAAAC
EY908700       --> GATCGTCTCACTCGTGCCTCCAAGGTTTTGGAACAGCTCAGTGGACAAAC
EW722418       --> GGTCGTCTCACTCGTGCCTCCAAGGTTTTGGAACAGCTCAGTGGACAAAC
EW722419       --> GGTCGTCTCACTCGTGCCTCCAAGGTTTTGGAACAGCTCAGTGGACAAAC
FD544159       --> GATCGTCTGACTCGTGCCTCCAAGGTTTTGGAACAGCTCAGTGGACAAAC
EX886740       --> GATCGTCTCACTCGTGCCTCCAAGGTTTTGGAACAGCTCAGTGGACAAAC
EW723947       --> ..gCGTCTCACTCGTGCCTCCAAGGTTTTGGAACAGCTCAGTGGACAAAC
EY924440       --> ......................gGGTTTTGGAACAGCTCAGTGGACAAAC
EY925145       --> ......................gGGTTTTGGAACAGCTCAGTGGACAAAC

               201    -    251
UN22984        --> CCCTGTTTTCTCAAAGGCGAGGTACACTGTGAGGTCTTTTGGTATCAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW729848       <-- CCCTGTTTTCTCAAAGGCAAGGTACACTGTGAGGTCTTTTGGTATCAGGC  Raphanus sativus cv Early Scarlet Globe
EX892041       <-- CCCTGTTTTCTCAAAGGCGAGGTACACTGTGAGGTCTTTTGGTATCAGGC  Raphanus sativus var. oleiformis
FD984086       <-- CCCTGTTTTCTCAAAGGCGAGGTACACTGTGAGGTCTTTTGGTATCAGGC  Raphanus raphanistrum subsp. landra
EW727076       <-- CCCTGTTTTCTCAAAGGCGAGGTACACTGTGAGGTCTTTTGGTATCAGGC  Raphanus sativus cv Early Scarlet Globe
EW727374       <-- CCCTGTTTTCTCAAAGGCGAGGTACACTGTGAGGTCTTTTGGTATCAGGC  Raphanus sativus cv Early Scarlet Globe
EX775585       <-- CCCTGTTTTCTCAAAGGCGAGGTACACTGTGAGGTCTTTTGGTATCAGGC  Raphanus raphanistrum subsp. landra
FD538991       <-- CCCTGTTTTCTCAAAGGCAAGGTACACTGTGAGGTCTTTTGGTATCAGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD555368       <-- CCCTGTTTTCTCAAAGGCAAGGTACACTGTGAGGTCTTTTGGTATCAGGC  Raphanus raphanistrum subsp. landra
FD539824       <-- CCCTGTTTTCCCAAAGGCAAGGTACACTGTGAGGTCTTTTGGTATCAGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903724       <-- CCCTGTTTTCTCAAAGGCAAGGTACACTGTGAGATCTTTTGGTATCAGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766404       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD559707       --> CCCTGTTTTCTCAAAGGCAAGGTACACTGTGAGGTCTTTTGGTATCAGGC  Raphanus raphanistrum subsp. landra
FD543084       --> CCCTGTTTTCTCAAAGGCAAGGTACACTGTGAGGTCTTTTGGTATCAGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW726254       --> CCCTGTTTTCTCAAAGGCAAGGTACACTGTGAGGTCTTTTGGTATCAGGC  Raphanus sativus cv Early Scarlet Globe
EX888025       --> ..................................................  Raphanus sativus var. oleiformis
EY907900       --> CCCTGTTTTCTCAAAGGCAAGGTACACTGTGAGATCTTTTGGTATCAGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD988151       --> CCCTGTTTTCTCAAAGGCGAGGTACACTGTGAGGTCTTTTGGTATCAGGC  Raphanus raphanistrum subsp. landra
EX762043       --> CCCTGTTTTCTCAAAGGCGAGGTACACTGTGAGGTCTTTTGGTATCAGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908700       --> CCCTGTTTTCTCAAAGGCAAGGTACACTGTGAGATCTTTTGGTATCAGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW722418       --> CCCTGTTTTCTCAAAGGCGAGGTACACTGTGAGGTCTTTTGGTATCAGGC  Raphanus sativus cv Early Scarlet Globe
EW722419       --> CCCTGTTTTCTCAAAGGCGAGGTACACTGTGAGGTCTTTTGGTATCAGGC  Raphanus sativus cv Early Scarlet Globe
FD544159       --> CCCTGTTTTCCCAAAGGCAAGGTACACTGTGAGGTCTTTTGGTATCAGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX886740       --> CCCTGTTTTCTCAAAGGCGAGGTACACCGTGAGGTCTTTTGGTATCAGGC  Raphanus sativus var. oleiformis
EW723947       --> CCCTGTTTTCTCAAAGGCGAGGTACACTGTGAGGTCTTTTGGTATCAGGC  Raphanus sativus cv Early Scarlet Globe
EY924440       --> CCCTGTTTTCTCAAAGGCGAGGTACACTGTGAGGTCTTTTGGTATCAGGC  Raphanus raphanistrum subsp. landra
EY925145       --> CCCTGTTTTCTCAAAGGCGAGGTACACTGTGAGGTCTTTTGGTATCAGGC  Raphanus raphanistrum subsp. landra

               251    -    301
UN22984        --> GTAACGAAAAGATTGCGTGCTATGTTACTGTGAGAGGTGACAAGGCAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW729848       <-- GTAACGAAAAGATTGCGTGCTATGTTACTGTGAGAGGTGACAAGGCAATG
EX892041       <-- GTAACGAAAAGATTGCGTGCTATGTTACTGTGAGAGGTGACAAGGCAATG
FD984086       <-- GTAACGAAAAGATCGCGTGCTATGTTACTGTGAGAGGTGACAAGGCAATG
EW727076       <-- GTAACGAAAAGATTGCGTGCTATGTTACTGTGAGAGGTGACAAGGCTATG
EW727374       <-- GTAACGAAAAGATTGCGTGCTATGTTACTGTGAGAGGTGACAAGGCTATG
EX775585       <-- GTAACGAAAAGATTGCGTGCTATGTTACTGTGAGAGGTGACAAGGCAATG
FD538991       <-- GTAACGAAAAGATTGCGTGCTATGTTACTGTGAGAGGTGACAAGGCAATG
FD555368       <-- GTAACGAAAAGATCGCGTGCTATGTTACTGTGAGAGGTGACAAGGCAATG
FD539824       <-- GTAACGAAAAGATTGCGTGCTATGTTACTGTTAGAGGTGACAAGGCAATG
EY903724       <-- GTAACGAAAAGATCGCCTGCTATGTTACTGTGAGAGGTGACAAGGCAATG
EX766404       <-- GTAACGAAAAGATTGCGTGCTATGTTACTGTGAGAGGTGACAAGGCAATG
FD559707       --> GTAACGAAAAGATCGCGTGCTATGTTACTGTGAGAGGTGACAAGGCAATG
FD543084       --> GTAACGAAAAGATTGCGTGCTATGTTACTGTGAGAGGTGACAAGGCAATG
EW726254       --> GTAACGAAAAGATTGCGTGCTATGTTACTGTGAGAGGTGACAAGGCAATG
EX888025       --> ..................................................
EY907900       --> GTAACGAAAAGATCGCCTGCTATGTTACTGTGAGAGGTGACAAGGCAATG
FD988151       --> GTAACGAAAAGATCGCGTGCTATGTTACTGTGAGAGGTGACAAGGCAATG
EX762043       --> GTAACGAAAAGATTGCGTGCTATGTTACTGTGAGAGGTGACAAGGCAATG
EY908700       --> GTAACGAAAAGATCGCCTGCTATGTTACTGTGAGAGGTGACAAGGCAATG
EW722418       --> GTAACGAAAAGATTGCGTGCTATGTTACTGTGAGAGGTGACAAGGCTATG
EW722419       --> GTAACGAAAAGATTGCGTGCTATGTTACTGTGAGAGGTGACAAGGCTATG
FD544159       --> GTAACGAAAAGATTGCGTGCTATGTTACTGTTAGAGGTGACAAGGCAATG
EX886740       --> GTAACGAAAAGATTGCGTGCTATGTTACTGTGAGAGGTGACAAGGCAATG
EW723947       --> GTAACGAAAAGATTGCGTGCTATGTTACTGTGAGAGGTGACAAGGCAATG
EY924440       --> GTAACGAAAAGATCGCGTGCTATGTTACTGTGAGAGGTGACAAGGCAATG
EY925145       --> GTAACGAAAAGATCGCGTGCTATGTTACTGTGAGAGGTGACAAGGCAATG

               301    -    351
UN22984        --> CAGCTTCTTGAGAGTGGTTTGAAAGTTAAGGAGTATGAGCTTCTCAGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW729848       <-- CAGCTTCTTGAGAGTGGTTTGAAAGTTAAGGAGTATGAGCTTCTCAGGAG
EX892041       <-- CAGCTTCTTGAGAGTGGTTTGAAAGTTAAGGAGTATGAGCTTCTCAGGAG
FD984086       <-- CAGCTTCTTGAGAGTGGTTTGAAAGTTAAGGAGTATGAGCTTCTCAGGAG
EW727076       <-- CAGCTTCTTGAGAGTGGTTTGAAAGTTAAGGAGTATGAGCTTCTCAGGAG
EW727374       <-- CAGCTTCTTGAGAGTGGTTTGAAAGTTAAGGAGTATGAGCTTCTCAGGAG
EX775585       <-- CAGCTTCTTGAGAGTGGTTTGAAAGTTAAGGAGTATGAGCTTCTCAGGAG
FD538991       <-- CAGCTTCTTGAGAGTGGTTTGAAAGTTAAGGAGTATGAGCTTCTCAGGAG
FD555368       <-- CAGCTTCTTGAGAGTGGTTTGAAGGTTAAGGAGTATGAGCTTCTCAGGAG
FD539824       <-- CAGCTTCTTGAGAGTGGTTTGAAAGTTAAGGAGTATGAGCTTCTCAGGAG
EY903724       <-- CAGCTTCTTGAGAGTGGTTTGAAAGTTAAGGAGTATGAGCTTCTCAGGAG
EX766404       <-- CAGCTTCTTGAGAGTGGTTTGAAAGTTAAGGAGTATGAGCTTCTCAGGAG
FD559707       --> CAGCTTCTTGAGAGTGGTTTGAAGGTTAAGGAGTATGAGCTTCTCAGGAG
FD543084       --> CAGCTTCTTGAGAGTGGTTTGAAAGTTAAGGAGTATGAGCTTCTCAGGAG
EW726254       --> CAGCTTCTTGAGAGTGGTTTGAAAGTTAAGGAGTATGAGCTTCTCAGGAG
EX888025       --> ..................................................
EY907900       --> CAGCTTCTTGAGAGTGGTTTGAAAGTTAAGGAGTATGAGCTTCTCAGGAG
FD988151       --> CAGCTTCTTGAGAGTGGTTTGAAAGTTAAGGAGTATGAGCTTCTCAGGAG
EX762043       --> CAGCTTCTTGAGAGTGGTTTGAAAGTTAAGGAGTATGAGCTTCTCAGGAG
EY908700       --> CAACTTCTTGAGAGTGGTTTGAAAGTTAAGGAGTATGAGCTTCTCAGGAG
EW722418       --> CAGCTTCTTGAGAGTGGTTTGAAAGTTAAGGAGTATGAGCTTCTCAGGAG
EW722419       --> CAGCTTCTTGAGAGTGGTTTGAAAGTTAAGGAGTATGAGCTTCTCAGGAG
FD544159       --> CAGCTTCTTGAGAGTGGTTTGAAAGTTAAGGAGTATGAGCTTCTCAGGAG
EX886740       --> CAGCTTCTTGAGAGTGGTTTGAAAGTTAAGGAGTATGAGCTTCTCAGGAG
EW723947       --> CAGCTTCTTGAGAGTGGTTTGAAAGTTAAGGAGTATGAGCTTCTCAGGAG
EY924440       --> CAGCTTCTTGAGAGTGGTTTGAAAGTTAAGGAGTATGAGCTTC--AGGAG
EY925145       --> CAGCTTCTTGAGAGTGGTTTGAAAGTTAAGGAGTATGAGCTTC--AGGAG

               351    -    401
UN22984        --> GAACTTTAGTGACACTGGTTGCTTTGGATTCGGTATCCAAGAGCACATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW729848       <-- GAACTTCAGTGACACTGGTTGCTTTGGATTCGGTATCCAAGAGCACATTG
EX892041       <-- GAACTTTAGTGACACTGGTTGCTTTGGATTCGGTATCCAAGAGCACATTG
FD984086       <-- GAACTTTAGTGACACTGGTTGCTTTGGATTCGGTATCCAAGAGCACATTG
EW727076       <-- GAACTTTAGTGACACTGGTTGCTTTGGATTCGGTATCCAAGAGCACATTG
EW727374       <-- GAACTTTAGTGACACTGGTTGCTTTGGATTCGGTATCCAAGAGCACATTG
EX775585       <-- GAACTTTAGTGACACTGGTTGCTTTGGATTCGGTATCCAAGAGCACATTG
FD538991       <-- GAATTTTAGTGACACTGGTTGCTTTGGATTCGGTATCCAAGAGCACATTG
FD555368       <-- GAACTTTAGTGACACTGGTTGCTTTGGATTCGGTATCCAAGAGCACATTG
FD539824       <-- GAACTTTAGTGACACTGGTTGCTTTGGATTCGGTATCCAAGAGCACATTG
EY903724       <-- GAACTTCAGTGACACTGGTTGCTTTGGATTCGGTATCCAAGAGCACATTG
EX766404       <-- GAACTTTAGTGACACTGGTTGCTTTGGATTCGGTATCCAAGAGCACATTG
FD559707       --> GAACTTTAGTGACACTGGTTGCTTTGGATTCGGTATCCAAGAGCACATTG
FD543084       --> GAATTTTAGTGACACTGGTTGCTTTGGATTCGGTATCCAAGAGCACATTG
EW726254       --> GAACTTCAGTGACACTGGTTGCTTTGGATTCGGTATCCAAGAGCACATTG
EX888025       --> ..................................................
EY907900       --> GAACTTCAGTGACACTGGTTGCTTTGGATTCGGTATCCAAGAGCACATTG
FD988151       --> GAACTTTAGTGACACTGGTTGCTTTGGATTCGGTATCCAAGAGCACATTG
EX762043       --> GAACTTTAGTGACACTGGTTGCTTTGGATTCGGTATCCAAGAGCACATTG
EY908700       --> GAACTTCAGTGACACTGGTTGCTTTGGATTCGGTATCCAAGAGCACATTG
EW722418       --> GAACTTTAGTGACACTGGTTGCTTTGGATTCGGTATCCAAGAGCACATTG
EW722419       --> GAACTTTAGTGACACTGGTTGCTTTGGATTCGGTATCCAAGAGCACATTG
FD544159       --> GAACTTTAGTGACACTGGTTGCTTTGGATTCGGTATCCAAGAGCACATTG
EX886740       --> GAACTTTAGTGACACTGGTTGCTTTGGATTCGGTATCCAAGAGCACATTG
EW723947       --> GAACTTTAGTGACACTGGTTGCTTTGGATTCGGTATCCAAGAGCACATTG
EY924440       --> GAACTTTAGTGACACTGGTTGCTTTGGATTCGGTATCCAAGAGCACATTG
EY925145       --> GAACTTTAGTGACACTGGTTGCTTTGGATTCGGTATCCAAGAGCACATTG

               401    -    451
UN22984        --> ATCTTGGTATCAAGTATGATCCTTCTACGGGTATCTACGGAATGGACTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW729848       <-- ATCTTGGTATCAAGTATGATCCTTCTACGGGTATCTACGGAATGGACTTC
EX892041       <-- ATCTTGGTATCAAGTATGATCCTTTTACGGGTATTTACGGAATGGACTTC
FD984086       <-- ATCTTGGTATCAAGTATGATCCTTCTACGGGTATCTACGGAATGGACTTC
EW727076       <-- ATCTTGGTATCAAGTATGATCCTTCTACGGGTATCTACGGAATGGACTTC
EW727374       <-- ATCTTGGTATCAAGTATGATCCTTCTACGGGTATTTACGGAATGGACTTC
EX775585       <-- ATCTTGGTATCAAGTATGATCCTTTTACGGGTATTTACGGAATGGACTTC
FD538991       <-- ATCTTGGTATCAAGTATGATCCCTCTACGGGTATCTACGGAATGGACTCC
FD555368       <-- ATCTTGGTATCAAGTATGATCCTTTTACGGGTATTTACGGAATGGACTTC
FD539824       <-- ATCTTGGTATCAAGTATGATCCTTCTACGGGTATCTACGGAATGGACTTC
EY903724       <-- ATCTTGGCATCAAGTATGATCCTTCTACGGGTATCTACGGAATGGACTTC
EX766404       <-- ATCTTGGTATCAAGTATGATCCTTCTACGGGTATCTACGGAATGGACTTC
FD559707       --> ATCTTGGTATCAAGTATGATCCTTCTACGGGTATCTACGGAATGGACTTC
FD543084       --> ATCTTGGTATCAAGTATGATCCCTCTACGGGTATCTACGGAATGGACTCC
EW726254       --> ATCTTGGTATCAAGTATGATCCTTCTACGGGTATCTACGGAATGGACTTC
EX888025       --> ..................................................
EY907900       --> ATCTTGGCATCAAGTATGATCCTTCTACGGGTATCTACGGAATGGACTTC
FD988151       --> ATCTTGGTATCAAGTATGATCCTTCTACGGGTATCTACGGAATGGACTTC
EX762043       --> ATCTTGGTATCAAGTATGATCCTTCTACGGGTATCTACGGAATGGACTTC
EY908700       --> ATCTTGGTATCAAGTATGATCCTTCTACGGGTATCTACGGAATGGACTTC
EW722418       --> ATCTTGGTATCAAGTATGATCCTTCTACGGGTATCTACGGAATGGACTTC
EW722419       --> ATCTTGGTATCAAGTATGATCCTTCTACGGGTATCTACGGAATGGACTTC
FD544159       --> ATCTTGGTATCAAGTATGATCCTTCTACGGGTATCTACGGAATGGACTTC
EX886740       --> ATCTTGGTATCAAGTATGATCCTTCTACGGGTATCTACGGAATGGACTTC
EW723947       --> ATCTTGGTATCAAGTATGATCCTTCTACGGGTATCTACGGAATGGACTTC
EY924440       --> ATCTTGGTATCAAGTATGATCCTTCTACGGGTATCTACGGAATGGACTTC
EY925145       --> ATCTTGGTATCAAGTATGATCCTTCTACGGGTATCTACGGAATGGACTTC

               451    -    501
UN22984        --> TATGTAGTTCTTGAACGTCCAGGATACCGTGTGGCTCGTCGCCGTAGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW729848       <-- TATGTAGTTCTTGAACGTCCAGGATACCGTGTGGCTCGTCGACGCAGGTG  Raphanus sativus cv Early Scarlet Globe
EX892041       <-- TATGTAGTTCTTGAACGTCCAGGATACCGTGTGGCTCGTCGCCGTAGGTG  Raphanus sativus var. oleiformis
FD984086       <-- TATGTAGTTCTTGAACGTCCAGGATACCGTGTGGCTCGTCGCCGTAGGTG  Raphanus raphanistrum subsp. landra
EW727076       <-- TATGTAGTTCTTGAACGTCCAGGATACCGTGTGGCTCGTCGCCGTAGGTG  Raphanus sativus cv Early Scarlet Globe
EW727374       <-- TATGTAGTTCTTGAACGTCCAGGATACCGTGTGGCTCGTCGCCGTAGGTG  Raphanus sativus cv Early Scarlet Globe
EX775585       <-- TATGTAGTTCTTGAACGTCCAGGATACCGTGTGGCTCGTCGCCGTAGGTG  Raphanus raphanistrum subsp. landra
FD538991       <-- TATGTAGTTCTTGAACGTCCAGGATACCGTGTGGCTCGTCGCCGCAGGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD555368       <-- TATGTAGTTCTTGAACGTCCAGGATACCGTGTGGCTCGTCGCCGCAGGTG  Raphanus raphanistrum subsp. landra
FD539824       <-- TATGTAGTTCTTGAACGTCCAGGATACCGTGTGGCTCGTCGACGCAGGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903724       <-- TATGTAGTTCTTGAACGTCCAGGATACCGTGTGGCTCGTCGACGCAGGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766404       <-- TATGTAGTTCTTGAACGTCCAGGATACCGTGTGGCTCGTCGCCGTAGGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD559707       --> TATGTAGTTCTTGAACGTCCAGGATACCGTGTGGCTCGTCGCCGCAGGTG  Raphanus raphanistrum subsp. landra
FD543084       --> TATGTAGTTCTTGAACGTCCAGGATACCGTGTGGCTCGTCGCCGCAGGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW726254       --> TATGTAGTTCTTGAACGTCCAGGATACCGTGTGGCTCGTCGACGCAGGTG  Raphanus sativus cv Early Scarlet Globe
EX888025       --> ..................................................  Raphanus sativus var. oleiformis
EY907900       --> TATGTAGTTCTTGAACGTCCAGGATACCGTGTGGCTCGTCGACGCAGGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD988151       --> TATGTAGTTCTTGAACGTCCAGGATACCGTGTGGCTCGTCGCCGTAGGTG  Raphanus raphanistrum subsp. landra
EX762043       --> TATGTAGTTCTTGAACGTCCAGGATACCGTGTGGCTCGTCGCCGTAGGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908700       --> TATGTAGTTCTTGAACGTCCAGGATACCGTGTGGCTCGTCGACGCAGGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW722418       --> TATGTAGTTCTTGAACGTCCAGGATACCGTGTGGCTCGTCGCCGTAGGTG  Raphanus sativus cv Early Scarlet Globe
EW722419       --> TATGTAGTTCTTGAACGTCCAGGATACCGTGTGGCTCGTCGCCGTAGGTG  Raphanus sativus cv Early Scarlet Globe
FD544159       --> TATGTAGTTCTTGAACGTCCAGGATACCGTGTGGCTCGTCGACGCAGGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX886740       --> TATGTAGTTCTTGAACGTCCAGGATACCGTGTGGCTCGTCGCCGTAGGTG  Raphanus sativus var. oleiformis
EW723947       --> TATGTAGTTCTTGAACGTCCAGGATACCGTGTGGCTCGT-GCCGTAGGTG  Raphanus sativus cv Early Scarlet Globe
EY924440       --> TATGTAGTTCTTGAACGTCCAGGATACCGTGTGGCTCGTCGCCGTAGGTG  Raphanus raphanistrum subsp. landra
EY925145       --> TATGTAGTTCTTGAACGTCCAGGATACCGTGTGGCTCGTCGCCGTAGGTG  Raphanus raphanistrum subsp. landra

               501    -    551
UN22984        --> CAAGGCTCGTGTTGGTATCCAACACAGAGTGACTAAGGATGATGCAATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW729848       <-- CAAGGCTCGTGTTGGCATCCAACACAGAGTGACTAAGGATGATGCAATGA  Raphanus sativus cv Early Scarlet Globe
EX892041       <-- CAAGGCTCGTGTTGGTATCCAACACAGAGTGACCAAGGATGATGCAATGA  Raphanus sativus var. oleiformis
FD984086       <-- CAAGGCTCGTGTTGGTATCCAACACAGAGTGACTAAGGATGATGCAGTGA  Raphanus raphanistrum subsp. landra
EW727076       <-- CAAGGCTCGTGTTGGTATCCAACACAGAGTGACCAAGGATGATGCAATGA  Raphanus sativus cv Early Scarlet Globe
EW727374       <-- CAAGGCTCGTGTTGGTATCCAACACAGAGTGACCAAGGATGATGCAATGA  Raphanus sativus cv Early Scarlet Globe
EX775585       <-- CAAGGCTCGTGTTGGTATCCAACACAGAGTGACCAAGGATGATGCAATGA  Raphanus raphanistrum subsp. landra
FD538991       <-- CAAGGCTCGTGTTGGTATCCAACACAGAGTGACTAAGGATGATGCAATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD555368       <-- CAAGGCTCGTGTTGGTATCCAACACAGAGTGACTAAGGATGATGCAATGA  Raphanus raphanistrum subsp. landra
FD539824       <-- CAAGGCTCGTGTTGGTATCCAACACAGAGTGACTAAGGATGATGCAATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903724       <-- CAAGGCTCGTGTTGGTATCCAACACAGGGTGACTAAGGATGATGCAATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766404       <-- CAAGGCTCGTGTTGGTATCCAACACAGAGTGACCAAGGATGATGCAATGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD559707       --> CAAGGCTCGTGTTGGTATCCAACACAGAGTGACTAAGGATGATGCAATGA  Raphanus raphanistrum subsp. landra
FD543084       --> CAAGGCTCGTGTTGGTATCCAACACAGAGTGACTAAGGATGATGCAATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW726254       --> CAAGGCTCGTGTTGGCATCCAACACAGAGTGACTAAGGATGATGCAATGA  Raphanus sativus cv Early Scarlet Globe
EX888025       --> ..................................................  Raphanus sativus var. oleiformis
EY907900       --> CAAGGCTCGTGTTGGTATCCAACACAGGGTGACTAAGGATGATGCAATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD988151       --> CAAGGCTCGTGTTGGTATCCAACACAGAGTGACTAAGGATGATGCAGTGA  Raphanus raphanistrum subsp. landra
EX762043       --> CAAGGCTCGTGTTGGTATCCAACACAGAGTGACCAAGGATGATGCAATGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908700       --> CAAGGCTCGTGTTGGTATCCAACACAGAGTGACTAAGGATGATGCAATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW722418       --> CAAGGCTCGTGTTGGTATCCAACACAGAGTGACCAAGGATGATGCAATGA  Raphanus sativus cv Early Scarlet Globe
EW722419       --> CAAGGCTCGTGTTGGTATCCAACACAGAGTGACCAAGGATGATGCAATGA  Raphanus sativus cv Early Scarlet Globe
FD544159       --> CAAGGCTCGTGTTGGTATCCAACACAGAGTGACTAAGGATGATGCAATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX886740       --> CAAGGCTCGTGTTGGTATCCAACACAGAGTGACCAAGGATGATGCAATGA  Raphanus sativus var. oleiformis
EW723947       --> CAAGGCTCGTGTTGGTATCCAACACAGAGTGACCAAGGATGATGCAATGA  Raphanus sativus cv Early Scarlet Globe
EY924440       --> CAAGGCTCGTGTTGGTATCCAACACAGAGTGACTAAGGATGATGCAATGA  Raphanus raphanistrum subsp. landra
EY925145       --> CAAGGCTCGTGTTGGTATCCAACACAGAGTGACTAAGGATGATGCAATGA  Raphanus raphanistrum subsp. landra

               551    -    601
UN22984        --> AATGGTTCCAAGTTAAGTATGAAGGAGTTATCCTCAACAAGTCTCAGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW729848       <-- AATGGTTCCAAGTTAAGTATGAAGGAGTTATCCTCAACAAGTCTCAGAAC
EX892041       <-- AATGGTTCCAAGTTAAGTATGAAGGAGTTATCCTCAACAAGTCTCAGAAC
FD984086       <-- AATGGTTCCAAGTTAAGTATGAAGGAGTTATCCCCAACAAGTCTCAGAAC
EW727076       <-- AATGGTTCCAAGTTAAGTATGAAGGAGTTATCCTCAACAAGTCTCAGAAC
EW727374       <-- AATGGTTCCAAGTTAAGTATGAAGGAGTTATCCTCAACAAGTCTCAGAAC
EX775585       <-- AATGGTTCCAAGTTAAGTATGGAGGAGTTATCCTCAACAAGTCTCAGAAC
FD538991       <-- AATGGTTCCAAGTTAAGTATGAAGGAGTTATCCTCAACAAGTCTCAGAAC
FD555368       <-- AATGGTTCCAAGTTAAGTATGAAGGAGTTATCCTCAACAAGTCTCAGAAC
FD539824       <-- AATGGTTCCAAGTTAAGTATGAAGGAGTTATCCTCAACAAGTCTCAGAAC
EY903724       <-- AATGGTTCCAAGTTAAGTATGAAGGAGTTATTCTCAACAAGTCTCAGAAC
EX766404       <-- AATGGTTCCAAGTTAAGTATGAAGGAGTTATCCTCAACAAGTCTCAGAAC
FD559707       --> AATGGTTCCAAGTTAAGTATGAAGGAGTTATCCTCAACAAGTCTCAGAAC
FD543084       --> AATGGTTCCAAGTTAAGTATGAAGGAGTTATCCTCAACAAGTCTCAGAAC
EW726254       --> AATGGTTCCAAGTTAAGTATGAAGGAGTTATCCTCAACAAGTCTCAGAAC
EX888025       --> ..................................................
EY907900       --> AATGGTTCCAAGTTAAGTATGAAGGAGTTATTCTCAACAAGTCTCAGAAC
FD988151       --> AATGGTTCCAAGTTAAGTATGAAGGAGTTATCCCCAACAAGTCTCAGAAC
EX762043       --> AATGGTTCCAAGTTAAGTATGAAGGAGTTATCCTCAACAAGTCTCAGAAC
EY908700       --> AATGGTTCCAAGTTAAGTATGAAGGAGTTATTCTCAACAAGTCTCAGAAC
EW722418       --> AATGGTTCCAAGTTAAGTATGAAGGAGTTATCCTCAACAAGTCTCAGAAC
EW722419       --> AATGGTTCCAAGTTAAGTATGAAGGAGTTATCCTCAACAAGTCTCAGAAC
FD544159       --> AATGGTTCCAAGTTAAGTATGAAGGAGTTATCCTCAACAAGTCTCAGAAC
EX886740       --> AATGGTTCCAAGTTAAGTATGAAGGAGTTATCCTCAACAAGTCTCAGA--
EW723947       --> AATGGTTCCAAGTTAAGTATGGAGGAGTTATCCTCAACAAGTCTCAGAAC
EY924440       --> AATGGTTCCAAGTTAAGTATGAAGGAGTTATCCTCAACAAGTCTCAGAAC
EY925145       --> AATGGTTCCAAGTTAAGTATGAAGGAGTTATCCTCAACAAGTCTCAGAAC

               601    -    651
UN22984        --> ATCACTGGCTAAACTAAAACTTGAATCTTCATAGATTTTTTGTTGATTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW729848       <-- ATCACTGGCTAAACTAAAACTTGAATCTTCATAGATTTTTTGTTGATTCT
EX892041       <-- ATCACTGGCTAAACTAAAACTTGAATCTTCATAGATTTTTTGTTGATTCT
FD984086       <-- ATCACTGGCTAAACTAAAACTTGAATCTTCATAGATTTTTTGTTGATTCT
EW727076       <-- ATCACTGGCTAAACTAAAACTTGAATCTTCATAGATTTTTTGTTGATTCT
EW727374       <-- ATCACTGGCTAAACTAAAACTTGAATCTTCATAGATTTTTTGTTGATTCT
EX775585       <-- ATCACTGGCTAAACTAAAACTTGAATCTTCATAGATTTTTTGTTGATTCT
FD538991       <-- ATCACTGGCTAAACTAAAACTTGAATCTTCATAGATTTTTTGTTGATTCT
FD555368       <-- ATCACTGGCTAAACTAAAACTTGAATCTTCATAGATTTTTTGTTGATTCT
FD539824       <-- ATCACTGGCTAAACTAAAACTTGAATCTTCATAGATTTTTTGTTGATTCT
EY903724       <-- ATCACTGGCTAAACTAAAACTTGAGTCTTCATAGATTTTTTGTTGATTCT
EX766404       <-- GTCACTGGCTAAACTAAAACTTGAATCTTCATAGATTTTT-GTTGATTCT
FD559707       --> ATCACTGGCTAAACTAAAACTTGAATCTTCATAGATTTTTTGTTGATTCT
FD543084       --> ATCACTGGCTAAACTAAAACTTGAATCTTCATAGATTTTTTGTTGATTCT
EW726254       --> ATCACTGGCTAAACTAAAACTTGAATCTTCATAGATTTTTTGTTGATTCT
EX888025       --> ..................................................
EY907900       --> ATCACTGGCTAAACTAAAACTTGAGTCTTCATAGATTTTTTGTTGATTCT
FD988151       --> ATCACTGGCTAAACTAAAACTTGAATCTTCATAGATTTTTTGTTGATTCT
EX762043       --> GTCACTGGCTAAACTAAAACTTGAATCTTCATAGATTTTT-GTTGATTCT
EY908700       --> ATCACTGGCTAAACTAAAACTTGAGTCTTCATAGATTTTTTGTTGATTCT
EW722418       --> ATCACTGGCTAAACTAAAACTTGAATCTTCATAGATTTTTTGTTGATTCT
EW722419       --> ATCACTGGCTAAACTAAAACTTGAATCTTCATAGATTTTTTGTTGATTCT
FD544159       --> ATCACTGGCTAAACTAAAACTTGAATCTTCATAGATTTTTTGTTGATTCT
EX886740       --> -TCACTGGCTAAACTAAAACTCGAATCTTCATAGATTTTTTGTTGATTCT
EW723947       --> ATCACTGGCTAAACTAAAACTTGAATCTTCATAGATTTTTTGTTGATTCT
EY924440       --> ATCACTGGCTAAACTAAAACTTGAATCTTCATAGATTTTTTGTTGATTCT
EY925145       --> ATCACTGGCTAAACTAAAACTTGAATCTTCATAGATTTTTTGTTGATTCT

               651    -    701
UN22984        --> AGCTTTTGTTT-TTTTT-AAGTTGTCATCTTTACGATTTCTGGATGTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW729848       <-- AGCTTTTGGTT-TTTTT-AAGTTGTCATCTTTACGATTTCTGGATATTTA
EX892041       <-- AGCTTTTGTTT-TTTTTTAAGTTGTCATCTTTACGATTTCTGGATGTTTA
FD984086       <-- AGCTTTTGTTT-TTTTTTAAGTTGTCATCTTTACGATTTCTGGATGTTTA
EW727076       <-- AGCTTTTGTTT-TTTTT-TAGTTGTCATCTTTACGATTTCTGGATGTTTA
EW727374       <-- AGCTTTTGTTT-TTTTT-TAGTTGTCATCTTTACGATTTCTGGATGTTTA
EX775585       <-- AGCTTTTGTTTGTTTTT-AAGTTGTCATCTTTACGATTTCTGGATGTTTA
FD538991       <-- AGCTTTTGTTT-TTTT--AAGTTGTCATCTTTACGATTTCTGGATATTTA
FD555368       <-- AGCTTTTGTTT-TTTTTTAAGTTGTCATCTTTACGATTTCTGGATGTTTA
FD539824       <-- AGCTTTTGTTT-TTTTT-AAGTTGTCATCTTTACGATATCTGGATGTTTA
EY903724       <-- AGTTTTTGTTT-TT--T-AAGTTGTCATCTTTACGATTTCTGGATATTTA
EX766404       <-- AGCTTTTGTTTGTTTTT-AAGTTGTCATCTTTACGATTTCTGGATGTTTA
FD559707       --> AGCTTTTGTTT-T.....................................
FD543084       --> AGCTTTTGTTT-TTTT--AAGTTGTCATCTTTACGATTTCTGGATATTTA
EW726254       --> AGCTTTTGGTT-TTTT--AAGTTGTCATCTTTACGATTTCTGGATattaa
EX888025       --> ..................................................
EY907900       --> AGTTTTTGTTT-TTT---AAGTTGTCATCTTTACGATTTCTGGATATTTA
FD988151       --> AGCTTTTGTTT-TTTTT-AAGTTGTCATCTTTACGATTTCTGGATGTTTA
EX762043       --> AGCTTTTGTTTGTTTTT-AAGTTGTCATCTTTACGATTTCTGGATGTTTA
EY908700       --> AGTTTTTGTTT-TTT---AAGTTGTCATCTTTACGATTTCTGGATATTTA
EW722418       --> AGCTTTTGTTT-TTTTT-TAGTTGTCATCTTTACGATTTCTGGATGTTTA
EW722419       --> AGCTTTTGTTT-TTTTT-TAGTTGTCATCTTTACGATTTCTGGATGTTTA
FD544159       --> AGCTTTTGTTT-TTTTT-AAGTTGTCATCTTTACGATATCTGGATGTTTA
EX886740       --> AGCTTTTGTTT-TTT---AAGTTGTCATCTTTACGATTTCTGGATGTTTA
EW723947       --> AGCTTTTGTTT-TTTTT-A-GTTGTCATCTTTACGATTTCTGGATGTTTA
EY924440       --> AGCTTTTGTTT-TTTTTTAAGTTGTCATCTTTACGATTTCTGGATGTTTA
EY925145       --> AGCTTTTGTTT-TTTTTTAAGTTGTCATCTTTACGATTTCTGGATGTTTA

               701    -    751
UN22984        --> AGAATCGCTTGTTCTAGTAAAACCTCTTTTTGACGTCAGTGGGGTAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW729848       <-- AGAATCGCTTGTTCTAGTAAAACCTCTTTTTGACGTCAGTGGGGTAGAAA  Raphanus sativus cv Early Scarlet Globe
EX892041       <-- AGAATCGCTTGTTCTAGTAAAACCTCTTTTTG..................  Raphanus sativus var. oleiformis
FD984086       <-- AGAATCGCTTGTTCTAGTAAAACCTCTTTTTGTAGTCAGTGGGGTAGAAA  Raphanus raphanistrum subsp. landra
EW727076       <-- AGAATCGCTTGTTCTAGTAAAACCTCTTTTTGA.................  Raphanus sativus cv Early Scarlet Globe
EW727374       <-- AGAATCGCTTGTTCTAGTAAAACCTCTTTTTGAAGTCAGTGGGGTAGAAA  Raphanus sativus cv Early Scarlet Globe
EX775585       <-- AGAATCGCTTGTTCTAGc................................  Raphanus raphanistrum subsp. landra
FD538991       <-- AGAATCGCTTGTTCTAGTAAAACCTCTTTTTGACGTCAGTGGGTTAGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD555368       <-- AGAATCGCTTGTTCTAGTAAAACCTCTTTTTGTAGTCAGTGGGGTAGAAA  Raphanus raphanistrum subsp. landra
FD539824       <-- AGAATCGCTTGTTCTAGTAAAACCTCTTTTTGACGTCAGTGGGGTAGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903724       <-- AGAATCGCTTGTTCTAGTAAAACCTCTTTTTGACGTCAGTGTGGTAGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766404       <-- AGAATCGCTTGTTCTAGTAAAACCTCTTTTTGTAGTCAGTGGGGTAGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD559707       --> ..................................................  Raphanus raphanistrum subsp. landra
FD543084       --> AGAATCGCTTGTTCTAGTAAAcct..........................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW726254       --> ga................................................  Raphanus sativus cv Early Scarlet Globe
EX888025       --> ..................................................  Raphanus sativus var. oleiformis
EY907900       --> AGAATCGCTTGTTCTAGTAAA-CCTCTTTT-GACGTCAGTGTGGTAGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD988151       --> AGAATCGCTTGTTCTAGTAAAACCTCTTTT-GTAGTCAGTGGGGTAGAAA  Raphanus raphanistrum subsp. landra
EX762043       --> AGAATCGCTTGTTCTAGTAAA-CCTCTTTT-GTAGTCAGTGGGGTAGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908700       --> AGAATCGCTTGTTCTAGTAAA-CCTCTTTTTGACGTCAGTGTGGTAGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW722418       --> AGAATCGCTTGTTCTAGTAAAACCTCTTTTTGAAGTCAGTGGGGTAGAAA  Raphanus sativus cv Early Scarlet Globe
EW722419       --> AGAATCGCTTGTTCTAGTAAAACCTCTTTTTGAAGTCAGTGGGGTAGAAA  Raphanus sativus cv Early Scarlet Globe
FD544159       --> AGAATCGCTTGTTCTAGTAAAACCTCTTTTTGACGTCAGTGGGGTAGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX886740       --> AGAATCGCTTGTTCT...................................  Raphanus sativus var. oleiformis
EW723947       --> AGAATCGCTTGTTCTAGTAAAACCTCTTTTTtgaagtcg...........  Raphanus sativus cv Early Scarlet Globe
EY924440       --> AGAATCGCTTGTTCTAGTAAAACCTCTTTTTGTAGTCAGTGGGGTAGAAA  Raphanus raphanistrum subsp. landra
EY925145       --> AGAATCGCTTGTTCTAGTAAAACCTCTTTTTGTAGTCAGTGGGGTAGAAA  Raphanus raphanistrum subsp. landra

               751    -    801
UN22984        --> TTATATTTCCAGAACCTTCTTTTATGTTTACCATCTATGTCATTTAAATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW729848       <-- TTA-ATTTCCAGAACCTTCTTc............................  Raphanus sativus cv Early Scarlet Globe
EX892041       <-- ..................................................  Raphanus sativus var. oleiformis
FD984086       <-- TTATATTTCCAGAACCTTCTTTTATGTTTACCATCTATGTCATTTAAATT  Raphanus raphanistrum subsp. landra
EW727076       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW727374       <-- TTATATTTCCAGAACCTTCTTTTATGTTTACCATCTATGTCATTTAAATT  Raphanus sativus cv Early Scarlet Globe
EX775585       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD538991       <-- TTAAATTgcc........................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD555368       <-- TTATATTTCCAGAACCTTCTTTTATGTTTACCATCTATGTCATTTAAATT  Raphanus raphanistrum subsp. landra
FD539824       <-- TTAAATTTCCAGACCCTTCTTTTATGTTTACCATCTAT............  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903724       <-- TTAAATTTCC........................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766404       <-- TTATATTTCCAGAA....................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD559707       --> ..................................................  Raphanus raphanistrum subsp. landra
FD543084       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW726254       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX888025       --> ..................................................  Raphanus sativus var. oleiformis
EY907900       --> TTAAATTTCCAaaaaaaaa...............................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD988151       --> TTATATTTCCAGA-CCTTCTTT-ATGTT-A-CATCTATGTCATT......  Raphanus raphanistrum subsp. landra
EX762043       --> TTATATTT..........................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908700       --> TTAAATTTCC........................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW722418       --> TTATATTTCCAGAACCTTCTTTTATGTTTACCATCTATGTCATTTAAATT  Raphanus sativus cv Early Scarlet Globe
EW722419       --> TTATATTTCCAGAACCTTCTTTTATGTTTACCATCTATGTCATTTAAATT  Raphanus sativus cv Early Scarlet Globe
FD544159       --> TTAAATTTCCAGACCCTTCTTTTATGTTTACCATCTATGCCATTTAAATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX886740       --> ..................................................  Raphanus sativus var. oleiformis
EW723947       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY924440       --> TTATATTTCCAGAACCTTCTTTTATGTTTACCATCTATGTCATTTAAATT  Raphanus raphanistrum subsp. landra
EY925145       --> TTATATTTCCAGAACCTTCTTTTATGTTTACCATCTATGTCATTTAAAT.  Raphanus raphanistrum subsp. landra

               801    -    851
UN22984        --> TCCAAGAACCTTCTTAATCG
                   ~~~~~~~~~~~~~~~~~~~~
EW729848       <-- ....................
EX892041       <-- ....................
FD984086       <-- TCCAAGAACC..........
EW727076       <-- ....................
EW727374       <-- TCC.................
EX775585       <-- ....................
FD538991       <-- ....................
FD555368       <-- TCCAAGAACCTTCTTAATCG
FD539824       <-- ....................
EY903724       <-- ....................
EX766404       <-- ....................
FD559707       --> ....................
FD543084       --> ....................
EW726254       --> ....................
EX888025       --> ....................
EY907900       --> ....................
FD988151       --> ....................
EX762043       --> ....................
EY908700       --> ....................
EW722418       --> TCC.................
EW722419       --> TCC.................
FD544159       --> TCCAAG..............
EX886740       --> ....................
EW723947       --> ....................
EY924440       --> T...................
EY925145       --> ....................