Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN22988

               1      -     51
UN22988        --> ATTTCATTTTCTCTGAGAAACAAACCAAAAGGAGAAAAAAATGAGAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720907       <-- ..................................................
FY432311       <-- ..................................................
EY934223       <-- ..................................................
EV574085       <-- ..................................................
FD568001       <-- ..................................................
FD567919       <-- ..................................................
FD583398       <-- ..................................................
FY431768       --> ATTTCATTTTCTCTGAGAAACAAACCAAAAGGAGAAAAAAATGAGAGAGA
FD579411       --> ..................................................
FY443985       --> ..................................................
FD533385       --> ..................................................
EW717982       --> ..................................................
EY937996       --> ..................................................
EV569572       --> ..................................................
FD564431       --> ..................................................
FD564541       --> ..................................................
EV548557       --> ..................................................

               51     -    101
UN22988        --> TCCTCCACATCCAAGGCGGCCAATGTGGAAACCAGATCGGCGCCAAGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720907       <-- ..................................................
FY432311       <-- ..................................................
EY934223       <-- ..................................................
EV574085       <-- ..................................................
FD568001       <-- ..................................................
FD567919       <-- ..................................................
FD583398       <-- ..................................................
FY431768       --> TCCTCCACATCCAAGGCGGCCAATGTGGAAACCAGATCGGCGCCAAGTTC
FD579411       --> ..................................................
FY443985       --> ..................................................
FD533385       --> ..................................................
EW717982       --> ..................................................
EY937996       --> ..................................................
EV569572       --> ..................................................
FD564431       --> ..................................................
FD564541       --> ..................................................
EV548557       --> ..................................................

               101    -    151
UN22988        --> TGGGAAGTCATCTGCGGCGAGCACGGGATCGACCACACCGGGCAGTACGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720907       <-- ..................................................
FY432311       <-- ..................................................
EY934223       <-- ..................................................
EV574085       <-- ..................................................
FD568001       <-- ..................................................
FD567919       <-- ..................................................
FD583398       <-- ..................................................
FY431768       --> TGGGAAGTCATCTGCGGCGAGCACGGGATCGACCACACCGGGCAGTACGT
FD579411       --> ..................................................
FY443985       --> ..................................................
FD533385       --> ..................................................
EW717982       --> ..................................................
EY937996       --> ..................................................
EV569572       --> ..................................................
FD564431       --> ..................................................
FD564541       --> ..................................................
EV548557       --> ..................................................

               151    -    201
UN22988        --> CGGCGACTCCCCTCTCCAGCTCGAGCGCATCGATGTCTATTTCAACGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720907       <-- ..................................................
FY432311       <-- ..................................................
EY934223       <-- ..................................................
EV574085       <-- ..................................................
FD568001       <-- ..................................................
FD567919       <-- ..................................................
FD583398       <-- ..................................................
FY431768       --> CGGCGACTCCCCTCTCCAGCTCGAGCGCATCGATGTCTATTTCAACGAGG
FD579411       --> ..................................................
FY443985       --> ..................................................
FD533385       --> ..................................................
EW717982       --> ..................................................
EY937996       --> ..................................................
EV569572       --> ..................................................
FD564431       --> ..................................................
FD564541       --> ..................................................
EV548557       --> ..................................................

               201    -    251
UN22988        --> CGAGCGGCGGGAAGTACGTCCCGCGCGCCGTCCTCATGGATCTGGAGCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720907       <-- ..................................................
FY432311       <-- ..................................................
EY934223       <-- ..................................................
EV574085       <-- ..................................................
FD568001       <-- ..................................................
FD567919       <-- ..................................................
FD583398       <-- ..................................................
FY431768       --> CGAGCGGCGGGAAGTACGTCCCGCGCGCCGTCCTCATGGATCTGGAGCCC
FD579411       --> ..................................................
FY443985       --> ..................................................
FD533385       --> ..................................................
EW717982       --> ..................................................
EY937996       --> ..................................................
EV569572       --> ..................................................
FD564431       --> ..................................................
FD564541       --> ..................................................
EV548557       --> ..................................................

               251    -    301
UN22988        --> GGGACGATGGATTCGCTCAGATCTGGGCCGTACGGGCAGATCTTCAGGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720907       <-- ..................................................
FY432311       <-- ..................................................
EY934223       <-- ..................................................
EV574085       <-- ..................................................
FD568001       <-- ..................................................
FD567919       <-- ..................................................
FD583398       <-- ..................................................
FY431768       --> GGGACGATGGATTCGCTCAGATCTGGGCCGTACGGGCAGATCTTCAGGCC
FD579411       --> ......................ggGGGCCGTACGGTCAGATCTTCAGGCC
FY443985       --> .............................GTACGGGCAGATCTTCAGGCC
FD533385       --> ..................................................
EW717982       --> ..................................................
EY937996       --> ..................................................
EV569572       --> ..................................................
FD564431       --> ..................................................
FD564541       --> ..................................................
EV548557       --> ..................................................

               301    -    351
UN22988        --> CGATAACTTCGTCTTTGGCCAGTCCGGCGCGGGGAACAACTGGGCGAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720907       <-- ..................................................
FY432311       <-- ..................................................
EY934223       <-- ..................................................
EV574085       <-- ..................................................
FD568001       <-- ..................................................
FD567919       <-- ..................................................
FD583398       <-- ..................................................
FY431768       --> CGATAACTTCGTCTTTGGCCAGTCCGGCGCGGGGAACAACTGGGCGAAAG
FD579411       --> CGATAACTTCGTCTTTGGCCGGTCCGGCGCCGGGAACAACTGGGCGAAAG
FY443985       --> CGATAACTTCGTCTTTGGCCAGTCCGGCGCGGGGAACAACTGGGCGAAAG
FD533385       --> ..................................................
EW717982       --> ..................................................
EY937996       --> ..................................................
EV569572       --> ..................................................
FD564431       --> ..................................................
FD564541       --> ..................................................
EV548557       --> ..................................................

               351    -    401
UN22988        --> GTCACTACACGGAGGGCGCTGAGCTGATCGATTCCGTGCTCGACGTCGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720907       <-- ..................................................
FY432311       <-- ..................................................
EY934223       <-- ..................................................
EV574085       <-- ..................................................
FD568001       <-- ..................................................
FD567919       <-- ..................................................
FD583398       <-- ..................................................
FY431768       --> GTCACTACACGGAGGGCGCTGAGCTGATCGATTCCGTCCTCGACGTCGTC
FD579411       --> GTCACTACACGGAGGGCGCTGAGCTGATCGATTCCGTGCTCGACGTCGTC
FY443985       --> GTCACTACACGGAGGGCGCTGAGCTGATCGATTCCGTCCTCGACGTCGTC
FD533385       --> .gCACTACACCGATGGCGCTGAGCTGATCGATTCCGTGCTCGACGTTGTC
EW717982       --> ..................................................
EY937996       --> ..................................................
EV569572       --> ..................................................
FD564431       --> ..................................................
FD564541       --> ..................................................
EV548557       --> ..................................................

               401    -    451
UN22988        --> AGGAAGGAAGCTGAGAACAGCGATTGTCTCCAAGGTTTCCAGGTTTGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720907       <-- ..................................................
FY432311       <-- ..................................................
EY934223       <-- ..................................................
EV574085       <-- ..................................................
FD568001       <-- ..................................................
FD567919       <-- ..................................................
FD583398       <-- ..................................................
FY431768       --> AGGAAGGAAGCTGAGAACAGCGATTGTCTCCAAGGTTTCCAGGTTTGTCA
FD579411       --> AGGAAGGAAGCTGAGAACAGCGATTGTCTCCAAGGTTTCCAGGTTTGTCA
FY443985       --> AGGAAGGAAGCTGAGAACAGCGATTGTCTCCAAGGTTTCCAGGTTTGTCA
FD533385       --> AGGAAGGAAGCTGAGAACAGCGATTGTCTCCAAGGTTTCCAGGTTTGTCA
EW717982       --> ..................................GTTTCCAGGTTTGTCA
EY937996       --> ..................................................
EV569572       --> ..................................................
FD564431       --> ..................................................
FD564541       --> ..................................................
EV548557       --> ..................................................

               451    -    501
UN22988        --> TTCATTGGGTGGAGGAACTGGATCTGGGATGGGAACGCTTTTGATCTCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720907       <-- ..................................................
FY432311       <-- ..................................................
EY934223       <-- ..................................................
EV574085       <-- ..................................................
FD568001       <-- ..................................................
FD567919       <-- ..................................................
FD583398       <-- ..................................................
FY431768       --> TTCATTGGGTGGAGGAACTGGATCTGGGATGGGAACGCTTTTGATCTCTA
FD579411       --> TTCGTTGGGTGGAGGAACTGGATCTGGGATGGGAACGCTTTTGATCTCTA
FY443985       --> TTCATTGGGTGGAGGAACTGGATCTGGGATGGGAACGCTTTTGATCTCTA
FD533385       --> TTCGTTGGGTGGAGGAACTGGATCTGGGATGGGAACGCTTTTGATCTCTA
EW717982       --> TTCATTGGGTGGAGGAACTGGATCTGGGATGGGAACGCTTTTGATCTCTA
EY937996       --> ..................................................
EV569572       --> ..................................................
FD564431       --> ..................................................
FD564541       --> ..................................................
EV548557       --> ..................................................

               501    -    551
UN22988        --> AGATAAGAGAGGAGTATCCTGACCGTATGATGATGACCTTCTCTGTGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720907       <-- ..................................................
FY432311       <-- ..................................................
EY934223       <-- ..................................................
EV574085       <-- ..................................................
FD568001       <-- ..................................................
FD567919       <-- ..................................................
FD583398       <-- ..................................................
FY431768       --> AGATAAGAGAGGAGTATCCTGACCGTATGATGATGACCTTCTCTGTGTTT
FD579411       --> AGATAAGAGAGGAGTATCCAGACCGTATGATGATGACCTTCTCTGTGTTT
FY443985       --> AGATAAGAGAGGAGTATCCTGACCGTATGATGATGACCTTCTCTGTGTTT
FD533385       --> AGATAAGAGAGGAGTATCCTGACCGTATGATGATGACCTTCTCTGTGTTT
EW717982       --> AGATAAGAGAGGAGTATCCTGACCGTATGATGATGACCTTCTCTGTGTTT
EY937996       --> ..................................................
EV569572       --> ..................................................
FD564431       --> ..................................................
FD564541       --> ..................................................
EV548557       --> ..................................................

               551    -    601
UN22988        --> CCTTCTCCCAAGGTCTCTGACACCGTCGTTGAGCCCTACAATGCAACTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720907       <-- ..................................................
FY432311       <-- ..................................................
EY934223       <-- ..................................................
EV574085       <-- ..................................................
FD568001       <-- ..................................................
FD567919       <-- ..................................................
FD583398       <-- ..................................................
FY431768       --> CCTTCTCCCAAGGTCTCTGACACCGTCGTTGAGCCCTACAATGCAACTCT
FD579411       --> CCTTCTCCCAAGGTCTCTGACACCGTCGTTGAGCCCTACAATGCAACTCT
FY443985       --> CCTTCTCCCAAGGTCTCTGACACCGTCGTTGAGCCCTACAATGCAACTCT
FD533385       --> CCTTCTCCCAAGGTCTCTGACACCGTCGTTGAGCCCTACAATGCAACTCT
EW717982       --> CCTTCTCCCAAGGTCTCTGACACCGTCGTTGAGCCCTACAATGCAACTCT
EY937996       --> ..................................................
EV569572       --> ..................................................
FD564431       --> ..................................................
FD564541       --> ..................................................
EV548557       --> ..................................................

               601    -    651
UN22988        --> CTCTGTGCATCAGCTCGTTGAGAACGCTGACGAGTGTATGGTTTTGGACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720907       <-- ..................................................
FY432311       <-- ..................................................
EY934223       <-- ..................................................
EV574085       <-- ..................................................
FD568001       <-- ..................................................
FD567919       <-- ..................................................
FD583398       <-- ..................................................
FY431768       --> CTCTGTGCATCAGCTCGTTGAGAACGCTGACGAGTGTATGGTTTTGGACA
FD579411       --> CTCTGTGCATCAGCTCGTTGAGAACGCTGACGAGTGTATGGTTTTGGACA
FY443985       --> CTCTGTGCATCAGCTCGTTGAGAACGCTGACGAGTGTATGGTTTTGGACA
FD533385       --> CTCTGTGCATCAGCTCGTTGAGAACGCTGACGAGTGTATGGTTTTGGACA
EW717982       --> CTCTGTGCATCAGCTCGTTGAGAACGCTGACGAGTGTATGGTTTTGGACA
EY937996       --> ..................................................
EV569572       --> ..................................................
FD564431       --> ..................................................
FD564541       --> ..................................................
EV548557       --> ..................................................

               651    -    701
UN22988        --> ATGAGGCTCTCTACGATATCTGTTTCCGTACCCTCAAGCTCGCTAATCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720907       <-- ..................................................
FY432311       <-- ..................................................
EY934223       <-- ..................................................
EV574085       <-- ..................................................
FD568001       <-- ..................................................
FD567919       <-- ..................................................
FD583398       <-- ..................................................
FY431768       --> ATGAGGCTCTCTACGATATCTGTTTCCGTACCCTCAAGCTCGCTAATCCC
FD579411       --> ATGAGGCTCTCTACGATATCTGTTTCCGTACCCTCAAGCTCGCTAATCCC
FY443985       --> ATGAGGCTCTCTACGATATCTGTTTCCGTACCCTCAAGCTCGCTAATCCC
FD533385       --> ATGAGGCTCTCTACGATATCTGTTTCCGTACCCTCAAGCTCGCTAATCCC
EW717982       --> ATGAGGCTCTCTACGATATCTGTTTCCGTACCCTCAAGCTCGCTAATCCC
EY937996       --> ..................................................
EV569572       --> ..................................................
FD564431       --> ..................................................
FD564541       --> ..................................................
EV548557       --> ..................................................

               701    -    751
UN22988        --> ACCTTTGGTGATCTTAACCACCTCATCTCGGCTACGATGAGTGGTGTTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720907       <-- .....................CTCATCTCGGCTACGATGAGTGGTGT-AC
FY432311       <-- ...................................GATGAGTGGTGTTAC
EY934223       <-- ..................................................
EV574085       <-- ..................................................
FD568001       <-- ..................................................
FD567919       <-- ..................................................
FD583398       <-- ..................................................
FY431768       --> ACCTTTGGTGATCTTAACCACCTCATCTCGGCTACGATGAGTGGTGTTAC
FD579411       --> ACCTTTGGTGACCTTAACCATCTTATCTCGGCTACAATGAGTGGTGTTAC
FY443985       --> ACCTTTGGTGATCTTAACCACCTCATCTCGGCTACGATGAGTGGTGTTAC
FD533385       --> ACCTTTGGTGATCTTAACCACCTCATCTCGGCTACGATGAGTGGTGTTAC
EW717982       --> ACCTTTGGTGATCTTAACCACCTCATCTCGGCTACGATGAGTGGTGTTAC
EY937996       --> ..................................................
EV569572       --> ..................................................
FD564431       --> ..................................................
FD564541       --> ..................................................
EV548557       --> ..................................................

               751    -    801
UN22988        --> ATGCTGTCTTCGTTTCCCTGGTCAGCTAAACTCCGACCTTAGGAAGCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720907       <-- ATGCTGTCTTCGTTTCC-TGGTCAGCTAAACTCTGACCT-AGGAAGCTTG  Raphanus sativus var. oleiformis
FY432311       <-- ATGCTGTCTTCGTTTCCCTGGTCAGCTAAACTCCGACCTTAGGAAGCTTG  Raphanus sativus cv GSK3-1
EY934223       <-- ......................................gTAGGAAGCTTG  Raphanus sativus cv Early Scarlet Globe
EV574085       <-- ................................................gG  Raphanus raphanistrum subsp. landra
FD568001       <-- ..................................................  Raphanus sativus var. oleiformis
FD567919       <-- ..................................................  Raphanus sativus var. oleiformis
FD583398       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY431768       --> ATGCTGTCTTCGTTTCCCTGGTCAGCTAAACTCCGACCTTAGGAAGCTTG  Raphanus sativus cv GSK3-1
FD579411       --> ATGCTGTCTTCGTTTCCCTGGTCAGCTAAACTCCGACCTTAGGAAGCGTG  Raphanus sativus cv Rat-Tail Radish #3870
FY443985       --> ATGCTGTCTTCGTTTCCCTGGTCAGCTAAACTCCGACCTTAGGAAGCTTG  Raphanus sativus cv GSK3-1
FD533385       --> ATGCTGTCTTCGTTTCCCTGGTCAGCTAAACTCTGACCTTAGGAAGCTTG  Raphanus raphanistrum subsp. maritimus
EW717982       --> ATGCTGTCTTCGTTTCCCTGGTCAGCTAAACTCTGACCTTAGGAAGCTTG  Raphanus sativus var. oleiformis
EY937996       --> ......................................gTAGGAAGCTTG  Raphanus sativus cv Early Scarlet Globe
EV569572       --> ................................................gG  Raphanus raphanistrum subsp. landra
FD564431       --> ..................................................  Raphanus sativus var. oleiformis
FD564541       --> ..................................................  Raphanus sativus var. oleiformis
EV548557       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               801    -    851
UN22988        --> CTGTGAACTTGATCCCTTTCCCGAGGCTCCACTTCTTCATGGTTGGTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720907       <-- CTGTGAACTTGATCCCTTTCCCGAGGCTCCACTTCTTCATGGTTGGTTTC
FY432311       <-- CTGTGAACTTGATCCCTTTCCCGAGGCTCCACTTCTTCATGGTTGGTTTC
EY934223       <-- CTGTGGACTTGATCCCTTTCCCGAGGCTCCACTTCTTCATGGTTGGTTTC
EV574085       <-- CTGTGAACTTGATCCCTTTCCCGAGGCTCCACTTCTTCATGGTTGGTTTC
FD568001       <-- ..................................................
FD567919       <-- ..................................................
FD583398       <-- ..................................................
FY431768       --> CTGTGAACTTGATCCCTTTCCCGAGGCTCCACTTCTTCATGGTTGGTTTC
FD579411       --> CTGTGAACTTGATCCCTTTCCCGAGGCTCCACTTCTTCATGGTTGGTTTC
FY443985       --> CTGTGAACTTGATCCCTTTCCCGAGGCTCCACTTCTTCATGGTTGGTTTC
FD533385       --> CTGTGAACTTGATCCCTTTCCCGAGGCTCCACTTCTTCATGGTTGGTTTC
EW717982       --> CTGTGAACTTGATCCCTTTCCCGAGGCTCCACTTCTTCATGGTTGGTTTC
EY937996       --> CTGTGGACTTGATCCCTTTCCCGAGGCTCCACTTCTTCATGGTTGGTTTC
EV569572       --> CTGTGAACTTGATCCCTTTCCCGAGGCTCCACTTCTTCATGGTTGGTTTC
FD564431       --> ..................................................
FD564541       --> ..................................................
EV548557       --> ..................................................

               851    -    901
UN22988        --> GCTCCATTGACGTCGAGAGGTTCGCAGCAGTACAGTGCTTTGAGTGTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720907       <-- GCTCCATTGACGTCGAGAGGTTCGCAGCAGTACAGTGCCTTGAGTGTCCC  Raphanus sativus var. oleiformis
FY432311       <-- GCTCCATTGACGTCGAGAGGTTCGCAGCAGTACAGTGCTTTGAGTGTCCC  Raphanus sativus cv GSK3-1
EY934223       <-- GCTCCATTGACGTCGAGAGGTTCGCAGCAGTACAGTGCTTTGAGTGTCCC  Raphanus sativus cv Early Scarlet Globe
EV574085       <-- GCTCCATTGACGTCGAGAGGTTCGCAGCAGTACAGTGCTTTGAGTGTCCC  Raphanus raphanistrum subsp. landra
FD568001       <-- ......gTGACGTCGAGAGGTTCGCAGCAGTACAGTGCCTTGAGTGTCCC  Raphanus sativus var. oleiformis
FD567919       <-- ..................................................  Raphanus sativus var. oleiformis
FD583398       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY431768       --> GCTCCATTGACGT.....................................  Raphanus sativus cv GSK3-1
FD579411       --> GCTCCATTGACGTCGAGAGGTTCGCAGCAGTACAGTGCCTTGAGTGTCCC  Raphanus sativus cv Rat-Tail Radish #3870
FY443985       --> GCTCCATTGACGTCGAGAGGTTCGCAGCAGTACAGTGCTTTGAGTGTCCC  Raphanus sativus cv GSK3-1
FD533385       --> GCTCCATTGACGTCGAGAGGTTCGCAGCAGTACAGTGCTTTGAGTGTCCC  Raphanus raphanistrum subsp. maritimus
EW717982       --> GCTCCATTGACGTCGAGAGGTTCGCAGCAGTACAGTGCCTTGAGTGTCCC  Raphanus sativus var. oleiformis
EY937996       --> GCTCCATTGACGTCGAGAGGTTCGCAGCAGTACAGTGCTTTGAGTGTCCC  Raphanus sativus cv Early Scarlet Globe
EV569572       --> GCTCCATTGACGTCGAGAGGTTCGCAGCAGTACAGTGCTTTGAGTGTCCC  Raphanus raphanistrum subsp. landra
FD564431       --> ......gTGACGTCGAGAGGTTCGCAGCAGTACAGTGCCTTGAGTGTCCC  Raphanus sativus var. oleiformis
FD564541       --> ......gTGACGTCGAGAGGTTCGCAGCAGTACAGTGCCTTGAGTGTCCC  Raphanus sativus var. oleiformis
EV548557       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               901    -    951
UN22988        --> TGAGCTGACCCAGCAGATGTGGGACGCGAAGAACATGATGTGCGCTGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720907       <-- TGAGCTGACACAGCAGATGTGGGACGCGAAGAACATGATGTGCGCTGCTG  Raphanus sativus var. oleiformis
FY432311       <-- TGAGCTGACCCAGCAGATGTGGGACGCGAAGAACATGATGTGCGCTGCTG  Raphanus sativus cv GSK3-1
EY934223       <-- TGAGCTGACCCAGCAGATGTGGGACGCGAAGAACATGATGTGCGCTGCTG  Raphanus sativus cv Early Scarlet Globe
EV574085       <-- TGAGCTGACCCAGCAGATGTGGGACGCGAAGAACATGATGTGCGCTGCTG  Raphanus raphanistrum subsp. landra
FD568001       <-- TGAGCTGACACAGCAGATGTGGGACGCGAAGAACATGATGTGCGCTGCTG  Raphanus sativus var. oleiformis
FD567919       <-- ........caCAGCAGATGTGGGACGCGAAGAACATGATGTGCGCTGCTG  Raphanus sativus var. oleiformis
FD583398       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY431768       --> ..................................................  Raphanus sativus cv GSK3-1
FD579411       --> TGAGCTGACACAGCAGATGTGGGACGCGAAGAACATGATGTGCGCTGCTG  Raphanus sativus cv Rat-Tail Radish #3870
FY443985       --> TGAGCTGACCCAGCAGATGTGGGACGCGAAGAACATGATGTGCGCTGCTG  Raphanus sativus cv GSK3-1
FD533385       --> TGAGCTGACCCAGCAGATGTGGGACGCGAAGAACATGATGTGCGCTGCTG  Raphanus raphanistrum subsp. maritimus
EW717982       --> TGAGCTGACACAGCAGATGTGGGACGCGAAGAACATGATGTGCGCTGCTG  Raphanus sativus var. oleiformis
EY937996       --> TGAGCTGACCCAGCAGATGTGGGACGCGAAGAACATGATGTGCGCTGCTG  Raphanus sativus cv Early Scarlet Globe
EV569572       --> TGAGCTGACCCAGCAGATGTGGGACGCGAAGAACATGATGTGCGCTGCTG  Raphanus raphanistrum subsp. landra
FD564431       --> TGAGCTGACACAGCAGATGTGGGACGCGAAGAACATGATGTGCGCTGCTG  Raphanus sativus var. oleiformis
FD564541       --> TGAGCTGACACAGCAGATGTGGGACGCGAAGAACATGATGTGCGCTGCTG  Raphanus sativus var. oleiformis
EV548557       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               951    -   1001
UN22988        --> ACCCTCGCCACGGACGTTACTTAACCGCATCCGCTGTGTTCCGTGGGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720907       <-- ACCCTCGCCACGGACGTTACTTAACCGCATCCGCTGTGTTCCGTGGGAAG
FY432311       <-- ACCCTCGCCACGGACGTTACTTAACCGCATCCGCTGTGTTCCGTGGGAAG
EY934223       <-- ACCCTCGCCACGGACGTTACTTAACCGCATCCGCTGTGTTCCGTGGGAAG
EV574085       <-- ACCCTCGCCACGGACGTTACTTAACCGCATCCGCTGTGTTCCGTGGGAAG
FD568001       <-- ACCCTCGCCACGGACGTTACTTAACCGCATCCGCTGTGTTCCGTGGGAAG
FD567919       <-- ACCCTCGCCACGGACGTTACTTAACCGCATCCGCTGTGTTCCGTGGGAAG
FD583398       <-- ..................................................
FY431768       --> ..................................................
FD579411       --> ACC-TCGCCACAGACGTTACTTAACCGCATCCGCTGT-TTCCGTGGGAAG
FY443985       --> ACCCTCGCCACGGACGTTACTTAACCGCATCCGCTGTGTTCCGTGGGAAG
FD533385       --> ACCCTCGCCACGGACGTTACTTAACCGCATCCGCTGTG............
EW717982       --> ACCCTCGCCACGGACGTTACTTAACCGCATCCGCTGTGTTCCGTGGGAAG
EY937996       --> ACCCTCGCCACGGACGTTACTTAACCGCATCCGCTGTGTTCCGTGGGAAG
EV569572       --> ACCCTCGCCACGGACGTTACTTAACCGCATCCGCTGTGTTCCGTGGGAAG
FD564431       --> ACCCTCGCCACGGACGTTACTTAACCGCATCCGCTGTGTTCCGTGGGAAG
FD564541       --> ACCCTCGCCACGGACGTTACTTAACCGCATCCGCTGTGTTCCGTGGGAAG
EV548557       --> ..................................................

               1001   -   1051
UN22988        --> CTGAGCACTAAGGAGGTGGATGAGCAGATGATGAACATCCAGAACAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720907       <-- CTGAGCACTAAGGAGGTCGATGAGCAGATGTTGAACATCCAGAACAAGAA  Raphanus sativus var. oleiformis
FY432311       <-- CTGAGCACTAAGGAGGTGGATGAGCAGATGATGAACATCCAGAACAAGAA  Raphanus sativus cv GSK3-1
EY934223       <-- CTGAGCACTAAGGAGGTGGATGAGCAGATGATGAACATCCAGAACAAGAA  Raphanus sativus cv Early Scarlet Globe
EV574085       <-- CTGA--GTTAAGGAGGTGGATGAGCAGATGATGAACATCCAGAACAAGAA  Raphanus raphanistrum subsp. landra
FD568001       <-- CTGAGCACTAAGGAGGTTGATGAGCAGATGATGAACATCCAGAACAAGAA  Raphanus sativus var. oleiformis
FD567919       <-- CTGAGCACTAAGGAGGTTGATGAGCAGATGATGAACATCCAGAACAAGAA  Raphanus sativus var. oleiformis
FD583398       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY431768       --> ..................................................  Raphanus sativus cv GSK3-1
FD579411       --> CTGAGCAC..........................................  Raphanus sativus cv Rat-Tail Radish #3870
FY443985       --> CTGAGCACTAAGGAGGTGGATGAGCAGATGATGAACATCCAGAACAAGAA  Raphanus sativus cv GSK3-1
FD533385       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW717982       --> CTGAGCACTAAGGAGGTCGATGAGCAGATGTTGAACATCCAGAACAAGAA  Raphanus sativus var. oleiformis
EY937996       --> CTGAGCACTAAGGAGGTGGATGAGCAGATGATGAACATCCAGAACAAGAA  Raphanus sativus cv Early Scarlet Globe
EV569572       --> CTGAG--TTAAGGAGGTGGATGAGCAGATGATGAACATCCAGAACAAGAA  Raphanus raphanistrum subsp. landra
FD564431       --> CTGAGCACTAAGGAGGTTGATGAGCAGATGATGAACATCCAGAACAAGAA  Raphanus sativus var. oleiformis
FD564541       --> CTGAGCACTAAGGAGGTTGATGAGCAGATGATGAACATCCAGAACAAGAA  Raphanus sativus var. oleiformis
EV548557       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               1051   -   1101
UN22988        --> CTCGTCCTACTTTGTGGAGTGGATCCCGAACAACGTCAAGTCCAGCGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720907       <-- CTCGTCCTACTTTGTGGAGTGGATCCCGAACAACGTCAAGTCCAGCGTCT
FY432311       <-- CTCGTCCTACTTTGTGGAGTGGATCCCGAACAACGTCAAGTCCAGCGTCT
EY934223       <-- CTCGTCCTACTTTGTGGAGTGGATCCCGAACAACGTCAAGTCCAGCGTCT
EV574085       <-- CTCGTCCTACTTTGTGGAGCGGATCCCGAACAACGTCAAGTCCAGCGTCT
FD568001       <-- CTCGTCCTACTTTGTGGAGTGGATCCCGAACAACGTCAAGTCCAGCGTCT
FD567919       <-- CTCGTCCTACTTTGTGGAGTGGATCCCGAACAACGTCAAGTCCAGCGTCT
FD583398       <-- ..................................................
FY431768       --> ..................................................
FD579411       --> ..................................................
FY443985       --> CTCGTCCTACTTTGTGGAGTGGATCCCGAACAACGTCAAGTCCAGCGTCT
FD533385       --> ..................................................
EW717982       --> CTCGTCCTACTTTGTGGAGTGGATCCCGAACAACGTCAAGTCCAGCGTCT
EY937996       --> CTCGTCCTACTTTGTGGAGTGGATCCCGAACAACGTCAAGTCCAGCGTCT
EV569572       --> CTCGTCCTACTTTGTGGAGCGGATCCCGAACAACGTCAAGTCCAGCGTCT
FD564431       --> CTCGTCCTACTTTGTGGAGTGGATCCCGAACAACGTCAAGTCCAGCGTCT
FD564541       --> CTCGTCCTACTTTGTGGAGTGGATCCCGAACAACGTCAAGTCCAGCGTCT
EV548557       --> ..................................................

               1101   -   1151
UN22988        --> GTGACATTGCGCCGACGGGTTTGAAAATGGCGTCGACTTTCATCGGGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720907       <-- GTGACATTGCGCCGACGGGTTTGAAAATGGCTTCGACTTTCATTGGGAAC
FY432311       <-- GTGACATTGCACCGACGGGTTTGAAAATGGCGTCGACTTTCATCGGGAAC
EY934223       <-- GTGACATTGCGCCGACGGGTTTGAAAATGGCGTCGACTTTCATCGGGAAC
EV574085       <-- GTGACATTGCGCCGACGGGTTTGAAAATGGCGTCGACTTTCATCGGGAAC
FD568001       <-- GTGACATTGCGCCAACGGGTTTGAAAATGGCGTCGACTTTCATCGGGAAC
FD567919       <-- GTGACATTGCGCCAACGGGTTTGAAAATGGCGTCGACTTTCATCGGGAAC
FD583398       <-- ..................................................
FY431768       --> ..................................................
FD579411       --> ..................................................
FY443985       --> GTGACATTGCACCG....................................
FD533385       --> ..................................................
EW717982       --> GTGAC-TTGCGCCGACGGGTT-G-AAATGGCTTCGACTTTCATTGGGA-C
EY937996       --> GTGACATTGCGCCGACGGGTTTGAAAATGGCGTCGACTTTCATCGGGAAC
EV569572       --> GTGACATTGCGCCGACGGGTTTGAAAATGGCGTCGACTTTCATCGGGAAC
FD564431       --> GTGACATTGCGCCAACGGGTTTGAAAATGGCGTCGACTTTCATCGGGAAC
FD564541       --> GTGACATTGCGCCAACGGGTTTGAAAATGGCGTCGACTTTCATCGGGAAC
EV548557       --> ..................................................

               1151   -   1201
UN22988        --> TCTACTTCGATCCAGGAGATGTTCAGGCGTGTGAGTGAGCAGTTCACAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720907       <-- TCTACTTCGATCCAGGAGATGTTCAGGCGTGTGAGTGAGCAGTTCACAGC  Raphanus sativus var. oleiformis
FY432311       <-- TCTACCTCGATCCAGGAAATGTTTAGGCGTGTGAGTGAGCAGTTCACAGC  Raphanus sativus cv GSK3-1
EY934223       <-- TCCACCTCGATCCAGGAGATGTTCAGGCGTGTGAGTGAGCAGTTCACAGC  Raphanus sativus cv Early Scarlet Globe
EV574085       <-- TCCACCTCGATCCAGGAGATGTTCAGGCGTGTGAGTGAGCAGTTCACAGC  Raphanus raphanistrum subsp. landra
FD568001       <-- TTTACTTCGATCCAGGAGATGTTCAGGCGTGTGAGTGAGCAGTTCACGGC  Raphanus sativus var. oleiformis
FD567919       <-- TCTACTTCGATCCAGGAGATGTTCAGGCGTGTGAGTGAGCAGTTCACGGC  Raphanus sativus var. oleiformis
FD583398       <-- .......................CAGGCGTGTGAGTGAGCAGTTCACAGC  Raphanus sativus cv Rat-Tail Radish #3870
FY431768       --> ..................................................  Raphanus sativus cv GSK3-1
FD579411       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY443985       --> ..................................................  Raphanus sativus cv GSK3-1
FD533385       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW717982       --> TCTACTcga.........................................  Raphanus sativus var. oleiformis
EY937996       --> TCCACCTCGATCCAGGAGATGTTCAGGCGTGTGAGTGAGCAGTTCACAGC  Raphanus sativus cv Early Scarlet Globe
EV569572       --> TCCACCTCGATCCAGGAGATGTTCAGGCGTGTGAGTGAGCAGTTCACAGC  Raphanus raphanistrum subsp. landra
FD564431       --> TCTACTTCGATCCAGGAGATGTTCAGGCGTGTGAGTGAGCAGTTCACGGC  Raphanus sativus var. oleiformis
FD564541       --> TCTACTTCGATCCAGGAGATGTTCAGGCGTGTGAGTGAGCAGTTCACGGC  Raphanus sativus var. oleiformis
EV548557       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               1201   -   1251
UN22988        --> TATGTTCAGGAGGAAGGCTTTCCTTCATTGGTACACGGGAGAAGGCATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720907       <-- TATGTTCAGGAGGAAGGCTTTCCTTCACTGGTACACGGGAGAAGGCATGG
FY432311       <-- TATGTTCAGGAGGAAGGCTTTCCTTCATTGGTACACGGGAGAAGGCATGG
EY934223       <-- TATGTTCAGGAGGAAGGCTTTCCTTCATTGGTACACGGGAGAAGGCATGG
EV574085       <-- TATGTTCAGGAGGAAGGCTTTCCTTCATTGGTACACGGGAGAAGGCATGG
FD568001       <-- TATGTTCAGGAGGAAGGCTTTCCTTCATTGGTACACGGGAGAAGGCATGG
FD567919       <-- TATGTTCAGGAGGAAGGCTTTCCTTCATTGGTACACGGGAGAAGGCATGG
FD583398       <-- TATGTTCAGGAGGAAGGCTTTCCTTCACTGGTACACGGGAGAAGGCATGG
FY431768       --> ..................................................
FD579411       --> ..................................................
FY443985       --> ..................................................
FD533385       --> ..................................................
EW717982       --> ..................................................
EY937996       --> TATGTTCAGGAGGAAGGCTTTCCTTCATTGGTACACGGGAGAAGGCATGG
EV569572       --> TATGTTCAGGAGGAAGGCTTTCCTTCATTGGTACACGGGAGAAGGCATGG
FD564431       --> TATGTTCAGGAGGAAGGCTTTCCTTCATTGGTACACGGGAGAAGGCATGG
FD564541       --> TATGTTCAGGAGGAAGGCTTTCCTTCATTGGTACACGGGAGAAGGCATGG
EV548557       --> ..................................................

               1251   -   1301
UN22988        --> ACGAGATGGAGTTCACCGAGGCGGAGAGTAACATGAATGATCTTGTTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720907       <-- ACGAGATGGAGTTCACCGAAGCGGAGAGTAACATGAATGATCTTGTTGCA
FY432311       <-- ACGAGATGGAGTTCACCGAGGCGGAGAGTAACATGAATGATCTTGTTGCA
EY934223       <-- ACGAGATGGAGTTCACCGAGGCGGAGAGTAACATGAATGATCTTGTTGCA
EV574085       <-- ACGAGATGGAGTTCACCGAGGCGGAGAGTAACATGAATGATCTTGTTGCA
FD568001       <-- ACGAGATGGAGTTCACCGAGGCGGAGAGTAACATGAATGATCTTGTTGCA
FD567919       <-- ACGAGATGGAGTTCACCGAGGCGGAGAGTAACATGAATGATCTTGTTGCA
FD583398       <-- ACGAGATGGAGTTCACCGAAGCGGAGAGTAACATGAATGATCTTGTTGCA
FY431768       --> ..................................................
FD579411       --> ..................................................
FY443985       --> ..................................................
FD533385       --> ..................................................
EW717982       --> ..................................................
EY937996       --> ACGAGATGGAGTTCACCGAGGCGGAGAGTAACATGAATGATCTTGTTGCA
EV569572       --> ACGAGATGGAGTTCACCGAGGCGGAGAGTAACATGAATGATCTTGTTGCA
FD564431       --> ACGAGATGGAGTTCACCGAGGCGGAGAGTAACATGAATGATCTTGTTGCA
FD564541       --> ACGAGATGGAGTTCACCGAGGCGGAGAGTAACATGAATGATCTTGTTGCA
EV548557       --> ..................................................

               1301   -   1351
UN22988        --> GAGTATCAGCAGTACCAGGATGCGACAGCCGGTGAGGAGGAGTATGAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720907       <-- GAGTATCAGCAGTACCAGGATGCGACAGCCGGTGAGGAGGAGTATGAGGA
FY432311       <-- GAGTATCAGCAGTACCAGGATGCGACAGCCGGTGAGGAGGAGTATGAGGA
EY934223       <-- GAGTATCATCAGTACCAGGATGCGACAGCCGGTGAGGAGGAGTATGAGGA
EV574085       <-- GAGTATCAGCAGTACCAGGATGCGACAGCCGGTGAGGAGGAGTATGAGGA
FD568001       <-- GAGTATCAGCAGTACCAGGATGCGACAGCCGGTGAGGAGGAGTATGAGGA
FD567919       <-- GAGTATCAGCAGTACCAGGATGCGACAGCCGGTGAGGAGGAGTATGAGGA
FD583398       <-- GAGTATCAGCAGTACCAGGATGCGACAGCCGGTGAGGAGGAGTATGAGGA
FY431768       --> ..................................................
FD579411       --> ..................................................
FY443985       --> ..................................................
FD533385       --> ..................................................
EW717982       --> ..................................................
EY937996       --> GAGTATCATCAGTACCAGGATGCGACAGCCGGTGAGGAGGAGTATGAGGA
EV569572       --> GAGTATCAGCAGTACCAGGATGCGACAGCCGGTGAGGAGGAGTATGAGGA
FD564431       --> GAGTATCAGCAGTACCAGGATGCGACAGCCGGTGAGGAGGAGTATGAGGA
FD564541       --> GAGTATCAGCAGTACCAGGATGCGACAGCCGGTGAGGAGGAGTATGAGGA
EV548557       --> ..........gGTACCAGGATGCGACAGCCGGTGAGGAGGAGTATGAGGA

               1351   -   1401
UN22988        --> GGAAGAAGAGGAGTACGATGAGGCTTGAGATGTCGTCAGTGGCTTCGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720907       <-- GGAAGAAGAGGAGTACGATGAGGCTTGAGATGTCGTCAGTGGCTTCGTCT
FY432311       <-- GGAAGAAGAGGAGTACGATGAGGCTTGAGATGTCGTCAGTGGCTTCGTCT
EY934223       <-- GGAAGAAGAGGAGTACGATGAGGCTTGAGATGTCGTCAGTGGCTTCGTCT
EV574085       <-- GGAAGAAGAGGAGTACGATGAGGCTTGAGATGTCGTCAGTGGCTTCGTCT
FD568001       <-- GGAAGAAGAGGAGTACGATGAGGCTTGAGATGTCGTCAGTGGCTTCGTTT
FD567919       <-- GGAAGAAGAGGAGTACGATGAGGCTTGAGATGTCGTCAGTGGCTTCGTTT
FD583398       <-- GGAAGAAGAGGAGTACGATGAGGCTTGAGATGTCGTCAGTGGCT......
FY431768       --> ..................................................
FD579411       --> ..................................................
FY443985       --> ..................................................
FD533385       --> ..................................................
EW717982       --> ..................................................
EY937996       --> GGAAGAAGAGGAGTACGATGAGGCTTGAGATGTCGTCAGTGGCTTCGTCT
EV569572       --> GGAAGAAGAGGAGTACGATGAGGCTTGAGATGTCGTCAGTGGCTTCGTCT
FD564431       --> GGAAGAAGAGGAGTACGATGAGGCTTGAGATGTCGTCAGTGGCTTCGTCT
FD564541       --> GGAAGAAGAGGAGTACGATGAGGCTTGAGATGTCGTCAGTGGCTTCGTCT
EV548557       --> GGAAGAAGAGGAGTACGATGAGGCTTGAGATGTCGTCAGTGGCTTCGTCT

               1401   -   1451
UN22988        --> GATTCATAAAGCTT--AA-AGA--CTCTCCTTTTGTTTTGCTTTTTTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720907       <-- GATTCATAA-GCAT--AAGACT--CTCTCCTTTTGTTTTGCTTTTTTCAG  Raphanus sativus var. oleiformis
FY432311       <-- GATTCATAA-GCTTTTAA-AGATTCTCTCCTTTTGTTTTGCTTTTTTCAG  Raphanus sativus cv GSK3-1
EY934223       <-- GATTCATAAAGCTT--AA-AGA--CTCTCCTTTTGTTTTGCTTTTTTCAG  Raphanus sativus cv Early Scarlet Globe
EV574085       <-- GATTCATAAAGCTT--AA-AGA--CTCTCCTTTTGTTTTGCTTTTTTCAG  Raphanus raphanistrum subsp. landra
FD568001       <-- GATTCATAAAGCTT--AAGACT--CTCTCCTTTTGTTTTGCTTTTT-CAG  Raphanus sativus var. oleiformis
FD567919       <-- GATTCATAAAGCTT--AAGACT--CTCTCCTTTTGTTTTGCTTTTT-CAG  Raphanus sativus var. oleiformis
FD583398       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY431768       --> ..................................................  Raphanus sativus cv GSK3-1
FD579411       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY443985       --> ..................................................  Raphanus sativus cv GSK3-1
FD533385       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW717982       --> ..................................................  Raphanus sativus var. oleiformis
EY937996       --> GATTCATAAAGCTT--AA-AGA--CTCTCCTTTTGTTTTGCTTTTTTCAG  Raphanus sativus cv Early Scarlet Globe
EV569572       --> GATTCATAAAGCTT--AA-AGA--CTCTCCTTTTGTTTTGCTTTTTTCAG  Raphanus raphanistrum subsp. landra
FD564431       --> GATTCATAAAGCTT--AAGACT--CTCTCCTTTTGTTTTGCTTTTT-CAG  Raphanus sativus var. oleiformis
FD564541       --> GATTCATAAAGCTT--AAGACT--CTCTCCTTTTGTTTTGCTTTTT-CAG  Raphanus sativus var. oleiformis
EV548557       --> GATTCATAAAGCTT--AA-AGA--CTCTCCTTTTGTTTTGCTTTTTTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)

               1451   -   1501
UN22988        --> TTTGTGTGCTTTTGTTCGTGAAACCCAAATTCGTTCTGGATTGTTAAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720907       <-- TTTGTGTGCTTT-GTTCGTGAAACCCAAATTCGTTCTGGATTGTTAAAAC  Raphanus sativus var. oleiformis
FY432311       <-- TTTGTGTGCTTTTGTTCGTGAAACCCAAATTCGTTCTGGATTGTTAAAAC  Raphanus sativus cv GSK3-1
EY934223       <-- TTTGTGTGCTTTTGTTCGTGAAACCCAAATTCGTTCTGGATTGTTAAAAC  Raphanus sativus cv Early Scarlet Globe
EV574085       <-- TTTGTGTGCTTTTGTTCGTGAAACCCAAATTCGTTCTGGATTGTTAAAAC  Raphanus raphanistrum subsp. landra
FD568001       <-- TTTGTGTGCTTT-GTTCGTGAAACCCAAATTCGTTCTGGATTGTTAAAAC  Raphanus sativus var. oleiformis
FD567919       <-- TTTGTGTGCTTT-GTTCGTGAAACCCAAATTCGTTCTGGATTGTTAAAAC  Raphanus sativus var. oleiformis
FD583398       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY431768       --> ..................................................  Raphanus sativus cv GSK3-1
FD579411       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY443985       --> ..................................................  Raphanus sativus cv GSK3-1
FD533385       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW717982       --> ..................................................  Raphanus sativus var. oleiformis
EY937996       --> TTTGTGTGCTTTTGTTCGTGAAACCCAAATTCGTTCTGGATTGTTAAA-C  Raphanus sativus cv Early Scarlet Globe
EV569572       --> TTTGTGTGCTTTTGTTCGTGAAACCCAAATTCGTTCTGGATTGTTAAAAC  Raphanus raphanistrum subsp. landra
FD564431       --> TTTGTGTGCTTT-GTTCGTGAAACCCAAATTCGTTCTGGATTGTTAAAAC  Raphanus sativus var. oleiformis
FD564541       --> TTTGTGTGCTTT-GTTCGTGAAACCCAAATTCGTTCTGGATTGTTAAAAC  Raphanus sativus var. oleiformis
EV548557       --> TTTGTGTGCTTTTGTTCGTGAAACCCAAATTCGTTCTGGATTGTTAAAAC  Raphanus raphanistrum subsp. raphanistrum (NY)

               1501   -   1551
UN22988        --> GTTTGCGTGTGTATTGGTTTATTGTTTTCGTCAAGTGAAAAATATTGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720907       <-- GTTTGCGTGTGTATTGGTTTATTGTTTTCGTCAAGTGAAAAATATTGCTT
FY432311       <-- GTTTGCGTGTGTATTGGTTTAT-GTTTTCGTC..................
EY934223       <-- GTTTGCGTGTGTATTGGTTTATTGTTTTCGTCAAGTGAAAAATATTGCTT
EV574085       <-- GTTTGCGTGTGTATTGGTTTATTGTTTTCGTCAAGT..............
FD568001       <-- GTTTGCGTGTGTACTGGTTTATTGTTTTCGTCAAGTGAAAAATATTGCTT
FD567919       <-- GTTTGCGTGTGTACTGGTTTATTGTTTTCGTCAAGTGAAAAATATTGCTT
FD583398       <-- ..................................................
FY431768       --> ..................................................
FD579411       --> ..................................................
FY443985       --> ..................................................
FD533385       --> ..................................................
EW717982       --> ..................................................
EY937996       --> GTTTGCGTGTGTATTGGTTTATTGTTTTCGTCA-GTGAAAAA........
EV569572       --> GTTTGCGTGTGTATTGGTTTATTGTTTTCGTCAAGT..............
FD564431       --> GTTTGCGTGTGTACTGGTTTATTGTTTTCGTCAAGTGAAAAA........
FD564541       --> GTTTGCGTGTGTACTGGTTTATTGTTTTCGTCAAGTGAAAA-TATTGCTT
EV548557       --> GTTTGCGTGTGTATTGGTTTATTGTTTTCGTC..................

               1551   -   1601
UN22988        --> ATGTTCTTTCAG
                   ~~~~~~~~~~~~
EW720907       <-- TTGTT.......
FY432311       <-- ............
EY934223       <-- TTGTTCTTTCg.
EV574085       <-- ............
FD568001       <-- ATGTTCTTTCAG
FD567919       <-- ATGTTCTTTCAG
FD583398       <-- ............
FY431768       --> ............
FD579411       --> ............
FY443985       --> ............
FD533385       --> ............
EW717982       --> ............
EY937996       --> ............
EV569572       --> ............
FD564431       --> ............
FD564541       --> ATGTTCTTTCAG
EV548557       --> ............