Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN22990

               1      -     51
UN22990        --> GGACCAACCAAGTGTGTATCTTTCTCCGCCTATCTCTTTCTCTCTCTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766980       <-- ..................................................
EY927786       <-- ..................................................
FD565036       <-- ..................................................
FD579777       --> GGACCAACCAAGTGTGTATCTTTCTCCGCCTATCTCTTTCTCTCTCTCTC
EY931950       --> ...ggaagCAAGTGTGTATCTTTCTCCGCCTATCTCTTTCTCTCTCTCTC
HS107008       --> ....................gcacgagGCCTATCTCTTTCTCTCTCTCTC
EX762788       --> ........................tttttctccgcctaTCTCTTTCTCTC
FY445538       --> ................................................TC
FY437265       --> ..................................................
FY437357       --> ..................................................
FY453684       --> ..................................................
FD548548       --> ..................................................
FD560670       --> ..................................................
FY429770       --> ..................................................
EY930073       --> ..................................................

               51     -    101
UN22990        --> TCTGCGGAATCTCTTCTTCTCGTTTCGAGTCCGTAAGATCCCC-TCGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766980       <-- ..................................................
EY927786       <-- ..................................................
FD565036       <-- ..................................................
FD579777       --> T--GAGGAATCTCTTCTTCTCATTTCGAGTCCGTAAGATCCCC-TCGAAA
EY931950       --> TCTGCGGAATCTCTTCTTCTCGTTTCGAGTCCGTAAGATCCCC-TCGAAA
HS107008       --> TCTGCGGAATCTCTTCTTCTCGTTTCGAGTCCGTAAGATCCCC-TCGAAA
EX762788       --> TCTGCGGAATCTCTTCTTCTCGTTTTGAGTCCGTAAGATCCCCCTCGAAA
FY445538       --> TCTGCGGAATCTCTTCTTCTCGTTTCGAGTCCGTAAGATCCCC-TCGAAA
FY437265       --> .....cggATCTCTTCTTCTCGTTTCGAGTCCGTAAGATCCCC-TCGAAA
FY437357       --> ......ggATCTCTTCTTCTCGTTTCGAGTCCGTAAGATCCCC-TCGAAA
FY453684       --> ...........TCTTCTTCTCGTTTCGAGTCCGTAAGATCCCC-TCGAAA
FD548548       --> ..................................................
FD560670       --> ..................................................
FY429770       --> ..................................................
EY930073       --> ..................................................

               101    -    151
UN22990        --> ACAAAAAAAGAGATGGCGGAGGAGAAGAAAGTCGCCCCGATTGGTGTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766980       <-- ..................................................
EY927786       <-- ..................................................
FD565036       <-- ..................................................
FD579777       --> ACAAAAAA-GAGATGGCGGAGGAGAAGAAAGTCGCCCCGATTGGTGTCTG
EY931950       --> ACAAAAAAAGAGATGGCGGAGGAGAAGAAAGTCGCCCCGATTGGTGTCTG
HS107008       --> ACAAAAAAAGAGATGGCGGAGGAGAAGAAAGTCGCCCCGATTGGTGTCTG
EX762788       --> ACAAAAAA-GAGATGGCGGAGGAGAAGAAAGTTGCCCCGATTGGTGTGTG
FY445538       --> ACAAAAAAAGAGATGGCGGAGGAGAAGAAAGTCGCCCCGATTGGTGTCTG
FY437265       --> ACAAAAAAAGAGATGGCGGAGGAGAAGAAAGTCGCCCCGATTGGTGTCTG
FY437357       --> ACAAAAAAAGAGATGGCGGAGGAGAAGAAAGTCGCCCCGATTGGTGTCTG
FY453684       --> ACAAAAAAAGAGATGGCGGAGGAGAAGAAAGTCGCCCCGATTGGTGTCTG
FD548548       --> ..................................................
FD560670       --> ..................................................
FY429770       --> ..................................................
EY930073       --> ..................................................

               151    -    201
UN22990        --> GACCGCCGTGAAGCCCTTCGTCAATGGCGGAGCCTCCGGTATGCTCGCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766980       <-- ..................................................
EY927786       <-- ..................................................
FD565036       <-- ..................................................
FD579777       --> GACCGCCGTGAAGCCCTTCGTCAATGGCGGAGCCTCCGGTATGCTCGCGA
EY931950       --> GACCGCCGTGAAGCCCTTCGTCAATGGCGG-GCCTCCGGTATGCTCGCGA
HS107008       --> GACCGCCGTGAAGCCCTTCGTCAATGGCGGAGCCTCCGGTATGCTCGCGA
EX762788       --> GACCGCCGTGAAGCCCTTCGTCAATGGCGGAGCCTCCGGTATGCTCGCGA
FY445538       --> GACCGCCGTGAAGCCCTTCGTCAATGGCGGAGCCTCCGGTATGCTCGCGA
FY437265       --> GACCGCCGTGAAGCCCTTCGTCAATGGCGGAGCCTCCGGTATGCTCGCGA
FY437357       --> GACCGCCGTGAAGCCCTTCGTCAATGGCGGAGCCTCCGGTATGCTCGCGA
FY453684       --> GACCGCCGTGAAGCCCTTCGTCAATGGCGGAGCCTCCGGTATGCTCGCGA
FD548548       --> ..................................................
FD560670       --> ..................................................
FY429770       --> ..................................................
EY930073       --> ..................................................

               201    -    251
UN22990        --> CTTGCGTCATCCAGCCGATTGACATGATCAAGGTGAGGATTCAACTAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766980       <-- ..................................................
EY927786       <-- ..................................................
FD565036       <-- ..................................................
FD579777       --> CTTGCGTCATCCAGCCGATTGACATGATCAAGGTGAGGATTCAACTAGGT
EY931950       --> CTTGCGTCATCCAGCCGATTGACATGATCAAGGTGAGGATTCAACTAGGT
HS107008       --> CTTGCGTCATCCAGCCGATTGACATGATCAAGGTGAGGATTCAACTAGGT
EX762788       --> CTTGCGTCATCCAGCCGATTGACATGATCAAGGTGAGGATTCAACTAGGT
FY445538       --> CTTGCGTCATCCAGCCGATTGACATGATCAAGGTGAGGATTCAACTAGGT
FY437265       --> CTTGCGTCATCCAGCCGATTGACATGATCAAGGTGAGGATTCAACTAGGT
FY437357       --> CTTGCGTCATCCAGCCGATTGACATGATCAAGGTGAGGATTCAACTAGGT
FY453684       --> CTTGCGTCATCCAGCCGATTGACATGATCAAGGTGAGGATTCAACTAGGT
FD548548       --> ..................................................
FD560670       --> ..................................................
FY429770       --> ..................................................
EY930073       --> ..................................................

               251    -    301
UN22990        --> CAGGGATCTGCAGCCAGTGTGACCAAGAACATGTTGAAGAATGATGGTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766980       <-- ..................................................
EY927786       <-- ..................................................
FD565036       <-- ..................................................
FD579777       --> CAGGGATCTGCAGCAAGTGTGACCAAGAACATGTTGAAGAATGATGGTAT
EY931950       --> CAGGGATCTGCAGCCAGTGTGACCAAGAACATGTTGAAGAATGATGGTAT
HS107008       --> CAGGGATCTGCAGCCAGTGTGACCAAGAACATGTTGAAGAATGATGGTAT
EX762788       --> CAGGGATCTGCAGCCAGTGTGACCAAGAACATGTTGAAGAATGATGGTAT
FY445538       --> CAGGGATCTGCAGCCAGTGTGACCAAGAACATGTTGAAGAATGATGGTAT
FY437265       --> CAGGGATCTGCAGCCAGTGTGACCAAGAACATGTTGAAGAATGATGGTAT
FY437357       --> CAGGGATCTGCAGCCAGTGTGACCAAGAACATGTTGAAGAATGATGGTAT
FY453684       --> CAGGGATCTGCAGCCAGTGTGACCAAGAACATGTTGAAGAATGATGGTAT
FD548548       --> ..................................................
FD560670       --> ..................................................
FY429770       --> ..................................................
EY930073       --> ..................................................

               301    -    351
UN22990        --> TGGTGCTTTCTACAAGGGATTGTCTGCTGGTTTGCTGAGGCAAGCAACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766980       <-- ..................................................
EY927786       <-- ..................................................
FD565036       <-- ..................................................
FD579777       --> TGGTGCTTTCTACAAGGGATTGTCTGCTGGTTTGTTGAGGCAAGCAACTT
EY931950       --> TGGTGCTTTCTACAAGGGATTGTCTGCTG-TTTGCTGAGGCAAGCAACTT
HS107008       --> TGGTGCTTTCTACAAGGGATTGTCTGCTGGTTTGCTGAGGCAAGCAACTT
EX762788       --> TGGTGCTTTCTACAAGGGATTGTCTGCTGGTTTGTTGAGGCAAGCAACTT
FY445538       --> TGGTGCTTTCTACAAGGGATTGTCTGCTGGTTTGCTGAGGCAAGCAACTT
FY437265       --> TGGTGCTTTCTACAAGGGATTGTCTGCTGGTTTGCTGAGGCAAGCAACTT
FY437357       --> TGGTGCTTTCTACAAGGGATTGTCTGCTGGTTTGCTGAGGCAAGCAACTT
FY453684       --> TGGTGCTTTCTACAAGGGATTGTCTGCTGGTTTGCTGAGGCAAGCAACTT
FD548548       --> ..................................................
FD560670       --> ..................................................
FY429770       --> ..................................................
EY930073       --> ..................................................

               351    -    401
UN22990        --> ACACCACAGCCCGTCTTGGATCCTTCAAGATGCTGACTGCGAAAGCGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766980       <-- ..................................................
EY927786       <-- ..................................................
FD565036       <-- ..................................................
FD579777       --> ACACCACAGCCCGTCTTGGATCCTTCAAGATGCTGACTGCGAAAGCGATT
EY931950       --> ACACCACAGCCCGTCTTGGATCCTTCAAGATGCTGACTGCGAAAGCGATT
HS107008       --> ACACCACAGCCCGTCTTGGATCCTTCAAGATGCTGACTGCGAAAGCGATT
EX762788       --> ACACCACAGCCCGTCTTGGATCTTTCAAGATGCTGACTGCAAAAGCGATT
FY445538       --> ACACCACAGCCCGTCTTGGATCCTTCAAGATGCTGACTGCGAAAGCGATT
FY437265       --> ACACCACAGCCCGTCTTGGATCCTTCAAGATGCTGACTGCGAAAGCGATT
FY437357       --> ACACCACAGCCCGTCTTGGATCCTTCAAGATGCTGACTGCGAAAGCGATT
FY453684       --> ACACCACAGCCCGTCTTGGATCCTTCAAGATGCTGACTGCGAAAGCGATT
FD548548       --> ..................................................
FD560670       --> ..................................................
FY429770       --> ..................................................
EY930073       --> ..................................................

               401    -    451
UN22990        --> GAAGCTAACGACGGGAAGCCGCTACCTCTGTATCAGAAGGCTCTGTGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766980       <-- ..................................................
EY927786       <-- ..................................................
FD565036       <-- ..................................................
FD579777       --> GAAGCTAACGACGGAAAGCCGCTACCTCTGTATCAGAAGGCTCTGTGTGG
EY931950       --> GAAGCTAACGACGGGAAGCCGCTACCCCAGTATCAGAAGGCTCTGTGTGG
HS107008       --> GAAGCTAACGACGGGAAGCCGCTACCTCTGTATCAGAAGGCTCTGTGTGG
EX762788       --> GAGGCTAACGATGGGAAGCCGCTACCTCTGTATCAGAAGGCTCTCTGTGG
FY445538       --> GAAGCTAACGACGGGAAGCCGCTACCTCTGTATCAGAAGGCTCTGTGTGG
FY437265       --> GAAGCTAACGACGGGAAGCCGCTACCTCTGTATCAGAAGGCTCTGTGTGG
FY437357       --> GAAGCTAACGACGGGAAGCCGCTACCTCTGTATCAGAAGGCTCTGTGTGG
FY453684       --> GAAGCTAACGACGGGAAGCCGCTACCTCTGTATCAGAAGGCTCTGTGTGG
FD548548       --> ..................................................
FD560670       --> ..................................................
FY429770       --> ..................................................
EY930073       --> ..................................................

               451    -    501
UN22990        --> TCTGACGGCCGGTGCTATTGGTGCTTGCGTCGGTAGTCCGGCCGATCTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766980       <-- ..............................................tTGG
EY927786       <-- ..................................................
FD565036       <-- ..................................................
FD579777       --> TCTGACGGCCGGTGCCATTGGTGCTTGCGTCGGTAGTCCGGCCGATCTGG
EY931950       --> TCTGACGGCCGGTGCCATTGGTGCTTGCGTCGGTAGTCCGGCCGATCTGG
HS107008       --> TCTGACGGCCGGTGCCATTGGTGCTTGCGTCGGTAGTCCGGCCGATCTGG
EX762788       --> TCTGACGGCCGGTGCCATTGGTGCTTGCGTCGGTAGTCCGGCCGATTTGG
FY445538       --> TCTGACGGCCGGTGCTATTGGTGCTTGCGTCGGTAGTCCGGCCGATCTGG
FY437265       --> TCTGACGGCCGGTGCTATTGGTGCTTGCGTCGGTAGTCCGGCCGATCTGG
FY437357       --> TCTGACGGCCGGTGCTATTGGTGCTTGCGTCGGTAGTCCGGCCGATCTGG
FY453684       --> TCTGACGGCCGGTGCTATTGGTGCTTGCGTCGGTAGTCCGGCCGATCTGG
FD548548       --> ..................................................
FD560670       --> ..................................................
FY429770       --> ..................................................
EY930073       --> ..................................................

               501    -    551
UN22990        --> CGCTTATCAGAATGCAAGCCGACAACACCTTGCCGTTAGCTCAGCGCAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766980       <-- CGCTTATCAGAATGCAAGC-GACAACACCTTGCCGTTAGCTCAGCGCAGG
EY927786       <-- CGCTTATCAGAATGCAAGCCGACAACACCTTGCCGTTAGCTCAGCGCAGG
FD565036       <-- ..................................................
FD579777       --> CGCTTATCAGAATGCAAGCCGACAACACCTTGCCGTTAGCTCAGCGCAGG
EY931950       --> CGCTTATCAGAATGCAAGCCGACAACACCTTGCCGTTAGCTCAGCGCAGG
HS107008       --> CGCTTATCAGAATGCAAGCCGACAACACCTTGCCGTTAGCTCAGCGCAGG
EX762788       --> CGCTTATCAGAATGCAAGCCGACAACACCTTGCCGTTAGCTCAGCGCAGG
FY445538       --> CGCTTATCAGAATGCAAGCCGACAACACCTTGCCGTTAGCTCAGCGCAGG
FY437265       --> CGCTTATCAGAATGCAAGCCGACAACACCTTGCCGTTAGCTCAGCGCAGG
FY437357       --> CGCTTATCAGAATGCAAGCCGACAACACCTTGCCGTTAGCTCAGCGCAGG
FY453684       --> CGCTTATCAGAATGCAAGCCGACAACACCTTGCCGTTAGCTCAGCGCAGG
FD548548       --> ...............................................gGG
FD560670       --> ..................................................
FY429770       --> ..................................................
EY930073       --> ..................................................

               551    -    601
UN22990        --> AACTACACCAACGCCTTCCACGCGCTGTACCGTATCAGCGCCGATGAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766980       <-- AACTACACCAACGCCTTCCACGCGCTGTACCGTATCAGCGCCGACGAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY927786       <-- AACTACACCAACGCCTTCCACGCGCTGTACCGTATCAGCGCCGATGAAGG  Raphanus sativus var. oleiformis
FD565036       <-- ..................................................  Raphanus sativus var. oleiformis
FD579777       --> AACTACACCAATGCCTTCCACGCGCTGTACCGTATCAGCGCCGACGAAGG  Raphanus sativus cv Rat-Tail Radish #3870
EY931950       --> AACTACACCAACGCCTTCCACGCGCTGTACCGTATCAGCGCCGATGAAGG  Raphanus sativus var. oleiformis
HS107008       --> AACTACACCAACGCCTTCCACGCGCTGTACCGTATCAGCGCCGATGAAGG  Raphanus sativus var. niger
EX762788       --> AACTACACCAACGCCTTCCACGCGCTGTACCGTATCAGCGCCGACGAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY445538       --> AACTACACCAACGCCTTCCACGCGCTGTACCGTATCAGCGCCGATGAAGG  Raphanus sativus cv GSK3-1
FY437265       --> AACTACACCAACGCCTTCCACGCGCTGTACCGTATCAGCGCCGATGAAGG  Raphanus sativus cv GSK3-1
FY437357       --> AACTACACCAACGCCTTCCACGCGCTGTACCGTATCAGCGCCGATGAAGG  Raphanus sativus cv GSK3-1
FY453684       --> AACTACACCAACGCCTTCCACGCGCTGTACCGTATCAGCGCCGATGAAGG  Raphanus sativus cv GSK3-1
FD548548       --> AACTACACCAACGCCTTCCACGCGCTGTACCGTATCAGCGCCGACGAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD560670       --> ..................................................  Raphanus sativus var. oleiformis
FY429770       --> ..................................................  Raphanus sativus cv GSK3-1
EY930073       --> ..................................................  Raphanus sativus var. oleiformis

               601    -    651
UN22990        --> AGTTTTGGCGCTCTGGAAAGGTTGTGGTCCCACCGTGGTCAGAGCCATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766980       <-- AGTTTTGGCGCTCTGGAAAGGTTGTGGTCCCACTGTGGTCAGAGCTATGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY927786       <-- AGTTTTGGCGCTCTGGAAAGGTTGTGGTCCCACCGTGGTCAGAGCCATGG  Raphanus sativus var. oleiformis
FD565036       <-- ..................................................  Raphanus sativus var. oleiformis
FD579777       --> AGTTTTGGCGCTCTGGAAAGGTTGTGGTCCCACTGTGGTCAGAACCATGG  Raphanus sativus cv Rat-Tail Radish #3870
EY931950       --> AGTTTTGGCGCTCTGGAAAGGTTGTGGTCCCACCGTGGTCAGAGCCATGG  Raphanus sativus var. oleiformis
HS107008       --> AGTTTTGGCGCTCTGGAAAGGTTGTGGTCCCACCGTGGTCAGAGCCATGG  Raphanus sativus var. niger
EX762788       --> AGTTTTGGCGCTCTGGAAAGGTTGTGGTCCCACTGTGGTCAGAGCTATGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY445538       --> AGTTTTGGCGCTCTGGAAAGGTTGTGGTCCCACCGTGGTCAGAGCCATGG  Raphanus sativus cv GSK3-1
FY437265       --> AGTTTTGGCGCTCTGGAAAGGTTGTGGTCCCACCGTGGTCAGAGCCATGG  Raphanus sativus cv GSK3-1
FY437357       --> AGTTTTGGCGCTCTGGAAAGGTTGTGGTCCCACCGTGGTCAGAGCCATGG  Raphanus sativus cv GSK3-1
FY453684       --> AGTTTTGGCGCTCTGGAAAGGTTGTGGTCCCACCGTGGTCAGAGCCATGG  Raphanus sativus cv GSK3-1
FD548548       --> AGTTTTGGCGCTCTGGAAAGGTTGTGGTCCCACTGTGGTCAGAGCTATGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD560670       --> ..................................................  Raphanus sativus var. oleiformis
FY429770       --> ..................................................  Raphanus sativus cv GSK3-1
EY930073       --> ..................................................  Raphanus sativus var. oleiformis

               651    -    701
UN22990        --> CTTTGAACATGGGGATGCTTGCTTCTTATGATCAGAGTGCTGAGTACATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766980       <-- CTTTGAACATGGGTATGCTTGCTTCTTACGATCAGAGTGCTGAGTACATG
EY927786       <-- CTTTGAACATGGGGATGCTTGCTTCTTATGATCAGAGTGCTGAGTACATG
FD565036       <-- .............................GATCAGAGTGCTGAGTACATG
FD579777       --> CTTTGAACATGGGGATGCTTGCTTCTTATGATCAGAGTGCTGAGTACATG
EY931950       --> CTTTGAACATGGGGATGCTTGCTTCTTATGATCAGAGTGCTGAGTACATG
HS107008       --> CTTTGAACATGGGGATGCTTGCTTCTTATGATCAGAGTGCTGAGTACATG
EX762788       --> CTTTGAACATGGGTATGCTTGCTTCTTACGATCAGAGTGCTGAGTACATG
FY445538       --> CTTTGAACATGGGGATGCTTGCTTCTTATGATCAGAGTGCTGAGTACATG
FY437265       --> CTTTGAACATGGGGATGCTTGCTTCTTATGATCAGAGTGCTGAGTACATG
FY437357       --> CTTTGAACATGGGGATGCTTGCTTCTTATGATCAGAGTGCTGAGTACATG
FY453684       --> CTTTGAACATGGGGATGCTTGCTTCTTATGATCAGAGTGCTGAGTACATG
FD548548       --> CTTTGAACATGGGTATGCTTGCTTCTTACGATCAGAGTGCTGAGTACATG
FD560670       --> .............................GATCAGAGTGCTGAGTACATG
FY429770       --> ..................................................
EY930073       --> ..................................................

               701    -    751
UN22990        --> AGAGATAATCTCGGTCTTGGGG-AGACTTCTACCGTCGTTGGAGCAAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766980       <-- AGAGATAATCTCGGTCTTGGGG-AGACTTCTACCGTCGTTGGAGCAAGTG
EY927786       <-- AGAGATAGTCTCGGTCTTGGGG-AGACTTCTACCGTCGTTGGAGCAAGTG
FD565036       <-- AGAGATAATTTCGGTCTTGGGG-AGACTTCTACCGTCGTTGGAGCAAGTG
FD579777       --> AGAGATAATCTCGGTCTTGGGGGAGACTTCTACCGTCGTCGGAGCAAGTG
EY931950       --> AGAGATAGTCTCGGTCTTGG..............................
HS107008       --> AGAGATAATCTCGGTCTTGGGG-AGACTTCTACCGTCGTTGGAGCAAGT.
EX762788       --> AGAGATAATCTCGGTCTTGGGG-AGACTTCTACCGTCGTTGGAGCA-GTG
FY445538       --> AGAGATAATCTCGGTCTTGGGG-AGACTTCTACCGTCGTTGGAGCAAGTG
FY437265       --> AGAGATAATCTCGGTCTTGGGG-AGACTTCTACCGTCGTTGGAGCAAGTG
FY437357       --> AGAGATAATCTCGGTCTTGGGG-AGACTTCTACCGTCGTTGGAGCAAGTG
FY453684       --> AGAGATAATCTCGGTCTTGGGG-AGACTTCTACCGTCGTTGGAGCAAGTG
FD548548       --> AGAGATAATCTCGGTCTTGGGG-AGACTTCTACCGTCGTTGGAGCAAGTG
FD560670       --> AGAGATAATCTCGGTCTTGGGG-AGACTTCTACCGTCGTTGGAGCAAGTG
FY429770       --> .............................................cAGTG
EY930073       --> ..................................................

               751    -    801
UN22990        --> CTGTTTCGGGGTTCTGCGCTGCGGCTTGCAGTCTACCATTTGACTTTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766980       <-- CTGTTTCGGGGTTCTGCGCTGCGGCTTGCAGTCTACCATTTGACTTTGTC
EY927786       <-- CCGTTTCGGGGTTTTGCGCTGCGGCCTGCAGTTTACCATTTGACTTTGTC
FD565036       <-- CCGTTTCGGGGTTTTGCGCTGCGGCTTGCAGTTTACCATTTTACTTTGTC
FD579777       --> CTGTTTCGGGGTTCTGCGCTGCGGCTTG......................
EY931950       --> ..................................................
HS107008       --> ..................................................
EX762788       --> CTGT..............................................
FY445538       --> CTGTTTCGGGGTTCTGCGCTGCGGCTTGCAGTCTACCATTTGACTTTGTC
FY437265       --> CTGTTTCGGGGTTCTGCGCTGCGGCTTGCAGTCTACCATTTGACTTTGTC
FY437357       --> CTGTTTCGGGGTTCTGCGCTGCGGCTTGCAGTCTACCATTTGACTTTGTC
FY453684       --> CTGTTTCGGGGTTCTGCGCTGCGGCTTGCAGTCTACCATTTGACTTTGTC
FD548548       --> CTGTTTCGGGGTTCTGCGCTGCGGCTTGCAGTCTACCATTTGACTTTGTC
FD560670       --> CCGTTTCGGGGTTCTGCGCTGCGGCTTGCAGTCTACCATTTTACTTTGTC
FY429770       --> CTGTTTCGGGGTTCTGCGCTGCGGCTTGCAGTCTACCATTTGACTTTGTC
EY930073       --> ..................................................

               801    -    851
UN22990        --> AAAACTCAGATCCAGAAAATGCAACCGGACGCTCAGGGGAAGTATCCATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766980       <-- AAAACACAGATCCAGAAAATGCAACCGGACGCTCAGGGGAAGTATCCATA
EY927786       <-- AAAACTCAGATCCAGAAAATGCAACCGGACGCTCAGGGGAAGTATCCATA
FD565036       <-- AAAACTCAGATCCAGAAAATGCAACCTGACGCTCAGGGGAAGTATCCATA
FD579777       --> ..................................................
EY931950       --> ..................................................
HS107008       --> ..................................................
EX762788       --> ..................................................
FY445538       --> AAAACTCAGATCCAGAAAATGCAACCGGACGCTCAGGGGAAGTATCCATA
FY437265       --> AAAACTCAGATCCAGAAAATGCAACCGGACGCTCAGGGGAAGTATCCATA
FY437357       --> AAAACTCAGATCCAGAAAATGCAACCGGACGCTCAGGGGAAGTATCCATA
FY453684       --> AAAACTCAGATCCAGAAAATGCAACCGGACGCTCAGGGGAAGTATCCATA
FD548548       --> AAAACACAGATCCAGAAAATGCAACCGGACGCTCAGGGGAAGTATCCATA
FD560670       --> AAAACTCAGATCCAGAAAATGCAACCTGACGCTCAGGGGAAGTATCCATA
FY429770       --> AAAACTCAGATCCAGAAAATGCAACCGGACGCTCAGGGGAAGTATCCATA
EY930073       --> ..................................................

               851    -    901
UN22990        --> CACTGGTTCGCTTGACTGTGCAATGCAAACCTTGAAGTCAGGAGGACCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766980       <-- CACGGGTTCGCTCGACTGTGCAATGCAAACCTTGAAGTCGGGAGGACCTC
EY927786       <-- CACTGGTTCGCTTGACTGTGCAATGCAAACCTTGAAGTCAGGAGGACCTT
FD565036       <-- CACTGGTTCGCTTGACTGTGCAATGCAAACCTTGAAGTCAGGAGGACCTT
FD579777       --> ..................................................
EY931950       --> ..................................................
HS107008       --> ..................................................
EX762788       --> ..................................................
FY445538       --> CACTGGTTCGCTTGACTGTGCAATGCAAACCTTGAAGTCA..........
FY437265       --> CACTGGTTCGCTTGACT.................................
FY437357       --> CACTGGTTCGCTTGACTGTGCAATG.........................
FY453684       --> CACTGGTTCGCTTGACTGTGCAATGCAAACCTTG................
FD548548       --> CACGGGTTCGCTCGACTGTGCAATGCAAACCTTGAAGTCGGGAGGACCTC
FD560670       --> CACTGGTTCGCTTGACTGTGCAATGCAAACCTTGAAGTCAGGAGGACCTC
FY429770       --> CACTGGTTCGCTTGACTGTGCAATGCAAACCTTGAAGTCAGGAGGACCTC
EY930073       --> ..................................................

               901    -    951
UN22990        --> TGAAGTTCTACACAGGTTTCCCTGTTTACTGCGTCAGGATCGCCCCTCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766980       <-- TGAAATTCTACACAGGTTTCCCTGTTTACTGCGTCAGGATCGCCCCTCAC
EY927786       <-- TGAAGTTCTACACAGGTTTCCCTGTTTACTGCGTCAGGATCGCCCCTCAC
FD565036       <-- TGAAGTTTTACACAGGTTTCCCTGTTTACTGCGTCAGGATCGCCCCTCAC
FD579777       --> ..................................................
EY931950       --> ..................................................
HS107008       --> ..................................................
EX762788       --> ..................................................
FY445538       --> ..................................................
FY437265       --> ..................................................
FY437357       --> ..................................................
FY453684       --> ..................................................
FD548548       --> TGAAATTCTACACAGGTTTCCCTGTTTACTGCGTCAGGATCGCCCCTCAC
FD560670       --> TGAAGTTCTACACAGGTTTCCCTGTTTACTGCGTCAGGATCGCCCCTCAC
FY429770       --> TGAAGTTCTACACAGGTTTCCCTGTTTACTGCGTCAGGATCGCCCCTCAC
EY930073       --> ..................................................

               951    -   1001
UN22990        --> GTCATGATGACATGGATCTTCCTGAACCAGATTACAAAGTTTCAGAAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766980       <-- GTCATGATGACATGGATCTTCCTGAACCAGATTACAAAGTTTCAGAAGAC
EY927786       <-- GTCATGATGACATGGATCTTCCTGAACCAGATTACAAAGTTTCAGAAGAC
FD565036       <-- GTCATGATGACATGGATTTTCCTGAACCAGATTACAAAGTTTCAGAAGAC
FD579777       --> ..................................................
EY931950       --> ..................................................
HS107008       --> ..................................................
EX762788       --> ..................................................
FY445538       --> ..................................................
FY437265       --> ..................................................
FY437357       --> ..................................................
FY453684       --> ..................................................
FD548548       --> GTCATGATGACATGGATCTTCCTGAACCAGATTACAAAGCTTCAGAAGAC
FD560670       --> GTCATGATGACATGGATCTTCCTGAACCAGATTACAAAGTTTCAGAAGAC
FY429770       --> GTCATGATGACATGGATCTTCCTGAACCAGATTACAAAGTTTCAGAAGAC
EY930073       --> ................................................gg

               1001   -   1051
UN22990        --> CATTGGTCTGTGAGATTCAAGCATTGTGAAGTGCGTGGCGAGAATAAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766980       <-- CATTGGTCTGTGAGATTCAAGCATTGTGAAGTGCGTGGCGAGAATAAGAT
EY927786       <-- CATTGGTCTGTGAGATTCAAGCATTGTGAAGTGCGTGGCGAGAATAAGAT
FD565036       <-- CATTGGTTTGCGAGATTCAAGCATTGTGAAGTGCGTGGCGAGAATAAGAT
FD579777       --> ..................................................
EY931950       --> ..................................................
HS107008       --> ..................................................
EX762788       --> ..................................................
FY445538       --> ..................................................
FY437265       --> ..................................................
FY437357       --> ..................................................
FY453684       --> ..................................................
FD548548       --> CATTGGTCTGTGAGATTCAAGCATTGTGAAGTGCGTGGCGAGAATAAGAT
FD560670       --> CATTGGTCTGCGAGATTCAAGCATTGTGAAGTGCGTGGCGAGAATAAGAT
FY429770       --> CATTGGTCTGTGAGATTCAAGCATTGTGAAGTGCATGCCGAGAATAAGAT
EY930073       --> CATTGGTCTGTGAGATTCAAGCATTGTGAAGTGCGTGGCGAGAATAAGAT

               1051   -   1101
UN22990        --> GAGAAGAAAAACACAATTGGAATTGTGTTAGATTTGCCTTTTTTTTATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766980       <-- GAGAAGAAAAACACAATTGGAATTGTGTTAGATTTGCCTTTTT--TATTC
EY927786       <-- GAGAAGAAAAACACAATTGGAATTGTGTTAGATTTGTTTTTTTTTTATTC
FD565036       <-- GAGAAGAAAAACACAATTGGAATTGTGTTAGATTTGCCTTTTTTTTATTC
FD579777       --> ..................................................
EY931950       --> ..................................................
HS107008       --> ..................................................
EX762788       --> ..................................................
FY445538       --> ..................................................
FY437265       --> ..................................................
FY437357       --> ..................................................
FY453684       --> ..................................................
FD548548       --> GAGAAGAAAAACACAATTGGAATTGTGTTAGATTTGCCTTTTTT--ATTC
FD560670       --> GAGAAGAAAAACACAATTGGAATTGTGTTAGATTTGCCTTTTTTTTATTC
FY429770       --> GAGAAGAGAAACACAATTGGAATTGTGTTAGATTTGCTTTTTTATTCAT-
EY930073       --> GAGAAGAAAAACACAATTGGAATTGTGTTAGATTTGCCTTTTTTTTATTC

               1101   -   1151
UN22990        --> ATATACATGATGATCACATT-GCCTTGACGCATTATTGGAAACTGTTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766980       <-- ATATACATGATGATCACATTTACCTTGACGCATTATTGGAAACTGTTGAA
EY927786       <-- ATATACATGATGATCACATT-GCCTTGACGCATTATTGGAAACTGTTGAA
FD565036       <-- ATATACATGATGATCACATT-GCCTTGACGCATTATTGGAAACTGTTGAA
FD579777       --> ..................................................
EY931950       --> ..................................................
HS107008       --> ..................................................
EX762788       --> ..................................................
FY445538       --> ..................................................
FY437265       --> ..................................................
FY437357       --> ..................................................
FY453684       --> ..................................................
FD548548       --> ATATACATGATGATCACATTTACCTCGACGCATTATTGGAAACTGT....
FD560670       --> ATATACATGATGATCACATT-GCCTTGACGCATTATTGGAAACTGTTGAA
FY429770       --> ATATACATGATGATCACATT-GCCTGGACGCATTATTGGAA-CTGTTGAA
EY930073       --> ATATACATGATGATCACATT-GCCTTGACGCATTATTGGAAACTGTTGAA

               1151   -   1201
UN22990        --> GACTT-AATATTTTTGTTGTTGTTGAGGATCGTTGATTGGTCTGGTAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766980       <-- GACTTTAATATTTTTGTTGTTGTTGAGGATCGTTGATTGGTCTGGTAAAC
EY927786       <-- GACTT-AATATTTTTGTTGTTGTTGAGGATCGTTGATTGGTCTGGTAAAC
FD565036       <-- GACTT-AATATTTTTGTTGTTGTTGAGGATCGTTGATTGGTTTGGTAAAC
FD579777       --> ..................................................
EY931950       --> ..................................................
HS107008       --> ..................................................
EX762788       --> ..................................................
FY445538       --> ..................................................
FY437265       --> ..................................................
FY437357       --> ..................................................
FY453684       --> ..................................................
FD548548       --> ..................................................
FD560670       --> GACTT-AATATTTTTGTTGTTGTTGAGGATCGTTGATTGGTCTGGTAAAC
FY429770       --> GACTTTAATATTTTTGTTGTTGTCGAGGATCGTTGATTGGTTTGGTAAAC
EY930073       --> GACTT-AATATTTTTGTTGTTGTTGAGGATCGTTGATTGGTCTGGTAAAC

               1201   -   1251
UN22990        --> TTCCTTTTGAAATTTAAAAAGAAACACAATTCTGAGATCTTAATTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766980       <-- TTCCTTTTGAAATTTAAAA-GAAACACAATTCTGAGATCc.......
EY927786       <-- TTCCTTTTGAAATTTAAAAAGAAACACAATTttgg............
FD565036       <-- TTCCTTTTGAAATTTAAAAAGAAACACAATTTTGAGATTTTAATTAG
FD579777       --> ...............................................
EY931950       --> ...............................................
HS107008       --> ...............................................
EX762788       --> ...............................................
FY445538       --> ...............................................
FY437265       --> ...............................................
FY437357       --> ...............................................
FY453684       --> ...............................................
FD548548       --> ...............................................
FD560670       --> TTCCTTTTGAAATTTAAAAAGAAACACAATTCTGAGATCTTAATTAG
FY429770       --> TTCCTTTTGAAATTTAAAgtcaccaacgc..................
EY930073       --> TTCCTTTTGAAATTTAAAAAGAAACACAATTCTGAG...........