Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN22999

               1      -     51
UN22999        --> TCGTAATTGGCGAGTTCTTTTCAATATGTAAACTACACAAGAAAAAGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577797       <-- ..................................................
EW718199       <-- ..................................................
EX758151       <-- ..................................................
FD949343       <-- ..................................................
FD963725       <-- ..................................................
FD534486       <-- ..................................................
EW721879       --> TCGTAATTGGCGAGTTCTTTTCAATATGTAAACTACACAAGAAAAAGAGC
FY439013       --> ..................................................
FD530410       --> ..................................................
FD945000       --> ..................................................
FD582045       --> ..................................................
FD959945       --> ..................................................

               51     -    101
UN22999        --> TGCACAAACATGAAGAGAAAACCACAGGCAAAGAGAGACAGCAAGGACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577797       <-- ..................................................
EW718199       <-- ..................................................
EX758151       <-- ..................................................
FD949343       <-- ..................................................
FD963725       <-- ..................................................
FD534486       <-- ..................................................
EW721879       --> TGCACAAACATGAAGAGAAAACCACAGGCAAAGAGAGACAGCAAGGACAA
FY439013       --> ..................................................
FD530410       --> ..................................................
FD945000       --> ..................................................
FD582045       --> ..................................................
FD959945       --> ..................................................

               101    -    151
UN22999        --> CATCAAAATTGTTCAAAATATTCTCCATATAAACCCTTTAGCGTTTCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577797       <-- ..................................................
EW718199       <-- ..................................................
EX758151       <-- ..................................................
FD949343       <-- ..................................................
FD963725       <-- ..................................................
FD534486       <-- ..................................................
EW721879       --> CATCAAAATTGTTCAAAATATTCTCCATATAAACCCTTTAGCGTTTCATC
FY439013       --> ..........GTTCAAA-TATTCTCCATATAAACCCTTTAGCGTTTCATC
FD530410       --> .............CAAAATATTCTCCATATAAACCCTTTAGCGTTTCATC
FD945000       --> .............CAAAATATTCTCCATATAAACCCTTTAGCGTTTCATC
FD582045       --> ........................CCATATAAACCCTTTAGCGTTTCATC
FD959945       --> ..................................................

               151    -    201
UN22999        --> AGTTTCTTGTCTTACATTATGGAACATGAGTTTGGATTCTCGTCGCTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577797       <-- ..................................................
EW718199       <-- ..................................................
EX758151       <-- ..................................................
FD949343       <-- ..................................................
FD963725       <-- ..................................................
FD534486       <-- ..................................................
EW721879       --> AGTTTCTTGTCTTACATTATGGAACATGAGTTTGGATTCTCGTCGCTGAA
FY439013       --> AGTTTCTTGTCTTACATTATGGAACATGAGTTTGGATTCTCGTCGCTGAA
FD530410       --> AGTTTCTTGTCTTACATTATGGAACATGAGTTTGGATTCTCGTCGCTGAA
FD945000       --> AGTTTCTTGTCTTACATTATGGAACATGAGTTTGGATTCTCGTCGCTGAA
FD582045       --> AGTTTCTTGTCTTACATTATGGAACATGAGTTTGGATTCTCGTCGCTGAA
FD959945       --> ..................................................

               201    -    251
UN22999        --> CAGTTGAGGCGGGTAAGCATGAGGCGGCATTTCCATAGGCGGAACCGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577797       <-- ..................................................
EW718199       <-- ..................................................
EX758151       <-- ..................................................
FD949343       <-- ..................................................
FD963725       <-- ..................................................
FD534486       <-- ..................................................
EW721879       --> TAGTTGAGGCGGGTAAGCATGAGGCGGCATTTCCATAGGCGGAACCGCTA
FY439013       --> CAGTTGAGGCGGGTAAGCATGAGGCGGCATTTCCATAGGCGGAACCGCCA
FD530410       --> CAGTTGAGGCGGGTAAGCATGAGGCGGCATTTCCATAGGCGGAACCGCCA
FD945000       --> CAGTTGAGGCGGGTAAGCATGAGGCGGCATTTCCATAGGCGGAACCGCCA
FD582045       --> TAGTTGAGGCGGGTAAGCATGAGGCGGCATTTCCATAGGCGGAACCGCCA
FD959945       --> ..................................................

               251    -    301
UN22999        --> CACGCGGTGGTTGGTAATAATAGTAGTAATAAGGATTATCTATCTTCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577797       <-- ..................................................
EW718199       <-- ..................................................
EX758151       <-- ..................................................
FD949343       <-- ..................................................
FD963725       <-- ..................................................
FD534486       <-- ..................................................
EW721879       --> CACGCGGTGGTTGGTAATAATAATAGTAATAAGGATTATCTATCTTCCTC
FY439013       --> CACGCGGTGGTTGGTAATAATAGTAGTAATAAGGATTATCTATCTTCCTC
FD530410       --> CACGCGGTGGTTGGTAATAATAGTAGTAATAAGGATTATCTATCTTCCTC
FD945000       --> CACGCGGTGGTTGGTAATAATAGTAGTAATAAGGATTATCTATCTTCCTC
FD582045       --> CACGCGGTGGTTGGTAATAATAGTAGTAATAAGGATTATCTATCTTCCTC
FD959945       --> ..................................................

               301    -    351
UN22999        --> ACATCCACAACTTTGCCCTCTCCCTCGCCGCTGCCGCCACCGTTTTCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577797       <-- ..................................................
EW718199       <-- ..................................................
EX758151       <-- ..................................................
FD949343       <-- ..................................................
FD963725       <-- ..................................................
FD534486       <-- ..................................................
EW721879       --> ACATCCACAACTTTTCCCTCTTCCTCGCCGCTGCCGCCACCGCTTTCAGC
FY439013       --> ACATCCACAACTTTTTCCTCTCCCTCACCGCTGCCGCCACCGTTTTCAGC
FD530410       --> ACATCCACAACTTTGCCCTCTCCCTCGCCGCTGCCGCCACCGTTTTCAGC
FD945000       --> ACATCCACAACTTTGCCCTCTCCCTCGCCGCTGCCGCCACCGTTTTCAGC
FD582045       --> ACATCCACAACTTTTGCCTCTTCCTCGCCGCTGCCACCACCGTTTTCAGC
FD959945       --> ..................................................

               351    -    401
UN22999        --> TGCTTTGCCTTCCCCTTTGTCACCATCCCCTTCTTTCTTTTCTTCCTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577797       <-- ..................................................
EW718199       <-- ..................................................
EX758151       <-- ..................................................
FD949343       <-- ..................................................
FD963725       <-- ..................................................
FD534486       <-- ..................................................
EW721879       --> TGCTTTGCCTTCCCCTTTGTCGCCATCCCCTTCTTTCTTGTCTTCCTTCT
FY439013       --> TGCTTTGCCTTCCCCTTTGTCACCATCCCCTTCTTTCTTTTCTTCCTTCT
FD530410       --> TGCTTTTCCTTCCCCTTTGTCACCATCCCCTTCTTTCTTTTCTTCCTTCT
FD945000       --> TGCTTTTCCTTCCCCTTTGTCACCATCCCCTTCTTTCTTTTCTTCCTTCT
FD582045       --> TGCTTTGCCTTCCCCTTTGTCACCATCCCCTTCTTTCTTTTCTTCCTTCT
FD959945       --> ..................................................

               401    -    451
UN22999        --> CTTTGGACTCTCCTCCGCCATTGTCCCCTTTTCCTTCTTCTTTCTTCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577797       <-- .........................................tttTTCTCT
EW718199       <-- ..................................................
EX758151       <-- ..................................................
FD949343       <-- ..................................................
FD963725       <-- ..................................................
FD534486       <-- ..................................................
EW721879       --> CTTTGGACTCTCCTCCGCCATTGTCCCCTTTTCCTTCTTCTTTCTTCTCT
FY439013       --> CTTTGGACTCTCCTCCGCCATTGTCCCCTTTTCCTTCTTCTTTCTTCTCT
FD530410       --> CTTTGGACTCTCCTCCACCATTGTCCCCTTTTCCTTCTTCTTTCTTCTCT
FD945000       --> CTTTGGACTCTCCTCCACCATTGTCCCCTTTTCCTTCTTCTTTCTTCTCT
FD582045       --> CTTTGGACTCTCCTCCGCCATTGTCCCCTTTTCCTTCTTCTTTCTTCTCT
FD959945       --> ....GGACTCTCCTCCACCATTGTCCCCTTTTCCTTCTTCTTTCTTCTCT

               451    -    501
UN22999        --> GCTTCAGCCGCCGCAGCTGCTTCCTCAGGTGGCGGTGGAGGTGGTGGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577797       <-- GCT-CAGCCGC-GCAGCTGCTTC-TCAG-TG-CG-TG-AG-TG-TGG-TC
EW718199       <-- ..................................................
EX758151       <-- ..................................................
FD949343       <-- ..................................................
FD963725       <-- ..................................................
FD534486       <-- ..................................................
EW721879       --> GCTTCAGCCGCCGCAGCTGCTTCCTCAGGTGGCGGTGGAGGTGGTGGGTC
FY439013       --> GCTTCAGCCGCCGCAGCTGCTTCCTCAGGTGGCGGTGGAGGTGGTGGGTC
FD530410       --> GCTTCAGCCGCCGCAGCTGCTTCCTCAGGTGGCGGTGGAGGTGGTGGGTC
FD945000       --> GCTTCAGCCGCCGCAGCTGCTTCCTCAGGTGGCGGTGGAGGTGGTGGGTC
FD582045       --> GCTTCAGCCGCCGCAGCTGCTTCCTCAGGTGGCGGTGGAGGTGGTGGGTC
FD959945       --> GCTTCAGCCGCCGCAGCTGCTTCCTCAGGTGGCGGTGGAGGTGGTGGGTC

               501    -    551
UN22999        --> AATTTTCATAATGGCAGCATGTTTTCCAGTCCGTTTATAAATGTGTTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577797       <-- AATTT-CATAATGGCAGCATGTTTTCCAGTCCGTTTATAAATGTGTTCAA
EW718199       <-- ....................................ATAAATGTGT-CAA
EX758151       <-- ..................................................
FD949343       <-- ..................................................
FD963725       <-- ..................................................
FD534486       <-- ..................................................
EW721879       --> AATTTTCATAATGGCAGCATGTTTTCCAGTCCGTTTATAAATGTGTTCAA
FY439013       --> AATTTTCATAATGGCAGCATGTTTTCCAGTCCGTTTATAAATGTGTTCAA
FD530410       --> AATTTTCATAATGGCAGCATGTTTTCCAGTCCGTTTATAAATGTGTTCAA
FD945000       --> AATTTTCATAATGGCAGCATGTTTTCCAGTCCGTTTATAAATGTGTTCAA
FD582045       --> AATTTTCATAATGGCAGCATGTTTTCCAGTCCGTTTATAAATGTGTTCAA
FD959945       --> AATTTTCATAATGGCAGCATGTTTTCCAGTCCGTTTATAAATGTGTTCAA

               551    -    601
UN22999        --> CGAGCTTTTGCGGTTCAAACACTCCTTTCACTGTCACTTGAGAACCCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577797       <-- CGAGCTTT-GCGGTCCAAACACTCCTTTCACTGTCACTTGAGAACCCTTT  Raphanus sativus cv Rat-Tail Radish #3870
EW718199       <-- CGAGCTTT-GCGGT-CAAACAC-CCTTTCACTGTCACTTGAGA-CCCTT-  Raphanus sativus var. oleiformis
EX758151       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD949343       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD963725       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD534486       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW721879       --> CGAGCTTTTGCGGTTCAAACACTCCTTTCACTGTCACTTGAGAACCCTT-  Raphanus sativus var. oleiformis
FY439013       --> CGAGCTTTTGCGGTTCAAACACTCCTTTCACTGTCACTTGAGAACCCTTT  Raphanus sativus cv GSK3-1
FD530410       --> CGAGCTTTTGCGGTTCAAACACTCCTTTCACCGTCACTTGAGAACCCTTT  Raphanus raphanistrum subsp. maritimus
FD945000       --> CGAGCTTTTGCGGTTCAAACACTCCTTTCACCGTCACTTGAGAACCCTTT  Raphanus sativus cv Early Scarlet Globe
FD582045       --> CGAGCTTTTGCGGTCCAAACACTCCTTTCACTGTCACTTGAGAACCCTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD959945       --> CGAGCTTTTGCGGTTCAAACACTCCTTTCACCGTCACTTGAGAACCCTTT  Raphanus raphanistrum subsp. maritimus

               601    -    651
UN22999        --> AAATCGGATTCAGCAGATTCCACTCCTTTCATTCTCATGATCCGTTTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577797       <-- AAATCGGATTCAGCAGATTCCACTCCTTTCATTCTCATGATCCGTTTCTT
EW718199       <-- AAATCGGAT-CAGCAGATTCCACTC-TTTCATTCTCATGATCCGTTTCTT
EX758151       <-- ..................................................
FD949343       <-- ..................................................
FD963725       <-- ..................................................
FD534486       <-- ..................................................
EW721879       --> AAATCGGATTCAGCAGATTCCACTCCTTTCATTCTCATGATCCGTTTCTT
FY439013       --> AAATCGGATTCAGCAGATTCCACTCCTTTCATTCTCATGATCCGTTTCTT
FD530410       --> AAATCGGATTCAGCAGATTCCACTCCTTTCATTCTCATGATCCGTTTCTT
FD945000       --> AAATCGGATTCAGCAGATTCCACTCCTTTCATTCTCATGATCCGTTTCTT
FD582045       --> AAATCGGATTCAGCAGATTCCACTCCTTTCATTCTCATGATCCGTTTCTT
FD959945       --> AAATCGGATTCAGCAAATTCCACTCCTTTCATTCTCATGATCCGTTTCTT

               651    -    701
UN22999        --> GATCTCCGTTGCACAAGCTTCGCAGTGCATGTGAACCTTGAGGACCACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577797       <-- GATCTCCGTTGCACAGGCTTCGCAGTGCATGTGAACCTTGAGGACCACCG
EW718199       <-- GATCTCCGTTGCACAAGCTTCGCAGTGCATGTGAACCTTGAGGACCACCG
EX758151       <-- .......................................GAGGACCACGG
FD949343       <-- ........................................AGGACCACCG
FD963725       <-- ..................................................
FD534486       <-- ..................................................
EW721879       --> GATCTCCGTTGCACAAGCTTCGCAGTGCATGTGAACCTTGAGGACCACCG
FY439013       --> GATCTCCGTTGCACAGGCTTCGCAGTGCATGTGAACCTTGAGGACCACCG
FD530410       --> GATCTCCGTTGCACAAGCTTCACAGTGCATGTGAACCTTGAGGACCACCG
FD945000       --> GATCTCCGTTGCACAAGCTTCGCAGTGCATGTGAACCTTGAGGACCACCG
FD582045       --> GATCTCCGTTGCACAGGCTTCGCAGTGCATGTGAACCTTGAGGACCACCG
FD959945       --> GATCTCCGTTGCACAAGCTTCGCAGTGCATGTGAACCTTGAGGACCACCG

               701    -    751
UN22999        --> TGACCACTACGGGAGGCTCCACTTTCTTCTCTTCCACTTTGGGTTTCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577797       <-- TGACCACTACGGGAGGCTCCACTTTCTTCTCTTCCACTTTGGGTTTCTCC
EW718199       <-- TGGCCACTACGGGAGGCTCCACTTTCTTCTCTTCCACTTTGGGTTTCTCC
EX758151       <-- TGACCACTACAGGAGGCTCCACTTTCTTCTCTTCCACTTTGGGTTTCTCC
FD949343       <-- TGACCACTACGGGAGGCTCCACTTTCTTCTCTTCCACTTTGGGTTTCTCC
FD963725       <-- ............GAGGCTCCACTTTCTTCTCTTCCACTTTGGGTTTCTCC
FD534486       <-- ..................................................
EW721879       --> TGGCCACTACGGGAGGCTCCACTTTCTTCTCTTCCACTTTGGGTTTCTCC
FY439013       --> TGACCACTACGGGAGGCTCCACTTTCTTCTCTTCCACTTTGGGTTTCTCC
FD530410       --> TGACCACTACGGGAGGCTCCACTTTCTTCTCTTCCACTTTGGGTTTCTCC
FD945000       --> TGACCACTACGGGAGGCTCCACTTTCTTCTCTTCCACTTTGGGTTTCTCC
FD582045       --> TGACCACTACGGGAGGCTCCACTTTCTTCTCTTCCACTTTGGGTTTCTCC
FD959945       --> TGACCACTACGGGAGGCTCCACTTTCTTCTCTTCCACTTTGGGTTTCTCC

               751    -    801
UN22999        --> TCCTCTGCTTTCTTCTCC-GGG-G-CTGAGACGGCGGAGGAATTGGAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577797       <-- TCCTCGGCTTTCTTCTCC-GGGAG-CTGAGACGGCGGAGGAATTGGAGAA
EW718199       <-- TCCTCTGCTTTCTTCTCC-GGG-GGCTGAGACGGCGGAGGAATTGGAGAA
EX758151       <-- TCCTCTGCTTTCTTTTCC-GGG-GGCTGAGACGGCGGAGGAATTGGAGAA
FD949343       <-- TCCTCTGCTTTCTTCTCCTGGG-G-CTGAGACGGCGGAGGAATTGGAGAA
FD963725       <-- TCCTCTGCTTTCTTCTCCTGGG-G-CTGAGACGGCGGAGGAATTGGAGAA
FD534486       <-- .....................G-G-CTGAGACGGCGGAGGAATTGGAGAA
EW721879       --> TCCTCTGCTTTCTTCTCC-GGG-G-CTGAGACGc................
FY439013       --> TCCTCGGCTTTCTTCTCC-GGGAG-CTGAGACGGCGGAGGAATTGGAGAA
FD530410       --> TCCTCTGCTTTCTTCTCC................................
FD945000       --> TCCTCTGCTTTCTTCTCCTGGG-G-CTGAGACGGCGG.............
FD582045       --> TCCTCGGCTTTCTTCTCC-GGGAG-CTGAGACGGCG..............
FD959945       --> TCCTCTGCTTTCTTCTCC-TGG-Ggc........................

               801    -    851
UN22999        --> ACAAGCACAACTTGACGGTGGGTCTTTCTTTGAACTCTGGCTAATACTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577797       <-- ACAAGCACAACCTGACGGTGGGTCCTTCTTTGAACTCTGGCTAATACTTT
EW718199       <-- ACAAGCACAACTTGACGGTGGGTCTTTCTTTGAACTCTGGCTAATACTTT
EX758151       <-- ACAAGCACAACTTGACGGTGGGTCTTTCTTTGAAGTCTGGCTAATACTTT
FD949343       <-- ACAAGCACAACTTGACGGTGGGTCTTTCTTTGAACTCTGGCTAATACTTT
FD963725       <-- ACAAGCACAACTTGACGGTGGGTCTTTCTTTGAACTCTGGCTAATACTTT
FD534486       <-- ACAAGCACAACTTGACGGTGGGTCTTTCTTTGAACTCTGGCTAATACTTT
EW721879       --> ..................................................
FY439013       --> ACAAGCACAACTTGACGGTGGGTCTTTCTTTGAACTCTGGCTAATACTTT
FD530410       --> ..................................................
FD945000       --> ..................................................
FD582045       --> ..................................................
FD959945       --> ..................................................

               851    -    901
UN22999        --> CAATGGATCAGCTTTCTCTCCCTTCACCACCACTTTCCCCGTTTTACAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577797       <-- CAACGGATCAGCTTTCTCTCCCTTCACCACCACTTTACCCGTTTTACAAT
EW718199       <-- CAATGGATCAGCTTTCTCTCCCTTCACCACCACTTTCCCCGTTTTACAAT
EX758151       <-- CAATGGATCAGCTTTCTCTCCCTTCACCACCACTTTCCCCGTTTTACAAT
FD949343       <-- CAATGGATCAGCTTTCTCTCCCTTCACCACCACTTTCCCCGTTTTACAAT
FD963725       <-- CAATGGACCAGCTTTCTCTCCCTTCACCACCACTTTCCCCGTTTTACAAT
FD534486       <-- CAATGGATCAGCTTTCTCTACCTTCACCACCACTTTCCCCGTTTTACAAT
EW721879       --> ..................................................
FY439013       --> TAACGGATCAGCTTTCTCTCCCTTCACCACCACTTTCCCCGTTTTACAAT
FD530410       --> ..................................................
FD945000       --> ..................................................
FD582045       --> ..................................................
FD959945       --> ..................................................

               901    -    951
UN22999        --> CAGTCATCACATCTTCCACTCCTTCGAAGCCGTTGAGGCAACGGCGAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577797       <-- CAGTCATCACATCTTCCACTCCTTCGAAGCCGTTGAGGCAACGGCGAACT
EW718199       <-- CAGTCGTCACATCTTCCACTCCTTCGAAGCCGTTGAGGCAACGGCGAACT
EX758151       <-- CAGTCATCACATCTTCCACTCCTTCGAAGCCTTTGAGGCAACGGCGAACT
FD949343       <-- CAGTCATCACATCTTCCACTCCTTCGAAGCCGTTGAGGCAACGGCGAACT
FD963725       <-- CAGTCATCACATCTTCCACTCCTTCGAAGCCGTTGAGGCAACGGCGAACT
FD534486       <-- CAGTCATCACATCTTCCACTCCTTCGAAGCCGTTGAGGCAACGGCGAACT
EW721879       --> ..................................................
FY439013       --> CAGTCATCACATCTTCCACTCCTTC.........................
FD530410       --> ..................................................
FD945000       --> ..................................................
FD582045       --> ..................................................
FD959945       --> ..................................................

               951    -   1001
UN22999        --> TTTCTAGCACAGCCTTCACAATGCATGTAAACTTTAAGGATAATCTCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577797       <-- TTTCTAGCACAGCCTTCACAATGCATGTAAACTTTAAGGATAATATCTTG
EW718199       <-- TTTCTAGCACAGCCTTCACAATGCATGTAAACTTTAAGGATAATCTCTTG
EX758151       <-- TTTCTAGCACAGCCTTCACAATGCATGTAAACTTTAAGGATAATCTCTTG
FD949343       <-- TTTCTAGCACAGCCTTCACAATGCATGTAAACTTTAAGGATAATCTCTTG
FD963725       <-- TTTCTAGCACAGCCTTCACAATGCATGTAAACTTTAAGGATAATCTCTTG
FD534486       <-- TTTCTAGCACAGCCTTCACAATGCATGTAAACTTTAAGGATAATCTCTTG
EW721879       --> ..................................................
FY439013       --> ..................................................
FD530410       --> ..................................................
FD945000       --> ..................................................
FD582045       --> ..................................................
FD959945       --> ..................................................

               1001   -   1051
UN22999        --> CGGCGGAGGAGGGGGTGCTGGAGCCTCAGGCTCCGCCGGAGGTGCATCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577797       <-- CGGCGGAGGAGGGGGTGCTGGAGCCTCAGGCTCCGCCGGAGGTGCATCTT
EW718199       <-- CGGCGGAGGAGGGGGTGCTGGAGCCTCAGGCTCCGCCGGAGGTGCATCTT
EX758151       <-- CGGCGGAGGAGGGGGTGCTGGAGCCTCAGGCTCCGCCGGAGGTGCATCTT
FD949343       <-- CGGCGGAGGAGGGGGTGCTGGAGCCTCAGGCTCCGCCGGAGGTGCATCTT
FD963725       <-- CGGCGGAGGAGGGGGTGCTGGAGCCTCAGGCTCCGCCGGAGGTGCATCTT
FD534486       <-- CGGCGGAGGAGGGGGTGCTGGAGCCTCAGGCTCCGCCGGAGGTGCATCTT
EW721879       --> ..................................................
FY439013       --> ..................................................
FD530410       --> ..................................................
FD945000       --> ..................................................
FD582045       --> ..................................................
FD959945       --> ..................................................

               1051   -   1101
UN22999        --> CTTTGGAATCTTTAGTAGGTTCTCCTTCTTGAGTTTTCTTCTCAGATTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577797       <-- CTTTGGAATCTTTAGTAGGTTCTCCTTCTTGAGTTTTCTTCTCAGATTCT
EW718199       <-- CTTTGGAATCTTTAGTAGGTTCTCCTTCTTGAGTTTTCTTCTCAGATTCT
EX758151       <-- CTTTGGAATCTTTAGTAGGTTCTCCTTCTTGAGTTTTCTTCTCAGATTCT
FD949343       <-- CTTTGGAATCTTTAGTAGGTTCTCCTTCCTGAGTTTTCTTCTCAGATTCT
FD963725       <-- CTTTGGAATCTTTAGTAGGTTCTCCTTCTTGAGTTTTCTTCTCAGATTCT
FD534486       <-- CTTTGGAATCTTTAGTAGGTTCTCCTTCTTGAGTTTTCTTCTCAGATTCT
EW721879       --> ..................................................
FY439013       --> ..................................................
FD530410       --> ..................................................
FD945000       --> ..................................................
FD582045       --> ..................................................
FD959945       --> ..................................................

               1101   -   1151
UN22999        --> TCTCCTTTTTTCTCATCAGCCTCTACTTTCTTTCCTTCTCCTTCTTTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577797       <-- TCTCCTTTTTTCTCATCAGCCTCTACTTTCTTTCCTTCTCCTTCTTTTTT
EW718199       <-- TCTCCTTTTTTCTCATCAGCCTCTACTTTCTTTCCTTCTCCTTCTTTTTT
EX758151       <-- TCTCCTTTTTTCTCATCAGCCTCTACTTTCTTTCCTT---CTTCTTTTTT
FD949343       <-- TCTCCTTTTTTCTCATCAGCCTCTACTTTCTTTCCTTCTCCTTCTTTTTT
FD963725       <-- TCTCCTTTTTTCTCATCAGCCTCTACTTTCTTTCCTTCTCCTTCTTTTTT
FD534486       <-- TCTCCTTTTTTCTCATCAGCCTCTACTTTCTTTCCTTCTCCTTCTTTTTT
EW721879       --> ..................................................
FY439013       --> ..................................................
FD530410       --> ..................................................
FD945000       --> ..................................................
FD582045       --> ..................................................
FD959945       --> ..................................................

               1151   -   1201
UN22999        --> CTCCTCTTCTGGTTTCTTTTCCTCCATTTTCTTCTCCTCTGCTGCTTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577797       <-- CTCCTCTTCTGGTTTCTTTTCCTCCATTTTCTTCTCCTCTGCTGCTTCTG
EW718199       <-- CTCCTCTTCTGGTTTCTTTTCCTCCATTTTCTTCTCCTCTGCTGCTTCTG
EX758151       <-- CTCCTCTTCTGGTTTCTTTTCCTCCATTTTCTTCTCCTCTGCTGCTTCTG
FD949343       <-- CTCCTCTTCTGGTTTCTTTTCCTCCATTTTCTTCTCCTCTGCTGCTTCTG
FD963725       <-- CTCCTCTTCTGGTTTCTTTTCCTCCATTTTCTTCTCCTCTGCTGCTTCTG
FD534486       <-- CTCCTCTTCTGGTTTCTTTTCCTCCATTTTCTTCTCCTCTGCTGCTTCTG
EW721879       --> ..................................................
FY439013       --> ..................................................
FD530410       --> ..................................................
FD945000       --> ..................................................
FD582045       --> ..................................................
FD959945       --> ..................................................

               1201   -   1251
UN22999        --> GTTTCTTCTCCTCCTCTCCCATTTTTTGTTTGTTTTGGTTAAGTTTCGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577797       <-- GTTTCTTCTCCTCCTCTCCCATTTTTTGTTTGTTTTGGTTAAGTTTTGAG
EW718199       <-- GTTTCTTCTCCTCCTCTCCCATTTTTTGTTTGTTTTGGTTAAGTTTCGAG
EX758151       <-- GTTTCTTCTCCTCCTCTCCCATTTTTTGTTTGTTTTGGTTAAGTTTTGAG
FD949343       <-- GTTTCTTCTCCTCCTCTCCCATTTTTTGTTTGTTTTGGTTAAGTTTCGAG
FD963725       <-- GTTTCTTCTCCTCCTCTCCCATTTTTTGTTTGTTTTGGTTAAGTTTCGAG
FD534486       <-- GTTTCTT-TCCTCCTCTCCCATTTTTTGTTTGTTTTGGTTAAGTTTCGAG
EW721879       --> ..................................................
FY439013       --> ..................................................
FD530410       --> ..................................................
FD945000       --> ..................................................
FD582045       --> ..................................................
FD959945       --> ..................................................

               1251   -   1301
UN22999        --> TGTTTCTATGTTCACAGAAAAATGTAACGCCCAGAGAGAAGCTTATAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577797       <-- TGTTTCTATGTTCcc...................................
EW718199       <-- TGTTTCTATGTTCACc..................................
EX758151       <-- TGTTTCTATGTTCACAGAAAAATGTAACGCCCAGAGAGAAGCTTATAAAT
FD949343       <-- TGTTTCTATGTTCcc...................................
FD963725       <-- TGTTTCTATGTTCACcc.................................
FD534486       <-- TGTTTCTATGTTCcc...................................
EW721879       --> ..................................................
FY439013       --> ..................................................
FD530410       --> ..................................................
FD945000       --> ..................................................
FD582045       --> ..................................................
FD959945       --> ..................................................

               1301   -   1351
UN22999        --> CTCTCTCTCTTTCTAAAGAACCACTTGGGTGTTGTGGTACCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577797       <-- ..........................................
EW718199       <-- ..........................................
EX758151       <-- CTCTCTCTCTTTCTAAAGAACCACTTGGGTGTTGTGGTACCC
FD949343       <-- ..........................................
FD963725       <-- ..........................................
FD534486       <-- ..........................................
EW721879       --> ..........................................
FY439013       --> ..........................................
FD530410       --> ..........................................
FD945000       --> ..........................................
FD582045       --> ..........................................
FD959945       --> ..........................................